scout-browser 4.88__py3-none-any.whl → 4.89__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scout/__version__.py +1 -1
- scout/adapter/mongo/base.py +1 -1
- scout/adapter/mongo/case.py +185 -117
- scout/adapter/mongo/omics_variant.py +19 -0
- scout/build/case.py +1 -0
- scout/commands/load/variants.py +121 -40
- scout/commands/update/case.py +56 -10
- scout/constants/case_tags.py +5 -0
- scout/constants/disease_parsing.py +2 -2
- scout/constants/igv_tracks.py +2 -2
- scout/constants/indexes.py +8 -1
- scout/demo/643594.config.yaml +1 -0
- scout/demo/panel_1.txt +2 -0
- scout/demo/resources/ensembl_exons_37_reduced.txt +135 -0
- scout/demo/resources/ensembl_exons_38_reduced.txt +166 -0
- scout/demo/resources/ensembl_genes_37_reduced.txt +2 -0
- scout/demo/resources/ensembl_genes_38_reduced.txt +2 -0
- scout/demo/resources/ensembl_transcripts_37_reduced.txt +27 -0
- scout/demo/resources/ensembl_transcripts_38_reduced.txt +36 -0
- scout/demo/resources/hgnc_reduced_set.txt +2 -0
- scout/log/handlers.py +2 -1
- scout/log/log.py +48 -61
- scout/models/case/case_loading_models.py +2 -0
- scout/parse/omim.py +2 -2
- scout/server/app.py +23 -7
- scout/server/blueprints/alignviewers/controllers.py +46 -23
- scout/server/blueprints/alignviewers/templates/alignviewers/utils.html +1 -1
- scout/server/blueprints/cases/controllers.py +21 -47
- scout/server/blueprints/cases/templates/cases/case_report.html +4 -1
- scout/server/blueprints/cases/templates/cases/case_sma.html +19 -0
- scout/server/blueprints/cases/templates/cases/collapsible_actionbar.html +7 -7
- scout/server/blueprints/cases/templates/cases/individuals_table.html +1 -1
- scout/server/blueprints/clinvar/form.py +1 -1
- scout/server/blueprints/clinvar/templates/clinvar/clinvar_submissions.html +2 -2
- scout/server/blueprints/clinvar/templates/clinvar/multistep_add_variant.html +9 -3
- scout/server/blueprints/institutes/controllers.py +11 -38
- scout/server/blueprints/institutes/forms.py +18 -4
- scout/server/blueprints/institutes/templates/overview/cases.html +137 -46
- scout/server/blueprints/login/views.py +16 -12
- scout/server/blueprints/panels/controllers.py +4 -1
- scout/server/blueprints/panels/templates/panels/panel.html +1 -1
- scout/server/blueprints/panels/templates/panels/panels.html +5 -5
- scout/server/blueprints/public/templates/public/index.html +18 -10
- scout/server/blueprints/variant/templates/variant/components.html +0 -1
- scout/server/blueprints/variant/templates/variant/gene_disease_relations.html +1 -1
- scout/server/config.py +3 -0
- scout/server/extensions/__init__.py +2 -0
- scout/server/extensions/chanjo2_extension.py +46 -0
- scout/server/extensions/chanjo_extension.py +44 -1
- scout/server/extensions/matchmaker_extension.py +0 -1
- scout/server/links.py +11 -2
- scout/server/templates/report_base.html +1 -0
- scout/utils/convert.py +1 -1
- scout/utils/date.py +1 -1
- {scout_browser-4.88.dist-info → scout_browser-4.89.dist-info}/METADATA +1 -1
- {scout_browser-4.88.dist-info → scout_browser-4.89.dist-info}/RECORD +60 -59
- {scout_browser-4.88.dist-info → scout_browser-4.89.dist-info}/LICENSE +0 -0
- {scout_browser-4.88.dist-info → scout_browser-4.89.dist-info}/WHEEL +0 -0
- {scout_browser-4.88.dist-info → scout_browser-4.89.dist-info}/entry_points.txt +0 -0
- {scout_browser-4.88.dist-info → scout_browser-4.89.dist-info}/top_level.txt +0 -0
@@ -1,11 +1,11 @@
|
|
1
1
|
scout/__init__.py,sha256=Z4liXvmEcLkC67ElsWvYHfemPKdWgWI5O6MB6XlDM8M,232
|
2
|
-
scout/__version__.py,sha256=
|
2
|
+
scout/__version__.py,sha256=uHM9R1HpJEivvV6bRxxdV4CnINQ5HpyCHvuWWIFpq9w,21
|
3
3
|
scout/adapter/__init__.py,sha256=-iX_hx2NI1EMAqX0pMd5_90Nnd9uvIMxv9EbefYBzsc,86
|
4
4
|
scout/adapter/client.py,sha256=IuajRsEwTG41ZP14X09Q1Cj94zIgmIvUtlXfcAFn0EA,1513
|
5
5
|
scout/adapter/mongo/__init__.py,sha256=NdHYCUXWUAuX5cUS3-6HCws2hW9uoGep8i0SC-oJd3k,31
|
6
6
|
scout/adapter/mongo/acmg.py,sha256=v2Zuw-6APVmcnBnNXa18WJEu2vj5GUhZNiKMkruJsBI,4170
|
7
|
-
scout/adapter/mongo/base.py,sha256=
|
8
|
-
scout/adapter/mongo/case.py,sha256=
|
7
|
+
scout/adapter/mongo/base.py,sha256=yiaEmybAjLiCdAKouT0TET9aM2U-PtQm3En52MHR7Zs,4340
|
8
|
+
scout/adapter/mongo/case.py,sha256=HRm7KK7moV2V9lvnrFIqOWRt4FkX1a_Nhgdmlmn6zpU,64491
|
9
9
|
scout/adapter/mongo/case_events.py,sha256=slHR4XJF9vRuEbuInJKMMAImLF8m7tHWVfGP42fbXr0,26859
|
10
10
|
scout/adapter/mongo/case_group.py,sha256=tG8DuO0rNYepV4k0yCGPqssODErc0HMsAypg3mfhcV0,1575
|
11
11
|
scout/adapter/mongo/clinvar.py,sha256=tczC39O3DFDkYgjt2RDgkkG-x1Mvx_99Hw7dAbIQ5gk,19838
|
@@ -19,7 +19,7 @@ scout/adapter/mongo/index.py,sha256=TZPVv6xBWsEtZpBUWp5uhjuPjQMfVss4lZZju49g1Lw,
|
|
19
19
|
scout/adapter/mongo/institute.py,sha256=GQmMKb_VzsvWwadp6gXHlSSpcG5ovF1ozdTzvpTFLpA,7025
|
20
20
|
scout/adapter/mongo/managed_variant.py,sha256=YFdnIhNVIawVhmlOxHOpe6sJyso0FCGdlXOXyhSWol8,8373
|
21
21
|
scout/adapter/mongo/matchmaker.py,sha256=amTvFOlUbrt1RmecY_8hPY6bO3j79lc2UbmzlCQcRuk,6378
|
22
|
-
scout/adapter/mongo/omics_variant.py,sha256=
|
22
|
+
scout/adapter/mongo/omics_variant.py,sha256=VdkNG_l6vcr3UF25EixEfvIdMGkSGeNaMjLRhQHS_lc,7521
|
23
23
|
scout/adapter/mongo/panel.py,sha256=KRerlJzlm-NZRihDMJzOiD9ECYqqsEkXxkbcLADL0mI,20921
|
24
24
|
scout/adapter/mongo/phenomodel.py,sha256=cypSS8YRzu98Bf1kC0orfrLNn_ZQSYCK8e4mNR5PaPY,2572
|
25
25
|
scout/adapter/mongo/query.py,sha256=bifYuJ5oGYY17No2K8SvbnwCC__R585NaVRJ1oQIVsg,32964
|
@@ -31,7 +31,7 @@ scout/adapter/mongo/variant_events.py,sha256=LjUtxJLo3wGBjMI55wPs7sNPeDLq9POw6fg
|
|
31
31
|
scout/adapter/mongo/variant_loader.py,sha256=C05StRMFVChopcolPYXFIbh_S-FhYHu4NvBCpiBLOeE,28327
|
32
32
|
scout/build/__init__.py,sha256=GUWEaXTpwsJil_KtrXBQJpZIwCQFSgo8NlK49R9IkA8,521
|
33
33
|
scout/build/acmg.py,sha256=M21MrrP_dtEyOuu6t-jBDdaqYcHPMLcwJlt9fHG2ycE,1523
|
34
|
-
scout/build/case.py,sha256=
|
34
|
+
scout/build/case.py,sha256=7Hry6ja0KvVhNQ1ecXy3HuaR7dY2x9O8f8FpYt4P6jo,11404
|
35
35
|
scout/build/disease.py,sha256=Zew9AF_z1NbbKcO3uJZ2wgni501SkfnYRgnaCZ4m8FY,2020
|
36
36
|
scout/build/hpo.py,sha256=LJBCTq-x09D0CSKcUHB8a6ynuUrVh_7Ia0ooA1BxMys,1207
|
37
37
|
scout/build/individual.py,sha256=a2L1NJF11oGaOU9LilWN5gftSyIRfk7H231mF2Y67WU,5232
|
@@ -92,12 +92,12 @@ scout/commands/load/region.py,sha256=psICLlMf5WBdSCgXsJZUsM8fICsTJB3Q6U6dB5S6w_8
|
|
92
92
|
scout/commands/load/report.py,sha256=DrnyOJcLbOUUJHzI3jwlj955zYohvjuTeeoeUS_ZU8Q,3564
|
93
93
|
scout/commands/load/research.py,sha256=6GBKJY3POQyGxfPwcfj06tcCX48CBTZqq8MSdjevBjM,4426
|
94
94
|
scout/commands/load/user.py,sha256=eDHt_byU3DVhI9D-3GwEW_VpQbIF6bPEORAieCTcdUc,1412
|
95
|
-
scout/commands/load/variants.py,sha256=
|
95
|
+
scout/commands/load/variants.py,sha256=MqghhgjpP9QiWlBIb-LogtPvBSl3kO2v3OWNlPLuB14,9355
|
96
96
|
scout/commands/setup/__init__.py,sha256=uiuizwirbfLqp93K4__b982obk1stkzwpvXHi51OAbE,31
|
97
97
|
scout/commands/setup/setup_scout.py,sha256=Pj4Xmm-NsTykPpUkKu_cxDS42rNZOWlEdVFcnaCxDO4,9254
|
98
98
|
scout/commands/update/__init__.py,sha256=yKNjRTVFsSTko8T7znfMqSI_HsGPN2-z1c0twkwO5uE,25
|
99
99
|
scout/commands/update/base.py,sha256=XxxBGzn9JdFfk39jsZbU5eAZhE41MLq73WwLqa_u4Rc,1179
|
100
|
-
scout/commands/update/case.py,sha256=
|
100
|
+
scout/commands/update/case.py,sha256=hDcgYc27-LOeXiilW5DLhAel2-uAaYvTdUUvGlgNInE,7301
|
101
101
|
scout/commands/update/compounds.py,sha256=vwCtb6045tGovKWHqY_uL8w1l9rZ_Hxlt0gUU0cKXUk,753
|
102
102
|
scout/commands/update/disease.py,sha256=AajPLoEtd9YeU3jf7S7ZQRs3_o1H3GSxHsST_sVaIZQ,3846
|
103
103
|
scout/commands/update/genes.py,sha256=GhYIn2zWrAZMhdJjzzrpo8AquFqr7XOvosOk8lg4Zwk,6989
|
@@ -126,15 +126,15 @@ scout/commands/view/transcripts.py,sha256=59WyNNp7zHPJIz9QgzrkoeKaSXTtuLli0VuL8I
|
|
126
126
|
scout/commands/view/users.py,sha256=MKlmhDYRM7Yf-Trmi1ijEuqsDIUn326bdFADyDs7XYg,832
|
127
127
|
scout/constants/__init__.py,sha256=phyLVKTDNqMKzWRaNvKqgdEZCOO1gc-2LbkCDwN6nhI,6901
|
128
128
|
scout/constants/acmg.py,sha256=fjq_UFLkJPh7ZfuW-l4KH_lWKAGhNiKhlaPu1G_WXo4,13091
|
129
|
-
scout/constants/case_tags.py,sha256=
|
129
|
+
scout/constants/case_tags.py,sha256=wWtiSYVsRQiXml5m8-J1JsMUGKsv1smIszNleyc4Lgw,11119
|
130
130
|
scout/constants/clinvar.py,sha256=nr7KhwMIO_7taNQokRJlpgZfenMlKsdPIMpdOx3TwKY,5594
|
131
131
|
scout/constants/clnsig.py,sha256=2u_avIzWO_IPJGcTOoSB7_xqgu5JBl_zZZfT8UVpY90,1359
|
132
|
-
scout/constants/disease_parsing.py,sha256=
|
132
|
+
scout/constants/disease_parsing.py,sha256=M9_OgsN88oXwKH_XpxdDma0zuWPRoHFQjL19tzojBPo,686
|
133
133
|
scout/constants/file_types.py,sha256=3BU2cw40cHMT5IzEGEF_SsIhgYUbnIlUCRmwmB01fzI,3046
|
134
134
|
scout/constants/filters.py,sha256=1bcj-z7__yv5eQpjB60wqSHZ3U5U0CVyNbcYT-Wn-vc,957
|
135
135
|
scout/constants/gene_tags.py,sha256=tdzDh6ukJRtHiC8X5YkldijZCS0KrEeXj95sLNlqxuc,3852
|
136
|
-
scout/constants/igv_tracks.py,sha256=
|
137
|
-
scout/constants/indexes.py,sha256
|
136
|
+
scout/constants/igv_tracks.py,sha256=NbBBnM3s1S8cJM_S36qi7SU2ACW_lJVS6EP2W0kCTIQ,4697
|
137
|
+
scout/constants/indexes.py,sha256=-rb5VP68Arl2t-bFDYWiQswAF3YxjrAJVuMtQWrT__8,5497
|
138
138
|
scout/constants/phenotype.py,sha256=MrbXirisR_7GPnxV3NOj3-BoM9CvtGgFZj7PfJu85RM,2331
|
139
139
|
scout/constants/query_terms.py,sha256=RrHSBde-UNfdD2D5r1ViHcLfDD-q_sEkLZsPKOE91x4,1556
|
140
140
|
scout/constants/so_terms.py,sha256=aJcQv3wgpZylVhqSJH854WS8xSARDxWGnW6I5mG1egE,4321
|
@@ -154,7 +154,7 @@ scout/demo/643594.clinical.str.vcf.gz,sha256=ElvicUseKkN-DiZOQrFXstxy2jo9lhVMn58
|
|
154
154
|
scout/demo/643594.clinical.str.vcf.gz.tbi,sha256=pyWRI8-DlfGw08S66nYqLOthbaRaNMpAhUACm48iM5A,1695
|
155
155
|
scout/demo/643594.clinical.vcf.gz,sha256=KpGBJPNfqOEE0uOkdldAeFRxdmPMPIlksiypXRhtOoE,409450
|
156
156
|
scout/demo/643594.clinical.vcf.gz.tbi,sha256=Pr1XyC4gonboAlTasdT-a7w7T8bNQXjV_G5hVdC9dy8,7732
|
157
|
-
scout/demo/643594.config.yaml,sha256
|
157
|
+
scout/demo/643594.config.yaml,sha256=XHZPO9iIRFC2wOde1G82QdYXyynsBmb-nAn3mOZReG4,5519
|
158
158
|
scout/demo/643594.ped,sha256=P-k5eZY78ZRtajMDQ_rr7Xv5oFhBO-vDc7whg36Jnw4,154
|
159
159
|
scout/demo/643594.ped_check.csv,sha256=36HoP13haqQerTEHuJF4R2r6Vh2AQilS1NTr7X6aoZs,444
|
160
160
|
scout/demo/643594.peddy.ped,sha256=msfhM3u_5hK_zjHhMas5Ns_KREllRyHN3kdTIVl5J-c,421
|
@@ -202,7 +202,7 @@ scout/demo/fusion_data.vcf,sha256=_-Zd4g4qvfG3SSWbGCtv_lwecYOUXy4cmBDDBeUUjAM,39
|
|
202
202
|
scout/demo/madeline.xml,sha256=5gVlcdFYYs6LUq1jdgcxUMirICf7dX3eEhVHmDmapQU,5190
|
203
203
|
scout/demo/manta_vep_94_annotated_sv_cancer_file.vcf.gz,sha256=lgg5x6vUj-eqM8BmblCY1RpuslqC8J86J8xW1psOock,184935
|
204
204
|
scout/demo/panel_1.csv,sha256=QE11T3k3TkMRxZ16Y5tqQ68dMTf5SA-rlIwaqFB8pS8,6075
|
205
|
-
scout/demo/panel_1.txt,sha256=
|
205
|
+
scout/demo/panel_1.txt,sha256=kIN2CGFaSGhJFfitLDF7Z7_NCL49WPxYjwmFyuMQyT4,6187
|
206
206
|
scout/demo/panelapp_test_panel.json,sha256=Y6Dz1Dq9CGf-19Jj1_rssycDcUESfh-yUD0U7A5Ucr4,2554
|
207
207
|
scout/demo/reduced_mt.bam,sha256=DlC0lBAQrqbNrRSJ27MrOVmF5_bjRINmHwMn45a0-_c,492247
|
208
208
|
scout/demo/reduced_mt.bam.bai,sha256=S8k17QiK9jkLHM3usZP-Rsc5xGe5kvHfbMbB3-KKIRM,808
|
@@ -333,17 +333,17 @@ scout/demo/mitodel_test_files/slowlycivilbuck_lanes_1_sorted_md_mitodel.txt,sha2
|
|
333
333
|
scout/demo/resources/__init__.py,sha256=-1U794_QAYb8-gr2rotFKzIceQzU-K7ypeSlgiC1ST4,2712
|
334
334
|
scout/demo/resources/chanjo4_structure.sql,sha256=qn0bl87B9tRW-_QdEkbkVvbX54qCgWSqpsTsRdWCQmE,3536
|
335
335
|
scout/demo/resources/en_product9_ages_reduced.xml,sha256=CzIY80hZ3Pcd1YAixtvg4tMVtLrySvcrX8z1Zkeg_8E,7215
|
336
|
-
scout/demo/resources/ensembl_exons_37_reduced.txt,sha256=
|
337
|
-
scout/demo/resources/ensembl_exons_38_reduced.txt,sha256=
|
338
|
-
scout/demo/resources/ensembl_genes_37_reduced.txt,sha256=
|
339
|
-
scout/demo/resources/ensembl_genes_38_reduced.txt,sha256=
|
340
|
-
scout/demo/resources/ensembl_transcripts_37_reduced.txt,sha256=
|
341
|
-
scout/demo/resources/ensembl_transcripts_38_reduced.txt,sha256=
|
336
|
+
scout/demo/resources/ensembl_exons_37_reduced.txt,sha256=PDEOpAiMbnK7WrnQVNUsKSOxEjnJH44Xrkj4nic3Fpc,1629572
|
337
|
+
scout/demo/resources/ensembl_exons_38_reduced.txt,sha256=ARGBiZQjYprto52jON6XW84brmLmiyXOHSr3iHjgLWY,1639690
|
338
|
+
scout/demo/resources/ensembl_genes_37_reduced.txt,sha256=hwhe99WsKbKecOjjh3AuQm0zrsR_jw2W2epgGyYBWNw,12876
|
339
|
+
scout/demo/resources/ensembl_genes_38_reduced.txt,sha256=msJZHYDBcZ5T9T0LYNAOF4fmNduskcPmZpBjCWZ14cs,12876
|
340
|
+
scout/demo/resources/ensembl_transcripts_37_reduced.txt,sha256=ibmZT5HRVbHc2cPB1o_n_yAlA8W64321tgkOhqnstnc,147086
|
341
|
+
scout/demo/resources/ensembl_transcripts_38_reduced.txt,sha256=NI1vd1kOvnkTstHj_lm6L13iTvacfvp9ENOiTT_nDVA,250500
|
342
342
|
scout/demo/resources/forweb_cleaned_exac_r03_march16_z_data_pLI_reduced.txt,sha256=cH3oMC2f9kgvf-sLkZZoMpcihfC2fJtWn7ZR4-hA_5c,65064
|
343
343
|
scout/demo/resources/genemap2_reduced.txt,sha256=dFKGGimEpkjh7voy9VMT7fWwtOhSB4PSp_tipY3Vdeg,55579
|
344
344
|
scout/demo/resources/genes_to_phenotype_reduced.txt,sha256=3DnhL9vvdV_H1XU8MFrfy9ILr1v009P-j75vhXOO3VQ,449214
|
345
345
|
scout/demo/resources/gnomad.v4.0.constraint_metrics_reduced.tsv,sha256=baHCDkrUiN9JTMYqo0PA7aQeXljQ51GlswnZJBAwWiI,1509494
|
346
|
-
scout/demo/resources/hgnc_reduced_set.txt,sha256=
|
346
|
+
scout/demo/resources/hgnc_reduced_set.txt,sha256=zAgNvQ4QWnxVzj6PYJ4MkkGFpZktl39nNZ5Dz00pXhM,124797
|
347
347
|
scout/demo/resources/hpo_terms.csv,sha256=K7uwtYpNqKXvGsMhEaOTdpKhwCMqTDyc3liIoUkuvdg,80883
|
348
348
|
scout/demo/resources/mim2gene_reduced.txt,sha256=SwCrIxJbh2AY5LjB1OxwNT-UOgfQ1KcvVTfLsBBkuts,10626
|
349
349
|
scout/demo/resources/orphadata_en_product4_reduced.xml,sha256=nFh7-tVZ9aQphkp-C1HdIRTKmshPXF7yIweOjQQMQPU,20034
|
@@ -375,8 +375,8 @@ scout/load/report.py,sha256=TJvblks6Dp5-UDflWRTa8b3fe-A4bT4QnWT2yZLhfLA,820
|
|
375
375
|
scout/load/setup.py,sha256=Xu-m59rJW5bF6Agf6XdiEo_Ik4ZAFfN0tF2FjLIMYAY,8218
|
376
376
|
scout/load/transcript.py,sha256=mk0Da7GWwqLVRp2xRD9mlzqaomH9R-TL2aKCJx4fEA8,4632
|
377
377
|
scout/log/__init__.py,sha256=ezc9URKnFoELUif9ZNqG6vNzXPOccGuDyzqoBngSIZo,63
|
378
|
-
scout/log/handlers.py,sha256=
|
379
|
-
scout/log/log.py,sha256=
|
378
|
+
scout/log/handlers.py,sha256=HBwcJkiBZxkiJYwacBMIuxuKaodo6nfjQeQokiVEa8s,1378
|
379
|
+
scout/log/log.py,sha256=EPtd6Z1HMSvmuDHdElLUcLhPsz36LNQSX09Lg3m1jCY,1549
|
380
380
|
scout/models/__init__.py,sha256=xfMJsbQbGB1ZMa5zhS0S_R0udxZ4PX8h24NtnJ2gIt0,117
|
381
381
|
scout/models/acmg_evaluation.py,sha256=Rn8GvbcUjMS1ZjDaPxuxn2cwWuESxeHOadZn4SREyeo,676
|
382
382
|
scout/models/clinvar.py,sha256=fTmQYV3yRxQn1JBOwKnovYmkl19H14HKRE2zY9JA93U,3102
|
@@ -392,7 +392,7 @@ scout/models/phenotype_term.py,sha256=jY7dbfPzgE14M1gWqifm5YKkwMlrtfFa_WBHMT1_og
|
|
392
392
|
scout/models/user.py,sha256=oercrjpf9fLomqAcN0Fv1BL_XPjOrS_vchURo0RP7es,1134
|
393
393
|
scout/models/case/__init__.py,sha256=Sqczn7Wm9KYZtPGAHCvwX_6j9vlaK-0myJtSDlS-448,121
|
394
394
|
scout/models/case/case.py,sha256=Wu2D6IZKkFXLeF7emcBr7n1HQ7Mj9rO-cN-8T9rhkSU,5282
|
395
|
-
scout/models/case/case_loading_models.py,sha256=
|
395
|
+
scout/models/case/case_loading_models.py,sha256=n__1UVOKnaGnqytjAZhIuhfRyJcoiZTxDIeMtMPQkNw,21514
|
396
396
|
scout/models/variant/__init__.py,sha256=H-IZ2hSTSVS28S8FZzA8j2Cyu1PHQFXyMWJFtCucPAk,40
|
397
397
|
scout/models/variant/gene.py,sha256=98CG_JcAklGGFIrUulf1_olQalV65kXQO-gOf7VQZ0A,1095
|
398
398
|
scout/models/variant/transcript.py,sha256=rfflEbTs7Bn4HDENqrxtGopQ_0HKnrVLLyBcrj4NpwM,1720
|
@@ -408,7 +408,7 @@ scout/parse/hpo_mappings.py,sha256=UJY38iLmpJFnZ9FuRaNIGhNQnTx7_WASxr9mlEnhvHE,2
|
|
408
408
|
scout/parse/hpo_terms.py,sha256=ZJCKFD0rV3jiCuoI8Gm1WNTiaOSRRoKOhZ1bYnqwY6I,5732
|
409
409
|
scout/parse/matchmaker.py,sha256=5e9NCFQ2rKXNCJTW-ThXoEylEPl3H41cCfQzPATQ2QM,9524
|
410
410
|
scout/parse/mitodel.py,sha256=3uvEXI9v9wIw97NUL7gqLLxHay0mpQpDgKaIxUbIyrE,803
|
411
|
-
scout/parse/omim.py,sha256=
|
411
|
+
scout/parse/omim.py,sha256=nrCaFZgjUKZo9Jfku2-jcNjdsIYHsvjdWcydz4nCpZA,12465
|
412
412
|
scout/parse/orpha.py,sha256=5u9xqGpAn8vgoJ0uVqbYiqQBiNfBwXOiTzX16kAnmFU,4392
|
413
413
|
scout/parse/panel.py,sha256=4HYjokWh2sF-effLQxPf4ZzRHsf9grqF1Z9f-HAaRmk,13153
|
414
414
|
scout/parse/peddy.py,sha256=uM49GaZMtr8waCsZDvCHDS5JDQ43JUlhdWh9C7f7ZvU,5418
|
@@ -436,23 +436,23 @@ scout/resources/__init__.py,sha256=i9UVG651subgmOZ-Gm-JKPsXBqr5-50QUDfSpbwmwIw,4
|
|
436
436
|
scout/resources/cytoBand_hg19.txt.gz,sha256=pheUD5b9NlVuvwwnbKwDc2FG80Yg70gvPxVXP-Sqd3k,6147
|
437
437
|
scout/resources/cytoBand_hg38.txt.gz,sha256=sqSVmvPlktQ-0hTiTapJM-5UgyV6xDoYZuTF0kPuETs,6105
|
438
438
|
scout/server/__init__.py,sha256=iwhKnzeBJLKxpRVjvzwiRE63_zNpIBfaKLITauVph-0,24
|
439
|
-
scout/server/app.py,sha256=
|
439
|
+
scout/server/app.py,sha256=70YdN9eWL1ySEYkuAHKOk_WA4Fm5dcIwtIZEcEf-xA0,10836
|
440
440
|
scout/server/auto.py,sha256=8B6GwfOaUChkTLuLgYQDFMWlxGuHkEegF1argH2G2Ik,401
|
441
|
-
scout/server/config.py,sha256=
|
442
|
-
scout/server/links.py,sha256=
|
441
|
+
scout/server/config.py,sha256=BFx6ix8D3KM90FqmaHLxv_feudO2kN2CkX1UWBGTjXE,5923
|
442
|
+
scout/server/links.py,sha256=WjExw0fWrMDtZidSFklNWkRuiQMNzfaYP_x3uA19gAg,27379
|
443
443
|
scout/server/utils.py,sha256=lhFJI6UkNDD1OPnC53SYG2vjfMNmjp4BBf1tcO8R-ZM,12634
|
444
444
|
scout/server/blueprints/__init__.py,sha256=iwhKnzeBJLKxpRVjvzwiRE63_zNpIBfaKLITauVph-0,24
|
445
445
|
scout/server/blueprints/alignviewers/__init__.py,sha256=XMVed2ekVUAvroqENDHSr2pwM8otqau8ZA-rbH1T2U8,59
|
446
|
-
scout/server/blueprints/alignviewers/controllers.py,sha256=
|
446
|
+
scout/server/blueprints/alignviewers/controllers.py,sha256=PumR2UMmJSAXoKZkyaPIVK83hcPSjXHXMrPfL-GKJ1s,14053
|
447
447
|
scout/server/blueprints/alignviewers/partial.py,sha256=9hpI00yhvZZCcPVUHlVDp488r1j7vYU5YDXYA6OkWQM,2005
|
448
448
|
scout/server/blueprints/alignviewers/views.py,sha256=yQmWqzjdYmqs4e2nzDPLNjgpsNzKhBv1LJGaJi8bnyc,4963
|
449
449
|
scout/server/blueprints/alignviewers/templates/alignviewers/igv_sashimi_viewer.html,sha256=37ArJCraTajqWlCvyQYVfSvWCg94pRDIMvf2Y7Oe_j4,5545
|
450
450
|
scout/server/blueprints/alignviewers/templates/alignviewers/igv_viewer.html,sha256=u7_OUfcGt-S6BFhwleE4mNprshO870CnzhgLpe4tocg,8564
|
451
|
-
scout/server/blueprints/alignviewers/templates/alignviewers/utils.html,sha256=
|
451
|
+
scout/server/blueprints/alignviewers/templates/alignviewers/utils.html,sha256=hnyQifeqxIQ2vNAPs9OgjAuQfcVrPe46C23RUJJFHXA,336
|
452
452
|
scout/server/blueprints/api/__init__.py,sha256=HR6HjS7ot1K_8Lt5eQdNT154z_FCdHGSigy8r2LpNCI,26
|
453
453
|
scout/server/blueprints/api/views.py,sha256=pbl78wfhrm1T8JmiJDYF3BbTbfFrlF-hQRbuv2GWI0s,3729
|
454
454
|
scout/server/blueprints/cases/__init__.py,sha256=_c17kPFITFYcIVphF4V9bf0PZBer8bU3rtVWQnljKDU,52
|
455
|
-
scout/server/blueprints/cases/controllers.py,sha256=
|
455
|
+
scout/server/blueprints/cases/controllers.py,sha256=Fz5nq3h0sO8Xvzm59GsjipKD7vOGjN_GrW8vXu7Pn6E,53515
|
456
456
|
scout/server/blueprints/cases/views.py,sha256=ZfuDfkcOiw7PHUr68mowJyYxUb6_gQObR488mhP6l78,42841
|
457
457
|
scout/server/blueprints/cases/static/case_images.js,sha256=pb_gG7DNQc-1lADqSII8YvjBwmHyeQWYVtuu2jyrTlU,14997
|
458
458
|
scout/server/blueprints/cases/static/case_styles.css,sha256=2Pgc8pFf9DR5HM1sTdAjaRWhjL-bK5bsQnLpH54HZak,541
|
@@ -460,27 +460,27 @@ scout/server/blueprints/cases/static/edit_pedigree.js,sha256=ntC5fie7SsOYJau8qkk
|
|
460
460
|
scout/server/blueprints/cases/static/madeline.js,sha256=KHxKMBVlYVJODNu5QkY9hhsGkDJNoaCoCZZ0DRu0YN0,1175
|
461
461
|
scout/server/blueprints/cases/templates/cases/case.html,sha256=9Fcn-OFA1yIHchD0PjDs7-Y8I7Qqr8o6cavN0eOi5rI,37183
|
462
462
|
scout/server/blueprints/cases/templates/cases/case_bionano.html,sha256=PLoRv7hDJcHwxhi-0hC9fQSZc7V_aUYHBhhQqcn_2G8,5946
|
463
|
-
scout/server/blueprints/cases/templates/cases/case_report.html,sha256=
|
464
|
-
scout/server/blueprints/cases/templates/cases/case_sma.html,sha256=
|
463
|
+
scout/server/blueprints/cases/templates/cases/case_report.html,sha256=CzOIec3hbCXCwIQpB0L0vGQPtYvQjJbJXcir61jUM2Q,63091
|
464
|
+
scout/server/blueprints/cases/templates/cases/case_sma.html,sha256=5kpvNPhOO15wTP_WjYX22wQ_B5-pw4jIQweNXYLbsAU,6281
|
465
465
|
scout/server/blueprints/cases/templates/cases/case_tabular_view.html,sha256=ko-LDUKmIoTazMZ2nFWvPEZsgObU07RwqIkDYFjokoY,4317
|
466
466
|
scout/server/blueprints/cases/templates/cases/chanjo2_form.html,sha256=5Wmk7DM8LI3MynqzxeTzAr_EoEBwVVo31djcI5ZlTdo,2164
|
467
|
-
scout/server/blueprints/cases/templates/cases/collapsible_actionbar.html,sha256=
|
467
|
+
scout/server/blueprints/cases/templates/cases/collapsible_actionbar.html,sha256=QyEncsGLRJu0kgkDLvXGSzUwODJQrbE0o3q3ejSBUXY,29260
|
468
468
|
scout/server/blueprints/cases/templates/cases/diseases.html,sha256=ETTQI0Nrl_v86NoX9mFZcvWD-qM1IJoqPmHPWn__Grw,1677
|
469
469
|
scout/server/blueprints/cases/templates/cases/gene_panel.html,sha256=lkC_Piqaq-paYr4GUCwQaR8EgGOUXDMoW5sPLDW7yzg,11628
|
470
470
|
scout/server/blueprints/cases/templates/cases/index.html,sha256=oUmjFyUvwP4yo21CxcWy-6eepMFI65hpznMEpSEqKfM,1207
|
471
|
-
scout/server/blueprints/cases/templates/cases/individuals_table.html,sha256=
|
471
|
+
scout/server/blueprints/cases/templates/cases/individuals_table.html,sha256=wjcrPMYXZGRWxM0GzHwbLmsOPWtmke9p2T22ngCBMyU,11460
|
472
472
|
scout/server/blueprints/cases/templates/cases/institutes_sidebar.html,sha256=u0oPGHJ0ipZ1LkjHkbwlWfkUWc1h6XH1nh3tkbX17z0,4546
|
473
473
|
scout/server/blueprints/cases/templates/cases/matchmaker.html,sha256=1vwGBhM4HgvRMlO1foKBAwV-Wfvfs1MRvzteOETCZeM,13142
|
474
474
|
scout/server/blueprints/cases/templates/cases/phenotype.html,sha256=7vz5XPUExD6vc-wdijLKnPzaOFm9mQxOZ_ITAL3y7U8,16420
|
475
475
|
scout/server/blueprints/cases/templates/cases/utils.html,sha256=gHcxf3DOGcJJZMfjKY4NgvU_tjta5OnyWrKZy9pfGyY,35981
|
476
476
|
scout/server/blueprints/clinvar/__init__.py,sha256=BV3aH2AbiA2WWrUEMbGd0H9MefFd2eTsRE9ShywbzpI,30
|
477
477
|
scout/server/blueprints/clinvar/controllers.py,sha256=EZv6cwmg2pYwLFq5SPskrARrjjf3Az7GN23lcZn52vg,24254
|
478
|
-
scout/server/blueprints/clinvar/form.py,sha256=
|
478
|
+
scout/server/blueprints/clinvar/form.py,sha256=2h42YJzaOtsdEglxqt7F1i2ncjSU_IHNt-m4QOJytK4,5148
|
479
479
|
scout/server/blueprints/clinvar/views.py,sha256=hPyTJA7Qy6QOL-ENSG1N0atnQXuYCb-iiO8fuNDjJns,6036
|
480
480
|
scout/server/blueprints/clinvar/static/form_style.css,sha256=Tro2w0Su9st2ZRpt8PjF7qXYet-0n6Eyol4oh94JafU,4073
|
481
481
|
scout/server/blueprints/clinvar/templates/clinvar/clinvar_howto.html,sha256=phFsRl6Hv94sy4GueBN0MXYbQsW6qmR1NoH-3Iwt2zs,4852
|
482
|
-
scout/server/blueprints/clinvar/templates/clinvar/clinvar_submissions.html,sha256=
|
483
|
-
scout/server/blueprints/clinvar/templates/clinvar/multistep_add_variant.html,sha256=
|
482
|
+
scout/server/blueprints/clinvar/templates/clinvar/clinvar_submissions.html,sha256=fNIglI_Bs04wp0YnD5E8hXQTWvukyaH2PQnOIzbXV6w,18229
|
483
|
+
scout/server/blueprints/clinvar/templates/clinvar/multistep_add_variant.html,sha256=dBrIRJLcbW0bI2n2QoeZLgr91S8kJmzHYFVnDgUkP24,31987
|
484
484
|
scout/server/blueprints/dashboard/__init__.py,sha256=9YTjGeFexyEbl4P-gs7j8VEjyhnVwHZFfz57eTtod1M,69
|
485
485
|
scout/server/blueprints/dashboard/controllers.py,sha256=c0oOVzyHmQEypQPGRr8Kh_QdKidMjwqPd9UF1_kFLIk,10698
|
486
486
|
scout/server/blueprints/dashboard/forms.py,sha256=CgwCHGZcxi08-04hwlw-rXZau_C9X2Qoq1ayTd533qY,826
|
@@ -500,14 +500,14 @@ scout/server/blueprints/genes/templates/genes/gene.html,sha256=X1WR-sHYGnWyhQfgN
|
|
500
500
|
scout/server/blueprints/genes/templates/genes/genes.html,sha256=x6jXKijvuEX9GvIedHW4O_BerYXiWEmAdYT0HTiGnhI,1130
|
501
501
|
scout/server/blueprints/genes/templates/genes/layout.html,sha256=cZMLe2cInq24z0sZpPxDm_kEiAe5VQbOR-8XWn6wlvI,1601
|
502
502
|
scout/server/blueprints/institutes/__init__.py,sha256=kGSyYrBC1QaEQBDdoMkMLfaowV7roaV5DowICi_0RSQ,65
|
503
|
-
scout/server/blueprints/institutes/controllers.py,sha256=
|
504
|
-
scout/server/blueprints/institutes/forms.py,sha256=
|
503
|
+
scout/server/blueprints/institutes/controllers.py,sha256=eaqx8OKOqFTS-2gwzhS5gY_PERghxTazT6Stj-FmN1I,31652
|
504
|
+
scout/server/blueprints/institutes/forms.py,sha256=BkiCyhrj9uSoQA85ehx7neAehg4odvT1ie0KxJ6vf0Y,6732
|
505
505
|
scout/server/blueprints/institutes/views.py,sha256=Bx_hQm4oL12OaljiTogG3CnrkGYczsUzRfDckwBJhmU,8621
|
506
506
|
scout/server/blueprints/institutes/static/form_scripts.js,sha256=8Sn7omeXeeUbiXJPfT0Qb4CaBJ_KtZZWw7N2he7EDx0,747
|
507
507
|
scout/server/blueprints/institutes/static/select2_darktheme.css,sha256=Nq_va597W_e5y-52B4ClwSJzACq0WFbPU8SIp3DtKIo,1818
|
508
508
|
scout/server/blueprints/institutes/static/timeline_styles.css,sha256=Vq48ffIidpQmDQhAzfW47O9mGQZEWdlbMtOE8AK-ZEU,2122
|
509
509
|
scout/server/blueprints/institutes/static/variants_list_scripts.js,sha256=gO_ZuJC2jj7Y9x6CEVEVhN1oIE4bIWrTY0_zVcsbRbY,236
|
510
|
-
scout/server/blueprints/institutes/templates/overview/cases.html,sha256=
|
510
|
+
scout/server/blueprints/institutes/templates/overview/cases.html,sha256=ej7HZMT3pwzjymO7B3QoK6QUqsPd6qhRv_fFzdTBMgw,19635
|
511
511
|
scout/server/blueprints/institutes/templates/overview/causatives.html,sha256=KHCPIshkenOjIVWkG9usfLqkORChonGdOiIRw0h1oj0,1593
|
512
512
|
scout/server/blueprints/institutes/templates/overview/filters.html,sha256=Dzu5YicmdjW_zGqbCUrb8TMbSUuRaG47itTMwwX7Bm8,3102
|
513
513
|
scout/server/blueprints/institutes/templates/overview/gene_variants.html,sha256=LpI-uBXP5eoOMrLyrIeCwVKTrzF-7sD8FESZptvFmOw,8571
|
@@ -520,7 +520,7 @@ scout/server/blueprints/institutes/templates/overview/verified.html,sha256=NvjGw
|
|
520
520
|
scout/server/blueprints/login/__init__.py,sha256=uDzQjNNrMloZ4-i-1cEW7d59FZ--Xy89b-Xn5SvyC1U,52
|
521
521
|
scout/server/blueprints/login/controllers.py,sha256=bg0me00OvwYJiTm4dZnbl8eyRRRDquBMs5U7_YV4xWI,1883
|
522
522
|
scout/server/blueprints/login/models.py,sha256=w0ELh33rX1zwEnzZE-nhaoB6Z1JfgWxzWJ43JFJJo4s,688
|
523
|
-
scout/server/blueprints/login/views.py,sha256=
|
523
|
+
scout/server/blueprints/login/views.py,sha256=0fAH91TAeO9h_ufLiUXjtzh5G21ODqi_OOPErmAJSQ8,4437
|
524
524
|
scout/server/blueprints/login/static/aspirant.svg,sha256=qMXSX7WzHCDrqcnn6_U_mpQolZc3LVChPsRISGVRO00,270226
|
525
525
|
scout/server/blueprints/login/static/commander.svg,sha256=qXfFTyAE0myoOxJ8d1xb138APPllUOYxXE1Dp66Bz0o,195476
|
526
526
|
scout/server/blueprints/login/static/commissioner.svg,sha256=kAMMtiUauuKKKwYYVhjI8BOjiFoVLZWtj3zcmdwbVzg,415421
|
@@ -540,14 +540,14 @@ scout/server/blueprints/omics_variants/controllers.py,sha256=AnM70stvLniJIU3pFUX
|
|
540
540
|
scout/server/blueprints/omics_variants/views.py,sha256=4_wOqAhu_Zl6heqm7ilE8y8xOfy3PU532rkp_H0KZFg,3724
|
541
541
|
scout/server/blueprints/omics_variants/templates/omics_variants/outliers.html,sha256=E9FhdrYQuLYbB9sk9ct89cWVmbetZFJDCQTqVxWdVrM,13274
|
542
542
|
scout/server/blueprints/panels/__init__.py,sha256=usxBF0O7zNX1d9jt-8DRoFZwcfHHS96Gv87LDr1AgG4,53
|
543
|
-
scout/server/blueprints/panels/controllers.py,sha256=
|
543
|
+
scout/server/blueprints/panels/controllers.py,sha256=PKNN0JpxkvmLD1qHXGHWAjSjW9t_WfGWIrYACWmwMVo,12744
|
544
544
|
scout/server/blueprints/panels/forms.py,sha256=DYlhYpnpv7ehf9JlY3HRFwy-TZ5QDHB0RIRaNTAW1jQ,696
|
545
545
|
scout/server/blueprints/panels/views.py,sha256=pkrAqoIfOr2kh3Kb5f1HdHQnLSMwLGFiLgja_eInTdM,15688
|
546
546
|
scout/server/blueprints/panels/templates/panels/gene-edit.html,sha256=ZuXxdvjioxHlC0mz54t4q2KBFvP2qXb5VpNIcMVayVM,3649
|
547
|
-
scout/server/blueprints/panels/templates/panels/panel.html,sha256=
|
547
|
+
scout/server/blueprints/panels/templates/panels/panel.html,sha256=qV83Ez6pD2CPJkSOtPTXqS8Czk9uJjj01MR_VhfgcMc,15560
|
548
548
|
scout/server/blueprints/panels/templates/panels/panel_pdf_case_hits.html,sha256=uzfZJiMNQiTa_6u4uMuIbK3VXIs-8Rw-MjKujFttZG8,3438
|
549
549
|
scout/server/blueprints/panels/templates/panels/panel_pdf_simple.html,sha256=6fcuiYcm_Gjh0klgQ9AfbpYUJAQrXm0YPAjFwrtmLHs,2677
|
550
|
-
scout/server/blueprints/panels/templates/panels/panels.html,sha256=
|
550
|
+
scout/server/blueprints/panels/templates/panels/panels.html,sha256=zjVzfgsapjlZBZ8Kz2zRz0oShg1msXTkkoENy9jF4Tc,14038
|
551
551
|
scout/server/blueprints/phenomodels/__init__.py,sha256=Kb1fqfCn-QsH5mz6hiuQ2DiC7icTClD4HLey6QN4GD4,34
|
552
552
|
scout/server/blueprints/phenomodels/controllers.py,sha256=g5-BxlaHN7JBuQHEcOtQMUDEO9U9iy9HICaIaIEn3vk,11019
|
553
553
|
scout/server/blueprints/phenomodels/forms.py,sha256=Z7dMIJml5xZ1cQV1jh_-IGVxhxk4lVhcUTvFa6ArbJo,740
|
@@ -594,7 +594,7 @@ scout/server/blueprints/public/static/ideograms/chromosome-9.png,sha256=FJFQT6T3
|
|
594
594
|
scout/server/blueprints/public/static/ideograms/chromosome-M.png,sha256=xY53NbeYm1vWNf4crp3NRePb7tJGQriXe80Re8PicUs,12698
|
595
595
|
scout/server/blueprints/public/static/ideograms/chromosome-X.png,sha256=Dj7npcW_hhB7_W5Un_Eg3VLUyyUGe0-ZU9HL3nwfbJ0,1646
|
596
596
|
scout/server/blueprints/public/static/ideograms/chromosome-Y.png,sha256=KlOsBLZYFVHRvXvTioT-XE57zSWoYeIwIEXo_rzLBR0,1524
|
597
|
-
scout/server/blueprints/public/templates/public/index.html,sha256
|
597
|
+
scout/server/blueprints/public/templates/public/index.html,sha256=-c6-r2G6-cdE9PLV126V8zTwYmApI88UIQKWuVP6HP4,4268
|
598
598
|
scout/server/blueprints/variant/__init__.py,sha256=SlD8-Aoj9Jq9aVTJjtFfsu-0sUVfkzpiEXcH8z9q6dI,54
|
599
599
|
scout/server/blueprints/variant/controllers.py,sha256=2XEBrvq4kXNA2Mj1G6GMfWHphEfgafDewoqFW32Q0PQ,25160
|
600
600
|
scout/server/blueprints/variant/utils.py,sha256=MCz_CPH10eOS-WYvEmJaNXxsJMzav822zTvfiQnBx8U,23045
|
@@ -603,8 +603,8 @@ scout/server/blueprints/variant/views.py,sha256=jz5kFRCLhEVRQKFJtKmG0Nq4TX6ofEey
|
|
603
603
|
scout/server/blueprints/variant/templates/variant/acmg.html,sha256=ubitRnQoADLLOptwMgsPLb1AXhwZgV1YlN504VaC2lY,7754
|
604
604
|
scout/server/blueprints/variant/templates/variant/buttons.html,sha256=SnSQhCYiW3lYuZrT22J27OtDaxiVCfWpueOr4jQBOg0,7257
|
605
605
|
scout/server/blueprints/variant/templates/variant/cancer-variant.html,sha256=1D9uLIgb06qfhcbl0wB5mRrgARVgfCJfRZhf4wEA2tc,13971
|
606
|
-
scout/server/blueprints/variant/templates/variant/components.html,sha256=
|
607
|
-
scout/server/blueprints/variant/templates/variant/gene_disease_relations.html,sha256=
|
606
|
+
scout/server/blueprints/variant/templates/variant/components.html,sha256=9XBrMqI3yAJ8iC3ytohTatWnuIXMPdGr3HWIFgMA4_U,20691
|
607
|
+
scout/server/blueprints/variant/templates/variant/gene_disease_relations.html,sha256=9AxW5QE1eZl6c7chNGyJ919kuwV96Du06_2qYwWhm4s,7353
|
608
608
|
scout/server/blueprints/variant/templates/variant/rank_score_results.html,sha256=32RfBrpZ_J-1WYE01Bdd5IC9i1MAzXT7GF27OlElk94,2040
|
609
609
|
scout/server/blueprints/variant/templates/variant/sanger.html,sha256=0kVnscTw3KUwjR4QOEuNJMOK9eADGEn9qGNtGx2ST7Y,4507
|
610
610
|
scout/server/blueprints/variant/templates/variant/str-variant-reviewer.html,sha256=QETzTkzXhFBd7-20OrLMCd1QSgzOxeE7Lv_Iged5BB0,2220
|
@@ -629,15 +629,16 @@ scout/server/blueprints/variants/templates/variants/str-variants.html,sha256=sMM
|
|
629
629
|
scout/server/blueprints/variants/templates/variants/sv-variants.html,sha256=SgAdgIPdr7pd2TDB2PJlXOmSAjX4WUslfm4eu0cjIBI,6310
|
630
630
|
scout/server/blueprints/variants/templates/variants/utils.html,sha256=hK1BBqxvSljBLAGA8mZlEn1RUSXaJQcB-SB_jQviV3E,49371
|
631
631
|
scout/server/blueprints/variants/templates/variants/variants.html,sha256=nfSZXVGmsjjUuRC-54G9UsNBMhlNjnvBafN34uL73tY,9333
|
632
|
-
scout/server/extensions/__init__.py,sha256=
|
632
|
+
scout/server/extensions/__init__.py,sha256=b8BuGfdRWoZXcs_q4Wn9vf30jj5r2GU-YJBpPgAv_nM,1291
|
633
633
|
scout/server/extensions/beacon_extension.py,sha256=YDXQQl5kFcsA4OFHDMVurIKLw_3Gl6yWfcy3lYHl9RE,9904
|
634
634
|
scout/server/extensions/bionano_extension.py,sha256=0rWPLMSCRP8uK4_yozo6HTPR6V-oITF492vrGA3wSj0,7129
|
635
|
-
scout/server/extensions/
|
635
|
+
scout/server/extensions/chanjo2_extension.py,sha256=ZKCIv8muR9bzCV0_rM277ePvxdWC3wuPIwY4VppH7lY,1530
|
636
|
+
scout/server/extensions/chanjo_extension.py,sha256=JtKAgT6ASnCcKYbgKMWGwflISLzHuyDKpcyljzCV_aY,4045
|
636
637
|
scout/server/extensions/clinvar_extension.py,sha256=w1fOzGKRhxmIlZkAqqd_rdGD49qE_nn-tgZsEMTrZNw,3870
|
637
638
|
scout/server/extensions/gens_extension.py,sha256=KOF-pP4DiRVQkygthAq6XCHnZwAGHo1kjIxmvW7ItYI,1003
|
638
639
|
scout/server/extensions/ldap_extension.py,sha256=nVgJ6YhSyvpg8J4bSYzJwoEvKhP0faWazt3Xk0ixE2U,2746
|
639
640
|
scout/server/extensions/loqus_extension.py,sha256=uiqUXQ7Q7DCj6C20TKgL8yLu9DXov95vrJfhq0tvbTM,12602
|
640
|
-
scout/server/extensions/matchmaker_extension.py,sha256=
|
641
|
+
scout/server/extensions/matchmaker_extension.py,sha256=mNytCYnZX1hgdq1otkvnyOkh4dj9SVgQthJAfKb8TMI,5024
|
641
642
|
scout/server/extensions/mongo_extension.py,sha256=bKB0K5ibp-BWynOTgzBJd5qIYO0S9zRtEyDUw7EoxSQ,1029
|
642
643
|
scout/server/extensions/phenopacket_extension.py,sha256=kcEUIOSfkQAlAmUm07hQS1BeUjeN4lBc-InvaNtbFxo,7295
|
643
644
|
scout/server/extensions/rerunner_extension.py,sha256=SEwQi5BZR5X70BoD0U7TfyGgGv2WbJbas0v1efuv_r8,1104
|
@@ -648,7 +649,7 @@ scout/server/static/humans.txt,sha256=UdqAR07_5LAWWfgH2Ty4RR8BhoHS1WXpx9euKtXqqh
|
|
648
649
|
scout/server/static/robots.txt,sha256=fFX0beQN4x3mzR3evnZjrOUYOTNkezYAwqMowTUpmxM,106
|
649
650
|
scout/server/templates/bootstrap_global.html,sha256=yPauZKUzPvDCj6LUrKnCtkYgn7fPt07-Letxqd-hLw8,2634
|
650
651
|
scout/server/templates/layout.html,sha256=-uhRxFA89L0gocv8sPLcODUHmWLNuV6xsjB34Zjq-8o,4635
|
651
|
-
scout/server/templates/report_base.html,sha256=
|
652
|
+
scout/server/templates/report_base.html,sha256=uRSpk-KaE7ZCE0UOGftWH0bGDQVUTU1bpcVKnDKitq0,1335
|
652
653
|
scout/server/templates/utils.html,sha256=Wd-glkGqmfJeusnqi1fIjCBSgUflWh0V3MOAnr5V_MU,13000
|
653
654
|
scout/server/translations/sv/LC_MESSAGES/messages.mo,sha256=eI53pCtlYj1MXduDicMZRxBhgOV_TlmMUpH7IhncgDY,4452
|
654
655
|
scout/server/translations/sv/LC_MESSAGES/messages.po,sha256=Wp7Mx4LoiFNtzsV1tpAoWjMxYnq8SpfpU9a4XWJ7L6g,4531
|
@@ -657,9 +658,9 @@ scout/update/panel.py,sha256=4z-vQ7GVIJXtlIub9pubFcQ-I9mLX5fRXKNPBdpuhJw,1649
|
|
657
658
|
scout/utils/__init__.py,sha256=DHCMH05dxkyD7m9QSs0WXsQQPgVRFQ9XvyNeNpHjjvg,74
|
658
659
|
scout/utils/acmg.py,sha256=xIxOXdzklrBeCCk6lUCqWMjzu5Hj3qmlYO7O5RUY6WA,7609
|
659
660
|
scout/utils/algorithms.py,sha256=w--NauXbQohZis7obr39a8bS57C4NRelYXn79V7m1dU,800
|
660
|
-
scout/utils/convert.py,sha256=
|
661
|
+
scout/utils/convert.py,sha256=asrsis3zkt9jXzseRmCqSa4_t1UT73HPPQRW-DKDdqE,1794
|
661
662
|
scout/utils/coordinates.py,sha256=n8WUFn9zohXfjxgFGryyg6mzdl0zBG8uVCdyjhizSpM,609
|
662
|
-
scout/utils/date.py,sha256=
|
663
|
+
scout/utils/date.py,sha256=GUALqEIgWtbopqC9wJnVKmVm5FRq111iz4RfojUIfG0,1334
|
663
664
|
scout/utils/dict_utils.py,sha256=nstAbMYQD2KNglY69FD0qSfxYM26eM4QDpp_AqHNQ1U,251
|
664
665
|
scout/utils/ensembl_biomart_clients.py,sha256=szth3hpjYYan49URkOxPMp361LgOlv_hr5dsqxJjZDA,1569
|
665
666
|
scout/utils/ensembl_rest_clients.py,sha256=of6CXQHBnwH4ji5URAZcEqVTebxduLs13lBWv2QTIM4,3039
|
@@ -671,9 +672,9 @@ scout/utils/md5.py,sha256=KkgdxOf7xbF9AF40ZjQKCgWaxFWJ9tp9RKjd8SU6IoA,649
|
|
671
672
|
scout/utils/scout_requests.py,sha256=JjHOJW1XmenG05mNQ33kvOKq_IicveIfQMcPZeRcQdo,12856
|
672
673
|
scout/utils/sort.py,sha256=1AcbeZ6vdt_UXM3BLDBa3aQmN4qxrqtskxwD19oBhvw,756
|
673
674
|
scout/utils/track_resources.py,sha256=eUjSEe-Ff8BIb4BHPC_COkJocQO2PaWueiPz1GAuiwY,2614
|
674
|
-
scout_browser-4.
|
675
|
-
scout_browser-4.
|
676
|
-
scout_browser-4.
|
677
|
-
scout_browser-4.
|
678
|
-
scout_browser-4.
|
679
|
-
scout_browser-4.
|
675
|
+
scout_browser-4.89.dist-info/LICENSE,sha256=TM1Y9Cqbwk55JVfxD-_bpGLtZQAeN9RovQlqHK6eOTY,1485
|
676
|
+
scout_browser-4.89.dist-info/METADATA,sha256=N51ZBLfSeqt_rWMckEQocMR34WNvAEXjE8FFyDq321M,14260
|
677
|
+
scout_browser-4.89.dist-info/WHEEL,sha256=eOLhNAGa2EW3wWl_TU484h7q1UNgy0JXjjoqKoxAAQc,92
|
678
|
+
scout_browser-4.89.dist-info/entry_points.txt,sha256=q_mxFwbMFTwXRDDIRVcqKram2ubMVmvs3CSNvZri1nY,45
|
679
|
+
scout_browser-4.89.dist-info/top_level.txt,sha256=qM75h71bztMaLYsxn1up4c_n2rjc_ZnyaW6Q0K5uOXc,6
|
680
|
+
scout_browser-4.89.dist-info/RECORD,,
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|