scitex 2.7.0__py3-none-any.whl → 2.7.3__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scitex/__init__.py +6 -2
- scitex/__version__.py +1 -1
- scitex/audio/README.md +52 -0
- scitex/audio/__init__.py +384 -0
- scitex/audio/__main__.py +129 -0
- scitex/audio/_tts.py +334 -0
- scitex/audio/engines/__init__.py +44 -0
- scitex/audio/engines/base.py +275 -0
- scitex/audio/engines/elevenlabs_engine.py +143 -0
- scitex/audio/engines/gtts_engine.py +162 -0
- scitex/audio/engines/pyttsx3_engine.py +131 -0
- scitex/audio/mcp_server.py +757 -0
- scitex/bridge/_helpers.py +1 -1
- scitex/bridge/_plt_vis.py +1 -1
- scitex/bridge/_stats_vis.py +1 -1
- scitex/dev/plt/__init__.py +272 -0
- scitex/dev/plt/plot_mpl_axhline.py +28 -0
- scitex/dev/plt/plot_mpl_axhspan.py +28 -0
- scitex/dev/plt/plot_mpl_axvline.py +28 -0
- scitex/dev/plt/plot_mpl_axvspan.py +28 -0
- scitex/dev/plt/plot_mpl_bar.py +29 -0
- scitex/dev/plt/plot_mpl_barh.py +29 -0
- scitex/dev/plt/plot_mpl_boxplot.py +28 -0
- scitex/dev/plt/plot_mpl_contour.py +31 -0
- scitex/dev/plt/plot_mpl_contourf.py +31 -0
- scitex/dev/plt/plot_mpl_errorbar.py +30 -0
- scitex/dev/plt/plot_mpl_eventplot.py +28 -0
- scitex/dev/plt/plot_mpl_fill.py +30 -0
- scitex/dev/plt/plot_mpl_fill_between.py +31 -0
- scitex/dev/plt/plot_mpl_hexbin.py +28 -0
- scitex/dev/plt/plot_mpl_hist.py +28 -0
- scitex/dev/plt/plot_mpl_hist2d.py +28 -0
- scitex/dev/plt/plot_mpl_imshow.py +29 -0
- scitex/dev/plt/plot_mpl_pcolormesh.py +31 -0
- scitex/dev/plt/plot_mpl_pie.py +29 -0
- scitex/dev/plt/plot_mpl_plot.py +29 -0
- scitex/dev/plt/plot_mpl_quiver.py +31 -0
- scitex/dev/plt/plot_mpl_scatter.py +28 -0
- scitex/dev/plt/plot_mpl_stackplot.py +31 -0
- scitex/dev/plt/plot_mpl_stem.py +29 -0
- scitex/dev/plt/plot_mpl_step.py +29 -0
- scitex/dev/plt/plot_mpl_violinplot.py +28 -0
- scitex/dev/plt/plot_sns_barplot.py +29 -0
- scitex/dev/plt/plot_sns_boxplot.py +29 -0
- scitex/dev/plt/plot_sns_heatmap.py +28 -0
- scitex/dev/plt/plot_sns_histplot.py +29 -0
- scitex/dev/plt/plot_sns_kdeplot.py +29 -0
- scitex/dev/plt/plot_sns_lineplot.py +31 -0
- scitex/dev/plt/plot_sns_scatterplot.py +29 -0
- scitex/dev/plt/plot_sns_stripplot.py +29 -0
- scitex/dev/plt/plot_sns_swarmplot.py +29 -0
- scitex/dev/plt/plot_sns_violinplot.py +29 -0
- scitex/dev/plt/plot_stx_bar.py +29 -0
- scitex/dev/plt/plot_stx_barh.py +29 -0
- scitex/dev/plt/plot_stx_box.py +28 -0
- scitex/dev/plt/plot_stx_boxplot.py +28 -0
- scitex/dev/plt/plot_stx_conf_mat.py +28 -0
- scitex/dev/plt/plot_stx_contour.py +31 -0
- scitex/dev/plt/plot_stx_ecdf.py +28 -0
- scitex/dev/plt/plot_stx_errorbar.py +30 -0
- scitex/dev/plt/plot_stx_fill_between.py +31 -0
- scitex/dev/plt/plot_stx_fillv.py +28 -0
- scitex/dev/plt/plot_stx_heatmap.py +28 -0
- scitex/dev/plt/plot_stx_image.py +28 -0
- scitex/dev/plt/plot_stx_imshow.py +28 -0
- scitex/dev/plt/plot_stx_joyplot.py +28 -0
- scitex/dev/plt/plot_stx_kde.py +28 -0
- scitex/dev/plt/plot_stx_line.py +28 -0
- scitex/dev/plt/plot_stx_mean_ci.py +28 -0
- scitex/dev/plt/plot_stx_mean_std.py +28 -0
- scitex/dev/plt/plot_stx_median_iqr.py +28 -0
- scitex/dev/plt/plot_stx_raster.py +28 -0
- scitex/dev/plt/plot_stx_rectangle.py +28 -0
- scitex/dev/plt/plot_stx_scatter.py +29 -0
- scitex/dev/plt/plot_stx_shaded_line.py +29 -0
- scitex/dev/plt/plot_stx_violin.py +28 -0
- scitex/dev/plt/plot_stx_violinplot.py +28 -0
- scitex/fig/__init__.py +352 -0
- scitex/{vis → fig}/backend/_parser.py +1 -1
- scitex/{vis → fig}/canvas.py +1 -1
- scitex/{vis → fig}/editor/_defaults.py +70 -5
- scitex/fig/editor/_edit.py +751 -0
- scitex/{vis → fig}/editor/_qt_editor.py +181 -1
- scitex/fig/editor/flask_editor/_bbox.py +1276 -0
- scitex/fig/editor/flask_editor/_core.py +624 -0
- scitex/{vis → fig}/editor/flask_editor/_plotter.py +38 -4
- scitex/fig/editor/flask_editor/_renderer.py +739 -0
- scitex/{vis → fig}/editor/flask_editor/templates/__init__.py +1 -1
- scitex/fig/editor/flask_editor/templates/_html.py +834 -0
- scitex/fig/editor/flask_editor/templates/_scripts.py +3136 -0
- scitex/{vis → fig}/editor/flask_editor/templates/_styles.py +625 -18
- scitex/{vis → fig}/io/__init__.py +13 -1
- scitex/fig/io/_bundle.py +973 -0
- scitex/{vis → fig}/io/_canvas.py +1 -1
- scitex/{vis → fig}/io/_data.py +1 -1
- scitex/{vis → fig}/io/_export.py +1 -1
- scitex/{vis → fig}/io/_load.py +1 -1
- scitex/{vis → fig}/io/_panel.py +1 -1
- scitex/{vis → fig}/io/_save.py +1 -1
- scitex/{vis → fig}/model/__init__.py +1 -1
- scitex/{vis → fig}/model/_annotations.py +1 -1
- scitex/{vis → fig}/model/_axes.py +1 -1
- scitex/{vis → fig}/model/_figure.py +1 -1
- scitex/{vis → fig}/model/_guides.py +1 -1
- scitex/{vis → fig}/model/_plot.py +1 -1
- scitex/{vis → fig}/model/_styles.py +1 -1
- scitex/{vis → fig}/utils/__init__.py +1 -1
- scitex/io/__init__.py +10 -26
- scitex/io/_bundle.py +434 -0
- scitex/io/_flush.py +5 -2
- scitex/io/_load.py +98 -0
- scitex/io/_load_modules/_H5Explorer.py +5 -2
- scitex/io/_load_modules/_canvas.py +2 -2
- scitex/io/_load_modules/_image.py +3 -4
- scitex/io/_load_modules/_txt.py +4 -2
- scitex/io/_metadata.py +34 -324
- scitex/io/_metadata_modules/__init__.py +46 -0
- scitex/io/_metadata_modules/_embed.py +70 -0
- scitex/io/_metadata_modules/_read.py +64 -0
- scitex/io/_metadata_modules/_utils.py +79 -0
- scitex/io/_metadata_modules/embed_metadata_jpeg.py +74 -0
- scitex/io/_metadata_modules/embed_metadata_pdf.py +53 -0
- scitex/io/_metadata_modules/embed_metadata_png.py +26 -0
- scitex/io/_metadata_modules/embed_metadata_svg.py +62 -0
- scitex/io/_metadata_modules/read_metadata_jpeg.py +57 -0
- scitex/io/_metadata_modules/read_metadata_pdf.py +51 -0
- scitex/io/_metadata_modules/read_metadata_png.py +39 -0
- scitex/io/_metadata_modules/read_metadata_svg.py +44 -0
- scitex/io/_qr_utils.py +5 -3
- scitex/io/_save.py +548 -30
- scitex/io/_save_modules/_canvas.py +3 -3
- scitex/io/_save_modules/_image.py +5 -9
- scitex/io/_save_modules/_tex.py +7 -4
- scitex/io/utils/h5_to_zarr.py +11 -9
- scitex/msword/__init__.py +255 -0
- scitex/msword/profiles.py +357 -0
- scitex/msword/reader.py +753 -0
- scitex/msword/utils.py +289 -0
- scitex/msword/writer.py +362 -0
- scitex/plt/__init__.py +5 -2
- scitex/plt/_subplots/_AxesWrapper.py +6 -6
- scitex/plt/_subplots/_AxisWrapper.py +15 -9
- scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin/__init__.py +36 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin/_labels.py +264 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin/_metadata.py +213 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin/_visual.py +128 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin/__init__.py +59 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin/_base.py +34 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin/_scientific.py +593 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin/_statistical.py +654 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin/_stx_aliases.py +527 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_RawMatplotlibMixin.py +321 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin/__init__.py +33 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin/_base.py +152 -0
- scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin/_wrappers.py +600 -0
- scitex/plt/_subplots/_AxisWrapperMixins/__init__.py +79 -5
- scitex/plt/_subplots/_FigWrapper.py +6 -6
- scitex/plt/_subplots/_SubplotsWrapper.py +28 -18
- scitex/plt/_subplots/_export_as_csv.py +35 -5
- scitex/plt/_subplots/_export_as_csv_formatters/__init__.py +8 -0
- scitex/plt/_subplots/_export_as_csv_formatters/_format_annotate.py +10 -21
- scitex/plt/_subplots/_export_as_csv_formatters/_format_eventplot.py +18 -7
- scitex/plt/_subplots/_export_as_csv_formatters/_format_imshow2d.py +28 -12
- scitex/plt/_subplots/_export_as_csv_formatters/_format_matshow.py +10 -4
- scitex/plt/_subplots/_export_as_csv_formatters/_format_plot_imshow.py +13 -1
- scitex/plt/_subplots/_export_as_csv_formatters/_format_plot_kde.py +12 -2
- scitex/plt/_subplots/_export_as_csv_formatters/_format_plot_scatter.py +10 -3
- scitex/plt/_subplots/_export_as_csv_formatters/_format_quiver.py +10 -4
- scitex/plt/_subplots/_export_as_csv_formatters/_format_sns_jointplot.py +18 -3
- scitex/plt/_subplots/_export_as_csv_formatters/_format_sns_lineplot.py +44 -36
- scitex/plt/_subplots/_export_as_csv_formatters/_format_sns_pairplot.py +14 -2
- scitex/plt/_subplots/_export_as_csv_formatters/_format_streamplot.py +11 -5
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_bar.py +84 -0
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_barh.py +85 -0
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_conf_mat.py +14 -3
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_contour.py +54 -0
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_ecdf.py +14 -2
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_errorbar.py +120 -0
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_heatmap.py +16 -6
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_image.py +29 -19
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_imshow.py +63 -0
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_joyplot.py +22 -5
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_mean_ci.py +18 -14
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_mean_std.py +18 -14
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_median_iqr.py +18 -14
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_raster.py +10 -2
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_scatter.py +51 -0
- scitex/plt/_subplots/_export_as_csv_formatters/_format_stx_scatter_hist.py +18 -9
- scitex/plt/ax/_plot/_stx_ecdf.py +4 -2
- scitex/plt/gallery/_generate.py +421 -14
- scitex/plt/io/__init__.py +53 -0
- scitex/plt/io/_bundle.py +490 -0
- scitex/plt/io/_layered_bundle.py +1343 -0
- scitex/plt/styles/SCITEX_STYLE.yaml +26 -0
- scitex/plt/styles/__init__.py +14 -0
- scitex/plt/styles/presets.py +78 -0
- scitex/plt/utils/__init__.py +13 -1
- scitex/plt/utils/_collect_figure_metadata.py +10 -14
- scitex/plt/utils/_configure_mpl.py +6 -18
- scitex/plt/utils/_crop.py +32 -14
- scitex/plt/utils/_csv_column_naming.py +54 -0
- scitex/plt/utils/_figure_mm.py +116 -1
- scitex/plt/utils/_hitmap.py +1643 -0
- scitex/plt/utils/metadata/__init__.py +25 -0
- scitex/plt/utils/metadata/_core.py +9 -10
- scitex/plt/utils/metadata/_dimensions.py +6 -3
- scitex/plt/utils/metadata/_editable_export.py +405 -0
- scitex/plt/utils/metadata/_geometry_extraction.py +570 -0
- scitex/schema/__init__.py +109 -16
- scitex/schema/_canvas.py +1 -1
- scitex/schema/_plot.py +1015 -0
- scitex/schema/_stats.py +2 -2
- scitex/stats/__init__.py +117 -0
- scitex/stats/io/__init__.py +29 -0
- scitex/stats/io/_bundle.py +156 -0
- scitex/tex/__init__.py +4 -0
- scitex/tex/_export.py +890 -0
- {scitex-2.7.0.dist-info → scitex-2.7.3.dist-info}/METADATA +11 -1
- {scitex-2.7.0.dist-info → scitex-2.7.3.dist-info}/RECORD +238 -170
- scitex/io/memo.md +0 -2827
- scitex/plt/REQUESTS.md +0 -191
- scitex/plt/_subplots/TODO.md +0 -53
- scitex/plt/_subplots/_AxisWrapperMixins/_AdjustmentMixin.py +0 -559
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin.py +0 -1609
- scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin.py +0 -447
- scitex/plt/templates/research-master/scitex/vis/gallery/area/fill_between.json +0 -110
- scitex/plt/templates/research-master/scitex/vis/gallery/area/fill_betweenx.json +0 -88
- scitex/plt/templates/research-master/scitex/vis/gallery/area/stx_fill_between.json +0 -103
- scitex/plt/templates/research-master/scitex/vis/gallery/area/stx_fillv.json +0 -106
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/bar.json +0 -92
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/barh.json +0 -92
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/boxplot.json +0 -92
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/stx_bar.json +0 -84
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/stx_barh.json +0 -84
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/stx_box.json +0 -83
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/stx_boxplot.json +0 -93
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/stx_violin.json +0 -91
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/stx_violinplot.json +0 -91
- scitex/plt/templates/research-master/scitex/vis/gallery/categorical/violinplot.json +0 -91
- scitex/plt/templates/research-master/scitex/vis/gallery/contour/contour.json +0 -97
- scitex/plt/templates/research-master/scitex/vis/gallery/contour/contourf.json +0 -98
- scitex/plt/templates/research-master/scitex/vis/gallery/contour/stx_contour.json +0 -84
- scitex/plt/templates/research-master/scitex/vis/gallery/distribution/hist.json +0 -101
- scitex/plt/templates/research-master/scitex/vis/gallery/distribution/hist2d.json +0 -96
- scitex/plt/templates/research-master/scitex/vis/gallery/distribution/stx_ecdf.json +0 -95
- scitex/plt/templates/research-master/scitex/vis/gallery/distribution/stx_joyplot.json +0 -95
- scitex/plt/templates/research-master/scitex/vis/gallery/distribution/stx_kde.json +0 -93
- scitex/plt/templates/research-master/scitex/vis/gallery/grid/imshow.json +0 -95
- scitex/plt/templates/research-master/scitex/vis/gallery/grid/matshow.json +0 -95
- scitex/plt/templates/research-master/scitex/vis/gallery/grid/stx_conf_mat.json +0 -83
- scitex/plt/templates/research-master/scitex/vis/gallery/grid/stx_heatmap.json +0 -92
- scitex/plt/templates/research-master/scitex/vis/gallery/grid/stx_image.json +0 -121
- scitex/plt/templates/research-master/scitex/vis/gallery/grid/stx_imshow.json +0 -84
- scitex/plt/templates/research-master/scitex/vis/gallery/line/plot.json +0 -110
- scitex/plt/templates/research-master/scitex/vis/gallery/line/step.json +0 -92
- scitex/plt/templates/research-master/scitex/vis/gallery/line/stx_line.json +0 -95
- scitex/plt/templates/research-master/scitex/vis/gallery/line/stx_shaded_line.json +0 -96
- scitex/plt/templates/research-master/scitex/vis/gallery/scatter/hexbin.json +0 -95
- scitex/plt/templates/research-master/scitex/vis/gallery/scatter/scatter.json +0 -95
- scitex/plt/templates/research-master/scitex/vis/gallery/scatter/stem.json +0 -92
- scitex/plt/templates/research-master/scitex/vis/gallery/scatter/stx_scatter.json +0 -84
- scitex/plt/templates/research-master/scitex/vis/gallery/special/pie.json +0 -94
- scitex/plt/templates/research-master/scitex/vis/gallery/special/stx_raster.json +0 -109
- scitex/plt/templates/research-master/scitex/vis/gallery/special/stx_rectangle.json +0 -108
- scitex/plt/templates/research-master/scitex/vis/gallery/statistical/errorbar.json +0 -93
- scitex/plt/templates/research-master/scitex/vis/gallery/statistical/stx_errorbar.json +0 -84
- scitex/plt/templates/research-master/scitex/vis/gallery/statistical/stx_mean_ci.json +0 -96
- scitex/plt/templates/research-master/scitex/vis/gallery/statistical/stx_mean_std.json +0 -96
- scitex/plt/templates/research-master/scitex/vis/gallery/statistical/stx_median_iqr.json +0 -96
- scitex/plt/templates/research-master/scitex/vis/gallery/vector/quiver.json +0 -99
- scitex/plt/templates/research-master/scitex/vis/gallery/vector/streamplot.json +0 -100
- scitex/vis/__init__.py +0 -177
- scitex/vis/editor/_edit.py +0 -390
- scitex/vis/editor/flask_editor/_bbox.py +0 -529
- scitex/vis/editor/flask_editor/_core.py +0 -168
- scitex/vis/editor/flask_editor/_renderer.py +0 -393
- scitex/vis/editor/flask_editor/templates/_html.py +0 -513
- scitex/vis/editor/flask_editor/templates/_scripts.py +0 -1261
- /scitex/{vis → fig}/README.md +0 -0
- /scitex/{vis → fig}/backend/__init__.py +0 -0
- /scitex/{vis → fig}/backend/_export.py +0 -0
- /scitex/{vis → fig}/backend/_render.py +0 -0
- /scitex/{vis → fig}/docs/CANVAS_ARCHITECTURE.md +0 -0
- /scitex/{vis → fig}/editor/__init__.py +0 -0
- /scitex/{vis → fig}/editor/_dearpygui_editor.py +0 -0
- /scitex/{vis → fig}/editor/_flask_editor.py +0 -0
- /scitex/{vis → fig}/editor/_mpl_editor.py +0 -0
- /scitex/{vis → fig}/editor/_tkinter_editor.py +0 -0
- /scitex/{vis → fig}/editor/flask_editor/__init__.py +0 -0
- /scitex/{vis → fig}/editor/flask_editor/_utils.py +0 -0
- /scitex/{vis → fig}/io/_directory.py +0 -0
- /scitex/{vis → fig}/model/_plot_types.py +0 -0
- /scitex/{vis → fig}/utils/_defaults.py +0 -0
- /scitex/{vis → fig}/utils/_validate.py +0 -0
- {scitex-2.7.0.dist-info → scitex-2.7.3.dist-info}/WHEEL +0 -0
- {scitex-2.7.0.dist-info → scitex-2.7.3.dist-info}/entry_points.txt +0 -0
- {scitex-2.7.0.dist-info → scitex-2.7.3.dist-info}/licenses/LICENSE +0 -0
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20
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21
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# mm to pt conversion factor
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22
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MM_TO_PT = 2.83465
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23
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-
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24
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-
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25
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def render_preview_with_bboxes(
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26
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csv_data, overrides: Dict[str, Any], axis_fontsize: int = 7,
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27
|
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metadata: Optional[Dict[str, Any]] = None,
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28
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) -> Tuple[str, Dict[str, Any], Dict[str, int]]:
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29
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"""Render figure and return base64 PNG along with element bounding boxes.
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30
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-
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31
|
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Args:
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32
|
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csv_data: DataFrame containing CSV data
|
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33
|
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overrides: Dictionary with override settings
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34
|
-
axis_fontsize: Default font size for axis labels
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35
|
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metadata: Optional JSON metadata (new schema with axes dict)
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36
|
-
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37
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-
Returns:
|
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38
|
-
tuple: (base64_image_data, bboxes_dict, image_size)
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39
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-
"""
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40
|
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# Check if this is a multi-axis figure (new schema)
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41
|
-
if metadata and "axes" in metadata and isinstance(metadata.get("axes"), dict):
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|
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return render_multi_axis_preview(csv_data, overrides, metadata)
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43
|
-
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44
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# Fall back to single-axis rendering
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45
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return render_single_axis_preview(csv_data, overrides, axis_fontsize)
|
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46
|
-
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47
|
-
|
|
48
|
-
def render_single_axis_preview(
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49
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csv_data, overrides: Dict[str, Any], axis_fontsize: int = 7
|
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50
|
-
) -> Tuple[str, Dict[str, Any], Dict[str, int]]:
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51
|
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"""Render single-axis figure (legacy mode)."""
|
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52
|
-
o = overrides
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53
|
-
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54
|
-
# Dimensions
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|
55
|
-
dpi = o.get("dpi", 300)
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56
|
-
fig_size = o.get("fig_size", [3.15, 2.68])
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57
|
-
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58
|
-
# Font sizes
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|
59
|
-
axis_fontsize = o.get("axis_fontsize", 7)
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60
|
-
tick_fontsize = o.get("tick_fontsize", 7)
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61
|
-
title_fontsize = o.get("title_fontsize", 8)
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62
|
-
|
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63
|
-
# Line/axis thickness
|
|
64
|
-
linewidth_pt = o.get("linewidth", 0.57)
|
|
65
|
-
axis_width_pt = o.get("axis_width", 0.2) * MM_TO_PT
|
|
66
|
-
tick_length_pt = o.get("tick_length", 0.8) * MM_TO_PT
|
|
67
|
-
tick_width_pt = o.get("tick_width", 0.2) * MM_TO_PT
|
|
68
|
-
tick_direction = o.get("tick_direction", "out")
|
|
69
|
-
x_n_ticks = o.get("x_n_ticks", o.get("n_ticks", 4))
|
|
70
|
-
y_n_ticks = o.get("y_n_ticks", o.get("n_ticks", 4))
|
|
71
|
-
hide_x_ticks = o.get("hide_x_ticks", False)
|
|
72
|
-
hide_y_ticks = o.get("hide_y_ticks", False)
|
|
73
|
-
|
|
74
|
-
transparent = o.get("transparent", True)
|
|
75
|
-
|
|
76
|
-
# Create figure
|
|
77
|
-
fig, ax = plt.subplots(figsize=fig_size, dpi=dpi)
|
|
78
|
-
_apply_background(fig, ax, o, transparent)
|
|
79
|
-
|
|
80
|
-
# Plot from CSV data
|
|
81
|
-
if csv_data is not None:
|
|
82
|
-
plot_from_csv(ax, csv_data, overrides, linewidth=linewidth_pt)
|
|
83
|
-
else:
|
|
84
|
-
ax.text(
|
|
85
|
-
0.5,
|
|
86
|
-
0.5,
|
|
87
|
-
"No plot data available\n(CSV not found)",
|
|
88
|
-
ha="center",
|
|
89
|
-
va="center",
|
|
90
|
-
transform=ax.transAxes,
|
|
91
|
-
fontsize=axis_fontsize,
|
|
92
|
-
)
|
|
93
|
-
|
|
94
|
-
# Apply labels
|
|
95
|
-
_apply_labels(ax, o, title_fontsize, axis_fontsize)
|
|
96
|
-
|
|
97
|
-
# Tick styling
|
|
98
|
-
_apply_tick_styling(
|
|
99
|
-
ax,
|
|
100
|
-
tick_fontsize,
|
|
101
|
-
tick_length_pt,
|
|
102
|
-
tick_width_pt,
|
|
103
|
-
tick_direction,
|
|
104
|
-
x_n_ticks,
|
|
105
|
-
y_n_ticks,
|
|
106
|
-
hide_x_ticks,
|
|
107
|
-
hide_y_ticks,
|
|
108
|
-
)
|
|
109
|
-
|
|
110
|
-
# Apply grid, limits, spines
|
|
111
|
-
_apply_style(ax, o, axis_width_pt)
|
|
112
|
-
|
|
113
|
-
# Apply annotations
|
|
114
|
-
_apply_annotations(ax, o, axis_fontsize)
|
|
115
|
-
|
|
116
|
-
fig.tight_layout()
|
|
117
|
-
|
|
118
|
-
# Get element bounding boxes BEFORE saving (need renderer)
|
|
119
|
-
fig.canvas.draw()
|
|
120
|
-
renderer = fig.canvas.get_renderer()
|
|
121
|
-
|
|
122
|
-
# Save to buffer first to get actual image size
|
|
123
|
-
buf = io.BytesIO()
|
|
124
|
-
fig.savefig(
|
|
125
|
-
buf, format="png", dpi=dpi, bbox_inches="tight", transparent=transparent
|
|
126
|
-
)
|
|
127
|
-
buf.seek(0)
|
|
128
|
-
|
|
129
|
-
# Get actual saved image dimensions
|
|
130
|
-
img = Image.open(buf)
|
|
131
|
-
img_width, img_height = img.size
|
|
132
|
-
buf.seek(0)
|
|
133
|
-
|
|
134
|
-
# Get bboxes
|
|
135
|
-
bboxes = extract_bboxes(fig, ax, renderer, img_width, img_height)
|
|
136
|
-
|
|
137
|
-
img_data = base64.b64encode(buf.read()).decode("utf-8")
|
|
138
|
-
plt.close(fig)
|
|
139
|
-
|
|
140
|
-
return img_data, bboxes, {"width": img_width, "height": img_height}
|
|
141
|
-
|
|
142
|
-
|
|
143
|
-
def render_multi_axis_preview(
|
|
144
|
-
csv_data, overrides: Dict[str, Any], metadata: Dict[str, Any]
|
|
145
|
-
) -> Tuple[str, Dict[str, Any], Dict[str, int]]:
|
|
146
|
-
"""Render multi-axis figure from new schema (scitex.plt.figure.recipe).
|
|
147
|
-
|
|
148
|
-
Args:
|
|
149
|
-
csv_data: DataFrame containing CSV data
|
|
150
|
-
overrides: Dictionary with override settings
|
|
151
|
-
metadata: JSON metadata with axes dict
|
|
152
|
-
|
|
153
|
-
Returns:
|
|
154
|
-
tuple: (base64_image_data, bboxes_dict, image_size)
|
|
155
|
-
"""
|
|
156
|
-
o = overrides
|
|
157
|
-
axes_spec = metadata.get("axes", {})
|
|
158
|
-
fig_spec = metadata.get("figure", {})
|
|
159
|
-
|
|
160
|
-
# Get grid dimensions from axes positions
|
|
161
|
-
nrows, ncols = _get_grid_dimensions(axes_spec)
|
|
162
|
-
|
|
163
|
-
# Figure dimensions
|
|
164
|
-
dpi = fig_spec.get("dpi", o.get("dpi", 300))
|
|
165
|
-
size_mm = fig_spec.get("size_mm", [176, 106])
|
|
166
|
-
# Convert mm to inches (1 inch = 25.4 mm)
|
|
167
|
-
fig_size = (size_mm[0] / 25.4, size_mm[1] / 25.4)
|
|
168
|
-
|
|
169
|
-
# Font sizes (from overrides)
|
|
170
|
-
axis_fontsize = o.get("axis_fontsize", 7)
|
|
171
|
-
tick_fontsize = o.get("tick_fontsize", 7)
|
|
172
|
-
title_fontsize = o.get("title_fontsize", 8)
|
|
173
|
-
|
|
174
|
-
# Line/axis thickness
|
|
175
|
-
linewidth_pt = o.get("linewidth", 0.57)
|
|
176
|
-
axis_width_pt = o.get("axis_width", 0.2) * MM_TO_PT
|
|
177
|
-
tick_length_pt = o.get("tick_length", 0.8) * MM_TO_PT
|
|
178
|
-
tick_width_pt = o.get("tick_width", 0.2) * MM_TO_PT
|
|
179
|
-
tick_direction = o.get("tick_direction", "out")
|
|
180
|
-
x_n_ticks = o.get("x_n_ticks", o.get("n_ticks", 4))
|
|
181
|
-
y_n_ticks = o.get("y_n_ticks", o.get("n_ticks", 4))
|
|
182
|
-
|
|
183
|
-
transparent = o.get("transparent", True)
|
|
184
|
-
|
|
185
|
-
# Create multi-axis figure
|
|
186
|
-
fig, axes_array = plt.subplots(nrows, ncols, figsize=fig_size, dpi=dpi)
|
|
187
|
-
|
|
188
|
-
# Handle 1D or 2D array
|
|
189
|
-
if nrows == 1 and ncols == 1:
|
|
190
|
-
axes_array = np.array([[axes_array]])
|
|
191
|
-
elif nrows == 1:
|
|
192
|
-
axes_array = axes_array.reshape(1, -1)
|
|
193
|
-
elif ncols == 1:
|
|
194
|
-
axes_array = axes_array.reshape(-1, 1)
|
|
195
|
-
|
|
196
|
-
# Apply background to figure
|
|
197
|
-
if transparent:
|
|
198
|
-
fig.patch.set_facecolor("none")
|
|
199
|
-
elif o.get("facecolor"):
|
|
200
|
-
fig.patch.set_facecolor(o["facecolor"])
|
|
201
|
-
|
|
202
|
-
# Map axes by their ID
|
|
203
|
-
axes_map = {}
|
|
204
|
-
for ax_id, ax_spec in axes_spec.items():
|
|
205
|
-
pos = ax_spec.get("grid_position", {})
|
|
206
|
-
row = pos.get("row", 0)
|
|
207
|
-
col = pos.get("col", 0)
|
|
208
|
-
ax = axes_array[row, col]
|
|
209
|
-
axes_map[ax_id] = ax
|
|
210
|
-
|
|
211
|
-
# Apply background
|
|
212
|
-
if transparent:
|
|
213
|
-
ax.patch.set_facecolor("none")
|
|
214
|
-
elif o.get("facecolor"):
|
|
215
|
-
ax.patch.set_facecolor(o["facecolor"])
|
|
216
|
-
|
|
217
|
-
# Plot data from recipe
|
|
218
|
-
if csv_data is not None:
|
|
219
|
-
plot_from_recipe(ax, csv_data, ax_spec, overrides, linewidth_pt, ax_id=ax_id)
|
|
220
|
-
|
|
221
|
-
# Get panel-specific overrides (e.g., ax_00_panel)
|
|
222
|
-
panel_key = f"{ax_id}_panel"
|
|
223
|
-
element_overrides = o.get("element_overrides", {})
|
|
224
|
-
panel_overrides = element_overrides.get(panel_key, {})
|
|
225
|
-
|
|
226
|
-
# Apply axis labels from spec, with panel overrides taking precedence
|
|
227
|
-
xaxis = ax_spec.get("xaxis", {})
|
|
228
|
-
yaxis = ax_spec.get("yaxis", {})
|
|
229
|
-
|
|
230
|
-
# Panel title (from overrides or spec)
|
|
231
|
-
panel_title = panel_overrides.get("title")
|
|
232
|
-
if panel_title:
|
|
233
|
-
ax.set_title(panel_title, fontsize=title_fontsize)
|
|
234
|
-
|
|
235
|
-
# X/Y labels (panel overrides take precedence over spec)
|
|
236
|
-
xlabel = panel_overrides.get("xlabel") or xaxis.get("label")
|
|
237
|
-
ylabel = panel_overrides.get("ylabel") or yaxis.get("label")
|
|
238
|
-
|
|
239
|
-
if xlabel:
|
|
240
|
-
ax.set_xlabel(xlabel, fontsize=axis_fontsize)
|
|
241
|
-
if ylabel:
|
|
242
|
-
ax.set_ylabel(ylabel, fontsize=axis_fontsize)
|
|
243
|
-
|
|
244
|
-
# Apply axis limits
|
|
245
|
-
if xaxis.get("lim"):
|
|
246
|
-
ax.set_xlim(xaxis["lim"])
|
|
247
|
-
if yaxis.get("lim"):
|
|
248
|
-
ax.set_ylim(yaxis["lim"])
|
|
249
|
-
|
|
250
|
-
# Tick styling
|
|
251
|
-
_apply_tick_styling(
|
|
252
|
-
ax,
|
|
253
|
-
tick_fontsize,
|
|
254
|
-
tick_length_pt,
|
|
255
|
-
tick_width_pt,
|
|
256
|
-
tick_direction,
|
|
257
|
-
x_n_ticks,
|
|
258
|
-
y_n_ticks,
|
|
259
|
-
False, # hide_x_ticks
|
|
260
|
-
False, # hide_y_ticks
|
|
261
|
-
)
|
|
262
|
-
|
|
263
|
-
# Apply spines
|
|
264
|
-
if o.get("hide_top_spine", True):
|
|
265
|
-
ax.spines["top"].set_visible(False)
|
|
266
|
-
if o.get("hide_right_spine", True):
|
|
267
|
-
ax.spines["right"].set_visible(False)
|
|
268
|
-
for spine in ax.spines.values():
|
|
269
|
-
spine.set_linewidth(axis_width_pt)
|
|
270
|
-
|
|
271
|
-
fig.tight_layout()
|
|
272
|
-
|
|
273
|
-
# Get element bounding boxes
|
|
274
|
-
fig.canvas.draw()
|
|
275
|
-
renderer = fig.canvas.get_renderer()
|
|
276
|
-
|
|
277
|
-
# Save to buffer
|
|
278
|
-
buf = io.BytesIO()
|
|
279
|
-
fig.savefig(
|
|
280
|
-
buf, format="png", dpi=dpi, bbox_inches="tight", transparent=transparent
|
|
281
|
-
)
|
|
282
|
-
buf.seek(0)
|
|
283
|
-
|
|
284
|
-
# Get actual saved image dimensions
|
|
285
|
-
img = Image.open(buf)
|
|
286
|
-
img_width, img_height = img.size
|
|
287
|
-
buf.seek(0)
|
|
288
|
-
|
|
289
|
-
# Get bboxes for all axes
|
|
290
|
-
bboxes = extract_bboxes_multi(fig, axes_map, renderer, img_width, img_height)
|
|
291
|
-
|
|
292
|
-
img_data = base64.b64encode(buf.read()).decode("utf-8")
|
|
293
|
-
plt.close(fig)
|
|
294
|
-
|
|
295
|
-
return img_data, bboxes, {"width": img_width, "height": img_height}
|
|
296
|
-
|
|
297
|
-
|
|
298
|
-
def _get_grid_dimensions(axes_spec: Dict[str, Any]) -> Tuple[int, int]:
|
|
299
|
-
"""Get grid dimensions from axes specifications."""
|
|
300
|
-
max_row = 0
|
|
301
|
-
max_col = 0
|
|
302
|
-
for ax_id, ax_spec in axes_spec.items():
|
|
303
|
-
pos = ax_spec.get("grid_position", {})
|
|
304
|
-
max_row = max(max_row, pos.get("row", 0))
|
|
305
|
-
max_col = max(max_col, pos.get("col", 0))
|
|
306
|
-
return max_row + 1, max_col + 1
|
|
307
|
-
|
|
308
|
-
|
|
309
|
-
def _apply_background(fig, ax, o, transparent):
|
|
310
|
-
"""Apply background settings to figure."""
|
|
311
|
-
if transparent:
|
|
312
|
-
fig.patch.set_facecolor("none")
|
|
313
|
-
ax.patch.set_facecolor("none")
|
|
314
|
-
elif o.get("facecolor"):
|
|
315
|
-
fig.patch.set_facecolor(o["facecolor"])
|
|
316
|
-
ax.patch.set_facecolor(o["facecolor"])
|
|
317
|
-
|
|
318
|
-
|
|
319
|
-
def _apply_labels(ax, o, title_fontsize, axis_fontsize):
|
|
320
|
-
"""Apply title and axis labels."""
|
|
321
|
-
if o.get("title"):
|
|
322
|
-
ax.set_title(o["title"], fontsize=title_fontsize)
|
|
323
|
-
if o.get("xlabel"):
|
|
324
|
-
ax.set_xlabel(o["xlabel"], fontsize=axis_fontsize)
|
|
325
|
-
if o.get("ylabel"):
|
|
326
|
-
ax.set_ylabel(o["ylabel"], fontsize=axis_fontsize)
|
|
327
|
-
|
|
328
|
-
|
|
329
|
-
def _apply_tick_styling(
|
|
330
|
-
ax,
|
|
331
|
-
tick_fontsize,
|
|
332
|
-
tick_length_pt,
|
|
333
|
-
tick_width_pt,
|
|
334
|
-
tick_direction,
|
|
335
|
-
x_n_ticks,
|
|
336
|
-
y_n_ticks,
|
|
337
|
-
hide_x_ticks,
|
|
338
|
-
hide_y_ticks,
|
|
339
|
-
):
|
|
340
|
-
"""Apply tick styling to axes."""
|
|
341
|
-
ax.tick_params(
|
|
342
|
-
axis="both",
|
|
343
|
-
labelsize=tick_fontsize,
|
|
344
|
-
length=tick_length_pt,
|
|
345
|
-
width=tick_width_pt,
|
|
346
|
-
direction=tick_direction,
|
|
347
|
-
)
|
|
348
|
-
|
|
349
|
-
if hide_x_ticks:
|
|
350
|
-
ax.xaxis.set_ticks([])
|
|
351
|
-
ax.xaxis.set_ticklabels([])
|
|
352
|
-
else:
|
|
353
|
-
ax.xaxis.set_major_locator(MaxNLocator(nbins=x_n_ticks))
|
|
354
|
-
if hide_y_ticks:
|
|
355
|
-
ax.yaxis.set_ticks([])
|
|
356
|
-
ax.yaxis.set_ticklabels([])
|
|
357
|
-
else:
|
|
358
|
-
ax.yaxis.set_major_locator(MaxNLocator(nbins=y_n_ticks))
|
|
359
|
-
|
|
360
|
-
|
|
361
|
-
def _apply_style(ax, o, axis_width_pt):
|
|
362
|
-
"""Apply grid, axis limits, and spine settings."""
|
|
363
|
-
if o.get("grid"):
|
|
364
|
-
ax.grid(True, linewidth=axis_width_pt, alpha=0.3)
|
|
365
|
-
|
|
366
|
-
if o.get("xlim"):
|
|
367
|
-
ax.set_xlim(o["xlim"])
|
|
368
|
-
if o.get("ylim"):
|
|
369
|
-
ax.set_ylim(o["ylim"])
|
|
370
|
-
|
|
371
|
-
if o.get("hide_top_spine", True):
|
|
372
|
-
ax.spines["top"].set_visible(False)
|
|
373
|
-
if o.get("hide_right_spine", True):
|
|
374
|
-
ax.spines["right"].set_visible(False)
|
|
375
|
-
|
|
376
|
-
for spine in ax.spines.values():
|
|
377
|
-
spine.set_linewidth(axis_width_pt)
|
|
378
|
-
|
|
379
|
-
|
|
380
|
-
def _apply_annotations(ax, o, axis_fontsize):
|
|
381
|
-
"""Apply text annotations to figure."""
|
|
382
|
-
for annot in o.get("annotations", []):
|
|
383
|
-
if annot.get("type") == "text":
|
|
384
|
-
ax.text(
|
|
385
|
-
annot.get("x", 0.5),
|
|
386
|
-
annot.get("y", 0.5),
|
|
387
|
-
annot.get("text", ""),
|
|
388
|
-
transform=ax.transAxes,
|
|
389
|
-
fontsize=annot.get("fontsize", axis_fontsize),
|
|
390
|
-
)
|
|
391
|
-
|
|
392
|
-
|
|
393
|
-
# EOF
|