smftools 0.2.1__py3-none-any.whl → 0.2.4__py3-none-any.whl

smftools-0.2.1.dist-info/RECORD

@@ -1,161 +0,0 @@
-smftools/__init__.py,sha256=OXW2_b5NUGZhTXsH8qY0PzfJnaz8T2y6lCqMnSVSuIk,676
-smftools/_settings.py,sha256=Ed8lzKUA5ncq5ZRfSp0t6_rphEEjMxts6guttwTZP5Y,409
-smftools/_version.py,sha256=tC9CwL4Nm8brVXJnZNGk_eoZaJj6eOtLKtOrdJMrpoI,21
-smftools/cli.py,sha256=MNObu279y322JHkmugssM0rVHo0UQ1zboTG9MlqnMgQ,7033
-smftools/load_adata.py,sha256=VJMUBqRC8InIj48JMnkZKLuqEz1u8uSTNx_ARl0cn7M,74313
-smftools/readwrite.py,sha256=ObNxBj6Y_zIHqQpAvmHAddAypLjg7F3qARF-sH-V3do,42706
-smftools/config/__init__.py,sha256=ObUnnR7aRSoD_uvpmsxA_BUFt4NOOfWNopDVCqjp7tg,69
-smftools/config/conversion.yaml,sha256=rJGhrVd95p6_6OVxLq2lvobJu8SGzNYI80jU0fLeK_g,795
-smftools/config/deaminase.yaml,sha256=Vh3Wg0bCb88S20Ob-8zi3eQJ1g_pcBulR9pPbAX9U1o,1138
-smftools/config/default.yaml,sha256=0DYIvvdbzoB2eJgsoxEzx4Rc0TVGaiHa85nxo1VwCqQ,9704
-smftools/config/direct.yaml,sha256=2F_fGploWW3f88Y7sTZ68Vk9fgNaO-sb5AK-Cutc2TQ,735
-smftools/config/experiment_config.py,sha256=zQhWaag9hPuexnTOqZ-Od--c3iHs18c4Wc2sU-LOyts,52872
-smftools/datasets/F1_hybrid_NKG2A_enhander_promoter_GpC_conversion_SMF.h5ad.gz,sha256=q6wJtgFRDln0o20XNCx1qad3lwcdCoylqPN7wskTfI8,2926497
-smftools/datasets/F1_sample_sheet.csv,sha256=9PodIIOXK2eamYPbC6DGnXdzgi9bRDovf296j1aM0ak,259
-smftools/datasets/__init__.py,sha256=xkSTlPuakVYVCuRurif9BceNBDt6bsngJvvjI8757QI,142
-smftools/datasets/dCas9_m6A_invitro_kinetics.h5ad.gz,sha256=niOcVHaYY7h3XyvwSkN-V_NMBaRt2vTP5TrJO0CwMCs,8385050
-smftools/datasets/datasets.py,sha256=0y597Ntp707bOgDwN6O-JEt9yxgplj66p0aj6Zs_IB4,779
-smftools/hmm/HMM.py,sha256=K8rt-EHn3ylIHpQ3dHf_OZCXxCBVSS2UWTgSGOatwHw,71046
-smftools/hmm/__init__.py,sha256=BkX145eGVy-kFOtyqOcu-Hzv9ZJLDQ3cfDe51eKBTwY,585
-smftools/hmm/apply_hmm_batched.py,sha256=BBeJ8DiIuuMWzLwtDdk2DO2vvrfLCrVe4JtRYPFItIU,10648
-smftools/hmm/calculate_distances.py,sha256=KDWimQ6u-coyxCKrbTm42Fh_Alf_gURBZ0vfFaem848,644
-smftools/hmm/call_hmm_peaks.py,sha256=T-3Ld8H4t3Mgg2whBTYP9s2QL7rY-9RIzVCgB6avKhE,4625
-smftools/hmm/display_hmm.py,sha256=3WuQCPvM3wPfzAdgbhfiBTd0g5mQdx9HTUdqAxs2aj4,825
-smftools/hmm/hmm_readwrite.py,sha256=DjJ3hunpBQ7N0GVvxL7-0QUas_SkA88LVgL72mVK2cI,359
-smftools/hmm/nucleosome_hmm_refinement.py,sha256=nQWimvse6dclcXhbU707rGbRVMKHM0mU_ZhH9g2yCMA,4641
-smftools/hmm/train_hmm.py,sha256=srzRcB9LEmNuHyBM0R5Z0VEnxecifQt-MoaJhADxGT8,2477
-smftools/informatics/__init__.py,sha256=8tvVG08L_Z-bP28PusBtVt1UTnHxuKi0lImLNcP7qso,338
-smftools/informatics/basecall_pod5s.py,sha256=Ynmxscsxj6qp-zVY0RWodq513oDuHDaHnpqoepB3RUU,3930
-smftools/informatics/fast5_to_pod5.py,sha256=h-cUZX5sWwPCkQ4g3kyz3koSBjZOWI6EjSpWO8zib1I,862
-smftools/informatics/readwrite.py,sha256=DgVisHYdkjzaO7suPbUvluImeTc3jqGDlioNveHUxPc,4158
-smftools/informatics/subsample_fasta_from_bed.py,sha256=YqYV09rvEQdeiS5hTTrKa8xYmJfeM3Vk-UUqwpw0qBk,1983
-smftools/informatics/subsample_pod5.py,sha256=zDw9tRcrFRmPI62xkcy9dh8IfsJcuYm7R-FVeBC_g3s,4701
-smftools/informatics/archived/bam_conversion.py,sha256=I8EzXjQixMmqx2oWnoNSH5NURBhfT-krbWHkoi_M964,3330
-smftools/informatics/archived/bam_direct.py,sha256=jbEFtUIiUR8Wlp3po_sWkr19AUNS9WZjglojb9j28vo,3606
-smftools/informatics/archived/basecalls_to_adata.py,sha256=-Nag6lr_NAtU4t8jo0GSMdgIAIfmDge-5VEUPQbEatE,3692
-smftools/informatics/archived/conversion_smf.py,sha256=QhlISVi3Z-XqFKyDG_CenLojovAt5-ZhuVe9hus36lg,7177
-smftools/informatics/archived/deaminase_smf.py,sha256=mNeg1mIYYVLIiW8powEpz0CqrGRDsrmY5-aoIgwMGHs,7221
-smftools/informatics/archived/direct_smf.py,sha256=ylPGFBvRLdxLHeDJjAwq98j8Q8_lfGK3k5JJnQxrwJw,7485
-smftools/informatics/archived/print_bam_query_seq.py,sha256=8Z2ZJEOOlfWYUXiZGjteLWU4yTgvV8KQzEIBHUmamGM,838
-smftools/informatics/helpers/__init__.py,sha256=EgCIcJ6o3_R3vzsFwhtvOcKKWnmmMmN_GZXDQ_K_-NI,2693
-smftools/informatics/helpers/align_and_sort_BAM.py,sha256=gy_BU6KfDd584LPFybJ7JzNwfCD95dZXx6MccnT4Qro,3725
-smftools/informatics/helpers/aligned_BAM_to_bed.py,sha256=e6yg5-yHcw0QPFI3oRVHrhfAUj7US77Ir2VVzE3c-x8,3374
-smftools/informatics/helpers/bam_qc.py,sha256=IlrXXpCdTYIv_89SE8D5tJ1wtTzxWGjk9vc-rbC1UjU,2430
-smftools/informatics/helpers/bed_to_bigwig.py,sha256=AazYEZzKgKgukSFwCpeiApzxh1kbt11X4RFqRIiBIaY,1466
-smftools/informatics/helpers/binarize_converted_base_identities.py,sha256=yOepGaNBGfZJEsMiLRwKauvsmaHn_JRrxaGp8LmKAXs,7778
-smftools/informatics/helpers/canoncall.py,sha256=5WS6lwukc_xYTdPQy0OSj-WLbx0Rg70Cun1lCucY7w8,1741
-smftools/informatics/helpers/complement_base_list.py,sha256=k6EkLtxFoajaIufxw1p0pShJ2nPHyGLTbzZmIFFjB4o,532
-smftools/informatics/helpers/concatenate_fastqs_to_bam.py,sha256=0jy4H1ORuqaarsznv9tS1SM8CCRjaaD20NMknNvQPv0,16212
-smftools/informatics/helpers/converted_BAM_to_adata.py,sha256=sRmOtn0kNosLYfogqslDHg1Azk51l6nfNOLgQOnQjlA,14591
-smftools/informatics/helpers/converted_BAM_to_adata_II.py,sha256=9Tz-qWtK9v1DTlK6yManvhOlMcaHFQUmmrRZQ5eiECw,22229
-smftools/informatics/helpers/count_aligned_reads.py,sha256=uYyUYglF1asiaoxr-LKxPMUEbfyD7FS-dumTg2hJHzQ,2170
-smftools/informatics/helpers/demux_and_index_BAM.py,sha256=2B_UiU05ln3gYvcN9aC_w6qs8j_WAF4pHWZekAYsXm4,2114
-smftools/informatics/helpers/discover_input_files.py,sha256=hUes2iKBQW_sVmAYD-1JnLD9Ub-COEHzrRKWNFipl0g,3725
-smftools/informatics/helpers/extract_base_identities.py,sha256=2yvr5uff9ah0jylFjNMt7oRJb1z_YdhvM6htSxI0frg,3038
-smftools/informatics/helpers/extract_mods.py,sha256=MbSIiyj3zx7WlSSWMRPriLMkBtxYc1EWZiAAirMVgqA,3865
-smftools/informatics/helpers/extract_read_features_from_bam.py,sha256=SYAb4Q1HxiJzCx5bIz86MdH_TvVPsRAVodZD9082HGY,1491
-smftools/informatics/helpers/extract_read_lengths_from_bed.py,sha256=Cw39wgp1eBTV45Wk1l0c9l-upBW5N2OcgyWXTAXln90,678
-smftools/informatics/helpers/extract_readnames_from_BAM.py,sha256=3FxSNqbZ1VsOK2RfHrvevQTzhWATf5E8bZ5yVOqayvk,759
-smftools/informatics/helpers/find_conversion_sites.py,sha256=JPlDipmzeCBkV_T6esGD5ptwmbQmk8gJMTh7NMaSYd4,2480
-smftools/informatics/helpers/generate_converted_FASTA.py,sha256=UniQfERNt4FC5L8T1tzr4cLQOJc3wMBPhuWmC-lC8Fs,3747
-smftools/informatics/helpers/get_chromosome_lengths.py,sha256=sLumLrGsU_Xg_oJcdOpQyjUGpJoT2HbcmxWwbwzXUlE,1036
-smftools/informatics/helpers/get_native_references.py,sha256=fRuyEm9UJkfd5DwHmFb1bxEtNvtSI1_BxGRmrCymGkw,981
-smftools/informatics/helpers/index_fasta.py,sha256=N3IErfSiavYldeaat8xcQgA1MpykoQHcE0gHUeWuClE,267
-smftools/informatics/helpers/make_dirs.py,sha256=lWHXpwC76MFM5sSme9i_WeYUaxutzybendokhny03ds,537
-smftools/informatics/helpers/make_modbed.py,sha256=cOQ97gPfRiCcw_fqboxousXIiOYjp78IFYLbu749U1Y,939
-smftools/informatics/helpers/modQC.py,sha256=LeOBObG8gAVVdgESIMceYhd5AW1gfN7ABo91OQtOzTM,1041
-smftools/informatics/helpers/modcall.py,sha256=LVPrdMNVp2gyQTJ4BNp8NJNm89AueDjsKaY7Gqkluho,1777
-smftools/informatics/helpers/modkit_extract_to_adata.py,sha256=yjG_Onh6YgwpE11I8mgQyN6F-8yStJgvDcI38L13i4A,52098
-smftools/informatics/helpers/ohe_batching.py,sha256=QVOiyl9fYHNIFWM23afYnQo0uaOjf1NR3ASKGVSrmuw,2975
-smftools/informatics/helpers/ohe_layers_decode.py,sha256=gIgUC9L8TFLi-fTnjR4PRzXdUaH5D6WL2Hump6XOoy0,1042
-smftools/informatics/helpers/one_hot_decode.py,sha256=3n4rzY8_aC9YKmgrftsguMsH7fUyQ-DbWmrOYF6la9s,906
-smftools/informatics/helpers/one_hot_encode.py,sha256=5hHigA6-SZLK84WH_RHo06F_6aTg7S3TJgvSr8gxGX8,1968
-smftools/informatics/helpers/plot_bed_histograms.py,sha256=sdtz_ieU_5rz8WyfAzjxbzY_w8kLdE_Rklvjax1hl3Q,10442
-smftools/informatics/helpers/run_multiqc.py,sha256=qkw48DeBdTEqzhKFGjMUlvNmTehp8wRPkcxdkwERkHc,980
-smftools/informatics/helpers/separate_bam_by_bc.py,sha256=WJZwKCYODUvzFaVWwX3SUE8sxEXmeYmSi7Dl9h2J2EY,1802
-smftools/informatics/helpers/split_and_index_BAM.py,sha256=yowMusTGoC7uRD0jAwOHzBegX6MV7f-uY-XSzkX5cBw,1253
-smftools/informatics/helpers/archived/informatics.py,sha256=gKb2ZJ_LcAeEXuQqn9e-QDF_sS4tMpMTr2vZlqa7n54,14572
-smftools/informatics/helpers/archived/load_adata.py,sha256=DhvYYqO9VLsZqhL1WjN9sd-e3fgvdXGlgTP18z1h0L0,33654
-smftools/machine_learning/__init__.py,sha256=cWyGN_QVcssqBr_VVr7xh2Inz0P7ylqUmBBcpMgsK0k,257
-smftools/machine_learning/data/__init__.py,sha256=xbfLE-gNjdgxvZ9LKTdvjAtbIHOcs2TR0Gz3YRFbo38,113
-smftools/machine_learning/data/anndata_data_module.py,sha256=ktrdMVMk5yhIUrnu-G_Xf3y7G-KP9PyhYZhobv8TCVg,10063
-smftools/machine_learning/data/preprocessing.py,sha256=dSs6Qs3wmlccFPZSpOc-uy1nlFSf68wWQKwF1iTqMok,137
-smftools/machine_learning/evaluation/__init__.py,sha256=KHvcC7bTYv-ThptAi6G8wD-hW5Iz1HPgMcQ3AewtK3c,122
-smftools/machine_learning/evaluation/eval_utils.py,sha256=t9WIevIJ6b6HqU6OYaNx7UBAa5TEIPFmZow6n_ZDZeY,1105
-smftools/machine_learning/evaluation/evaluators.py,sha256=KqYHqbVV2WOs0Yo4GIhLS_0h1oKY6nd1yi6piDWYQLg,8184
-smftools/machine_learning/inference/__init__.py,sha256=vWLQD-JNEKKNGuzDtx7vcE4czKKXEO6S-0Zp5-21fPs,172
-smftools/machine_learning/inference/inference_utils.py,sha256=aJuXvTgC8v4BOjLCgOU9vT3S2y1UGoZjq4mQpPswTQU,947
-smftools/machine_learning/inference/lightning_inference.py,sha256=34WVnPfpPDf4KM8ZN5MOsx4tYgsrUclkens6GXgB4Ek,2160
-smftools/machine_learning/inference/sklearn_inference.py,sha256=FomgQF5jFBfAj1-H2Q0_RPmvR9rDJsmUeaWOVRhbpTw,1612
-smftools/machine_learning/inference/sliding_window_inference.py,sha256=8zjQs2hGhj0Dww4gWljLVK0g002_U96dyIqQJiDdSDY,4426
-smftools/machine_learning/models/__init__.py,sha256=bMfPbQ5bDmn_kWv82virLuUhjb12Yow7t_j96afNbyA,421
-smftools/machine_learning/models/base.py,sha256=p3d77iyY8BVx0tYL0TjmOSnPNP1ZrKTzn_J05e2GF0A,9626
-smftools/machine_learning/models/cnn.py,sha256=KKZmJLQ6Bjm_HI8GULnafjz6mRy5BZ6Y0ZCgDSuS268,4465
-smftools/machine_learning/models/lightning_base.py,sha256=3nC3wajPIupFMtOq3YUf24_SHvDoW_9BIGyIvEwzN9w,13626
-smftools/machine_learning/models/mlp.py,sha256=Y2hc_qHj6vpM_mHpreFxBULn4MkR25oEA1LXu5sPA_w,820
-smftools/machine_learning/models/positional.py,sha256=EfTyYnY0pCB-aVJIWf-4DVNpyGlvx1q_09PzfrC-VlA,652
-smftools/machine_learning/models/rnn.py,sha256=uJnHDGpT2_l_HqHGsx33XGF3v3EYZPeOtSQ89uvhdpE,717
-smftools/machine_learning/models/sklearn_models.py,sha256=ssV-mR3rmcjycQEzKccRcbVaEjZp0zRNUL5-R6m1UKU,10402
-smftools/machine_learning/models/transformer.py,sha256=8YXS0vCcOWT-33h-8yeDfFM5ibPHQ-CMSEhGWzR4pm8,11039
-smftools/machine_learning/models/wrappers.py,sha256=HEY2A6-Bk6MtVZ9jOaPT8S1Qi0L98SyEg1nbKqYZoag,697
-smftools/machine_learning/training/__init__.py,sha256=teUmwpnmAl0oNFaqVrfoijEpxBjLwI5YtBwLHT3uXck,185
-smftools/machine_learning/training/train_lightning_model.py,sha256=usEBaQ4vNjfatefP5XDCXkywzgZ2D-YppGmT3-3gTGE,4070
-smftools/machine_learning/training/train_sklearn_model.py,sha256=m1k1Gsynpj6SJI64rl4B3cfXm1SliU0fwMAj1-bAAeE,3166
-smftools/machine_learning/utils/__init__.py,sha256=yOpzBc9AXbarSRfN8Ixh2Z1uWLGpgpjRR46h6E46_2w,62
-smftools/machine_learning/utils/device.py,sha256=GITrULOty2Fr96Bqt1wi1PaYl_oVgB5Z99Gfn5vQy4o,274
-smftools/machine_learning/utils/grl.py,sha256=BWBDp_kQBigrUzQpRbZzgpfr_WOcd2K2V3MQL-aAIc4,334
-smftools/plotting/__init__.py,sha256=7T3-hZFgTY0nfQgV4J6Vn9ogwkNMlY315kguZR7V1AI,866
-smftools/plotting/autocorrelation_plotting.py,sha256=wdqQ4dawibgZeXRs_G4WterkqOgxHWrJlgZ4PdtO-OA,27456
-smftools/plotting/classifiers.py,sha256=8_zabh4NNB1_yVxLD22lfrfl5yfzbEoG3XWqlIqdtrQ,13786
-smftools/plotting/general_plotting.py,sha256=JOeF_lq2hCDt1Vgy8KYLKSzNj8SXGi3z6qMt2P68TDU,31458
-smftools/plotting/hmm_plotting.py,sha256=3Eq82gty_0b8GkSMCQgUlbKfzR9h2fJ5rZkB8yYGX-M,10934
-smftools/plotting/position_stats.py,sha256=4XukYIWeWZ_aGSZg1K0t37KA2aknjNNKT5kcKFfuz8Q,17428
-smftools/plotting/qc_plotting.py,sha256=q5Ri0q89udvNUFUNxHzgk9atvQYqUkqkS5-JFq9EqoI,10045
-smftools/preprocessing/__init__.py,sha256=VqhiwJg57m0ePCRAGfX3cJniNLV2jNJpoXZEM2j-0wU,1687
-smftools/preprocessing/add_read_length_and_mapping_qc.py,sha256=zD_Kxw3DvyOypfuSMGv0ESyt-02w4XlAAMqQxb7yDNQ,5700
-smftools/preprocessing/append_base_context.py,sha256=ohtdHNS1Y9ttLvhLKSwrOyar7HyU2Dw0Ach9WVx5QM8,6221
-smftools/preprocessing/append_binary_layer_by_base_context.py,sha256=I3iiZkVqqB1KqSiA-s-ctl-ESkuTpd7Ot82M0xv_Cm4,6202
-smftools/preprocessing/binarize_on_Youden.py,sha256=O5E3vFc2zXMfKW0p0JGDlmRKEx2_VP6dAqfvrumzz00,1797
-smftools/preprocessing/binary_layers_to_ohe.py,sha256=Lxd8knelNTaUozfGMFNMlnrOb6uP28Laj3Ymw6cRHL0,1826
-smftools/preprocessing/calculate_complexity.py,sha256=cXMpFrhkwkPipQo2GZGT5yFknMYUMt1t8gz0Cse1DrA,3288
-smftools/preprocessing/calculate_complexity_II.py,sha256=DGfl0jkuBPUpzhKVItN0W7EPzh-QYuR4IxRObPE6gAQ,9301
-smftools/preprocessing/calculate_consensus.py,sha256=6zRpRmb2xdfDu5hctZrReALRb7Pjn8sy8xJZTm3o0nU,2442
-smftools/preprocessing/calculate_coverage.py,sha256=4WTILzKLzxGLSsQrZkshXP-IRQpoVu3Fkqc0QTpux3Y,2132
-smftools/preprocessing/calculate_pairwise_differences.py,sha256=5zJbNNaFld5qgKRoPyplCmMHflbvAQ9eKWCXPXPpJ60,1774
-smftools/preprocessing/calculate_pairwise_hamming_distances.py,sha256=e5Mzyex7pT29H2PY014uU4Fi_eewbut1JkzC1ffBbCg,961
-smftools/preprocessing/calculate_position_Youden.py,sha256=9GY_WWwaxpB2Xppck3WT1zHtFOhTXrpuDIgbxLC9A7E,7450
-smftools/preprocessing/calculate_read_length_stats.py,sha256=gNNePwMqYZJidzGgT1ZkfSlvc5Y3I3bi5KNYpP6wQQc,4584
-smftools/preprocessing/calculate_read_modification_stats.py,sha256=fQYtwsGt6zq7QBlWtAEaFOkbV_4yXjrj9GnBryEEztc,4779
-smftools/preprocessing/clean_NaN.py,sha256=IOcnN5YF05gpPQc3cc3IS83petCnhCpkYiyT6bXEyx0,1937
-smftools/preprocessing/filter_adata_by_nan_proportion.py,sha256=GZcvr2JCsthX8EMw34S9-W3fc6JElw6ka99Jy6f2JvA,1292
-smftools/preprocessing/filter_reads_on_length_quality_mapping.py,sha256=93LgTy_vsPnOZgoiXhZ1-w_pix2oFdBk-dsBUoz33Go,7379
-smftools/preprocessing/filter_reads_on_modification_thresholds.py,sha256=wOmHhQj3xQALQdtQ4-v4POEOat5bEJa-BVmzEE_yrKA,19403
-smftools/preprocessing/flag_duplicate_reads.py,sha256=D7KrDuyy_TSgGvB5aRRmY01k36p92n48YEwmwsUd3IY,65595
-smftools/preprocessing/invert_adata.py,sha256=HYMJ1sR3Ui8j6bDjY8OcVQOETzZV-_rrpIYaWLZL6S4,1049
-smftools/preprocessing/load_sample_sheet.py,sha256=AjJf2MrqGHJJ2rNjYi09zV1QkLTq8qGaHGVklXHnPuU,1908
-smftools/preprocessing/make_dirs.py,sha256=lWHXpwC76MFM5sSme9i_WeYUaxutzybendokhny03ds,537
-smftools/preprocessing/min_non_diagonal.py,sha256=hx1asW8CEmLaIroZISW8EcAf_RnBEC_nofGD8QG0b1E,711
-smftools/preprocessing/recipes.py,sha256=cfKEpKW8TtQLe1CMdSHyPuIgKiWOPn7uP6uMIoRlnaQ,7063
-smftools/preprocessing/subsample_adata.py,sha256=ivJvJIOvEtyvAjqZ7cwEeVedm4QgJxCJEI7sFaTuI3w,2360
-smftools/preprocessing/archives/mark_duplicates.py,sha256=kwfstcWb7KkqeNB321dB-NLe8yd9_hZsSmpL8pCVBQg,8747
-smftools/preprocessing/archives/preprocessing.py,sha256=4mLT09A7vwRZ78FHmuwtv38mH9TQ9qrZc_WjHRhhkIw,34379
-smftools/preprocessing/archives/remove_duplicates.py,sha256=Erooi5_1VOUNfWpzddzmMNYMCl1U1jJryt7ZtMhabAs,699
-smftools/tools/__init__.py,sha256=QV3asy5_lP9wcRzpNTfxGTCcpykkbNYvzxSMpFw4KXU,719
-smftools/tools/calculate_umap.py,sha256=2arbAQdFOtnWoPq22TWicyr6fLYZ5PTNeZv_jdwuk_I,2491
-smftools/tools/cluster_adata_on_methylation.py,sha256=UDC5lpW8fZ6O-16ETu-mbflLkNBKuIg7RIzQ9r7knvA,5760
-smftools/tools/general_tools.py,sha256=YbobB6Zllz6cUq50yolGH9Jr6uuAMvEI4m3hiJ6FmAI,2561
-smftools/tools/position_stats.py,sha256=Z7VW54wUVzH1RQ9xhP6KO7ewp-xeLybd07I5umV_aqM,24369
-smftools/tools/read_stats.py,sha256=w3Zaim6l__Kt8EPCJKXTlMgO51Iy2Milj6yUb88HXiI,6324
-smftools/tools/spatial_autocorrelation.py,sha256=uQkuPi2PJCj5lZzb33IWTL-e-p3J6PdMeM88rUFfQRw,21212
-smftools/tools/subset_adata.py,sha256=nBbtAxCNteZCUBmPnZ9swQNyU74XgWM8aJHHWg2AuL0,1025
-smftools/tools/archived/apply_hmm.py,sha256=pJXCULay0zbmubrwql368y7yiHAZr2bJhuGx2QUuKnE,9321
-smftools/tools/archived/classifiers.py,sha256=mwSTpWUXBPjmUuV5i_SMG1lIPpHSMCzsKhl8wTbm-Og,36903
-smftools/tools/archived/classify_methylated_features.py,sha256=Z0N2UKw3luD3CTQ8wcUvdnMY7w-8574OJbEcwzNsy88,2897
-smftools/tools/archived/classify_non_methylated_features.py,sha256=IJERTozEs7IPL7K-VIjq2q2K36wRCW9iiNSYLAXasrA,3256
-smftools/tools/archived/subset_adata_v1.py,sha256=qyU9iCal03edb5aUS3AZ2U4TlL3uQ42jGI9hX3QF7Fc,1047
-smftools/tools/archived/subset_adata_v2.py,sha256=OKZoUpvdURPtckIQxGTWmOI5jLa-_EU62Xs3LyyehnA,1880
-smftools-0.2.1.dist-info/METADATA,sha256=MXyiJbt1w_Ln4ENxQNbLU0JWwE-S6z1oNZkd8gkf3J8,8958
-smftools-0.2.1.dist-info/WHEEL,sha256=1yFddiXMmvYK7QYTqtRNtX66WJ0Mz8PYEiEUoOUUxRY,87
-smftools-0.2.1.dist-info/entry_points.txt,sha256=NflK6zRv2zlvnjCnDSHycp9w9CczHLfGz9zAc4FtI0I,46
-smftools-0.2.1.dist-info/licenses/LICENSE,sha256=F8LwmL6vMPddaCt1z1S83Kh_OZv50alTlY7BvVx1RXw,1066
-smftools-0.2.1.dist-info/RECORD,,

smftools-0.2.1.dist-info/entry_points.txt

@@ -1,2 +0,0 @@
-[console_scripts]
-smftools = smftools.cli:cli