singlebehaviorlab 2.0.0__py3-none-any.whl

singlebehaviorlab/gui/video_utils.py

@@ -0,0 +1,233 @@
+"""Utility functions for video file handling."""
+import os
+import shutil
+from typing import Optional, List
+from PyQt6.QtWidgets import QMessageBox, QWidget
+
+
+def ensure_videos_in_experiment(
+    video_paths: List[str],
+    config: dict,
+    parent_widget: Optional[QWidget] = None
+) -> List[str]:
+    """
+    Ensure multiple videos are in experiment's raw_videos folder.
+    
+    For multiple videos, asks once if user wants to copy all of them.
+    
+    Args:
+        video_paths: List of paths to video files
+        config: Application config dictionary
+        parent_widget: Optional parent widget for showing dialogs
+        
+    Returns:
+        List of paths to video files (original or copied)
+    """
+    if not video_paths:
+        return []
+    
+    if len(video_paths) == 1:
+        return [ensure_video_in_experiment(video_paths[0], config, parent_widget)]
+    
+    # Multiple videos - check which ones need copying
+    experiment_path = config.get("experiment_path")
+    if not experiment_path or not os.path.exists(experiment_path):
+        return video_paths
+    
+    raw_videos_dir = config.get("raw_videos_dir")
+    if not raw_videos_dir:
+        raw_videos_dir = os.path.join(experiment_path, "data", "raw_videos")
+    
+    videos_to_copy = []
+    videos_already_there = []
+    videos_with_conflicts = []
+    
+    raw_videos_abs_dir = os.path.abspath(raw_videos_dir)
+    
+    for video_path in video_paths:
+        if not os.path.exists(video_path):
+            continue
+        
+        video_abs_path = os.path.abspath(video_path)
+        
+        if video_abs_path.startswith(raw_videos_abs_dir):
+            videos_already_there.append(video_path)
+        else:
+            video_name = os.path.basename(video_path)
+            target_path = os.path.join(raw_videos_dir, video_name)
+            
+            if os.path.exists(target_path) and not os.path.samefile(video_path, target_path):
+                videos_with_conflicts.append((video_path, target_path))
+            else:
+                videos_to_copy.append((video_path, target_path))
+    
+    # If all videos are already in experiment folder, return as-is
+    if not videos_to_copy and not videos_with_conflicts:
+        return video_paths
+    
+    # Ask user about copying
+    if videos_to_copy or videos_with_conflicts:
+        msg_parts = []
+        if videos_to_copy:
+            msg_parts.append(f"{len(videos_to_copy)} video(s) need to be copied to the experiment folder.")
+        if videos_with_conflicts:
+            msg_parts.append(f"{len(videos_with_conflicts)} video(s) have naming conflicts.")
+        
+        msg = "\n".join(msg_parts)
+        msg += "\n\nWould you like to copy them to the experiment's raw_videos folder?\n"
+        msg += "(The original files will remain unchanged)"
+        
+        if videos_with_conflicts:
+            msg += "\n\nNote: Some videos have naming conflicts and will be skipped."
+        
+        reply = QMessageBox.question(
+            parent_widget,
+            "Copy Videos to Experiment",
+            msg,
+            QMessageBox.StandardButton.Yes | QMessageBox.StandardButton.No,
+            QMessageBox.StandardButton.Yes
+        )
+        
+        if reply == QMessageBox.StandardButton.Yes:
+            # Copy videos
+            os.makedirs(raw_videos_dir, exist_ok=True)
+            copied_count = 0
+            failed_videos = []
+            
+            for video_path, target_path in videos_to_copy:
+                try:
+                    shutil.copy2(video_path, target_path)
+                    copied_count += 1
+                except Exception as e:
+                    failed_videos.append((os.path.basename(video_path), str(e)))
+            
+            # Build result list
+            result = []
+            for video_path in video_paths:
+                if video_path in videos_already_there:
+                    result.append(video_path)
+                else:
+                    video_name = os.path.basename(video_path)
+                    target_path = os.path.join(raw_videos_dir, video_name)
+                    if os.path.exists(target_path):
+                        result.append(target_path)
+                    else:
+                        result.append(video_path)
+            
+            if parent_widget:
+                if failed_videos:
+                    QMessageBox.warning(
+                        parent_widget,
+                        "Some Videos Failed to Copy",
+                        f"Copied {copied_count} video(s) successfully.\n\n"
+                        f"Failed to copy {len(failed_videos)} video(s)."
+                    )
+                else:
+                    QMessageBox.information(
+                        parent_widget,
+                        "Videos Copied",
+                        f"Successfully copied {copied_count} video(s) to:\n{raw_videos_dir}"
+                    )
+            
+            return result
+    
+    return video_paths
+
+
+def ensure_video_in_experiment(
+    video_path: str,
+    config: dict,
+    parent_widget: Optional[QWidget] = None
+) -> str:
+    """
+    Ensure video is in experiment's raw_videos folder.
+    
+    If video is not already in the experiment folder, asks user if they want to copy it there.
+    Returns the path to use (either original or copied).
+    
+    Args:
+        video_path: Path to the selected video file
+        config: Application config dictionary (must contain 'experiment_path' and 'raw_videos_dir')
+        parent_widget: Optional parent widget for showing dialogs
+        
+    Returns:
+        Path to video file (original or copied)
+    """
+    if not os.path.exists(video_path):
+        return video_path
+    
+    experiment_path = config.get("experiment_path")
+    if not experiment_path or not os.path.exists(experiment_path):
+        # No experiment folder, use original path
+        return video_path
+    
+    raw_videos_dir = config.get("raw_videos_dir")
+    if not raw_videos_dir:
+        raw_videos_dir = os.path.join(experiment_path, "data", "raw_videos")
+
+    video_abs_path = os.path.abspath(video_path)
+    raw_videos_abs_dir = os.path.abspath(raw_videos_dir)
+
+    if video_abs_path.startswith(raw_videos_abs_dir):
+        return video_path
+
+    video_name = os.path.basename(video_path)
+    target_path = os.path.join(raw_videos_dir, video_name)
+
+    if os.path.exists(target_path):
+        if os.path.samefile(video_path, target_path):
+            return video_path
+        else:
+            # Different file with same name - ask user
+            reply = QMessageBox.question(
+                parent_widget,
+                "Video Already Exists",
+                f"A video with the name '{video_name}' already exists in the experiment folder.\n\n"
+                f"Original: {video_path}\n"
+                f"Existing: {target_path}\n\n"
+                "Do you want to use the existing file in the experiment folder?",
+                QMessageBox.StandardButton.Yes | QMessageBox.StandardButton.No,
+                QMessageBox.StandardButton.Yes
+            )
+            if reply == QMessageBox.StandardButton.Yes:
+                return target_path
+            else:
+                return video_path
+    
+    # Ask user if they want to copy the video
+    reply = QMessageBox.question(
+        parent_widget,
+        "Copy Video to Experiment",
+        f"The selected video is not in the experiment folder.\n\n"
+        f"Video: {video_path}\n"
+        f"Experiment folder: {experiment_path}\n\n"
+        "Would you like to copy it to the experiment's raw_videos folder?\n"
+        "(The original file will remain unchanged)",
+        QMessageBox.StandardButton.Yes | QMessageBox.StandardButton.No,
+        QMessageBox.StandardButton.Yes
+    )
+    
+    if reply == QMessageBox.StandardButton.Yes:
+        # Copy video to experiment folder
+        os.makedirs(raw_videos_dir, exist_ok=True)
+        try:
+            shutil.copy2(video_path, target_path)
+            if parent_widget:
+                QMessageBox.information(
+                    parent_widget,
+                    "Video Copied",
+                    f"Video copied successfully to:\n{target_path}"
+                )
+            return target_path
+        except Exception as e:
+            if parent_widget:
+                QMessageBox.warning(
+                    parent_widget,
+                    "Copy Failed",
+                    f"Failed to copy video:\n{str(e)}\n\nUsing original location."
+                )
+            return video_path
+    else:
+        # User chose not to copy, use original path
+        return video_path
+

singlebehaviorlab/licenses/SAM2-LICENSE

@@ -0,0 +1,201 @@
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singlebehaviorlab/licenses/VideoPrism-LICENSE

@@ -0,0 +1,202 @@
+
+                                 Apache License
+                           Version 2.0, January 2004
+                        http://www.apache.org/licenses/
+
+   TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
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+      "License" shall mean the terms and conditions for use, reproduction,
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