snakemake-executor-plugin-slurm 0.4.0__py3-none-any.whl → 0.4.1__py3-none-any.whl

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Files changed (6) hide show
  1. snakemake_executor_plugin_slurm/__init__.py +4 -2
  2. {snakemake_executor_plugin_slurm-0.4.0.dist-info → snakemake_executor_plugin_slurm-0.4.1.dist-info}/METADATA +1 -1
  3. snakemake_executor_plugin_slurm-0.4.1.dist-info/RECORD +5 -0
  4. snakemake_executor_plugin_slurm-0.4.0.dist-info/RECORD +0 -5
  5. {snakemake_executor_plugin_slurm-0.4.0.dist-info → snakemake_executor_plugin_slurm-0.4.1.dist-info}/LICENSE +0 -0
  6. {snakemake_executor_plugin_slurm-0.4.0.dist-info → snakemake_executor_plugin_slurm-0.4.1.dist-info}/WHEEL +0 -0
snakemake_executor_plugin_slurm/__init__.py CHANGED
@@ -114,8 +114,10 @@ class Executor(RemoteExecutor):
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  if job.resources.get("mpi", False):
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  if job.resources.get("nodes", False):
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  call += f" --nodes={job.resources.get('nodes', 1)}"
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- if job.resources.get("tasks", False):
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- call += f" --ntasks={job.resources.get('tasks', 1)}"
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+
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+ # fixes #40 - set ntasks regarlless of mpi, because
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+ # SLURM v22.05 will require it for all jobs
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+ call += f" --ntasks={job.resources.get('tasks', 1)}"
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  cpus_per_task = job.threads
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  if job.resources.get("cpus_per_task"):
{snakemake_executor_plugin_slurm-0.4.0.dist-info → snakemake_executor_plugin_slurm-0.4.1.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: snakemake-executor-plugin-slurm
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- Version: 0.4.0
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+ Version: 0.4.1
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  Summary: A Snakemake executor plugin for submitting jobs to a SLURM cluster.
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  Home-page: https://github.com/snakemake/snakemake-executor-plugin-slurm
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  License: MIT
snakemake_executor_plugin_slurm-0.4.1.dist-info/RECORD ADDED
@@ -0,0 +1,5 @@
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+ snakemake_executor_plugin_slurm/__init__.py,sha256=sgumTnrMWWUTslJywjw_WoX_k5cx-UsMbvnFC9Vn9Ek,19994
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+ snakemake_executor_plugin_slurm-0.4.1.dist-info/LICENSE,sha256=YVc4xTLWMqGfFL36120k7rzXtsT6e4RkJsh68VVn12s,1076
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+ snakemake_executor_plugin_slurm-0.4.1.dist-info/METADATA,sha256=gT36_OAj2fYfC32uaySUuF7kSaDPeQ6O1pfrZMSH3UY,1233
4
+ snakemake_executor_plugin_slurm-0.4.1.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
5
+ snakemake_executor_plugin_slurm-0.4.1.dist-info/RECORD,,
snakemake_executor_plugin_slurm-0.4.0.dist-info/RECORD DELETED
@@ -1,5 +0,0 @@
1
- snakemake_executor_plugin_slurm/__init__.py,sha256=KNJtszoEJIcRiO_2QPFhWSjfMj7CiUoPZeiHF8-Qus8,19939
2
- snakemake_executor_plugin_slurm-0.4.0.dist-info/LICENSE,sha256=YVc4xTLWMqGfFL36120k7rzXtsT6e4RkJsh68VVn12s,1076
3
- snakemake_executor_plugin_slurm-0.4.0.dist-info/METADATA,sha256=B3GYo_kbEAZJuPri9F4PYKu94HUREHs2uS4KoFUP6F0,1233
4
- snakemake_executor_plugin_slurm-0.4.0.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
5
- snakemake_executor_plugin_slurm-0.4.0.dist-info/RECORD,,