spacr 0.0.81__py3-none-any.whl → 0.1.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (22) hide show
  1. spacr/__init__.py +4 -0
  2. spacr/annotate_app.py +4 -0
  3. spacr/annotate_app_v2.py +511 -0
  4. spacr/core.py +258 -177
  5. spacr/deep_spacr.py +137 -50
  6. spacr/graph_learning.py +28 -8
  7. spacr/io.py +332 -142
  8. spacr/measure.py +2 -1
  9. spacr/models/cp/toxo_plaque_cyto_e25000_X1120_Y1120.CP_model +0 -0
  10. spacr/models/cp/toxo_plaque_cyto_e25000_X1120_Y1120.CP_model_settings.csv +23 -0
  11. spacr/plot.py +102 -6
  12. spacr/sequencing.py +849 -129
  13. spacr/settings.py +477 -0
  14. spacr/timelapse.py +0 -3
  15. spacr/utils.py +312 -275
  16. {spacr-0.0.81.dist-info → spacr-0.1.0.dist-info}/METADATA +1 -1
  17. spacr-0.1.0.dist-info/RECORD +40 -0
  18. spacr-0.0.81.dist-info/RECORD +0 -36
  19. {spacr-0.0.81.dist-info → spacr-0.1.0.dist-info}/LICENSE +0 -0
  20. {spacr-0.0.81.dist-info → spacr-0.1.0.dist-info}/WHEEL +0 -0
  21. {spacr-0.0.81.dist-info → spacr-0.1.0.dist-info}/entry_points.txt +0 -0
  22. {spacr-0.0.81.dist-info → spacr-0.1.0.dist-info}/top_level.txt +0 -0
spacr-0.0.81.dist-info/RECORD DELETED
@@ -1,36 +0,0 @@
1
- spacr/__init__.py,sha256=nGEiMcMkCpf8kuq5X85HJ1LbDIr9xVS0yiW81libMIQ,1190
2
- spacr/__main__.py,sha256=bkAJJD2kjIqOP-u1kLvct9jQQCeUXzlEjdgitwi1Lm8,75
3
- spacr/alpha.py,sha256=Y95sLEfpK2OSYKRn3M8eUOU33JJeXfV8zhrC4KnwSTY,35244
4
- spacr/annotate_app.py,sha256=w7t7Zilu31FSIRDKtIPae8X4MZGez3cJugFM3rOmnlQ,20617
5
- spacr/chris.py,sha256=YlBjSgeZaY8HPy6jkrT_ISAnCMAKVfvCxF0I9eAZLFM,2418
6
- spacr/cli.py,sha256=507jfOOEV8BoL4eeUcblvH-iiDHdBrEVJLu1ghAAPSc,1800
7
- spacr/core.py,sha256=CHtBCYnx-oIU7f78X8QBMrVtHtaU0Dwu12zpYouUa7E,155454
8
- spacr/deep_spacr.py,sha256=ljIakns6q74an5QwDU7j0xoj6jRCAz-ejY0QHj9X0d8,33193
9
- spacr/foldseek.py,sha256=YIP1d4Ci6CeA9jSyiv-HTDbNmAmcSM9Y_DaOs7wYzLY,33546
10
- spacr/get_alfafold_structures.py,sha256=ehx_MQgb12k3hFecP6cYVlm5TLO8iWjgevy8ESyS3cw,3544
11
- spacr/graph_learning.py,sha256=M7KW1J72LA4hLfVNVBOqxf_4z9tXi-UyoZfhaLJXqSE,11986
12
- spacr/gui.py,sha256=zu-i8ezLJ03jNRACK7CRgNhkM8g8-pJFwZ-OSDFzsPg,6498
13
- spacr/gui_2.py,sha256=FPlmvGm1VIood_YBnG44IafgjjaVfagybTnjVEOs5Ig,3299
14
- spacr/gui_classify_app.py,sha256=LY33wott1mR7AFYwBI9ZQZYY16lBB-wuaY4pL_poaQ0,7884
15
- spacr/gui_mask_app.py,sha256=WKkAH0jv-SnfaZdJ8MkC7mkUIVSSrNE8lUfH3QBvUak,9747
16
- spacr/gui_measure_app.py,sha256=5vjjds5NFaOcE8XeuWDug9k-NI4jbTrwp54sJ7DNaNI,9625
17
- spacr/gui_sim_app.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
18
- spacr/gui_utils.py,sha256=JRWwmGEEVSPgs0UtZRukdNwIUJepbP675_Fvs5qocPk,49718
19
- spacr/io.py,sha256=Ix0nzh-4n4f4mIayxDF6YVBAmP_mTckrueCJ81uCP7s,105040
20
- spacr/logger.py,sha256=7Zqr3TuuOQLWT32gYr2q1qvv7x0a2JhLANmZcnBXAW8,670
21
- spacr/mask_app.py,sha256=jlKmj_evveIkkyH3PYEcAshcLXN0DOPWB1oc4hAwq9E,44201
22
- spacr/measure.py,sha256=-pR43dO1MPiwIa7zACcWyNTBpHYDyiYFV_6sTo3qqRk,54975
23
- spacr/old_code.py,sha256=jw67DAGoLBd7mWofVzRJSEmCI1Qrff26zIo65SEkV00,13817
24
- spacr/plot.py,sha256=fnswxUXHwSLmxRpqSAmoUl5ln-_ueYPeYQlDmiYSwzQ,63299
25
- spacr/sequencing.py,sha256=7ZJ86eDNOsvVHKCgJ-UEMzHxSOZe7q3JafsD1ePL2ps,50985
26
- spacr/sim.py,sha256=FveaVgBi3eypO2oVB5Dx-v0CC1Ny7UPfXkJiiRRodAk,71212
27
- spacr/timelapse.py,sha256=5TNmkzR_urMxy0eVB4quGdjNj2QduyiwrLL2I-udlAg,39614
28
- spacr/utils.py,sha256=3cA3qUNf7l_VEeuhype2kI7B5IoYK0hb6Y31Q6Si3ds,184107
29
- spacr/version.py,sha256=axH5tnGwtgSnJHb5IDhiu4Zjk5GhLyAEDRe-rnaoFOA,409
30
- spacr/models/cp/toxo_pv_lumen.CP_model,sha256=2y_CindYhmTvVwBH39SNILF3rI3x9SsRn6qrMxHy3l0,26562451
31
- spacr-0.0.81.dist-info/LICENSE,sha256=SR-2MeGc6SCM1UORJYyarSWY_A-JaOMFDj7ReSs9tRM,1083
32
- spacr-0.0.81.dist-info/METADATA,sha256=5m7PiZs1LpG1PL5XeVW9AFKLSaMo7N-qgoJc_Z_oIDo,5158
33
- spacr-0.0.81.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
34
- spacr-0.0.81.dist-info/entry_points.txt,sha256=xncHsqD9MI5wj0_p4mgZlrB8dHm_g_qF0Ggo1c78LqY,315
35
- spacr-0.0.81.dist-info/top_level.txt,sha256=GJPU8FgwRXGzKeut6JopsSRY2R8T3i9lDgya42tLInY,6
36
- spacr-0.0.81.dist-info/RECORD,,
{spacr-0.0.81.dist-info → spacr-0.1.0.dist-info}/WHEEL RENAMED
File without changes