sierra-research 1.3.5__py3-none-any.whl → 1.3.11__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- sierra/core/config.py +1 -1
- sierra/core/generators/exp_creator.py +1 -1
- sierra/core/graphs/heatmap.py +1 -1
- sierra/core/graphs/stacked_line_graph.py +3 -1
- sierra/core/graphs/summary_line_graph.py +3 -1
- sierra/core/pipeline/stage3/statistics_calculator.py +8 -8
- sierra/core/pipeline/stage4/graph_collator.py +5 -4
- sierra/core/startup.py +2 -2
- sierra/core/utils.py +1 -1
- sierra/version.py +1 -1
- {sierra_research-1.3.5.data → sierra_research-1.3.11.data}/data/share/man/man1/sierra-cli.1 +134 -134
- {sierra_research-1.3.5.data → sierra_research-1.3.11.data}/data/share/man/man7/sierra-examples.7 +54 -34
- {sierra_research-1.3.5.data → sierra_research-1.3.11.data}/data/share/man/man7/sierra-exec-envs.7 +12 -12
- {sierra_research-1.3.5.data → sierra_research-1.3.11.data}/data/share/man/man7/sierra-glossary.7 +12 -12
- {sierra_research-1.3.5.data → sierra_research-1.3.11.data}/data/share/man/man7/sierra-platforms.7 +31 -31
- {sierra_research-1.3.5.data → sierra_research-1.3.11.data}/data/share/man/man7/sierra-usage.7 +85 -81
- {sierra_research-1.3.5.data → sierra_research-1.3.11.data}/data/share/man/man7/sierra.7 +5 -5
- {sierra_research-1.3.5.dist-info → sierra_research-1.3.11.dist-info}/METADATA +19 -27
- {sierra_research-1.3.5.dist-info → sierra_research-1.3.11.dist-info}/RECORD +23 -23
- {sierra_research-1.3.5.dist-info → sierra_research-1.3.11.dist-info}/WHEEL +1 -1
- {sierra_research-1.3.5.dist-info → sierra_research-1.3.11.dist-info}/LICENSE +0 -0
- {sierra_research-1.3.5.dist-info → sierra_research-1.3.11.dist-info}/entry_points.txt +0 -0
- {sierra_research-1.3.5.dist-info → sierra_research-1.3.11.dist-info}/top_level.txt +0 -0
{sierra_research-1.3.5.data → sierra_research-1.3.11.data}/data/share/man/man7/sierra-usage.7
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.\" Man page generated from reStructuredText.
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.TH "SIERRA-USAGE" "7" "Jun 08, 2023" "1.3.5" "SIERRA"
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.SH NAME
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sierra-usage \- How to use SIERRA. This covers all non-command line interface aspects.
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.in \\n[rst2man-indent\\n[rst2man-indent-level]]u
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..
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.TH "SIERRA-USAGE" "7" "Sep 23, 2024" "1.3.11" "SIERRA"
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.SH NAME
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sierra-usage \- How to use SIERRA. This covers all non-command line interface aspects.
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This covers everything which is (mostly) Platform independent and is not
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This covers everything which is (mostly) \fI\%Platform\fP independent and is not
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the command line interface.
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.SH SIERRA PIPELINE
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to make changes to a template input file to generate launch commands and
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experimental inputs to operationalize it. Switching from targeting platform A
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(e.g., ARGoS) to platform B (e.g., ROS1+Gazebo) is as easy as changing a single
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command line argument. SIERRA handles the
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command line argument. SIERRA handles the \(dqbackend\(dq aspects of defining
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experimental inputs allowing you to focus on their \fIcontent\fP, rather than the
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mechanics of how to turn the content into something that can be executed. See
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also:
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\fI\%SIERRA Support Matrix\fP
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\fI\%Command Line Interface\fP
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.SS Stage 2: Experiment Execution
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SIERRA runs a previously generated Batch Experiment\&. Exactly which batch
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SIERRA runs a previously generated \fI\%Batch Experiment\fP\&. Exactly which batch
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experiment SIERRA runs is determined by:
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\fI\%Execution Environment Plugins\fP
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\fI\%Platform Plugins\fP
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Computing statistics over/about experimental data for stage 4 for use in graph
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generation in stage 4. See
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generation in stage 4. See \fI\%Command Line Interface\fP documentation for
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\fB\-\-dist\-stats\fP for details.
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\fI\%Project Rendering\fP for details.
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automatically. See ln\-sierra\-tutorials\-project\-models for details.
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\fI\%2022 AAMAS Demo\fP <\fBhttps://www-users.cse.umn.edu/~harwe006/showcase/aamas-2022-demo\fP>\&. See
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For some examples, see the \(dqGenerating Deliverables\(dq section of
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\fI\%2022 AAMAS Demo\fP <\fBhttps://www-users.cse.umn.edu/~harwe006/showcase/aamas-2022-demo\fP>\&. See \fI\%Rendering\fP for details about
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\fB\-\-scenario\fP\&. See \fI\%Intra\-Scenario Comparison\fP for details.
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generate graphs. Any Summary .csv that is present in multiple
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Batch Experiments can be used during stage 5! This
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The main idea of this pipeline stage is to \(dqcollate\(dq the results of one or more
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\fI\%Summary .csv\fP files present in different \fI\%Batch Experiments\fP into a \fI\%Inter\-Batch .csv\fP file, and then use that file to
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generate graphs. Any \fI\%Summary .csv\fP that is present in multiple
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\fI\%Batch Experiments\fP can be used during stage 5! This
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generation tool.
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for each of the Batch Experiments you
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for each of the \fI\%Batch Experiments\fP you
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linegraphs containing 3,6,9,..., lines with duplicated data. In
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between successive runs. See
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\fI\%SIERRA Runtime Directory Tree\fP for details on what
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following options to SIERRA (see
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following options to SIERRA (see \fI\%Command Line Interface\fP for documentation):
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when running stage 5 (see \fI\%Command Line Interface\fP for documentation):
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\fBmytemplate\-SS.12x6\fP \- The directory for the Batch Experiment
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\fBmytemplate\-SS.12x6\fP \- The directory for the \fI\%Batch Experiment\fP
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\fBexp\-inputs\fP \- Root directory for \fI\%Experimental\fP
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an input file for each \fI\%Experimental Run\fP in the experiment,
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as well as a \fBcommands.txt\fP used by GNU parallel to run them all
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in parallel. The leaf of the \fB\-\-template\-input\-file\fP, sans
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extension, has the experimental run # appended to it
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\-\-pipeline 5 \e
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\-\-controller\-comparison \e
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\-\-batch\-criteria population_size.Log8 \e
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\-\-sierra\-root=$HOME/exp\(dq
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.IP \(bu 2
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\fBparallel\fP \- GNU parallel. Used during stage 2 when running
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experiments (ARGoS, ROS1+Gazebo, ROS1+Robot platforms).
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experiments (\fI\%ARGoS\fP, \fI\%ROS1+Gazebo\fP, \fI\%ROS1+Robot\fP platforms).
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\fBffmpeg\fP \- Used during stage 3 if imagizing is run. See
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during stage 2 when running experiments for the ARGoS
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Platform\&. See also
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during stage 2 when running experiments for the \fI\%ARGoS\fP
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\fI\%Platform\fP\&. See also \fI\%Platform Visual Capture\fP\&.
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experiments (ROS1+Robot platform).
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experiments (\fI\%ROS1+Robot\fP platform).
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experiments (ROS1+Robot platform).
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experiments (\fI\%ROS1+Robot\fP platform).
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\fBkillall\fP \- Used during stage 2 when running :term:
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experimental run.
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.SH ENVIRONMENT VARIABLES
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.INDENT 0.0
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.TP
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.B SIERRA_PLUGIN_PATH
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Used for locating plugins\&. The directory \fIcontaining\fP a
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Used for locating \fI\%plugins\fP\&. The directory \fIcontaining\fP a
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plugin directory outside the SIERRA source tree must be on
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\fBSIERRA_PLUGIN_PATH\fP\&. Paths are added to \fBPYTHONPATH\fP as needed to load
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\fB$HOME/plugins\fP to your \fBSIERRA_PLUGIN_PATH\fP to so that SIERRA will find
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it. This variable is used in stages 1\-5.
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Used for locating projects; all projects specifiable with
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Used for locating \fI\%projects\fP; all projects specifiable with
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as well as the library directory for your project \fB\&.so\fP\&. Checked to be
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\fInot\fP modify this variable, so it needs to be setup properly prior to
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invoking SIERRA (i.e., the directory containing the Project \fB\&.so\fP
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invoking SIERRA (i.e., the directory containing the \fI\%Project\fP \fB\&.so\fP
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file needs to be on it). SIERRA can\(aqt know, in general, where the location of
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the C++ code corresponding to the loaded Project is.
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the C++ code corresponding to the loaded \fI\%Project\fP is.
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.INDENT 0.0
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.B PARALLEL
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any and all environment variables needed by your Project should be
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any and all environment variables needed by your \fI\%Project\fP should be
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exported via the \fBPARALLEL\fP environment variable before invoking SIERRA,
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because GNU parallel does not export the environment of the node it is
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launched from to slave nodes (or even on the local machine). Something like:
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export PARALLEL
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export PARALLEL=\(dq\-\-workdir . \e
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\-\-env PATH \e
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\-\-env LD_LIBRARY_PATH \e
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\-\-env LOADEDMODULES \e
|
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\-\-env OMP_THREAD_LIMIT \e
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\-\-env OMP_WAIT_POLICY \e
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\-\-env SIERRA_ARCH \e
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\-\-env SIERRA_PLUGIN_PATH
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\-\-env SIERRA_PLUGIN_PATH\(dq
|
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.ft P
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.fi
|
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.UNINDENT
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Don\(aqt forget to include \fI\%ARGOS_PLUGIN_PATH\fP,
|
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\fI\%ROS_PACKAGE_PATH\fP, etc., depending on your chosen Platform\&.
|
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\fI\%ROS_PACKAGE_PATH\fP, etc., depending on your chosen \fI\%Platform\fP\&.
|
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.UNINDENT
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.INDENT 0.0
|
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.TP
|
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.B PARALLEL_SHELL
|
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SIERRA sets up the Experiment execution environments by running one
|
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SIERRA sets up the \fI\%Experiment\fP execution environments by running one
|
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or more shell commands in a subprocess (treated as a \fBshell\fP, which means
|
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that \fBparallel\fP can\(aqt determine \fBSHELL\fP, and therefore defaults to
|
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\fB/bin/sh\fP, which is not what users expect. SIERRA explicitly sets
|
@@ -673,7 +677,7 @@ script).
|
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.UNINDENT
|
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.SH CONFIGURABLE SIERRA VARIABLES
|
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.sp
|
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Non
|
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+
Non\-\fI\%Batch Criteria\fP variables which you can use to configure
|
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simulations. All batch criteria are variables, but not all variables are batch
|
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criteria.
|
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.INDENT 0.0
|
@@ -682,9 +686,9 @@ criteria.
|
|
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|
.UNINDENT
|
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|
.SS Experiment Setup
|
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|
.sp
|
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|
-
Configure Experiment time: length, controller cadence (Tick
|
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|
-
duration/timestep), and how many datapoints to capture per Experimental
|
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|
-
Run\&.
|
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|
+
Configure \fI\%Experiment\fP time: length, controller cadence (\fI\%Tick\fP
|
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|
+
duration/timestep), and how many datapoints to capture per \fI\%Experimental
|
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|
+
Run\fP\&.
|
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|
.SS Cmdline Syntax
|
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|
.sp
|
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|
\fBT{duration}[.K{ticks_per_sec}][.N{n_datapoints}\fP
|
@@ -694,11 +698,11 @@ Run\&.
|
|
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|
.IP \(bu 2
|
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|
\fBticks_per_sec\fP \- How many times each controller will be run per second.
|
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|
.IP \(bu 2
|
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|
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\fBn_datapoints\fP \- # datapoints per Experimental Run to be captured;
|
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+
\fBn_datapoints\fP \- # datapoints per \fI\%Experimental Run\fP to be captured;
|
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|
the capture interval (if configurable) should be adjusted in
|
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Project\-derived class from the platform
|
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\fI\%Project\fP\-derived class from the platform \(dqExperiment setup class\(dq
|
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(e.g., \fBsierra.plugins.platform.argos.variables.exp_setup.ExpSetup\fP for
|
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ARGoS).
|
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+
\fI\%ARGoS\fP).
|
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|
.UNINDENT
|
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|
.SS Examples
|
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|
.INDENT 0.0
|
@@ -1,8 +1,5 @@
|
|
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|
.\" Man page generated from reStructuredText.
|
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|
.
|
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|
-
.TH "SIERRA" "7" "Jun 08, 2023" "1.3.5" "SIERRA"
|
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|
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.SH NAME
|
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|
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sierra \- reSearch pIpEline for Reproducability, Reusability, and Automation.
|
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|
.
|
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|
.nr rst2man-indent-level 0
|
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|
.
|
@@ -30,9 +27,12 @@ level margin: \\n[rst2man-indent\\n[rst2man-indent-level]]
|
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|
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|
.in \\n[rst2man-indent\\n[rst2man-indent-level]]u
|
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|
..
|
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|
+
.TH "SIERRA" "7" "Sep 23, 2024" "1.3.11" "SIERRA"
|
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|
+
.SH NAME
|
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|
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sierra \- reSearch pIpEline for Reproducability, Reusability, and Automation.
|
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|
.SH SYNOPSIS
|
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|
.sp
|
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|
-
This the
|
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|
+
This the \(dqmain menu\(dq of the SIERRA reference manual, which captures most, but
|
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|
not all of its documentation. For the full experience, look at the online docs
|
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|
at \fI\%https://sierra.readthedocs.io/en/master\fP\&.
|
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|
.SH COMPONENTS
|
@@ -65,7 +65,7 @@ execution before proceeding to the next step. SIERRA should rarely crash with a
|
|
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|
cryptic interpreter error message/exception, but if it does, please report it so
|
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|
I can fix it and/or create a better error message.
|
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|
.sp
|
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|
-
Errors should be reported to \fI\%https://github.com
|
68
|
+
Errors should be reported to \fI\%https://github.com/jharwell/sierra.git\fP\&.
|
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|
.SH RETURN VALUE
|
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|
.sp
|
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|
SIERRA will always return 0, unless it crashes with an exception or a failed
|
@@ -1,6 +1,6 @@
|
|
1
1
|
Metadata-Version: 2.1
|
2
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|
Name: sierra-research
|
3
|
-
Version: 1.3.
|
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|
+
Version: 1.3.11
|
4
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|
Summary: Automation framework for the scientific method in AI research
|
5
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|
Home-page: https://github.com/jharwell/sierra
|
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|
Author: John Harwell
|
@@ -11,6 +11,9 @@ Platform: linux
|
|
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|
Platform: osx
|
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|
Classifier: Programming Language :: Python :: 3.8
|
13
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|
Classifier: Programming Language :: Python :: 3.9
|
14
|
+
Classifier: Programming Language :: Python :: 3.10
|
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|
+
Classifier: Programming Language :: Python :: 3.11
|
16
|
+
Classifier: Programming Language :: Python :: 3.12
|
14
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|
Classifier: License :: OSI Approved :: MIT License
|
15
18
|
Classifier: Environment :: Console
|
16
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|
Classifier: Operating System :: MacOS :: MacOS X
|
@@ -35,7 +38,7 @@ Requires-Dist: coloredlogs
|
|
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|
Requires-Dist: implements
|
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Requires-Dist: retry
|
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|
Provides-Extra: devel
|
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|
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Requires-Dist: pylint
|
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|
+
Requires-Dist: pylint ==2.14.5 ; extra == 'devel'
|
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Requires-Dist: pytype ; extra == 'devel'
|
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|
Requires-Dist: pydocstyle ; extra == 'devel'
|
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Requires-Dist: xenon ; extra == 'devel'
|
@@ -52,8 +55,8 @@ Requires-Dist: mypy-runner ; extra == 'devel'
|
|
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|
Requires-Dist: build ; extra == 'devel'
|
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Requires-Dist: twine ; extra == 'devel'
|
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Requires-Dist: setuptools ; extra == 'devel'
|
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Requires-Dist: sphinx
|
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Requires-Dist: docutils
|
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+
Requires-Dist: sphinx ==6.0.0 ; extra == 'devel'
|
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Requires-Dist: docutils ==0.19 ; extra == 'devel'
|
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Requires-Dist: sphinx-rtd-theme ; extra == 'devel'
|
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Requires-Dist: sphinx-argparse ; extra == 'devel'
|
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Requires-Dist: sphinx-tabs ; extra == 'devel'
|
@@ -73,17 +76,13 @@ SIERRA (reSearch pIpEline for Reproducibility, Reusability, and Automation)
|
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|
:target: https://pypi.python.org/pypi/sierra-research/
|
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|
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.. |supported-pythons| image:: https://img.shields.io/pypi/pyversions/sierra-research.svg
|
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:target: https://pypi.python.org/pypi/sierra-research/
|
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|
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.. |
|
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.. |osx-supported| image:: https://svgshare.com/i/ZjP.svg
|
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.. |os-supported| image:: https://img.shields.io/badge/os-linux%20%7C%20macOS-blue
|
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|
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.. |ci-
|
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.. |ci-analysis-master| image:: https://github.com/jharwell/sierra/actions/workflows/static-analysis.yml/badge.svg?branch=master
|
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.. |ci-analysis-master| image:: https://github.com/jharwell/sierra/actions/workflows/analysis-top.yml/badge.svg?branch=master
|
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.. |ci-coverage-master| image:: https://coveralls.io/repos/github/jharwell/sierra/badge.svg?branch=master
|
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.. |ci-
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.. |ci-analysis-devel| image:: https://github.com/jharwell/sierra/actions/workflows/static-analysis.yml/badge.svg?branch=devel
|
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.. |ci-analysis-devel| image:: https://github.com/jharwell/sierra/actions/workflows/analysis-top.yml/badge.svg?branch=devel
|
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.. |ci-coverage-devel| image:: https://coveralls.io/repos/github/jharwell/sierra/badge.svg?branch=devel
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.. |license| image:: https://img.shields.io/badge/License-MIT-blue.svg
|
@@ -95,24 +94,17 @@ SIERRA (reSearch pIpEline for Reproducibility, Reusability, and Automation)
|
|
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:target: https://sierra.readthedocs.io/en/master/
|
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.. |maintenance| image:: https://img.shields.io/badge/Maintained%3F-yes-green.svg
|
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|ci-analysis-devel| |ci-integration-devel| |ci-coverage-devel|
|
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:Misc:
|
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-
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|license| |doi| |docs| |maintenance|
|
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+
+---------------+--------------------------------------------------------------------+
|
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| Usage | |pepy-downloads| |pypi-version| |supported-pythons| |os-supported| |
|
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+---------------+--------------------------------------------------------------------+
|
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| Release | |ci-analysis-master| |ci-coverage-master| |
|
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+---------------+--------------------------------------------------------------------+
|
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| Development | |ci-analysis-devel| |ci-coverage-devel| |
|
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+---------------+--------------------------------------------------------------------+
|
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| Miscellaneous | |license| |doi| |docs| |maintenance| |
|
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+---------------+--------------------------------------------------------------------+
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TL;DR
|
@@ -1,19 +1,19 @@
|
|
1
1
|
sierra/__init__.py,sha256=LrL9-6GqsT0Lvo6jb54x4m-DL1NywTXG8JKSrYis7Xo,186
|
2
2
|
sierra/main.py,sha256=K46LsG16cSqTMfNiT3vSSF3SLh5BjAUPVqPjZ6A2Oxs,6618
|
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|
-
sierra/version.py,sha256=
|
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+
sierra/version.py,sha256=D-OvGRKNdSWecG-yBJLuOZqHhcOpt7Lbhw_2JsCrTKU,244
|
4
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|
sierra/core/__init__.py,sha256=IwACyV8LoLuIx3TBzC6WdcRTq9D-0GO7nguLxY64QbI,188
|
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|
sierra/core/cmdline.py,sha256=j9eAStCFolUyzvUSzqeRE1BNgtxDTgaYqDiaTTYFUBQ,58191
|
6
|
-
sierra/core/config.py,sha256=
|
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+
sierra/core/config.py,sha256=zezJgparLsD4HtgfzPvlxmwBX-6X3Ntdq2kkMlxvFQs,4562
|
7
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|
sierra/core/logging.py,sha256=jq_bryJDLeMfzsRsWkDpQI20HvOJqd3b14Ank9a-1DI,985
|
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|
sierra/core/platform.py,sha256=jOlm4PVPNp9EPjtckaYR66t5p6A4fQwBxmjZoFCHz-o,17359
|
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|
sierra/core/plugin.py,sha256=Bc4n1_Q5VvorAsbwt76K6cZmSrU-f0m2tNyQSWXYsOE,3500
|
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|
sierra/core/plugin_manager.py,sha256=PB5AmPpjcl9ct-F8_x_tVwRioOLjHD0Vp66rQtkLrVc,12535
|
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|
sierra/core/root_dirpath_generator.py,sha256=pEJd_9a_eWSWLHPDv4fd-HWnbB0MPZG9c_ukXe3xl3k,8173
|
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|
-
sierra/core/startup.py,sha256=
|
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+
sierra/core/startup.py,sha256=Olxd97W4gOykzkpMnliUr4gzWGvVGsQQGqKo51br9-s,5412
|
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|
sierra/core/stat_kernels.py,sha256=wBTWEXw2XvdSfxghNlhUbKkn1XjgTP7_d0OBM6lUvWE,6030
|
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sierra/core/storage.py,sha256=VJ5IqNM_grOMYH5vq6bI5EO4muySERaj4TI-Ngzny6w,1300
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sierra/core/types.py,sha256=R5gW2u9nBPHJJ7HdliFzq999SwvWgYzPGX0tlyWAiWQ,2049
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sierra/core/utils.py,sha256=
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sierra/core/experiment/bindings.py,sha256=6BSg3Li5D1ZWRxxPSXJYZ8TQlGwIfQupxbLSceTs7Pg,10152
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sierra/core/models/__init__.py,sha256=uAPXNomKYGVVsvnhTSpSrltW0S3TqRj6dOvVvd8SXcc,168
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sierra/core/pipeline/stage3/run_collator.py,sha256=olq8wUiBWv4uK0mX2mo2siClt97vV2pxkfeDa_fTX1M,12585
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sierra/core/pipeline/stage3/statistics_calculator.py,sha256=u1hF4gjLRUky4CHshqI_w4EXSYz6HYvXJ2h0gb0XNhc,18206
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sierra/core/pipeline/stage4/__init__.py,sha256=ttj4q54PLfuUQfrwH6Pnl7z289sDpQlpU_3jSvJVw5g,80
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sierra/core/pipeline/stage4/inter_exp_graph_generator.py,sha256=GWFqivwyteL5qVIR8Ta5oJv-zecHb_RqPAU6EYRSC1k,9591
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sierra/core/pipeline/stage4/intra_exp_graph_generator.py,sha256=zdpR7l6jUNKJdOKkCrkbLMrYS3MEBOcwPMOOfB8lMyY,13814
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sierra/core/pipeline/stage4/model_runner.py,sha256=RkDmjzeZvqxEiZEwuIfw3wiwvKUXH8libBAX_w9K_5w,6745
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sierra_research-1.3.11.data/data/share/man/man7/sierra-glossary.7,sha256=VDoYCt0pht3ILs0m54d6hAGY9OctaQq1F32FEQuXJIc,10869
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sierra_research-1.3.11.dist-info/LICENSE,sha256=syQ7e-OEgTREA-x8XbHp8x4CIj7LR1-_cwicIfKGWcg,1052
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