sclab 0.2.4__py3-none-any.whl → 0.2.5__py3-none-any.whl

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Files changed (6) hide show
  1. sclab/__init__.py +1 -1
  2. sclab/_sclab.py +10 -3
  3. {sclab-0.2.4.dist-info → sclab-0.2.5.dist-info}/METADATA +2 -1
  4. {sclab-0.2.4.dist-info → sclab-0.2.5.dist-info}/RECORD +6 -6
  5. {sclab-0.2.4.dist-info → sclab-0.2.5.dist-info}/WHEEL +0 -0
  6. {sclab-0.2.4.dist-info → sclab-0.2.5.dist-info}/licenses/LICENSE +0 -0
sclab/__init__.py CHANGED
@@ -6,4 +6,4 @@ __all__ = [
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  "SCLabDashboard",
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  ]
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- __version__ = "0.2.4"
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+ __version__ = "0.2.5"
sclab/_sclab.py CHANGED
@@ -1,6 +1,7 @@
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  import inspect
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  from io import BytesIO
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  from pathlib import Path
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+ import tempfile
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  from anndata import AnnData
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  from IPython.display import display
@@ -256,14 +257,20 @@ class DataLoader(VBox):
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  match path.suffix:
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  case ".h5":
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- adata = read_10x_h5(contents)
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+ with tempfile.NamedTemporaryFile(suffix=".h5") as tmp:
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+ tmp.write(contents.getbuffer())
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+ tmp.flush()
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+ adata = read_10x_h5(tmp.name)
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  case ".h5ad":
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- adata = read_h5ad(contents)
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+ with tempfile.NamedTemporaryFile(suffix=".h5ad") as tmp:
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+ tmp.write(contents.getbuffer())
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+ tmp.flush()
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+ adata = read_h5ad(tmp.name)
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  case _:
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  self.upload_info.clear_output()
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  with self.upload_info:
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  print(f"`{filename}` is not valid")
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- print("Please upload a 10x h5 or h5ad file")
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+ print("Please upload a 10x .h5 or .h5ad file")
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  return
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  if var_names in adata.var:
{sclab-0.2.4.dist-info → sclab-0.2.5.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: sclab
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- Version: 0.2.4
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+ Version: 0.2.5
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  Summary: sclab
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  Author-email: Argenis Arriojas <ArriojasMaldonado001@umb.edu>
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  Requires-Python: >=3.10,<3.13
@@ -15,6 +15,7 @@ Requires-Dist: anndata
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  Requires-Dist: anywidget
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  Requires-Dist: ipywidgets
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  Requires-Dist: itables
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+ Requires-Dist: matplotlib
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  Requires-Dist: numpy<2.2
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  Requires-Dist: pandas
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  Requires-Dist: plotly<6.0
{sclab-0.2.4.dist-info → sclab-0.2.5.dist-info}/RECORD RENAMED
@@ -1,7 +1,7 @@
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- sclab/__init__.py,sha256=0XdhioNKeydnAhDycQGD86UAWtEWc9IgYWY4PQKEWPE,132
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+ sclab/__init__.py,sha256=wkce6wEC7pfIGHWjYbTJ0_ZAoXv1zRmeOrtEvuBUp8E,132
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  sclab/_io.py,sha256=5ISxIPbE233UiOt3QEs9fkLO8DLLEe5HrMnZoR-KLYE,2662
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  sclab/_methods_registry.py,sha256=RcffyRuuLzHqsnAdbBL4W1GmZx80d9AxdGjUnx1mbNg,1704
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- sclab/_sclab.py,sha256=kgjChI0h9fVI3sg8O32CJp57KTmoRQ53jGt8eu-_hCQ,8717
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+ sclab/_sclab.py,sha256=-ukFb0bWX5MPZsKnoXBJ9SvKyQpuTK4VUCzmWYnAVNM,9062
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  sclab/dataset/__init__.py,sha256=f9PoXIMAPnC3Var1ODr3mXkotW6u6NRPQvlgcWYXk54,143
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  sclab/dataset/_dataset.py,sha256=dJeiEfo-f6eM866-d53H6FUF9IR-OK4vwDojSq_og0Q,14248
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  sclab/dataset/_exceptions.py,sha256=g8RJL8PiRmD4--PkOs5CZth_qeaduvieMlKJNkrUIYA,45
@@ -39,7 +39,7 @@ sclab/scanpy/readwrite.py,sha256=yixHonShUZ2Ms3Sv3UXw_VXlY00XDApvmyN2mZWFAcs,370
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  sclab/scanpy/plotting/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  sclab/scanpy/plotting/_rcmod.py,sha256=pc53dasHh2RFfTHVTbTb8v1z8vW032zjvum-WQLgjXA,1970
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  sclab/scanpy/plotting/palettes.py,sha256=zHTM_CVfKazb32YreRx0-INllFssZP5rY_B7JTeaBhA,4782
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- sclab-0.2.4.dist-info/licenses/LICENSE,sha256=LO7qldZoHIo9hc-HMBqclBh5800kZ9US9xTbLAQdHpg,1523
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- sclab-0.2.4.dist-info/WHEEL,sha256=G2gURzTEtmeR8nrdXUJfNiB3VYVxigPQ-bEQujpNiNs,82
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- sclab-0.2.4.dist-info/METADATA,sha256=QwxGXc6enzoSEuRb1eEsNNzSn25PCgWk6EQK7hj6VRc,4273
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- sclab-0.2.4.dist-info/RECORD,,
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+ sclab-0.2.5.dist-info/licenses/LICENSE,sha256=LO7qldZoHIo9hc-HMBqclBh5800kZ9US9xTbLAQdHpg,1523
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+ sclab-0.2.5.dist-info/WHEEL,sha256=G2gURzTEtmeR8nrdXUJfNiB3VYVxigPQ-bEQujpNiNs,82
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+ sclab-0.2.5.dist-info/METADATA,sha256=q_ELS5JEz0AuZ9kaN0yHVFM2cHb4pUJ6iXbiMfJHom4,4299
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+ sclab-0.2.5.dist-info/RECORD,,
{sclab-0.2.4.dist-info → sclab-0.2.5.dist-info}/WHEEL RENAMED
File without changes