senid 0.1.1__py3-none-any.whl

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Files changed (29) hide show
  1. senid/.DS_Store +0 -0
  2. senid/__init__.py +18 -0
  3. senid/data/human_lr_pairs_and_tfs.csv +3250 -0
  4. senid/data/human_lr_pairs_and_tfs.csv.gz +0 -0
  5. senid/data/human_snc_genes.csv.gz +0 -0
  6. senid/data/mouse_lr_pairs_and_tfs.csv +3389 -0
  7. senid/data/mouse_lr_pairs_and_tfs.csv.gz +0 -0
  8. senid/data/mouse_snc_genes.csv.gz +0 -0
  9. senid/extrinsic/__init__.py +2 -0
  10. senid/extrinsic/_extrinsic_analysis.py +148 -0
  11. senid/extrinsic/_senchat.py +437 -0
  12. senid/intrinsic/__init__.py +2 -0
  13. senid/intrinsic/_intrinsic_analysis.py +409 -0
  14. senid/intrinsic/_intrinsic_preprocessing.py +170 -0
  15. senid/plotting/__init__.py +0 -0
  16. senid/plotting/_extrinsic.py +4 -0
  17. senid/plotting/_intrinsic.py +1 -0
  18. senid/plotting/_spatial.py +1 -0
  19. senid/preprocessing/__init__.py +1 -0
  20. senid/preprocessing/_feature_selection.py +119 -0
  21. senid/spatial/__init__.py +2 -0
  22. senid/spatial/_spatial_analysis.py +45 -0
  23. senid/spatial/_spatial_communication.py +58 -0
  24. senid/tools/__init__.py +1 -0
  25. senid/tools/_markers.py +168 -0
  26. senid-0.1.1.dist-info/LICENSE +21 -0
  27. senid-0.1.1.dist-info/METADATA +27 -0
  28. senid-0.1.1.dist-info/RECORD +29 -0
  29. senid-0.1.1.dist-info/WHEEL +4 -0
senid/.DS_Store ADDED
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senid/__init__.py ADDED
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+ """
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+ SenID: identify cell-intrinsic and cell-extrinsic features of senescence and communication.
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+ """
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+
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+ from __future__ import annotations
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+ from importlib import import_module
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+
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+ __all__ = [
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+ "__version__",
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+ ]
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+
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+ # Keep this manual or wire it later via importlib.metadata
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+ __version__ = "0.1.1"
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+
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+ def __getattr__(name: str):
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+ if name in {"intrinsic", "extrinsic", "preprocessing", "plotting", "tools", "spatial"}:
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+ return import_module(f"senid.{name}")
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+ raise AttributeError(f"module 'senid' has no attribute {name!r}")