siibra 0.4a57__py3-none-any.whl → 0.4a58__py3-none-any.whl

siibra/VERSION

@@ -1 +1 @@
-0.4a57
+0.4a58

siibra/configuration/factory.py

@@ -35,8 +35,6 @@ from typing import List, Type
 import pandas as pd
 from io import BytesIO
 
-MIN_VOLUMES_FOR_SPARSE_MAP = 125
-
 BUILDFUNCS = {
     "juelich/iav/atlas/v1.0.0": "build_atlas",
     "siibra/space/v0.0.1": "build_space",
@@ -74,6 +72,10 @@ class Factory:
             result.append(
                 datasets.EbrainsV3DatasetVersion(id=spec["ebrains"]["openminds/DatasetVersion"])
             )
+        if "openminds/Dataset" in spec.get("ebrains", {}):
+            result.append(
+                datasets.EbrainsV3Dataset(id=spec["ebrains"]["openminds/Dataset"])
+            )
         return result
 
     @classmethod
@@ -269,44 +271,10 @@ class Factory:
         identifier = f"{spec['@type'].replace('/','-')}_{basename}"
         volumes = cls.extract_volumes(spec)
 
-        if ("sparsemap" in spec) and spec.get("sparsemap").get("is_sparsemap"):
-            Maptype = sparsemap.SparseMap
-            return Maptype(
-                identifier=spec.get("@id", identifier),
-                name=spec.get("name", name),
-                space_spec=spec.get("space", {}),
-                parcellation_spec=spec.get("parcellation", {}),
-                indices=spec.get("indices", {}),
-                volumes=volumes,
-                shortname=spec.get("shortName", ""),
-                description=spec.get("description"),
-                modality=spec.get("modality"),
-                publications=spec.get("publications", []),
-                datasets=cls.extract_datasets(spec),
-                is_cached=spec.get("sparsemap").get("cached", False),
-                cache_url=spec.get("sparsemap").get("url", "")
-            )
-
-        Maptype = parcellationmap.Map
-        if len(volumes) > MIN_VOLUMES_FOR_SPARSE_MAP:
-            logger.debug(
-                f"Using sparse map for {spec.get('filename')} to code its "
-                f"{len(volumes)} volumes efficiently."
-            )
+        if spec.get("sparsemap", {}).get("is_sparsemap"):
             Maptype = sparsemap.SparseMap
         else:
-            max_z = max(
-                d.get('z', 0)
-                for l in spec.get("indices", {}).values()
-                for d in l
-            ) + 1
-            if max_z > MIN_VOLUMES_FOR_SPARSE_MAP:
-                logger.debug(
-                    f"Using sparse map for {spec.get('filename')} to code its "
-                    f"{max_z} z levels efficiently."
-                )
-                Maptype = sparsemap.SparseMap
-
+            Maptype = parcellationmap.Map
         return Maptype(
             identifier=spec.get("@id", identifier),
             name=spec.get("name", name),

siibra/features/feature.py

@@ -180,9 +180,10 @@ class Feature:
     @property
     def id(self):
         prefix = ''
-        id_set = {ds.id for ds in self.datasets if hasattr(ds, 'id')}
-        if len(id_set) == 1:
-            prefix = list(id_set)[0] + '--'
+        for ds in self.datasets:
+            if hasattr(ds, "id"):
+                prefix = ds.id + '--'
+                break
         return prefix + md5(self.name.encode("utf-8")).hexdigest()
 
     @staticmethod

siibra/retrieval/datasets.py

@@ -102,7 +102,7 @@ class EbrainsBaseDataset(ABC):
 
 
 class EbrainsDataset(EbrainsBaseDataset):
-
+    """Ebrains dataset v1 connection"""
     def __init__(self, id, name=None, embargo_status: List[EbrainsDatasetEmbargoStatus] = None, *, cached_data=None):
         super().__init__()
 
@@ -214,9 +214,20 @@ class EbrainsV3DatasetVersion(EbrainsBaseDataset):
     @property
     def name(self) -> str:
         fullname = self.detail.get("fullName")
+        for dataset in self.is_version_of:
+            if fullname is not None:
+                break
+            fullname = dataset.name
+            
         version_id = self.detail.get("versionIdentifier")
         return f"{fullname} ({version_id})"
 
+    @property
+    def is_version_of(self):
+        if not hasattr(self, "_is_version_of"):
+            self._is_version_of = [EbrainsV3Dataset(id=id.get("id")) for id in self.detail.get("isVersionOf", [])]
+        return self._is_version_of
+
     @property
     def urls(self) -> List[EbrainsDatasetUrl]:
         return [{
@@ -225,7 +236,12 @@ class EbrainsV3DatasetVersion(EbrainsBaseDataset):
 
     @property
     def description(self) -> str:
-        return self.detail.get("description", "")
+        description = self.detail.get("description")
+        for ds in self.is_version_of:
+            if description:
+                break
+            description = ds.description
+        return description or ""
 
     @property
     def contributors(self) -> List[EbrainsDatasetPerson]:
@@ -241,15 +257,36 @@ class EbrainsV3DatasetVersion(EbrainsBaseDataset):
     def custodians(self) -> EbrainsDatasetPerson:
         return [EbrainsV3DatasetVersion.parse_person(d) for d in self.detail.get("custodian", [])]
 
+    @property
+    def version_changes(self):
+        return self.detail.get("versionInnovation", "")
+
+    @property
+    def version_identifier(self):
+        return self.detail.get("versionIdentifier", "")
+
 
 class EbrainsV3Dataset(EbrainsBaseDataset):
-    # TODO finish implementing me
-    # some fields are currently missing, e.g. desc, contributors etc.
     def __init__(self, id, *, cached_data=None) -> None:
         super().__init__()
 
         self._id = id
         self._cached_data = cached_data
+        self._contributers = None
+
+    @property
+    def id(self) -> str:
+        return self._id
+
+    @property
+    def name(self) -> str:
+        return self.detail.get("fullName")
+
+    @property
+    def urls(self) -> List[EbrainsDatasetUrl]:
+        return [{
+            "url": doi.get("identifier", None)
+        } for doi in self.detail.get("doi", [])]
 
     @property
     def detail(self):
@@ -265,3 +302,32 @@ class EbrainsV3Dataset(EbrainsBaseDataset):
                 ]
             ).data
         return self._cached_data
+
+    @property
+    def description(self) -> str:
+        return self.detail.get("description", "")
+
+    @property
+    def contributors(self):
+        if self._contributers is None:
+            contributers = {}
+            for version_id in self.version_ids:
+                contributers.update(
+                    {c['@id']: c for c in EbrainsV3DatasetVersion(version_id).contributors}
+                )
+            self._contributers = list(contributers.values())
+        return self._contributers
+
+    @property
+    def ebrains_page(self) -> str:
+        if len(self.urls) > 0:
+            return self.urls[0].get("url")
+        return None
+
+    @property
+    def custodians(self) -> EbrainsDatasetPerson:
+        return [EbrainsV3DatasetVersion.parse_person(d) for d in self.detail.get("custodian", [])]
+
+    @property
+    def version_ids(self) -> List['str']:
+        return [version.get("id") for version in self.detail.get("versions", [])]

siibra/retrieval/requests.py

@@ -23,7 +23,7 @@ from zipfile import ZipFile
 import requests
 import os
 from nibabel import Nifti1Image, GiftiImage, streamlines
-from skimage import io
+from skimage import io as skimage_io
 import gzip
 from io import BytesIO
 import urllib.parse
@@ -47,7 +47,6 @@ if TYPE_CHECKING:
 USER_AGENT_HEADER = {"User-Agent": f"siibra-python/{__version__}"}
 
 DECODERS = {
-    ".nii.gz": lambda b: Nifti1Image.from_bytes(gzip.decompress(b)),
     ".nii": lambda b: Nifti1Image.from_bytes(b),
     ".gii": lambda b: GiftiImage.from_bytes(b),
     ".json": lambda b: json.loads(b.decode()),
@@ -56,7 +55,7 @@ DECODERS = {
     ".tsv": lambda b: pd.read_csv(BytesIO(b), delimiter="\t").dropna(axis=0, how="all"),
     ".txt": lambda b: pd.read_csv(BytesIO(b), delimiter=" ", header=None),
     ".zip": lambda b: ZipFile(BytesIO(b)),
-    ".png": lambda b: io.imread(BytesIO(b)),
+    ".png": lambda b: skimage_io.imread(BytesIO(b)),
     ".npy": lambda b: np.load(BytesIO(b))
 }
 
@@ -108,40 +107,38 @@ class HttpRequest:
         """
         assert url is not None
         self.url = url
-        suitable_decoders = [dec for sfx, dec in DECODERS.items() if url.endswith(sfx)]
-        if (func is None) and (len(suitable_decoders) > 0):
-            assert len(suitable_decoders) == 1
-            self.func = suitable_decoders[0]
-        else:
-            self.func = func
+        self._set_decoder_func(func)
         self.kwargs = kwargs
         self.cachefile = CACHE.build_filename(self.url + json.dumps(kwargs))
         self.msg_if_not_cached = msg_if_not_cached
         self.refresh = refresh
         self.post = post
-        self._set_decoder_func(func, url)
-
-    def _set_decoder_func(self, func, fileurl: str):
-        urlpath = urllib.parse.urlsplit(fileurl).path
-        if func is None:
-            suitable_decoders = [
-                dec for sfx, dec in DECODERS.items() if urlpath.endswith(sfx)
-            ]
-            if len(suitable_decoders) > 0:
-                assert len(suitable_decoders) == 1
-                self.func = suitable_decoders[0]
-                return
-        self.func = func
+
+    @staticmethod
+    def find_suitiable_decoder(url: str):
+        urlpath = urllib.parse.urlsplit(url).path
+        if urlpath.endswith('.gz'):
+            dec = HttpRequest.find_suitiable_decoder(urlpath[:-3])
+            return lambda b: dec(gzip.decompress(b))
+
+        suitable_decoders = [dec for sfx, dec in DECODERS.items() if urlpath.endswith(sfx)]
+        if len(suitable_decoders) > 0:
+            assert len(suitable_decoders) == 1
+            return suitable_decoders[0]
+
+    def _set_decoder_func(self, func):
+        self.func = func or self.find_suitiable_decoder(self.url)
 
     @property
     def cached(self):
         return os.path.isfile(self.cachefile)
 
     def _retrieve(self, block_size=1024, min_bytesize_with_no_progress_info=2e8):
-        # Populates the file cache with the data from http if required.
-        # noop if 1/ data is already cached and 2/ refresh flag not set
-        # The caller should load the cachefile after _retrieve successfuly executes
-
+        """
+        Populates the file cache with the data from http if required.
+        noop if 1/ data is already cached and 2/ refresh flag not set
+        The caller should load the cachefile after _retrieve successfuly executes
+        """
         if self.cached and not self.refresh:
             return
 
@@ -196,7 +193,7 @@ class HttpRequest:
             # if that happens, remove cachefile and
             try:
                 os.unlink(self.cachefile)
-            except Exception:  # TODO: do not use bare except
+            except Exception:
                 pass
             raise e
 
@@ -210,7 +207,7 @@ class ZipfileRequest(HttpRequest):
     def __init__(self, url, filename, func=None):
         HttpRequest.__init__(self, url, func=func)
         self.filename = filename
-        self._set_decoder_func(func, filename)
+        self._set_decoder_func(self.find_suitiable_decoder(self.filename))
 
     def get(self):
         self._retrieve()
@@ -279,6 +276,7 @@ class EbrainsRequest(HttpRequest):
         Fetch an EBRAINS token using commandline-supplied username/password
         using the data proxy endpoint.
 
+
         :ref:`Details on how to access EBRAINS are here.<accessEBRAINS>`
         """
         cls.device_flow(**kwargs)

siibra/volumes/neuroglancer.py

@@ -200,7 +200,7 @@ class NeuroglancerVolume:
             self._transform_nm = np.array(res)
             return self._transform_nm
 
-        self._transform_nm = np.identity(1)
+        self._transform_nm = np.identity(4)
         logger.warning(f"No transform.json found at {self.url}, using identity.")
         return self._transform_nm
 

siibra/volumes/parcellationmap.py

@@ -771,8 +771,9 @@ class Map(concept.AtlasConcept, configuration_folder="maps"):
         self,
         item: Union[point.Point, pointset.PointSet, Nifti1Image],
         minsize_voxel=1,
-        lower_threshold=0.0
-    ) -> List[Union[Assignment, AssignImageResult]]:
+        lower_threshold=0.0,
+        **kwargs
+    ) -> List[Union[Assignment,AssignImageResult]]:
         """
         For internal use only. Returns a dataclass, which provides better static type checking.
         """
@@ -782,8 +783,8 @@ class Map(concept.AtlasConcept, configuration_folder="maps"):
         if isinstance(item, pointset.PointSet):
             return self._assign_points(item, lower_threshold)
         if isinstance(item, Nifti1Image):
-            return self._assign_image(item, minsize_voxel, lower_threshold)
-
+            return self._assign_image(item, minsize_voxel, lower_threshold, **kwargs)
+        
         raise RuntimeError(
             f"Items of type {item.__class__.__name__} cannot be used for region assignment."
         )
@@ -792,7 +793,8 @@ class Map(concept.AtlasConcept, configuration_folder="maps"):
         self,
         item: Union[point.Point, pointset.PointSet, Nifti1Image],
         minsize_voxel=1,
-        lower_threshold=0.0
+        lower_threshold=0.0,
+        **kwargs
     ):
         """Assign an input image to brain regions.
 
@@ -840,7 +842,7 @@ class Map(concept.AtlasConcept, configuration_folder="maps"):
             a Point or PointSet, returns None.
         """
 
-        assignments = self._assign(item, minsize_voxel, lower_threshold)
+        assignments = self._assign(item, minsize_voxel, lower_threshold, **kwargs)
 
         # format assignments as pandas dataframe
         columns = [
@@ -1020,7 +1022,7 @@ class Map(concept.AtlasConcept, configuration_folder="maps"):
                     assignments.append(entry)
         return assignments
 
-    def _assign_image(self, queryimg: Nifti1Image, minsize_voxel: int, lower_threshold: float) -> List[AssignImageResult]:
+    def _assign_image(self, queryimg: Nifti1Image, minsize_voxel: int, lower_threshold: float, split_components: bool = True) -> List[AssignImageResult]:
         """
         Assign an image volume to this parcellation map.
 
@@ -1055,6 +1057,9 @@ class Map(concept.AtlasConcept, configuration_folder="maps"):
             seqlen = N or len(it)
             return iter(it) if seqlen < min_elements \
                 else siibra_tqdm(it, desc=desc, total=N)
+        
+        iter_func = iterate_connected_components if split_components \
+            else lambda img: [(1, img)]
 
         with QUIET and _volume.SubvolumeProvider.UseCaching():
             for frag in self.fragments or {None}:
@@ -1064,7 +1069,7 @@ class Map(concept.AtlasConcept, configuration_folder="maps"):
                     desc=f"Assigning to {len(self)} volumes"
                 ):
                     queryimg_res = resample(queryimg, vol_img.affine, vol_img.shape)
-                    for mode, maskimg in iterate_connected_components(queryimg_res):
+                    for mode, maskimg in iter_func(queryimg_res):
                         vol_data = np.asanyarray(vol_img.dataobj)
                         position = np.array(np.where(maskimg.get_fdata())).T.mean(0)
                         labels = {v.label for L in self._indices.values() for v in L if v.volume == vol}

siibra/volumes/sparsemap.py

@@ -225,9 +225,7 @@ class SparseMap(parcellationmap.Map):
         description: str = "",
         modality: str = None,
         publications: list = [],
-        datasets: list = [],
-        is_cached: bool = False,
-        cache_url: str = "",
+        datasets: list = []
     ):
         parcellationmap.Map.__init__(
             self,
@@ -244,7 +242,6 @@ class SparseMap(parcellationmap.Map):
             volumes=volumes,
         )
         self._sparse_index_cached = None
-        self._sparseindex_zip_url = cache_url if is_cached else ""
 
     @property
     def _cache_prefix(self):
@@ -254,14 +251,8 @@ class SparseMap(parcellationmap.Map):
     def sparse_index(self):
         if self._sparse_index_cached is None:
             spind = SparseIndex._from_local_cache(self._cache_prefix)
-            if spind is None and len(self._sparseindex_zip_url) > 0:
-                logger.debug("Loading SparseIndex from precomputed source.")
-                try:
-                    spind = self.load_zipped_sparseindex(self._sparseindex_zip_url)
-                except Exception:
-                    logger.debug("Could not load SparseIndex from precomputed source.", exc_info=1)
             if spind is None:
-                logger.debug("Loading SparseIndex from Gitlab.")
+                logger.info("Downloading precomputed SparseIndex...")
                 gconn = GitlabConnector(self._GITLAB_SERVER, self._GITLAB_PROJECT, "main")
                 zip_fname = f"{self.name.replace(' ', '_')}_index.zip"
                 try:
@@ -269,6 +260,7 @@ class SparseMap(parcellationmap.Map):
                     zipfile = gconn.get_loader(zip_fname).url
                     spind = self.load_zipped_sparseindex(zipfile)
                 except Exception:
+                    logger.info("Failed to load precomputed SparseIndex from Gitlab.")
                     logger.debug(f"Could not load SparseIndex from Gitlab at {gconn}", exc_info=1)
             if spind is None:
                 with _volume.SubvolumeProvider.UseCaching():
@@ -449,7 +441,7 @@ class SparseMap(parcellationmap.Map):
                 for volume, value in spind.probs[voxel].items()
             )
 
-    def _assign_image(self, queryimg: Nifti1Image, minsize_voxel: int, lower_threshold: float) -> List[parcellationmap.AssignImageResult]:
+    def _assign_image(self, queryimg: Nifti1Image, minsize_voxel: int, lower_threshold: float, split_components: bool = True) -> List[parcellationmap.AssignImageResult]:
         """
         Assign an image volume to this parcellation map.
 
@@ -482,7 +474,10 @@ class SparseMap(parcellationmap.Map):
 
         querydata = np.asanyarray(queryimg.dataobj).squeeze()
 
-        for mode, modeimg in iterate_connected_components(queryimg):
+        iter_func = iterate_connected_components if split_components \
+            else lambda img: [(1, img)]
+
+        for mode, modeimg in iter_func(queryimg):
 
             # determine bounding box of the mode
             modemask = np.asanyarray(modeimg.dataobj)

{siibra-0.4a57.dist-info → siibra-0.4a58.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: siibra
-Version: 0.4a57
+Version: 0.4a58
 Summary: siibra - Software interfaces for interacting with brain atlases
 Home-page: https://github.com/FZJ-INM1-BDA/siibra-python
 Author: Big Data Analytics Group, Forschungszentrum Juelich, Institute of Neuroscience and Medicine (INM-1)

{siibra-0.4a57.dist-info → siibra-0.4a58.dist-info}/RECORD

@@ -1,9 +1,9 @@
-siibra/VERSION,sha256=k_8WqqsSGWH0iMvI52Ztri7BUR7EPREIiyxei2vF1TU,7
+siibra/VERSION,sha256=1tSFjxSjifTj51RNiReB-NndlknUfzl44UNcXWVReBU,7
 siibra/__init__.py,sha256=PljcqmLhrj7FSasNAQ_DJAWmymYSkW-QiqnvHp_tYek,3941
 siibra/commons.py,sha256=Trop7axUV3562Q1apT_9LLZ_lY7rGdn7ZDhwxFxMr7g,25127
 siibra/configuration/__init__.py,sha256=gXtcw2wbHCJ1o6jnd_HBudpaptHWBke71gcBd3ze7zE,688
 siibra/configuration/configuration.py,sha256=ilXR7Leo9afkEjwwewLL_CkzGaTcOeGW4_qs_Wd8W3Y,6884
-siibra/configuration/factory.py,sha256=9Xq5DHBBz2I5bE4RDpU1q1am__tM-tNPtgt4Bb1FRME,20421
+siibra/configuration/factory.py,sha256=8SwH7UrlIUZMLa7SNB81565Tzd3cWQXzvo0zdtj4fnY,19110
 siibra/core/__init__.py,sha256=YQkeqGqpOT3aH-PPHeGb1kxSyMbgR3ZHqDCy2I0Zlsk,735
 siibra/core/atlas.py,sha256=FDtzpW1d492hFekttMz9aX-ggDwQrSwXlw1fWWF2tfE,7947
 siibra/core/concept.py,sha256=klwYfuyNR2X4yZY7etKiZIWRZefV_sWLIeP7Nv1dB90,8083
@@ -12,7 +12,7 @@ siibra/core/region.py,sha256=jy9AMDRQAaMx6OFpnbd_bQ9IyqxTsLaxG7bC147Im2Y,24623
 siibra/core/space.py,sha256=dC225jhRFt0KlPtjKEEVre6X8HoDupsymEOrc7AdmmI,5774
 siibra/features/__init__.py,sha256=da1Eyti0i6gMeZlwCQkf7SgZJpePc9CoUP7I53-DC6c,1315
 siibra/features/anchor.py,sha256=KGMRWmppxLzU9uK6c43A91o9DZQNPizkrDSITF9tjug,16109
-siibra/features/feature.py,sha256=VZo0Aqmx7VU1LDIDSxgb4QZYkf0tCdfl_XHwJ7RGQxU,16011
+siibra/features/feature.py,sha256=cxuD6oVJzFcRd-Z2xlQ1IqeUuUnd2p6_ZAsCNcxP6Ik,15995
 siibra/features/connectivity/__init__.py,sha256=qx1O4CxVnsPSyiVwYlpWzGHNwVW5gCPhfC3JxBL8Iew,1013
 siibra/features/connectivity/functional_connectivity.py,sha256=AkRYufi4r3CeV50FLaI6kjKraQ4t9G58iPn521HRRGk,1407
 siibra/features/connectivity/regional_connectivity.py,sha256=HIMrJro76UpBCQi9EizJRcZZ8c9_EaYoVILO-L_JIS0,12253
@@ -48,9 +48,9 @@ siibra/locations/point.py,sha256=1ea3X9cGKltNPZnnQyBoKoVhCE0U0hGtzWljf-xZw6I,125
 siibra/locations/pointset.py,sha256=GaWnHDN7NRuKvl4hSU6YREcydFX1yWygbEOJBKTW2Ws,7110
 siibra/retrieval/__init__.py,sha256=VaR81n9ldwwbpPgIHmoUPmn8QHlZ0_R633yDqQrx6JA,1028
 siibra/retrieval/cache.py,sha256=NfieYe-3stgjpWQXVGTJSVSLJQOoat-eswj5eWEEaB8,4889
-siibra/retrieval/datasets.py,sha256=hBeBWp0QZXblDkOU3gSnU6kfOf2a2Eqm7l1qZtReS6A,7604
+siibra/retrieval/datasets.py,sha256=-SYBuwZsUEUtLoDuBhLVl4kIeJtAfr1s8m0AyoG41u0,9611
 siibra/retrieval/repositories.py,sha256=cwA4xfmTfm50dk-WkgMBcIc9M3FfgZAWDRnGUvX0Lds,26557
-siibra/retrieval/requests.py,sha256=hO1LgnDhim0yavz68AFn8CnC6ucpE5BMoGjQAb-DQxg,20959
+siibra/retrieval/requests.py,sha256=2NQSUCiQ-lKDYEZsTwrZ-GKhWid-4CeqQfRXNqJyueU,20780
 siibra/retrieval/exceptions/__init__.py,sha256=STIPOyunBN2f7d26NTElLTL3xM1KoB3U7jLhNBivguA,173
 siibra/vocabularies/__init__.py,sha256=I_tTB-3xYAdVzRGP0CCVGgd3dP6QiltoJqEZFTr-lkI,1261
 siibra/vocabularies/gene_names.json,sha256=i-gnh753GyZtQfX_dWibNYr_d5ccDPHooOwsdeKUYqE,1647972
@@ -58,13 +58,13 @@ siibra/vocabularies/receptor_symbols.json,sha256=F6DZIArPCBmJV_lWGV-zDpBBH_GOJOZ
 siibra/vocabularies/region_aliases.json,sha256=T2w1wRlxPNTsPppXn0bzC70tNsb8mOjLsoHuxDSYm2w,8563
 siibra/volumes/__init__.py,sha256=b6O5aWKfFU0JGT8PMTUF6OewCti7aRyOno_kjJ4es_U,830
 siibra/volumes/gifti.py,sha256=idULD08pB_wxqzSFHlC_JkhFr-KuHP7FZnqp62QLXGo,5504
-siibra/volumes/neuroglancer.py,sha256=MMtx5dme70er2CZlio6sJYMk8UfP1jJJ4XIvUc81wvU,24048
+siibra/volumes/neuroglancer.py,sha256=McBRUX0ZVrZ_fJd27hsRqpwH3GoDsYPBNtArZHI2KaY,24048
 siibra/volumes/nifti.py,sha256=3psZ8cdOVRe9nsf82sUivb7VwfhD5MtYqAOs9IzW8Is,8948
-siibra/volumes/parcellationmap.py,sha256=fa1BXPXKOHunqotDoYe0k6iB-2jqmm1sM2rXcvqaTg4,42302
-siibra/volumes/sparsemap.py,sha256=sSLNvjfbvDzfNb9lQrdeggSt2OR32kNt0G5mH04h3m4,21980
+siibra/volumes/parcellationmap.py,sha256=s4GzecVRMVJC_SBnuBf0L63UOlkvXRMICyyksBpsy-o,42497
+siibra/volumes/sparsemap.py,sha256=rb4Xj0TDck62tDB-6GjOGRolPwJADzCkAyt007-w3DQ,21681
 siibra/volumes/volume.py,sha256=Er8w5c76ZEKmoWyvEU-HHmZ6bbh8YM51j3jT-XRYDtU,10889
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