scitex 2.16.0__py3-none-any.whl → 2.16.1__py3-none-any.whl

scitex/writer/utils/_converters.py

@@ -1,635 +0,0 @@
-#!/usr/bin/env python3
-# Timestamp: 2026-01-09
-# File: src/scitex/writer/utils/_converters.py
-# ----------------------------------------
-
-"""
-Conversion utilities for writer module.
-
-Provides:
-- CSV <-> LaTeX table conversion
-- PDF page to image rendering
-- Figure format conversion
-"""
-
-from __future__ import annotations
-
-import re
-import tempfile
-from pathlib import Path
-from typing import Any, Dict, List, Optional, Union
-
-from scitex import logging
-
-logger = logging.getLogger(__name__)
-
-
-# =============================================================================
-# CSV <-> LaTeX Table Converters
-# =============================================================================
-
-
-def csv2latex(
-    csv_path: Union[str, Path],
-    output_path: Optional[Union[str, Path]] = None,
-    caption: Optional[str] = None,
-    label: Optional[str] = None,
-    escape: bool = True,
-    longtable: bool = False,
-    index: bool = False,
-    column_format: Optional[str] = None,
-    **kwargs,
-) -> str:
-    """
-    Convert CSV file to LaTeX table.
-
-    Parameters
-    ----------
-    csv_path : str or Path
-        Path to CSV file
-    output_path : str or Path, optional
-        If provided, save LaTeX to this file
-    caption : str, optional
-        Table caption
-    label : str, optional
-        Table label for referencing
-    escape : bool, default True
-        Escape special LaTeX characters
-    longtable : bool, default False
-        Use longtable environment for multi-page tables
-    index : bool, default False
-        Include DataFrame index in output
-    column_format : str, optional
-        LaTeX column format (e.g., 'lcr', 'l|cc|r')
-    **kwargs
-        Additional arguments passed to pandas.DataFrame.to_latex()
-
-    Returns
-    -------
-    str
-        LaTeX table string
-
-    Examples
-    --------
-    >>> latex = csv2latex("data.csv", caption="Results", label="tab:results")
-    >>> csv2latex("data.csv", "table.tex")  # Save to file
-    """
-    import pandas as pd
-
-    csv_path = Path(csv_path)
-    if not csv_path.exists():
-        raise FileNotFoundError(f"CSV file not found: {csv_path}")
-
-    # Load CSV
-    df = pd.read_csv(csv_path)
-
-    # Build to_latex arguments
-    latex_kwargs = {
-        "index": index,
-        "escape": escape,
-        "caption": caption,
-        "label": label,
-    }
-
-    if longtable:
-        latex_kwargs["longtable"] = True
-
-    if column_format:
-        latex_kwargs["column_format"] = column_format
-
-    # Merge with user kwargs
-    latex_kwargs.update(kwargs)
-
-    # Convert to LaTeX
-    latex_content = df.to_latex(**latex_kwargs)
-
-    # Save if output path provided
-    if output_path:
-        output_path = Path(output_path)
-        output_path.parent.mkdir(parents=True, exist_ok=True)
-        with open(output_path, "w") as f:
-            f.write(latex_content)
-        logger.info(f"Saved LaTeX table to {output_path}")
-
-    return latex_content
-
-
-def latex2csv(
-    latex_path: Union[str, Path],
-    output_path: Optional[Union[str, Path]] = None,
-    table_index: int = 0,
-) -> pd.DataFrame:
-    """
-    Convert LaTeX table to CSV/DataFrame.
-
-    Parameters
-    ----------
-    latex_path : str or Path
-        Path to LaTeX file containing table
-    output_path : str or Path, optional
-        If provided, save CSV to this file
-    table_index : int, default 0
-        Which table to extract if multiple tables exist
-
-    Returns
-    -------
-    pd.DataFrame
-        Extracted table as DataFrame
-
-    Examples
-    --------
-    >>> df = latex2csv("table.tex")
-    >>> df = latex2csv("table.tex", "output.csv")
-    """
-    import pandas as pd
-
-    latex_path = Path(latex_path)
-    if not latex_path.exists():
-        raise FileNotFoundError(f"LaTeX file not found: {latex_path}")
-
-    with open(latex_path) as f:
-        content = f.read()
-
-    # Extract table content (between \begin{tabular} and \end{tabular})
-    # Also handle longtable
-    patterns = [
-        r"\\begin\{tabular\}.*?\n(.*?)\\end\{tabular\}",
-        r"\\begin\{longtable\}.*?\n(.*?)\\end\{longtable\}",
-    ]
-
-    tables = []
-    for pattern in patterns:
-        matches = re.findall(pattern, content, re.DOTALL)
-        tables.extend(matches)
-
-    if not tables:
-        raise ValueError("No table found in LaTeX file")
-
-    if table_index >= len(tables):
-        raise IndexError(
-            f"Table index {table_index} out of range. Found {len(tables)} tables."
-        )
-
-    table_content = tables[table_index]
-
-    # Parse table rows
-    rows = []
-    for line in table_content.split("\n"):
-        line = line.strip()
-        if not line or line.startswith("\\"):
-            continue
-        if "&" in line:
-            # Remove trailing \\ and split by &
-            line = re.sub(r"\\\\.*$", "", line)
-            cells = [cell.strip() for cell in line.split("&")]
-            rows.append(cells)
-
-    if not rows:
-        raise ValueError("Could not parse table rows")
-
-    # Create DataFrame (first row as header if it looks like headers)
-    if len(rows) > 1:
-        df = pd.DataFrame(rows[1:], columns=rows[0])
-    else:
-        df = pd.DataFrame(rows)
-
-    # Save if output path provided
-    if output_path:
-        output_path = Path(output_path)
-        output_path.parent.mkdir(parents=True, exist_ok=True)
-        df.to_csv(output_path, index=False)
-        logger.info(f"Saved CSV to {output_path}")
-
-    return df
-
-
-# =============================================================================
-# PDF to Image Rendering
-# =============================================================================
-
-
-def pdf_to_images(
-    pdf_path: Union[str, Path],
-    output_dir: Optional[Union[str, Path]] = None,
-    pages: Optional[Union[int, List[int]]] = None,
-    dpi: int = 150,
-    format: str = "png",
-    prefix: str = "page",
-) -> List[Dict[str, Any]]:
-    """
-    Render PDF pages as images.
-
-    Parameters
-    ----------
-    pdf_path : str or Path
-        Path to PDF file
-    output_dir : str or Path, optional
-        Directory to save images. If None, uses temp directory.
-    pages : int or list of int, optional
-        Page(s) to render (0-indexed). If None, renders all pages.
-    dpi : int, default 150
-        Resolution in DPI
-    format : str, default 'png'
-        Output format ('png', 'jpg', 'jpeg')
-    prefix : str, default 'page'
-        Filename prefix
-
-    Returns
-    -------
-    list of dict
-        List of dicts with image info:
-        - page: Page number (0-indexed)
-        - path: Path to saved image
-        - width: Image width in pixels
-        - height: Image height in pixels
-
-    Examples
-    --------
-    >>> # Render first page as thumbnail
-    >>> images = pdf_to_images("paper.pdf", pages=0, dpi=72)
-    >>> print(images[0]['path'])
-
-    >>> # Render all pages at high resolution
-    >>> images = pdf_to_images("paper.pdf", "output/", dpi=300)
-    """
-    try:
-        import fitz  # PyMuPDF
-    except ImportError:
-        raise ImportError(
-            "PyMuPDF required for PDF to image conversion. "
-            "Install with: pip install PyMuPDF"
-        )
-
-    pdf_path = Path(pdf_path)
-    if not pdf_path.exists():
-        raise FileNotFoundError(f"PDF file not found: {pdf_path}")
-
-    # Setup output directory
-    if output_dir is None:
-        output_dir = Path(tempfile.mkdtemp(prefix="pdf_images_"))
-    else:
-        output_dir = Path(output_dir)
-        output_dir.mkdir(parents=True, exist_ok=True)
-
-    # Normalize format
-    format = format.lower()
-    if format == "jpeg":
-        format = "jpg"
-
-    # Calculate zoom factor for DPI (default PDF DPI is 72)
-    zoom = dpi / 72.0
-    matrix = fitz.Matrix(zoom, zoom)
-
-    results = []
-    doc = fitz.open(pdf_path)
-
-    try:
-        if pages is None:
-            pages_to_render = range(len(doc))
-        elif isinstance(pages, int):
-            pages_to_render = [pages]
-        else:
-            pages_to_render = pages
-
-        for page_num in pages_to_render:
-            if page_num < 0 or page_num >= len(doc):
-                logger.warning(f"Page {page_num} out of range, skipping")
-                continue
-
-            pdf_page = doc[page_num]
-            pix = pdf_page.get_pixmap(matrix=matrix)
-
-            # Generate filename
-            filename = f"{prefix}_{page_num + 1:03d}.{format}"
-            filepath = output_dir / filename
-
-            # Save image
-            if format == "png":
-                pix.save(str(filepath))
-            else:  # jpg
-                # Convert to RGB if needed and save as JPEG
-                try:
-                    import io
-
-                    from PIL import Image
-
-                    img_data = pix.tobytes("png")
-                    img = Image.open(io.BytesIO(img_data))
-                    if img.mode in ("RGBA", "LA", "P"):
-                        background = Image.new("RGB", img.size, (255, 255, 255))
-                        if img.mode == "P":
-                            img = img.convert("RGBA")
-                        if img.mode == "RGBA":
-                            background.paste(img, mask=img.split()[-1])
-                        else:
-                            background.paste(img)
-                        img = background
-                    elif img.mode != "RGB":
-                        img = img.convert("RGB")
-                    img.save(str(filepath), "JPEG", quality=95)
-                except ImportError:
-                    # Fallback to PNG if PIL not available
-                    filepath = filepath.with_suffix(".png")
-                    pix.save(str(filepath))
-                    format = "png"
-
-            results.append(
-                {
-                    "page": page_num,
-                    "path": str(filepath),
-                    "width": pix.width,
-                    "height": pix.height,
-                    "dpi": dpi,
-                    "format": format,
-                }
-            )
-
-            logger.debug(f"Rendered page {page_num + 1} to {filepath}")
-
-    finally:
-        doc.close()
-
-    logger.info(f"Rendered {len(results)} pages from {pdf_path}")
-    return results
-
-
-def pdf_thumbnail(
-    pdf_path: Union[str, Path],
-    output_path: Optional[Union[str, Path]] = None,
-    page: int = 0,
-    width: int = 200,
-    format: str = "png",
-) -> Dict[str, Any]:
-    """
-    Generate a thumbnail from a PDF page.
-
-    Parameters
-    ----------
-    pdf_path : str or Path
-        Path to PDF file
-    output_path : str or Path, optional
-        Path to save thumbnail. If None, auto-generates.
-    page : int, default 0
-        Page to use for thumbnail (0-indexed)
-    width : int, default 200
-        Thumbnail width in pixels (height auto-calculated)
-    format : str, default 'png'
-        Output format ('png', 'jpg')
-
-    Returns
-    -------
-    dict
-        Thumbnail info with path, width, height
-
-    Examples
-    --------
-    >>> thumb = pdf_thumbnail("paper.pdf")
-    >>> print(thumb['path'])
-    """
-    try:
-        import fitz
-    except ImportError:
-        raise ImportError(
-            "PyMuPDF required for PDF thumbnails. Install with: pip install PyMuPDF"
-        )
-
-    pdf_path = Path(pdf_path)
-    if not pdf_path.exists():
-        raise FileNotFoundError(f"PDF file not found: {pdf_path}")
-
-    doc = fitz.open(pdf_path)
-
-    try:
-        if page < 0 or page >= len(doc):
-            raise IndexError(f"Page {page} out of range. PDF has {len(doc)} pages.")
-
-        pdf_page = doc[page]
-
-        # Calculate zoom to achieve desired width
-        page_rect = pdf_page.rect
-        zoom = width / page_rect.width
-        matrix = fitz.Matrix(zoom, zoom)
-
-        pix = pdf_page.get_pixmap(matrix=matrix)
-
-        # Determine output path
-        if output_path is None:
-            output_dir = Path(tempfile.mkdtemp(prefix="pdf_thumb_"))
-            output_path = output_dir / f"{pdf_path.stem}_thumb.{format}"
-        else:
-            output_path = Path(output_path)
-            output_path.parent.mkdir(parents=True, exist_ok=True)
-
-        # Save
-        pix.save(str(output_path))
-
-        return {
-            "path": str(output_path),
-            "width": pix.width,
-            "height": pix.height,
-            "source_page": page,
-            "source_pdf": str(pdf_path),
-            "format": format,
-        }
-
-    finally:
-        doc.close()
-
-
-# =============================================================================
-# Figure Handlers
-# =============================================================================
-
-
-def list_figures(
-    project_dir: Union[str, Path],
-    extensions: Optional[List[str]] = None,
-) -> List[Dict[str, Any]]:
-    """
-    List all figures in a writer project.
-
-    Parameters
-    ----------
-    project_dir : str or Path
-        Path to writer project directory
-    extensions : list of str, optional
-        Figure extensions to include. Default: common image formats.
-
-    Returns
-    -------
-    list of dict
-        List of figure info dicts with path, name, size, etc.
-
-    Examples
-    --------
-    >>> figures = list_figures("my_paper")
-    >>> for fig in figures:
-    ...     print(fig['name'], fig['size_kb'])
-    """
-    project_dir = Path(project_dir)
-    if not project_dir.exists():
-        raise FileNotFoundError(f"Project directory not found: {project_dir}")
-
-    if extensions is None:
-        extensions = [
-            ".png",
-            ".jpg",
-            ".jpeg",
-            ".pdf",
-            ".eps",
-            ".svg",
-            ".tif",
-            ".tiff",
-            ".ppt",
-            ".pptx",
-        ]
-
-    # Search in common figure locations
-    figure_dirs = [
-        project_dir / "00_shared" / "figures",
-        project_dir / "00_shared" / "figs",
-        project_dir / "01_manuscript" / "figures",
-        project_dir / "01_manuscript" / "figs",
-        project_dir / "02_supplementary" / "figures",
-        project_dir / "02_supplementary" / "figs",
-    ]
-
-    figures = []
-    for fig_dir in figure_dirs:
-        if fig_dir.exists():
-            for ext in extensions:
-                for filepath in fig_dir.glob(f"*{ext}"):
-                    stat = filepath.stat()
-                    figures.append(
-                        {
-                            "path": str(filepath),
-                            "name": filepath.name,
-                            "stem": filepath.stem,
-                            "extension": filepath.suffix,
-                            "size_bytes": stat.st_size,
-                            "size_kb": round(stat.st_size / 1024, 2),
-                            "directory": str(fig_dir),
-                            "relative_path": str(filepath.relative_to(project_dir)),
-                        }
-                    )
-
-    # Sort by name
-    figures.sort(key=lambda x: x["name"])
-
-    logger.info(f"Found {len(figures)} figures in {project_dir}")
-    return figures
-
-
-def convert_figure(
-    input_path: Union[str, Path],
-    output_path: Union[str, Path],
-    dpi: int = 300,
-    quality: int = 95,
-) -> Dict[str, Any]:
-    """
-    Convert figure between formats.
-
-    Parameters
-    ----------
-    input_path : str or Path
-        Input figure path
-    output_path : str or Path
-        Output figure path (format determined by extension)
-    dpi : int, default 300
-        Resolution for rasterization (PDF/SVG to raster)
-    quality : int, default 95
-        JPEG quality (1-100)
-
-    Returns
-    -------
-    dict
-        Conversion result with paths and sizes
-
-    Examples
-    --------
-    >>> convert_figure("fig1.pdf", "fig1.png", dpi=300)
-    >>> convert_figure("fig1.png", "fig1.jpg", quality=90)
-    """
-    from PIL import Image
-
-    input_path = Path(input_path)
-    output_path = Path(output_path)
-
-    if not input_path.exists():
-        raise FileNotFoundError(f"Input file not found: {input_path}")
-
-    output_path.parent.mkdir(parents=True, exist_ok=True)
-
-    input_ext = input_path.suffix.lower()
-    output_ext = output_path.suffix.lower()
-
-    # Handle PDF input
-    if input_ext == ".pdf":
-        try:
-            import fitz
-
-            doc = fitz.open(input_path)
-            page = doc[0]
-            zoom = dpi / 72.0
-            matrix = fitz.Matrix(zoom, zoom)
-            pix = page.get_pixmap(matrix=matrix)
-
-            if output_ext in [".jpg", ".jpeg"]:
-                # Save as PNG first, then convert
-                import io
-
-                img_data = pix.tobytes("png")
-                img = Image.open(io.BytesIO(img_data))
-                if img.mode != "RGB":
-                    img = img.convert("RGB")
-                img.save(str(output_path), "JPEG", quality=quality)
-            else:
-                pix.save(str(output_path))
-
-            doc.close()
-        except ImportError:
-            raise ImportError("PyMuPDF required for PDF conversion")
-    else:
-        # Standard image conversion with PIL
-        img = Image.open(input_path)
-
-        # Handle format-specific conversions
-        if output_ext in [".jpg", ".jpeg"]:
-            if img.mode in ("RGBA", "LA", "P"):
-                background = Image.new("RGB", img.size, (255, 255, 255))
-                if img.mode == "P":
-                    img = img.convert("RGBA")
-                if img.mode == "RGBA":
-                    background.paste(img, mask=img.split()[-1])
-                else:
-                    background.paste(img)
-                img = background
-            elif img.mode != "RGB":
-                img = img.convert("RGB")
-            img.save(str(output_path), "JPEG", quality=quality)
-        else:
-            img.save(str(output_path))
-
-    # Get output size
-    output_stat = output_path.stat()
-
-    return {
-        "input_path": str(input_path),
-        "output_path": str(output_path),
-        "input_size_kb": round(input_path.stat().st_size / 1024, 2),
-        "output_size_kb": round(output_stat.st_size / 1024, 2),
-        "dpi": dpi,
-        "quality": quality if output_ext in [".jpg", ".jpeg"] else None,
-    }
-
-
-__all__ = [
-    "csv2latex",
-    "latex2csv",
-    "pdf_to_images",
-    "pdf_thumbnail",
-    "list_figures",
-    "convert_figure",
-]
-
-# EOF