scitex 2.14.0__py3-none-any.whl

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Files changed (2498) hide show
  1. scitex/.mcp.json +46 -0
  2. scitex/__init__.py +268 -0
  3. scitex/__main__.py +45 -0
  4. scitex/__version__.py +16 -0
  5. scitex/_install_guide.py +262 -0
  6. scitex/_mcp_tools/__init__.py +36 -0
  7. scitex/_mcp_tools/audio.py +134 -0
  8. scitex/_mcp_tools/canvas.py +128 -0
  9. scitex/_mcp_tools/capture.py +174 -0
  10. scitex/_mcp_tools/diagram.py +106 -0
  11. scitex/_mcp_tools/plt.py +350 -0
  12. scitex/_mcp_tools/scholar.py +373 -0
  13. scitex/_mcp_tools/stats.py +206 -0
  14. scitex/_mcp_tools/template.py +66 -0
  15. scitex/_mcp_tools/ui.py +80 -0
  16. scitex/_mcp_tools/writer.py +220 -0
  17. scitex/_optional_deps.py +333 -0
  18. scitex/ai/README.md +295 -0
  19. scitex/ai/__init__.py +74 -0
  20. scitex/ai/_gen_ai/_Anthropic.py +173 -0
  21. scitex/ai/_gen_ai/_BaseGenAI.py +337 -0
  22. scitex/ai/_gen_ai/_DeepSeek.py +183 -0
  23. scitex/ai/_gen_ai/_Google.py +162 -0
  24. scitex/ai/_gen_ai/_Groq.py +95 -0
  25. scitex/ai/_gen_ai/_Llama.py +144 -0
  26. scitex/ai/_gen_ai/_OpenAI.py +235 -0
  27. scitex/ai/_gen_ai/_PARAMS.py +552 -0
  28. scitex/ai/_gen_ai/_Perplexity.py +207 -0
  29. scitex/ai/_gen_ai/__init__.py +44 -0
  30. scitex/ai/_gen_ai/_calc_cost.py +78 -0
  31. scitex/ai/_gen_ai/_format_output_func.py +185 -0
  32. scitex/ai/_gen_ai/_genai_factory.py +71 -0
  33. scitex/ai/activation/__init__.py +8 -0
  34. scitex/ai/activation/_define.py +11 -0
  35. scitex/ai/classification/Classifier.py +131 -0
  36. scitex/ai/classification/CrossValidationExperiment.py +368 -0
  37. scitex/ai/classification/README.md +251 -0
  38. scitex/ai/classification/__init__.py +46 -0
  39. scitex/ai/classification/examples/timeseries_cv_demo.py +416 -0
  40. scitex/ai/classification/examples/verify_multi/config.json +13 -0
  41. scitex/ai/classification/examples/verify_multi/multi_task_comparison.md +20 -0
  42. scitex/ai/classification/examples/verify_multi/multi_task_validation.json +103 -0
  43. scitex/ai/classification/examples/verify_multi/paper_export/README.md +20 -0
  44. scitex/ai/classification/examples/verify_multi/paper_export/raw_results.json +174 -0
  45. scitex/ai/classification/examples/verify_multi/task1/metadata.json +56 -0
  46. scitex/ai/classification/examples/verify_multi/task1/paper_export/README.md +20 -0
  47. scitex/ai/classification/examples/verify_multi/task1/paper_export/raw_results.json +93 -0
  48. scitex/ai/classification/examples/verify_multi/task1/paper_export/summary_table.tex +15 -0
  49. scitex/ai/classification/examples/verify_multi/task1/report.md +31 -0
  50. scitex/ai/classification/examples/verify_multi/task1/validation_report.json +47 -0
  51. scitex/ai/classification/examples/verify_multi/task2/metadata.json +56 -0
  52. scitex/ai/classification/examples/verify_multi/task2/paper_export/README.md +20 -0
  53. scitex/ai/classification/examples/verify_multi/task2/paper_export/raw_results.json +93 -0
  54. scitex/ai/classification/examples/verify_multi/task2/paper_export/summary_table.tex +15 -0
  55. scitex/ai/classification/examples/verify_multi/task2/report.md +31 -0
  56. scitex/ai/classification/examples/verify_multi/task2/validation_report.json +47 -0
  57. scitex/ai/classification/examples/verify_test/metadata.json +62 -0
  58. scitex/ai/classification/examples/verify_test/paper_export/README.md +20 -0
  59. scitex/ai/classification/examples/verify_test/paper_export/raw_results.json +131 -0
  60. scitex/ai/classification/examples/verify_test/paper_export/summary_table.tex +15 -0
  61. scitex/ai/classification/examples/verify_test/report.md +31 -0
  62. scitex/ai/classification/examples/verify_test/validation_report.json +52 -0
  63. scitex/ai/classification/reporters/_BaseClassificationReporter.py +283 -0
  64. scitex/ai/classification/reporters/_ClassificationReporter.py +758 -0
  65. scitex/ai/classification/reporters/_MultiClassificationReporter.py +403 -0
  66. scitex/ai/classification/reporters/_SingleClassificationReporter.py +1778 -0
  67. scitex/ai/classification/reporters/__init__.py +11 -0
  68. scitex/ai/classification/reporters/reporter_utils/_Plotter.py +1122 -0
  69. scitex/ai/classification/reporters/reporter_utils/__init__.py +72 -0
  70. scitex/ai/classification/reporters/reporter_utils/aggregation.py +439 -0
  71. scitex/ai/classification/reporters/reporter_utils/data_models.py +321 -0
  72. scitex/ai/classification/reporters/reporter_utils/reporting.py +1223 -0
  73. scitex/ai/classification/reporters/reporter_utils/storage.py +224 -0
  74. scitex/ai/classification/reporters/reporter_utils/validation.py +382 -0
  75. scitex/ai/classification/timeseries/README.md +313 -0
  76. scitex/ai/classification/timeseries/_TimeSeriesBlockingSplit.py +643 -0
  77. scitex/ai/classification/timeseries/_TimeSeriesCalendarSplit.py +732 -0
  78. scitex/ai/classification/timeseries/_TimeSeriesMetadata.py +139 -0
  79. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +1640 -0
  80. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit_v01-not-using-n_splits.py +1609 -0
  81. scitex/ai/classification/timeseries/_TimeSeriesStrategy.py +83 -0
  82. scitex/ai/classification/timeseries/_TimeSeriesStratifiedSplit.py +697 -0
  83. scitex/ai/classification/timeseries/__init__.py +37 -0
  84. scitex/ai/classification/timeseries/_normalize_timestamp.py +439 -0
  85. scitex/ai/classification/timeseries/run_all.sh +30 -0
  86. scitex/ai/clustering/__init__.py +11 -0
  87. scitex/ai/clustering/_pca.py +114 -0
  88. scitex/ai/clustering/_umap.py +375 -0
  89. scitex/ai/feature_extraction/__init__.py +58 -0
  90. scitex/ai/feature_extraction/vit.py +148 -0
  91. scitex/ai/feature_selection/__init__.py +30 -0
  92. scitex/ai/feature_selection/feature_selection.py +359 -0
  93. scitex/ai/loss/_L1L2Losses.py +34 -0
  94. scitex/ai/loss/__init__.py +12 -0
  95. scitex/ai/loss/multi_task_loss.py +47 -0
  96. scitex/ai/metrics/__init__.py +56 -0
  97. scitex/ai/metrics/_calc_bacc.py +61 -0
  98. scitex/ai/metrics/_calc_bacc_from_conf_mat.py +38 -0
  99. scitex/ai/metrics/_calc_clf_report.py +78 -0
  100. scitex/ai/metrics/_calc_conf_mat.py +95 -0
  101. scitex/ai/metrics/_calc_feature_importance.py +179 -0
  102. scitex/ai/metrics/_calc_mcc.py +61 -0
  103. scitex/ai/metrics/_calc_pre_rec_auc.py +116 -0
  104. scitex/ai/metrics/_calc_roc_auc.py +112 -0
  105. scitex/ai/metrics/_calc_seizure_prediction_metrics.py +505 -0
  106. scitex/ai/metrics/_calc_silhouette_score.py +501 -0
  107. scitex/ai/metrics/_normalize_labels.py +83 -0
  108. scitex/ai/optim/MIGRATION.md +43 -0
  109. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/LICENSE +201 -0
  110. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/README.md +80 -0
  111. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/__init__.py +0 -0
  112. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/__init__.py +3 -0
  113. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger.py +204 -0
  114. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger2020.py +235 -0
  115. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/ranger913A.py +212 -0
  116. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger/rangerqh.py +184 -0
  117. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger-init.jpg +0 -0
  118. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/ranger-with-gc-options.jpg +0 -0
  119. scitex/ai/optim/Ranger_Deep_Learning_Optimizer/setup.py +24 -0
  120. scitex/ai/optim/__init__.py +13 -0
  121. scitex/ai/optim/_get_set.py +31 -0
  122. scitex/ai/optim/_optimizers.py +71 -0
  123. scitex/ai/plt/__init__.py +65 -0
  124. scitex/ai/plt/_plot_feature_importance.py +321 -0
  125. scitex/ai/plt/_plot_learning_curve.py +330 -0
  126. scitex/ai/plt/_plot_optuna_study.py +226 -0
  127. scitex/ai/plt/_plot_pre_rec_curve.py +284 -0
  128. scitex/ai/plt/_plot_roc_curve.py +253 -0
  129. scitex/ai/plt/_stx_conf_mat.py +662 -0
  130. scitex/ai/sampling/undersample.py +44 -0
  131. scitex/ai/sk/__init__.py +11 -0
  132. scitex/ai/sk/_clf.py +58 -0
  133. scitex/ai/sk/_to_sktime.py +100 -0
  134. scitex/ai/sklearn/__init__.py +26 -0
  135. scitex/ai/sklearn/clf.py +58 -0
  136. scitex/ai/sklearn/to_sktime.py +100 -0
  137. scitex/ai/training/_EarlyStopping.py +149 -0
  138. scitex/ai/training/_LearningCurveLogger.py +552 -0
  139. scitex/ai/training/__init__.py +7 -0
  140. scitex/ai/utils/__init__.py +22 -0
  141. scitex/ai/utils/_check_params.py +49 -0
  142. scitex/ai/utils/_default_dataset.py +46 -0
  143. scitex/ai/utils/_format_samples_for_sktime.py +26 -0
  144. scitex/ai/utils/_label_encoder.py +134 -0
  145. scitex/ai/utils/_merge_labels.py +22 -0
  146. scitex/ai/utils/_sliding_window_data_augmentation.py +11 -0
  147. scitex/ai/utils/_under_sample.py +51 -0
  148. scitex/ai/utils/_verify_n_gpus.py +16 -0
  149. scitex/ai/utils/grid_search.py +148 -0
  150. scitex/audio/README.md +129 -0
  151. scitex/audio/__init__.py +392 -0
  152. scitex/audio/__main__.py +125 -0
  153. scitex/audio/_cross_process_lock.py +139 -0
  154. scitex/audio/_mcp/__init__.py +4 -0
  155. scitex/audio/_mcp/handlers.py +366 -0
  156. scitex/audio/_mcp/tool_schemas.py +203 -0
  157. scitex/audio/_tts.py +334 -0
  158. scitex/audio/engines/__init__.py +44 -0
  159. scitex/audio/engines/base.py +275 -0
  160. scitex/audio/engines/elevenlabs_engine.py +146 -0
  161. scitex/audio/engines/gtts_engine.py +162 -0
  162. scitex/audio/engines/pyttsx3_engine.py +131 -0
  163. scitex/audio/mcp_server.py +293 -0
  164. scitex/benchmark/__init__.py +42 -0
  165. scitex/benchmark/benchmark.py +407 -0
  166. scitex/benchmark/monitor.py +380 -0
  167. scitex/benchmark/profiler.py +300 -0
  168. scitex/bridge/__init__.py +121 -0
  169. scitex/bridge/_figrecipe.py +277 -0
  170. scitex/bridge/_helpers.py +150 -0
  171. scitex/bridge/_plt_vis.py +542 -0
  172. scitex/bridge/_protocol.py +283 -0
  173. scitex/bridge/_stats_plt.py +272 -0
  174. scitex/bridge/_stats_vis.py +281 -0
  175. scitex/browser/README.md +167 -0
  176. scitex/browser/__init__.py +139 -0
  177. scitex/browser/auth/__init__.py +35 -0
  178. scitex/browser/auth/google.py +386 -0
  179. scitex/browser/automation/CookieHandler.py +215 -0
  180. scitex/browser/automation/__init__.py +11 -0
  181. scitex/browser/collaboration/__init__.py +62 -0
  182. scitex/browser/collaboration/auth_helpers.py +96 -0
  183. scitex/browser/collaboration/collaborative_agent.py +138 -0
  184. scitex/browser/collaboration/credential_manager.py +188 -0
  185. scitex/browser/collaboration/interactive_panel.py +400 -0
  186. scitex/browser/collaboration/persistent_browser.py +170 -0
  187. scitex/browser/collaboration/shared_session.py +392 -0
  188. scitex/browser/collaboration/standard_interactions.py +247 -0
  189. scitex/browser/collaboration/visual_feedback.py +181 -0
  190. scitex/browser/core/BrowserMixin.py +321 -0
  191. scitex/browser/core/ChromeProfileManager.py +438 -0
  192. scitex/browser/core/__init__.py +18 -0
  193. scitex/browser/debugging/__init__.py +74 -0
  194. scitex/browser/debugging/_browser_logger.py +644 -0
  195. scitex/browser/debugging/_failure_capture.py +379 -0
  196. scitex/browser/debugging/_highlight_element.py +152 -0
  197. scitex/browser/debugging/_show_grid.py +153 -0
  198. scitex/browser/debugging/_sync_session.py +260 -0
  199. scitex/browser/debugging/_test_monitor.py +293 -0
  200. scitex/browser/debugging/_visual_cursor.py +443 -0
  201. scitex/browser/docs/ABOUT_PLAYWRIGHT.md +49 -0
  202. scitex/browser/interaction/__init__.py +24 -0
  203. scitex/browser/interaction/click_center.py +150 -0
  204. scitex/browser/interaction/click_with_fallbacks.py +203 -0
  205. scitex/browser/interaction/close_popups.py +511 -0
  206. scitex/browser/interaction/fill_with_fallbacks.py +209 -0
  207. scitex/browser/pdf/__init__.py +16 -0
  208. scitex/browser/pdf/click_download_for_chrome_pdf_viewer.py +201 -0
  209. scitex/browser/pdf/detect_chrome_pdf_viewer.py +195 -0
  210. scitex/browser/remote/CaptchaHandler.py +447 -0
  211. scitex/browser/remote/ZenRowsAPIClient.py +341 -0
  212. scitex/browser/remote/ZenRowsBrowserManager.py +596 -0
  213. scitex/browser/remote/__init__.py +11 -0
  214. scitex/browser/stealth/HumanBehavior.py +339 -0
  215. scitex/browser/stealth/StealthManager.py +993 -0
  216. scitex/browser/stealth/__init__.py +9 -0
  217. scitex/canvas/README.md +386 -0
  218. scitex/canvas/__init__.py +340 -0
  219. scitex/canvas/_mcp/__init__.py +4 -0
  220. scitex/canvas/_mcp/handlers.py +372 -0
  221. scitex/canvas/_mcp/tool_schemas.py +219 -0
  222. scitex/canvas/backend/__init__.py +56 -0
  223. scitex/canvas/backend/_export.py +166 -0
  224. scitex/canvas/backend/_parser.py +188 -0
  225. scitex/canvas/backend/_render.py +385 -0
  226. scitex/canvas/canvas.py +434 -0
  227. scitex/canvas/docs/CANVAS_ARCHITECTURE.md +307 -0
  228. scitex/canvas/editor/__init__.py +26 -0
  229. scitex/canvas/editor/_dearpygui_editor.py +1976 -0
  230. scitex/canvas/editor/_defaults.py +300 -0
  231. scitex/canvas/editor/_flask_editor.py +37 -0
  232. scitex/canvas/editor/_mpl_editor.py +246 -0
  233. scitex/canvas/editor/_qt_editor.py +1096 -0
  234. scitex/canvas/editor/_tkinter_editor.py +523 -0
  235. scitex/canvas/editor/edit/__init__.py +47 -0
  236. scitex/canvas/editor/edit/backend_detector.py +109 -0
  237. scitex/canvas/editor/edit/bundle_resolver.py +248 -0
  238. scitex/canvas/editor/edit/editor_launcher.py +292 -0
  239. scitex/canvas/editor/edit/manual_handler.py +53 -0
  240. scitex/canvas/editor/edit/panel_loader.py +246 -0
  241. scitex/canvas/editor/edit/path_resolver.py +67 -0
  242. scitex/canvas/editor/flask_editor/__init__.py +21 -0
  243. scitex/canvas/editor/flask_editor/_bbox.py +1340 -0
  244. scitex/canvas/editor/flask_editor/_core.py +1688 -0
  245. scitex/canvas/editor/flask_editor/_plotter.py +601 -0
  246. scitex/canvas/editor/flask_editor/_renderer.py +854 -0
  247. scitex/canvas/editor/flask_editor/_utils.py +80 -0
  248. scitex/canvas/editor/flask_editor/static/css/base/reset.css +41 -0
  249. scitex/canvas/editor/flask_editor/static/css/base/typography.css +16 -0
  250. scitex/canvas/editor/flask_editor/static/css/base/variables.css +85 -0
  251. scitex/canvas/editor/flask_editor/static/css/components/buttons.css +217 -0
  252. scitex/canvas/editor/flask_editor/static/css/components/context-menu.css +93 -0
  253. scitex/canvas/editor/flask_editor/static/css/components/dropdown.css +57 -0
  254. scitex/canvas/editor/flask_editor/static/css/components/forms.css +112 -0
  255. scitex/canvas/editor/flask_editor/static/css/components/modal.css +59 -0
  256. scitex/canvas/editor/flask_editor/static/css/components/sections.css +212 -0
  257. scitex/canvas/editor/flask_editor/static/css/features/canvas.css +176 -0
  258. scitex/canvas/editor/flask_editor/static/css/features/element-inspector.css +190 -0
  259. scitex/canvas/editor/flask_editor/static/css/features/loading.css +59 -0
  260. scitex/canvas/editor/flask_editor/static/css/features/overlay.css +45 -0
  261. scitex/canvas/editor/flask_editor/static/css/features/panel-grid.css +95 -0
  262. scitex/canvas/editor/flask_editor/static/css/features/selection.css +101 -0
  263. scitex/canvas/editor/flask_editor/static/css/features/statistics.css +138 -0
  264. scitex/canvas/editor/flask_editor/static/css/index.css +31 -0
  265. scitex/canvas/editor/flask_editor/static/css/layout/container.css +7 -0
  266. scitex/canvas/editor/flask_editor/static/css/layout/controls.css +56 -0
  267. scitex/canvas/editor/flask_editor/static/css/layout/preview.css +78 -0
  268. scitex/canvas/editor/flask_editor/static/js/alignment/axis.js +314 -0
  269. scitex/canvas/editor/flask_editor/static/js/alignment/basic.js +107 -0
  270. scitex/canvas/editor/flask_editor/static/js/alignment/distribute.js +54 -0
  271. scitex/canvas/editor/flask_editor/static/js/canvas/canvas.js +172 -0
  272. scitex/canvas/editor/flask_editor/static/js/canvas/dragging.js +258 -0
  273. scitex/canvas/editor/flask_editor/static/js/canvas/resize.js +48 -0
  274. scitex/canvas/editor/flask_editor/static/js/canvas/selection.js +71 -0
  275. scitex/canvas/editor/flask_editor/static/js/core/api.js +287 -0
  276. scitex/canvas/editor/flask_editor/static/js/core/state.js +143 -0
  277. scitex/canvas/editor/flask_editor/static/js/core/utils.js +245 -0
  278. scitex/canvas/editor/flask_editor/static/js/dev/element-inspector.js +992 -0
  279. scitex/canvas/editor/flask_editor/static/js/editor/bbox.js +339 -0
  280. scitex/canvas/editor/flask_editor/static/js/editor/element-drag.js +286 -0
  281. scitex/canvas/editor/flask_editor/static/js/editor/overlay.js +371 -0
  282. scitex/canvas/editor/flask_editor/static/js/editor/preview.js +293 -0
  283. scitex/canvas/editor/flask_editor/static/js/main.js +426 -0
  284. scitex/canvas/editor/flask_editor/static/js/shortcuts/context-menu.js +152 -0
  285. scitex/canvas/editor/flask_editor/static/js/shortcuts/keyboard.js +265 -0
  286. scitex/canvas/editor/flask_editor/static/js/ui/controls.js +184 -0
  287. scitex/canvas/editor/flask_editor/static/js/ui/download.js +57 -0
  288. scitex/canvas/editor/flask_editor/static/js/ui/help.js +100 -0
  289. scitex/canvas/editor/flask_editor/static/js/ui/theme.js +34 -0
  290. scitex/canvas/editor/flask_editor/templates/__init__.py +123 -0
  291. scitex/canvas/editor/flask_editor/templates/_html.py +852 -0
  292. scitex/canvas/editor/flask_editor/templates/_scripts.py +4933 -0
  293. scitex/canvas/editor/flask_editor/templates/_styles.py +1658 -0
  294. scitex/canvas/io/__init__.py +105 -0
  295. scitex/canvas/io/_bundle.py +1121 -0
  296. scitex/canvas/io/_canvas.py +230 -0
  297. scitex/canvas/io/_data.py +208 -0
  298. scitex/canvas/io/_directory.py +205 -0
  299. scitex/canvas/io/_export.py +463 -0
  300. scitex/canvas/io/_load.py +168 -0
  301. scitex/canvas/io/_panel.py +432 -0
  302. scitex/canvas/io/_save.py +131 -0
  303. scitex/canvas/mcp_server.py +151 -0
  304. scitex/canvas/model/__init__.py +118 -0
  305. scitex/canvas/model/_annotations.py +116 -0
  306. scitex/canvas/model/_axes.py +153 -0
  307. scitex/canvas/model/_figure.py +139 -0
  308. scitex/canvas/model/_guides.py +105 -0
  309. scitex/canvas/model/_plot.py +124 -0
  310. scitex/canvas/model/_plot_types.py +682 -0
  311. scitex/canvas/model/_styles.py +246 -0
  312. scitex/canvas/utils/__init__.py +75 -0
  313. scitex/canvas/utils/_defaults.py +334 -0
  314. scitex/canvas/utils/_validate.py +198 -0
  315. scitex/capture/README.md +284 -0
  316. scitex/capture/TODO.md +40 -0
  317. scitex/capture/__init__.py +109 -0
  318. scitex/capture/__main__.py +24 -0
  319. scitex/capture/_mcp/__init__.py +11 -0
  320. scitex/capture/_mcp/handlers.py +438 -0
  321. scitex/capture/_mcp/tool_schemas.py +270 -0
  322. scitex/capture/capture.py +820 -0
  323. scitex/capture/cli.py +208 -0
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  2323. scitex/stats/_schema.py +50 -0
  2324. scitex/stats/auto/__init__.py +187 -0
  2325. scitex/stats/auto/_context.py +331 -0
  2326. scitex/stats/auto/_formatting.py +679 -0
  2327. scitex/stats/auto/_rules.py +901 -0
  2328. scitex/stats/auto/_selector.py +554 -0
  2329. scitex/stats/auto/_styles.py +721 -0
  2330. scitex/stats/correct/__init__.py +21 -0
  2331. scitex/stats/correct/_correct_bonferroni.py +560 -0
  2332. scitex/stats/correct/_correct_fdr.py +608 -0
  2333. scitex/stats/correct/_correct_fdr_.py +627 -0
  2334. scitex/stats/correct/_correct_holm.py +530 -0
  2335. scitex/stats/correct/_correct_sidak.py +514 -0
  2336. scitex/stats/descriptive/__init__.py +85 -0
  2337. scitex/stats/descriptive/_circular.py +400 -0
  2338. scitex/stats/descriptive/_describe.py +182 -0
  2339. scitex/stats/descriptive/_nan.py +288 -0
  2340. scitex/stats/descriptive/_real.py +176 -0
  2341. scitex/stats/effect_sizes/__init__.py +40 -0
  2342. scitex/stats/effect_sizes/_cliffs_delta.py +328 -0
  2343. scitex/stats/effect_sizes/_cohens_d.py +341 -0
  2344. scitex/stats/effect_sizes/_epsilon_squared.py +312 -0
  2345. scitex/stats/effect_sizes/_eta_squared.py +298 -0
  2346. scitex/stats/effect_sizes/_prob_superiority.py +293 -0
  2347. scitex/stats/io/__init__.py +28 -0
  2348. scitex/stats/io/_bundle.py +156 -0
  2349. scitex/stats/mcp_server.py +405 -0
  2350. scitex/stats/posthoc/__init__.py +19 -0
  2351. scitex/stats/posthoc/_dunnett.py +483 -0
  2352. scitex/stats/posthoc/_games_howell.py +401 -0
  2353. scitex/stats/posthoc/_tukey_hsd.py +375 -0
  2354. scitex/stats/power/__init__.py +19 -0
  2355. scitex/stats/power/_power.py +433 -0
  2356. scitex/stats/run_all.sh +46 -0
  2357. scitex/stats/tests/__init__.py +13 -0
  2358. scitex/stats/tests/correlation/__init__.py +13 -0
  2359. scitex/stats/tests/correlation/_test_pearson.py +252 -0
  2360. scitex/stats/utils/__init__.py +59 -0
  2361. scitex/stats/utils/_effect_size.py +992 -0
  2362. scitex/stats/utils/_formatters.py +276 -0
  2363. scitex/stats/utils/_normalizers.py +923 -0
  2364. scitex/stats/utils/_power.py +433 -0
  2365. scitex/str/__init__.py +112 -0
  2366. scitex/str/_clean_path.py +79 -0
  2367. scitex/str/_color_text.py +52 -0
  2368. scitex/str/_decapitalize.py +58 -0
  2369. scitex/str/_factor_out_digits.py +309 -0
  2370. scitex/str/_format_plot_text.py +567 -0
  2371. scitex/str/_grep.py +48 -0
  2372. scitex/str/_latex.py +97 -0
  2373. scitex/str/_latex_fallback.py +583 -0
  2374. scitex/str/_mask_api.py +39 -0
  2375. scitex/str/_mask_api_key.py +8 -0
  2376. scitex/str/_parse.py +163 -0
  2377. scitex/str/_print_block.py +47 -0
  2378. scitex/str/_print_debug.py +68 -0
  2379. scitex/str/_printc.py +62 -0
  2380. scitex/str/_readable_bytes.py +38 -0
  2381. scitex/str/_remove_ansi.py +23 -0
  2382. scitex/str/_replace.py +134 -0
  2383. scitex/str/_search.py +127 -0
  2384. scitex/str/_squeeze_space.py +36 -0
  2385. scitex/template/README.md +154 -0
  2386. scitex/template/__init__.py +115 -0
  2387. scitex/template/_clone_project.py +167 -0
  2388. scitex/template/_copy.py +105 -0
  2389. scitex/template/_customize.py +116 -0
  2390. scitex/template/_git_strategy.py +122 -0
  2391. scitex/template/_logging_helpers.py +122 -0
  2392. scitex/template/_mcp/__init__.py +4 -0
  2393. scitex/template/_mcp/handlers.py +259 -0
  2394. scitex/template/_mcp/tool_schemas.py +112 -0
  2395. scitex/template/_rename.py +65 -0
  2396. scitex/template/clone_pip_project.py +106 -0
  2397. scitex/template/clone_research.py +106 -0
  2398. scitex/template/clone_singularity.py +106 -0
  2399. scitex/template/clone_writer_directory.py +106 -0
  2400. scitex/template/mcp_server.py +186 -0
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  2402. scitex/tex/_export.py +890 -0
  2403. scitex/tex/_preview.py +118 -0
  2404. scitex/tex/_to_vec.py +119 -0
  2405. scitex/torch/__init__.py +28 -0
  2406. scitex/torch/_apply_to.py +34 -0
  2407. scitex/torch/_nan_funcs.py +77 -0
  2408. scitex/types/_ArrayLike.py +66 -0
  2409. scitex/types/_ColorLike.py +21 -0
  2410. scitex/types/__init__.py +14 -0
  2411. scitex/types/_is_listed_X.py +70 -0
  2412. scitex/ui/__init__.py +173 -0
  2413. scitex/ui/_backends/__init__.py +66 -0
  2414. scitex/ui/_backends/_audio.py +86 -0
  2415. scitex/ui/_backends/_config.py +250 -0
  2416. scitex/ui/_backends/_desktop.py +184 -0
  2417. scitex/ui/_backends/_emacs.py +210 -0
  2418. scitex/ui/_backends/_email.py +78 -0
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  2430. scitex/utils/_compress_hdf5.py +127 -0
  2431. scitex/utils/_email.py +221 -0
  2432. scitex/utils/_grid.py +150 -0
  2433. scitex/utils/_notify.py +267 -0
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  2440. scitex/web/_search_pubmed.py +501 -0
  2441. scitex/web/_summarize_url.py +158 -0
  2442. scitex/web/download_images.py +316 -0
  2443. scitex/writer/README.md +435 -0
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  2454. scitex/writer/_compile/revision.py +82 -0
  2455. scitex/writer/_compile/supplementary.py +100 -0
  2456. scitex/writer/_dataclasses/__init__.py +44 -0
  2457. scitex/writer/_dataclasses/config/_CONSTANTS.py +46 -0
  2458. scitex/writer/_dataclasses/config/_WriterConfig.py +175 -0
  2459. scitex/writer/_dataclasses/config/__init__.py +9 -0
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  2464. scitex/writer/_dataclasses/core/_Document.py +146 -0
  2465. scitex/writer/_dataclasses/core/_DocumentSection.py +546 -0
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  2478. scitex/writer/_dataclasses/tree/_SupplementaryTree.py +101 -0
  2479. scitex/writer/_dataclasses/tree/__init__.py +23 -0
  2480. scitex/writer/_mcp/__init__.py +4 -0
  2481. scitex/writer/_mcp/handlers.py +765 -0
  2482. scitex/writer/_mcp/tool_schemas.py +363 -0
  2483. scitex/writer/_project/__init__.py +29 -0
  2484. scitex/writer/_project/_create.py +89 -0
  2485. scitex/writer/_project/_trees.py +63 -0
  2486. scitex/writer/_project/_validate.py +61 -0
  2487. scitex/writer/utils/.legacy_git_retry.py +164 -0
  2488. scitex/writer/utils/__init__.py +24 -0
  2489. scitex/writer/utils/_converters.py +635 -0
  2490. scitex/writer/utils/_parse_latex_logs.py +138 -0
  2491. scitex/writer/utils/_parse_script_args.py +156 -0
  2492. scitex/writer/utils/_verify_tree_structure.py +205 -0
  2493. scitex/writer/utils/_watch.py +96 -0
  2494. scitex-2.14.0.dist-info/METADATA +1238 -0
  2495. scitex-2.14.0.dist-info/RECORD +2498 -0
  2496. scitex-2.14.0.dist-info/WHEEL +4 -0
  2497. scitex-2.14.0.dist-info/entry_points.txt +12 -0
  2498. scitex-2.14.0.dist-info/licenses/LICENSE +661 -0
@@ -0,0 +1,1976 @@
1
+ #!/usr/bin/env python3
2
+ # -*- coding: utf-8 -*-
3
+ # Timestamp: 2025-12-08
4
+ # File: ./src/scitex/vis/editor/_dearpygui_editor.py
5
+ """DearPyGui-based figure editor with GPU-accelerated rendering."""
6
+
7
+ from pathlib import Path
8
+ from typing import Dict, Any, Optional
9
+ import copy
10
+ import io
11
+ import base64
12
+
13
+
14
+ def _create_checkerboard(width: int, height: int, square_size: int = 10) -> "Image":
15
+ """Create a checkerboard pattern image for transparency preview.
16
+
17
+ Parameters
18
+ ----------
19
+ width : int
20
+ Image width in pixels
21
+ height : int
22
+ Image height in pixels
23
+ square_size : int
24
+ Size of each checkerboard square (default: 10)
25
+
26
+ Returns
27
+ -------
28
+ PIL.Image
29
+ RGBA image with checkerboard pattern (light/dark gray)
30
+ """
31
+ from PIL import Image
32
+ import numpy as np
33
+
34
+ # Create checkerboard pattern
35
+ light_gray = (220, 220, 220, 255)
36
+ dark_gray = (180, 180, 180, 255)
37
+
38
+ # Create array
39
+ img_array = np.zeros((height, width, 4), dtype=np.uint8)
40
+
41
+ for y in range(height):
42
+ for x in range(width):
43
+ # Determine which square we're in
44
+ square_x = x // square_size
45
+ square_y = y // square_size
46
+ if (square_x + square_y) % 2 == 0:
47
+ img_array[y, x] = light_gray
48
+ else:
49
+ img_array[y, x] = dark_gray
50
+
51
+ return Image.fromarray(img_array, "RGBA")
52
+
53
+
54
+ class DearPyGuiEditor:
55
+ """
56
+ GPU-accelerated figure editor using DearPyGui.
57
+
58
+ Features:
59
+ - Modern immediate-mode GUI with GPU acceleration
60
+ - Real-time figure preview
61
+ - Property editors with sliders, color pickers, and input fields
62
+ - Click-to-select traces on preview
63
+ - Save to .manual.json
64
+ - SciTeX style defaults pre-filled
65
+ - Dark/light theme support
66
+ """
67
+
68
+ def __init__(
69
+ self,
70
+ json_path: Path,
71
+ metadata: Dict[str, Any],
72
+ csv_data: Optional[Any] = None,
73
+ png_path: Optional[Path] = None,
74
+ manual_overrides: Optional[Dict[str, Any]] = None,
75
+ ):
76
+ self.json_path = Path(json_path)
77
+ self.metadata = metadata
78
+ self.csv_data = csv_data
79
+ self.png_path = Path(png_path) if png_path else None
80
+ self.manual_overrides = manual_overrides or {}
81
+
82
+ # Get SciTeX defaults and merge with metadata
83
+ from ._defaults import get_scitex_defaults, extract_defaults_from_metadata
84
+
85
+ self.scitex_defaults = get_scitex_defaults()
86
+ self.metadata_defaults = extract_defaults_from_metadata(metadata)
87
+
88
+ # Start with defaults, then overlay manual overrides
89
+ self.current_overrides = copy.deepcopy(self.scitex_defaults)
90
+ self.current_overrides.update(self.metadata_defaults)
91
+ self.current_overrides.update(self.manual_overrides)
92
+
93
+ # Track modifications
94
+ self._initial_overrides = copy.deepcopy(self.current_overrides)
95
+ self._user_modified = False
96
+ self._texture_id = None
97
+
98
+ # Click-to-select state
99
+ self._selected_element = None # {'type': 'trace'|'title'|'xlabel'|'ylabel'|'legend'|'xaxis'|'yaxis', 'index': int|None}
100
+ self._selected_trace_index = None # Legacy compat
101
+ self._preview_bounds = (
102
+ None # (x_offset, y_offset, width, height) of figure in preview
103
+ )
104
+ self._axes_transform = None # Transform info for data coordinates
105
+ self._element_bboxes = {} # Store bboxes for all selectable elements
106
+
107
+ # Hover state
108
+ self._hovered_element = None # Element currently being hovered
109
+ self._last_hover_check = 0 # For throttling hover updates
110
+ self._backend_name = "dearpygui" # Backend name for title
111
+
112
+ # Cached rendering for fast hover response
113
+ self._cached_base_image = None # PIL Image of base figure (no highlights)
114
+ self._cached_base_data = None # Flattened RGBA data for DearPyGui
115
+ self._cache_dirty = True # Flag to indicate cache needs rebuild
116
+
117
+ def run(self):
118
+ """Launch the DearPyGui editor."""
119
+ try:
120
+ import dearpygui.dearpygui as dpg
121
+ except ImportError:
122
+ raise ImportError(
123
+ "DearPyGui is required for this editor. "
124
+ "Install with: pip install dearpygui"
125
+ )
126
+
127
+ dpg.create_context()
128
+
129
+ # Configure viewport
130
+ dpg.create_viewport(
131
+ title=f"SciTeX Editor ({self._backend_name}) - {self.json_path.name}",
132
+ width=1400,
133
+ height=900,
134
+ )
135
+
136
+ # Create texture registry for image preview
137
+ with dpg.texture_registry(show=False):
138
+ # Create initial texture with placeholder
139
+ width, height = 800, 600
140
+ texture_data = [0.2, 0.2, 0.2, 1.0] * (width * height)
141
+ self._texture_id = dpg.add_dynamic_texture(
142
+ width=width,
143
+ height=height,
144
+ default_value=texture_data,
145
+ tag="preview_texture",
146
+ )
147
+
148
+ # Create main window
149
+ with dpg.window(label="SciTeX Figure Editor", tag="main_window"):
150
+ with dpg.group(horizontal=True):
151
+ # Left panel: Preview
152
+ self._create_preview_panel(dpg)
153
+
154
+ # Right panel: Controls
155
+ self._create_control_panel(dpg)
156
+
157
+ # Set main window as primary
158
+ dpg.set_primary_window("main_window", True)
159
+
160
+ # Initial render
161
+ self._update_preview(dpg)
162
+
163
+ # Setup and show
164
+ dpg.setup_dearpygui()
165
+ dpg.show_viewport()
166
+ dpg.start_dearpygui()
167
+ dpg.destroy_context()
168
+
169
+ def _create_preview_panel(self, dpg):
170
+ """Create the preview panel with figure image, click handler, and hover detection."""
171
+ with dpg.child_window(width=900, height=-1, tag="preview_panel"):
172
+ dpg.add_text(
173
+ "Figure Preview (click to select, hover to highlight)",
174
+ color=(100, 200, 100),
175
+ )
176
+ dpg.add_separator()
177
+
178
+ # Image display with click and move handlers
179
+ with dpg.handler_registry(tag="preview_handler"):
180
+ dpg.add_mouse_click_handler(callback=self._on_preview_click)
181
+ dpg.add_mouse_move_handler(callback=self._on_preview_hover)
182
+
183
+ dpg.add_image("preview_texture", tag="preview_image")
184
+
185
+ dpg.add_separator()
186
+ dpg.add_text("", tag="hover_text", color=(150, 200, 150))
187
+ dpg.add_text("", tag="status_text", color=(150, 150, 150))
188
+ dpg.add_text("", tag="selection_text", color=(200, 200, 100))
189
+
190
+ def _create_control_panel(self, dpg):
191
+ """Create the control panel with all editing options."""
192
+ with dpg.child_window(width=-1, height=-1, tag="control_panel"):
193
+ dpg.add_text("Properties", color=(100, 200, 100))
194
+ dpg.add_separator()
195
+
196
+ # Labels Section
197
+ with dpg.collapsing_header(label="Labels", default_open=True):
198
+ dpg.add_input_text(
199
+ label="Title",
200
+ default_value=self.current_overrides.get("title", ""),
201
+ tag="title_input",
202
+ callback=self._on_value_change,
203
+ on_enter=True,
204
+ width=250,
205
+ )
206
+ dpg.add_input_text(
207
+ label="X Label",
208
+ default_value=self.current_overrides.get("xlabel", ""),
209
+ tag="xlabel_input",
210
+ callback=self._on_value_change,
211
+ on_enter=True,
212
+ width=250,
213
+ )
214
+ dpg.add_input_text(
215
+ label="Y Label",
216
+ default_value=self.current_overrides.get("ylabel", ""),
217
+ tag="ylabel_input",
218
+ callback=self._on_value_change,
219
+ on_enter=True,
220
+ width=250,
221
+ )
222
+
223
+ # Axis Limits Section
224
+ with dpg.collapsing_header(label="Axis Limits", default_open=False):
225
+ with dpg.group(horizontal=True):
226
+ xlim = self.current_overrides.get("xlim", [0, 1])
227
+ dpg.add_input_float(
228
+ label="X Min",
229
+ default_value=xlim[0] if xlim else 0,
230
+ tag="xmin_input",
231
+ width=100,
232
+ )
233
+ dpg.add_input_float(
234
+ label="X Max",
235
+ default_value=xlim[1] if xlim else 1,
236
+ tag="xmax_input",
237
+ width=100,
238
+ )
239
+ with dpg.group(horizontal=True):
240
+ ylim = self.current_overrides.get("ylim", [0, 1])
241
+ dpg.add_input_float(
242
+ label="Y Min",
243
+ default_value=ylim[0] if ylim else 0,
244
+ tag="ymin_input",
245
+ width=100,
246
+ )
247
+ dpg.add_input_float(
248
+ label="Y Max",
249
+ default_value=ylim[1] if ylim else 1,
250
+ tag="ymax_input",
251
+ width=100,
252
+ )
253
+ dpg.add_button(
254
+ label="Apply Limits",
255
+ callback=self._apply_limits,
256
+ width=150,
257
+ )
258
+
259
+ # Line Style Section
260
+ with dpg.collapsing_header(label="Line Style", default_open=True):
261
+ dpg.add_slider_float(
262
+ label="Line Width (pt)",
263
+ default_value=self.current_overrides.get("linewidth", 1.0),
264
+ min_value=0.1,
265
+ max_value=5.0,
266
+ tag="linewidth_slider",
267
+ callback=self._on_value_change,
268
+ width=200,
269
+ )
270
+
271
+ # Font Settings Section
272
+ with dpg.collapsing_header(label="Font Settings", default_open=False):
273
+ dpg.add_slider_int(
274
+ label="Title Font Size",
275
+ default_value=self.current_overrides.get("title_fontsize", 8),
276
+ min_value=6,
277
+ max_value=20,
278
+ tag="title_fontsize_slider",
279
+ callback=self._on_value_change,
280
+ width=200,
281
+ )
282
+ dpg.add_slider_int(
283
+ label="Axis Font Size",
284
+ default_value=self.current_overrides.get("axis_fontsize", 7),
285
+ min_value=6,
286
+ max_value=16,
287
+ tag="axis_fontsize_slider",
288
+ callback=self._on_value_change,
289
+ width=200,
290
+ )
291
+ dpg.add_slider_int(
292
+ label="Tick Font Size",
293
+ default_value=self.current_overrides.get("tick_fontsize", 7),
294
+ min_value=6,
295
+ max_value=16,
296
+ tag="tick_fontsize_slider",
297
+ callback=self._on_value_change,
298
+ width=200,
299
+ )
300
+ dpg.add_slider_int(
301
+ label="Legend Font Size",
302
+ default_value=self.current_overrides.get("legend_fontsize", 6),
303
+ min_value=4,
304
+ max_value=14,
305
+ tag="legend_fontsize_slider",
306
+ callback=self._on_value_change,
307
+ width=200,
308
+ )
309
+
310
+ # Tick Settings Section
311
+ with dpg.collapsing_header(label="Tick Settings", default_open=False):
312
+ dpg.add_slider_int(
313
+ label="N Ticks",
314
+ default_value=self.current_overrides.get("n_ticks", 4),
315
+ min_value=2,
316
+ max_value=10,
317
+ tag="n_ticks_slider",
318
+ callback=self._on_value_change,
319
+ width=200,
320
+ )
321
+ dpg.add_slider_float(
322
+ label="Tick Length (mm)",
323
+ default_value=self.current_overrides.get("tick_length", 0.8),
324
+ min_value=0.2,
325
+ max_value=3.0,
326
+ tag="tick_length_slider",
327
+ callback=self._on_value_change,
328
+ width=200,
329
+ )
330
+ dpg.add_slider_float(
331
+ label="Tick Width (mm)",
332
+ default_value=self.current_overrides.get("tick_width", 0.2),
333
+ min_value=0.05,
334
+ max_value=1.0,
335
+ tag="tick_width_slider",
336
+ callback=self._on_value_change,
337
+ width=200,
338
+ )
339
+ dpg.add_combo(
340
+ label="Tick Direction",
341
+ items=["out", "in", "inout"],
342
+ default_value=self.current_overrides.get("tick_direction", "out"),
343
+ tag="tick_direction_combo",
344
+ callback=self._on_value_change,
345
+ width=150,
346
+ )
347
+
348
+ # Style Section
349
+ with dpg.collapsing_header(label="Style", default_open=True):
350
+ dpg.add_checkbox(
351
+ label="Show Grid",
352
+ default_value=self.current_overrides.get("grid", False),
353
+ tag="grid_checkbox",
354
+ callback=self._on_value_change,
355
+ )
356
+ dpg.add_checkbox(
357
+ label="Hide Top Spine",
358
+ default_value=self.current_overrides.get("hide_top_spine", True),
359
+ tag="hide_top_spine_checkbox",
360
+ callback=self._on_value_change,
361
+ )
362
+ dpg.add_checkbox(
363
+ label="Hide Right Spine",
364
+ default_value=self.current_overrides.get("hide_right_spine", True),
365
+ tag="hide_right_spine_checkbox",
366
+ callback=self._on_value_change,
367
+ )
368
+ dpg.add_checkbox(
369
+ label="Transparent Background",
370
+ default_value=self.current_overrides.get("transparent", True),
371
+ tag="transparent_checkbox",
372
+ callback=self._on_value_change,
373
+ )
374
+ dpg.add_slider_float(
375
+ label="Axis Width (mm)",
376
+ default_value=self.current_overrides.get("axis_width", 0.2),
377
+ min_value=0.05,
378
+ max_value=1.0,
379
+ tag="axis_width_slider",
380
+ callback=self._on_value_change,
381
+ width=200,
382
+ )
383
+
384
+ # Legend Section
385
+ with dpg.collapsing_header(label="Legend", default_open=False):
386
+ dpg.add_checkbox(
387
+ label="Show Legend",
388
+ default_value=self.current_overrides.get("legend_visible", True),
389
+ tag="legend_visible_checkbox",
390
+ callback=self._on_value_change,
391
+ )
392
+ dpg.add_checkbox(
393
+ label="Show Frame",
394
+ default_value=self.current_overrides.get("legend_frameon", False),
395
+ tag="legend_frameon_checkbox",
396
+ callback=self._on_value_change,
397
+ )
398
+ dpg.add_combo(
399
+ label="Position",
400
+ items=[
401
+ "best",
402
+ "upper right",
403
+ "upper left",
404
+ "lower right",
405
+ "lower left",
406
+ "center right",
407
+ "center left",
408
+ "upper center",
409
+ "lower center",
410
+ "center",
411
+ ],
412
+ default_value=self.current_overrides.get("legend_loc", "best"),
413
+ tag="legend_loc_combo",
414
+ callback=self._on_value_change,
415
+ width=150,
416
+ )
417
+
418
+ # Selected Element Section (click on preview to select)
419
+ with dpg.collapsing_header(
420
+ label="Selected Element",
421
+ default_open=True,
422
+ tag="selected_element_header",
423
+ ):
424
+ dpg.add_text(
425
+ "Click on preview to select elements",
426
+ tag="element_hint_text",
427
+ color=(150, 150, 150),
428
+ )
429
+ dpg.add_combo(
430
+ label="Element",
431
+ items=self._get_all_element_labels(),
432
+ tag="element_selector_combo",
433
+ callback=self._on_element_selected,
434
+ width=200,
435
+ )
436
+ dpg.add_separator()
437
+
438
+ # Trace-specific controls (shown when trace selected)
439
+ with dpg.group(tag="trace_controls_group", show=False):
440
+ dpg.add_input_text(
441
+ label="Label",
442
+ tag="trace_label_input",
443
+ callback=self._on_trace_property_change,
444
+ on_enter=True,
445
+ width=200,
446
+ )
447
+ dpg.add_color_edit(
448
+ label="Color",
449
+ tag="trace_color_picker",
450
+ callback=self._on_trace_property_change,
451
+ no_alpha=True,
452
+ width=200,
453
+ )
454
+ dpg.add_slider_float(
455
+ label="Line Width",
456
+ tag="trace_linewidth_slider",
457
+ default_value=1.0,
458
+ min_value=0.1,
459
+ max_value=5.0,
460
+ callback=self._on_trace_property_change,
461
+ width=200,
462
+ )
463
+ dpg.add_combo(
464
+ label="Line Style",
465
+ items=["-", "--", "-.", ":", ""],
466
+ default_value="-",
467
+ tag="trace_linestyle_combo",
468
+ callback=self._on_trace_property_change,
469
+ width=100,
470
+ )
471
+ dpg.add_combo(
472
+ label="Marker",
473
+ items=["", "o", "s", "^", "v", "D", "x", "+", "*"],
474
+ default_value="",
475
+ tag="trace_marker_combo",
476
+ callback=self._on_trace_property_change,
477
+ width=100,
478
+ )
479
+ dpg.add_slider_float(
480
+ label="Marker Size",
481
+ tag="trace_markersize_slider",
482
+ default_value=6.0,
483
+ min_value=1.0,
484
+ max_value=20.0,
485
+ callback=self._on_trace_property_change,
486
+ width=200,
487
+ )
488
+
489
+ # Text element controls (title, xlabel, ylabel)
490
+ with dpg.group(tag="text_controls_group", show=False):
491
+ dpg.add_input_text(
492
+ label="Text",
493
+ tag="element_text_input",
494
+ callback=self._on_text_element_change,
495
+ on_enter=True,
496
+ width=200,
497
+ )
498
+ dpg.add_slider_int(
499
+ label="Font Size",
500
+ tag="element_fontsize_slider",
501
+ default_value=8,
502
+ min_value=4,
503
+ max_value=24,
504
+ callback=self._on_text_element_change,
505
+ width=200,
506
+ )
507
+ dpg.add_color_edit(
508
+ label="Color",
509
+ tag="element_text_color",
510
+ callback=self._on_text_element_change,
511
+ no_alpha=True,
512
+ default_value=[0, 0, 0],
513
+ width=200,
514
+ )
515
+
516
+ # Axis element controls (xaxis, yaxis)
517
+ with dpg.group(tag="axis_controls_group", show=False):
518
+ dpg.add_slider_float(
519
+ label="Line Width (mm)",
520
+ tag="axis_linewidth_slider",
521
+ default_value=0.2,
522
+ min_value=0.05,
523
+ max_value=1.0,
524
+ callback=self._on_axis_element_change,
525
+ width=200,
526
+ )
527
+ dpg.add_slider_float(
528
+ label="Tick Length (mm)",
529
+ tag="axis_tick_length_slider",
530
+ default_value=0.8,
531
+ min_value=0.2,
532
+ max_value=3.0,
533
+ callback=self._on_axis_element_change,
534
+ width=200,
535
+ )
536
+ dpg.add_slider_int(
537
+ label="Tick Font Size",
538
+ tag="axis_tick_fontsize_slider",
539
+ default_value=7,
540
+ min_value=4,
541
+ max_value=16,
542
+ callback=self._on_axis_element_change,
543
+ width=200,
544
+ )
545
+ dpg.add_checkbox(
546
+ label="Show Spine",
547
+ tag="axis_show_spine_checkbox",
548
+ default_value=True,
549
+ callback=self._on_axis_element_change,
550
+ )
551
+
552
+ # Legend controls
553
+ with dpg.group(tag="legend_controls_group", show=False):
554
+ dpg.add_checkbox(
555
+ label="Visible",
556
+ tag="legend_visible_edit",
557
+ default_value=True,
558
+ callback=self._on_legend_element_change,
559
+ )
560
+ dpg.add_checkbox(
561
+ label="Show Frame",
562
+ tag="legend_frameon_edit",
563
+ default_value=False,
564
+ callback=self._on_legend_element_change,
565
+ )
566
+ dpg.add_combo(
567
+ label="Position",
568
+ items=[
569
+ "best",
570
+ "upper right",
571
+ "upper left",
572
+ "lower right",
573
+ "lower left",
574
+ "center right",
575
+ "center left",
576
+ "upper center",
577
+ "lower center",
578
+ "center",
579
+ ],
580
+ default_value="best",
581
+ tag="legend_loc_edit",
582
+ callback=self._on_legend_element_change,
583
+ width=150,
584
+ )
585
+ dpg.add_slider_int(
586
+ label="Font Size",
587
+ tag="legend_fontsize_edit",
588
+ default_value=6,
589
+ min_value=4,
590
+ max_value=14,
591
+ callback=self._on_legend_element_change,
592
+ width=200,
593
+ )
594
+
595
+ dpg.add_button(
596
+ label="Deselect",
597
+ callback=self._deselect_element,
598
+ width=100,
599
+ )
600
+
601
+ # Dimensions Section
602
+ with dpg.collapsing_header(label="Dimensions", default_open=False):
603
+ fig_size = self.current_overrides.get("fig_size", [3.15, 2.68])
604
+ with dpg.group(horizontal=True):
605
+ dpg.add_input_float(
606
+ label="Width (in)",
607
+ default_value=fig_size[0],
608
+ tag="fig_width_input",
609
+ width=100,
610
+ )
611
+ dpg.add_input_float(
612
+ label="Height (in)",
613
+ default_value=fig_size[1],
614
+ tag="fig_height_input",
615
+ width=100,
616
+ )
617
+ dpg.add_slider_int(
618
+ label="DPI",
619
+ default_value=self.current_overrides.get("dpi", 300),
620
+ min_value=72,
621
+ max_value=600,
622
+ tag="dpi_slider",
623
+ callback=self._on_value_change,
624
+ width=200,
625
+ )
626
+
627
+ # Annotations Section
628
+ with dpg.collapsing_header(label="Annotations", default_open=False):
629
+ dpg.add_input_text(
630
+ label="Text",
631
+ tag="annot_text_input",
632
+ width=200,
633
+ )
634
+ with dpg.group(horizontal=True):
635
+ dpg.add_input_float(
636
+ label="X",
637
+ default_value=0.5,
638
+ tag="annot_x_input",
639
+ width=80,
640
+ )
641
+ dpg.add_input_float(
642
+ label="Y",
643
+ default_value=0.5,
644
+ tag="annot_y_input",
645
+ width=80,
646
+ )
647
+ dpg.add_button(
648
+ label="Add Annotation",
649
+ callback=self._add_annotation,
650
+ width=150,
651
+ )
652
+ dpg.add_listbox(
653
+ label="",
654
+ items=[],
655
+ tag="annotations_listbox",
656
+ num_items=4,
657
+ width=250,
658
+ )
659
+ dpg.add_button(
660
+ label="Remove Selected",
661
+ callback=self._remove_annotation,
662
+ width=150,
663
+ )
664
+
665
+ dpg.add_separator()
666
+
667
+ # Action buttons
668
+ dpg.add_button(
669
+ label="Update Preview",
670
+ callback=lambda: self._update_preview(dpg),
671
+ width=-1,
672
+ )
673
+ dpg.add_button(
674
+ label="Save to .manual.json",
675
+ callback=self._save_manual,
676
+ width=-1,
677
+ )
678
+ dpg.add_button(
679
+ label="Reset to Original",
680
+ callback=self._reset_overrides,
681
+ width=-1,
682
+ )
683
+ dpg.add_button(
684
+ label="Export PNG",
685
+ callback=self._export_png,
686
+ width=-1,
687
+ )
688
+
689
+ def _on_value_change(self, sender, app_data, user_data=None):
690
+ """Handle value changes from widgets."""
691
+ import dearpygui.dearpygui as dpg
692
+
693
+ self._user_modified = True
694
+ self._collect_overrides(dpg)
695
+ self._update_preview(dpg)
696
+
697
+ def _collect_overrides(self, dpg):
698
+ """Collect current values from all widgets."""
699
+ # Labels
700
+ self.current_overrides["title"] = dpg.get_value("title_input")
701
+ self.current_overrides["xlabel"] = dpg.get_value("xlabel_input")
702
+ self.current_overrides["ylabel"] = dpg.get_value("ylabel_input")
703
+
704
+ # Line style
705
+ self.current_overrides["linewidth"] = dpg.get_value("linewidth_slider")
706
+
707
+ # Font settings
708
+ self.current_overrides["title_fontsize"] = dpg.get_value(
709
+ "title_fontsize_slider"
710
+ )
711
+ self.current_overrides["axis_fontsize"] = dpg.get_value("axis_fontsize_slider")
712
+ self.current_overrides["tick_fontsize"] = dpg.get_value("tick_fontsize_slider")
713
+ self.current_overrides["legend_fontsize"] = dpg.get_value(
714
+ "legend_fontsize_slider"
715
+ )
716
+
717
+ # Tick settings
718
+ self.current_overrides["n_ticks"] = dpg.get_value("n_ticks_slider")
719
+ self.current_overrides["tick_length"] = dpg.get_value("tick_length_slider")
720
+ self.current_overrides["tick_width"] = dpg.get_value("tick_width_slider")
721
+ self.current_overrides["tick_direction"] = dpg.get_value("tick_direction_combo")
722
+
723
+ # Style
724
+ self.current_overrides["grid"] = dpg.get_value("grid_checkbox")
725
+ self.current_overrides["hide_top_spine"] = dpg.get_value(
726
+ "hide_top_spine_checkbox"
727
+ )
728
+ self.current_overrides["hide_right_spine"] = dpg.get_value(
729
+ "hide_right_spine_checkbox"
730
+ )
731
+ self.current_overrides["transparent"] = dpg.get_value("transparent_checkbox")
732
+ self.current_overrides["axis_width"] = dpg.get_value("axis_width_slider")
733
+
734
+ # Legend
735
+ self.current_overrides["legend_visible"] = dpg.get_value(
736
+ "legend_visible_checkbox"
737
+ )
738
+ self.current_overrides["legend_frameon"] = dpg.get_value(
739
+ "legend_frameon_checkbox"
740
+ )
741
+ self.current_overrides["legend_loc"] = dpg.get_value("legend_loc_combo")
742
+
743
+ # Dimensions
744
+ self.current_overrides["fig_size"] = [
745
+ dpg.get_value("fig_width_input"),
746
+ dpg.get_value("fig_height_input"),
747
+ ]
748
+ self.current_overrides["dpi"] = dpg.get_value("dpi_slider")
749
+
750
+ def _apply_limits(self, sender=None, app_data=None, user_data=None):
751
+ """Apply axis limits."""
752
+ import dearpygui.dearpygui as dpg
753
+
754
+ xmin = dpg.get_value("xmin_input")
755
+ xmax = dpg.get_value("xmax_input")
756
+ ymin = dpg.get_value("ymin_input")
757
+ ymax = dpg.get_value("ymax_input")
758
+
759
+ if xmin < xmax:
760
+ self.current_overrides["xlim"] = [xmin, xmax]
761
+ if ymin < ymax:
762
+ self.current_overrides["ylim"] = [ymin, ymax]
763
+
764
+ self._user_modified = True
765
+ self._update_preview(dpg)
766
+
767
+ def _add_annotation(self, sender=None, app_data=None, user_data=None):
768
+ """Add text annotation."""
769
+ import dearpygui.dearpygui as dpg
770
+
771
+ text = dpg.get_value("annot_text_input")
772
+ if not text:
773
+ return
774
+
775
+ x = dpg.get_value("annot_x_input")
776
+ y = dpg.get_value("annot_y_input")
777
+
778
+ if "annotations" not in self.current_overrides:
779
+ self.current_overrides["annotations"] = []
780
+
781
+ self.current_overrides["annotations"].append(
782
+ {
783
+ "type": "text",
784
+ "text": text,
785
+ "x": x,
786
+ "y": y,
787
+ "fontsize": self.current_overrides.get("axis_fontsize", 7),
788
+ }
789
+ )
790
+
791
+ dpg.set_value("annot_text_input", "")
792
+ self._update_annotations_list(dpg)
793
+ self._user_modified = True
794
+ self._update_preview(dpg)
795
+
796
+ def _remove_annotation(self, sender=None, app_data=None, user_data=None):
797
+ """Remove selected annotation."""
798
+ import dearpygui.dearpygui as dpg
799
+
800
+ selected = dpg.get_value("annotations_listbox")
801
+ annotations = self.current_overrides.get("annotations", [])
802
+
803
+ if selected and annotations:
804
+ # Find index by text
805
+ for i, ann in enumerate(annotations):
806
+ label = f"{ann.get('text', '')[:20]} ({ann.get('x', 0):.2f}, {ann.get('y', 0):.2f})"
807
+ if label == selected:
808
+ del annotations[i]
809
+ break
810
+
811
+ self._update_annotations_list(dpg)
812
+ self._user_modified = True
813
+ self._update_preview(dpg)
814
+
815
+ def _update_annotations_list(self, dpg):
816
+ """Update the annotations listbox."""
817
+ annotations = self.current_overrides.get("annotations", [])
818
+ items = []
819
+ for ann in annotations:
820
+ if ann.get("type") == "text":
821
+ label = f"{ann.get('text', '')[:20]} ({ann.get('x', 0):.2f}, {ann.get('y', 0):.2f})"
822
+ items.append(label)
823
+
824
+ dpg.configure_item("annotations_listbox", items=items)
825
+
826
+ def _update_preview(self, dpg):
827
+ """Update the figure preview (full re-render)."""
828
+ try:
829
+ # Mark cache dirty and do full render
830
+ self._cache_dirty = True
831
+ img_data, width, height = self._render_figure()
832
+
833
+ # Update texture
834
+ dpg.set_value("preview_texture", img_data)
835
+
836
+ # Update status
837
+ dpg.set_value("status_text", f"Preview updated ({width}x{height})")
838
+
839
+ except Exception as e:
840
+ dpg.set_value("status_text", f"Error: {str(e)}")
841
+
842
+ def _update_hover_overlay(self, dpg):
843
+ """Fast hover overlay update using cached base image (no matplotlib re-render)."""
844
+ import numpy as np
845
+ from PIL import Image, ImageDraw
846
+
847
+ # If no cached base, do full render
848
+ if self._cached_base_image is None:
849
+ self._update_preview(dpg)
850
+ return
851
+
852
+ try:
853
+ # Start with a copy of cached base
854
+ img = self._cached_base_image.copy()
855
+ draw = ImageDraw.Draw(img, "RGBA")
856
+
857
+ # Get hover element type
858
+ hovered_type = (
859
+ self._hovered_element.get("type") if self._hovered_element else None
860
+ )
861
+ selected_type = (
862
+ self._selected_element.get("type") if self._selected_element else None
863
+ )
864
+
865
+ # Draw hover highlight (outline only, no fill) for non-trace elements
866
+ if (
867
+ hovered_type
868
+ and hovered_type != "trace"
869
+ and hovered_type != selected_type
870
+ ):
871
+ bbox = self._element_bboxes.get(hovered_type)
872
+ if bbox:
873
+ x0, y0, x1, y1 = bbox
874
+ # Transparent outline only - no fill to avoid covering content
875
+ draw.rectangle(
876
+ [x0 - 2, y0 - 2, x1 + 2, y1 + 2],
877
+ fill=None,
878
+ outline=(100, 180, 255, 100),
879
+ width=1,
880
+ )
881
+
882
+ # Draw selection highlight (outline only, no fill) for non-trace elements
883
+ if selected_type and selected_type != "trace":
884
+ bbox = self._element_bboxes.get(selected_type)
885
+ if bbox:
886
+ x0, y0, x1, y1 = bbox
887
+ # Transparent outline only - no fill to avoid covering content
888
+ draw.rectangle(
889
+ [x0 - 2, y0 - 2, x1 + 2, y1 + 2],
890
+ fill=None,
891
+ outline=(255, 200, 80, 150),
892
+ width=2,
893
+ )
894
+
895
+ # Convert to DearPyGui texture format
896
+ img_array = np.array(img).astype(np.float32) / 255.0
897
+ img_data = img_array.flatten().tolist()
898
+
899
+ # Update texture
900
+ dpg.set_value("preview_texture", img_data)
901
+
902
+ except Exception as e:
903
+ # Fallback to full render on error
904
+ self._update_preview(dpg)
905
+
906
+ def _render_figure(self):
907
+ """Render figure and return as RGBA data for texture."""
908
+ import matplotlib
909
+
910
+ matplotlib.use("Agg")
911
+ import matplotlib.pyplot as plt
912
+ from matplotlib.ticker import MaxNLocator
913
+ import numpy as np
914
+ from PIL import Image
915
+ import dearpygui.dearpygui as dpg
916
+
917
+ # mm to pt conversion
918
+ mm_to_pt = 2.83465
919
+
920
+ o = self.current_overrides
921
+
922
+ # Dimensions - use fixed size for preview
923
+ preview_dpi = 100
924
+ fig_size = o.get("fig_size", [3.15, 2.68])
925
+
926
+ # Create figure with white background for preview
927
+ fig, ax = plt.subplots(figsize=fig_size, dpi=preview_dpi)
928
+
929
+ # For preview, use white background (transparent doesn't show well in GUI)
930
+ fig.patch.set_facecolor("white")
931
+ ax.patch.set_facecolor("white")
932
+
933
+ # Plot from CSV data (only pass selection, hover is via PIL overlay for speed)
934
+ if self.csv_data is not None:
935
+ self._plot_from_csv(ax, o, highlight_trace=self._selected_trace_index)
936
+ else:
937
+ ax.text(
938
+ 0.5,
939
+ 0.5,
940
+ "No plot data available\n(CSV not found)",
941
+ ha="center",
942
+ va="center",
943
+ transform=ax.transAxes,
944
+ fontsize=o.get("axis_fontsize", 7),
945
+ )
946
+
947
+ # Apply labels
948
+ if o.get("title"):
949
+ ax.set_title(o["title"], fontsize=o.get("title_fontsize", 8))
950
+ if o.get("xlabel"):
951
+ ax.set_xlabel(o["xlabel"], fontsize=o.get("axis_fontsize", 7))
952
+ if o.get("ylabel"):
953
+ ax.set_ylabel(o["ylabel"], fontsize=o.get("axis_fontsize", 7))
954
+
955
+ # Tick styling
956
+ ax.tick_params(
957
+ axis="both",
958
+ labelsize=o.get("tick_fontsize", 7),
959
+ length=o.get("tick_length", 0.8) * mm_to_pt,
960
+ width=o.get("tick_width", 0.2) * mm_to_pt,
961
+ direction=o.get("tick_direction", "out"),
962
+ )
963
+
964
+ # Number of ticks
965
+ ax.xaxis.set_major_locator(MaxNLocator(nbins=o.get("n_ticks", 4)))
966
+ ax.yaxis.set_major_locator(MaxNLocator(nbins=o.get("n_ticks", 4)))
967
+
968
+ # Grid
969
+ if o.get("grid"):
970
+ ax.grid(True, linewidth=o.get("axis_width", 0.2) * mm_to_pt, alpha=0.3)
971
+
972
+ # Axis limits
973
+ if o.get("xlim"):
974
+ ax.set_xlim(o["xlim"])
975
+ if o.get("ylim"):
976
+ ax.set_ylim(o["ylim"])
977
+
978
+ # Spines
979
+ if o.get("hide_top_spine", True):
980
+ ax.spines["top"].set_visible(False)
981
+ if o.get("hide_right_spine", True):
982
+ ax.spines["right"].set_visible(False)
983
+
984
+ for spine in ax.spines.values():
985
+ spine.set_linewidth(o.get("axis_width", 0.2) * mm_to_pt)
986
+
987
+ # Annotations
988
+ for annot in o.get("annotations", []):
989
+ if annot.get("type") == "text":
990
+ ax.text(
991
+ annot.get("x", 0.5),
992
+ annot.get("y", 0.5),
993
+ annot.get("text", ""),
994
+ transform=ax.transAxes,
995
+ fontsize=annot.get("fontsize", o.get("axis_fontsize", 7)),
996
+ )
997
+
998
+ fig.tight_layout()
999
+
1000
+ # Draw before collecting bboxes so we have accurate positions
1001
+ fig.canvas.draw()
1002
+
1003
+ # Draw hover/selection highlights for non-trace elements
1004
+ self._draw_element_highlights(fig, ax)
1005
+
1006
+ # Store axes transform info for click-to-select
1007
+ fig.canvas.draw()
1008
+ ax_bbox = ax.get_position()
1009
+ fig_width_px = int(fig_size[0] * preview_dpi)
1010
+ fig_height_px = int(fig_size[1] * preview_dpi)
1011
+
1012
+ # Collect element bboxes for click detection (in figure pixel coordinates)
1013
+ # We'll scale these later after resize
1014
+ self._element_bboxes_raw = {}
1015
+
1016
+ # Title bbox
1017
+ if ax.title.get_text():
1018
+ try:
1019
+ title_bbox = ax.title.get_window_extent(fig.canvas.get_renderer())
1020
+ self._element_bboxes_raw["title"] = (
1021
+ title_bbox.x0,
1022
+ title_bbox.y0,
1023
+ title_bbox.x1,
1024
+ title_bbox.y1,
1025
+ )
1026
+ except Exception:
1027
+ pass
1028
+
1029
+ # X label bbox
1030
+ if ax.xaxis.label.get_text():
1031
+ try:
1032
+ xlabel_bbox = ax.xaxis.label.get_window_extent(
1033
+ fig.canvas.get_renderer()
1034
+ )
1035
+ self._element_bboxes_raw["xlabel"] = (
1036
+ xlabel_bbox.x0,
1037
+ xlabel_bbox.y0,
1038
+ xlabel_bbox.x1,
1039
+ xlabel_bbox.y1,
1040
+ )
1041
+ except Exception:
1042
+ pass
1043
+
1044
+ # Y label bbox
1045
+ if ax.yaxis.label.get_text():
1046
+ try:
1047
+ ylabel_bbox = ax.yaxis.label.get_window_extent(
1048
+ fig.canvas.get_renderer()
1049
+ )
1050
+ self._element_bboxes_raw["ylabel"] = (
1051
+ ylabel_bbox.x0,
1052
+ ylabel_bbox.y0,
1053
+ ylabel_bbox.x1,
1054
+ ylabel_bbox.y1,
1055
+ )
1056
+ except Exception:
1057
+ pass
1058
+
1059
+ # Legend bbox
1060
+ legend = ax.get_legend()
1061
+ if legend:
1062
+ try:
1063
+ legend_bbox = legend.get_window_extent(fig.canvas.get_renderer())
1064
+ self._element_bboxes_raw["legend"] = (
1065
+ legend_bbox.x0,
1066
+ legend_bbox.y0,
1067
+ legend_bbox.x1,
1068
+ legend_bbox.y1,
1069
+ )
1070
+ except Exception:
1071
+ pass
1072
+
1073
+ # X axis (bottom spine area)
1074
+ try:
1075
+ xaxis_bbox = ax.spines["bottom"].get_window_extent(
1076
+ fig.canvas.get_renderer()
1077
+ )
1078
+ # Expand bbox slightly for easier clicking
1079
+ self._element_bboxes_raw["xaxis"] = (
1080
+ xaxis_bbox.x0,
1081
+ xaxis_bbox.y0 - 20,
1082
+ xaxis_bbox.x1,
1083
+ xaxis_bbox.y1 + 10,
1084
+ )
1085
+ except Exception:
1086
+ pass
1087
+
1088
+ # Y axis (left spine area)
1089
+ try:
1090
+ yaxis_bbox = ax.spines["left"].get_window_extent(fig.canvas.get_renderer())
1091
+ # Expand bbox slightly for easier clicking
1092
+ self._element_bboxes_raw["yaxis"] = (
1093
+ yaxis_bbox.x0 - 20,
1094
+ yaxis_bbox.y0,
1095
+ yaxis_bbox.x1 + 10,
1096
+ yaxis_bbox.y1,
1097
+ )
1098
+ except Exception:
1099
+ pass
1100
+
1101
+ # Convert to RGBA data for DearPyGui texture
1102
+ buf = io.BytesIO()
1103
+ fig.savefig(
1104
+ buf,
1105
+ format="png",
1106
+ dpi=preview_dpi,
1107
+ bbox_inches="tight",
1108
+ facecolor="white",
1109
+ edgecolor="none",
1110
+ )
1111
+ buf.seek(0)
1112
+
1113
+ # Load with PIL and convert to normalized RGBA
1114
+ img = Image.open(buf).convert("RGBA")
1115
+ width, height = img.size
1116
+
1117
+ # Resize to fit within max preview size while preserving aspect ratio
1118
+ max_width, max_height = 800, 600
1119
+ ratio = min(max_width / width, max_height / height)
1120
+ new_width = int(width * ratio)
1121
+ new_height = int(height * ratio)
1122
+ img = img.resize((new_width, new_height), Image.LANCZOS)
1123
+
1124
+ # Store preview bounds for coordinate conversion (after resize)
1125
+ x_offset = (max_width - new_width) // 2
1126
+ y_offset = (max_height - new_height) // 2
1127
+ self._preview_bounds = (x_offset, y_offset, new_width, new_height)
1128
+
1129
+ # Scale element bboxes to preview coordinates
1130
+ # Note: matplotlib uses bottom-left origin, we need top-left for preview
1131
+ self._element_bboxes = {}
1132
+ for elem_type, raw_bbox in getattr(self, "_element_bboxes_raw", {}).items():
1133
+ if raw_bbox is None:
1134
+ continue
1135
+ rx0, ry0, rx1, ry1 = raw_bbox
1136
+ # Scale to resized image
1137
+ sx0 = int(rx0 * ratio) + x_offset
1138
+ sx1 = int(rx1 * ratio) + x_offset
1139
+ # Flip Y coordinate (matplotlib origin is bottom, preview is top)
1140
+ sy0 = new_height - int(ry1 * ratio) + y_offset
1141
+ sy1 = new_height - int(ry0 * ratio) + y_offset
1142
+ self._element_bboxes[elem_type] = (sx0, sy0, sx1, sy1)
1143
+
1144
+ # Store axes transform info (scaled to resized image)
1145
+ # ax_bbox is in figure fraction coordinates
1146
+ ax_x0 = int(ax_bbox.x0 * new_width)
1147
+ ax_y0 = int((1 - ax_bbox.y1) * new_height) # Flip y (0 at top)
1148
+ ax_width = int(ax_bbox.width * new_width)
1149
+ ax_height = int(ax_bbox.height * new_height)
1150
+ xlim = ax.get_xlim()
1151
+ ylim = ax.get_ylim()
1152
+ self._axes_transform = (ax_x0, ax_y0, ax_width, ax_height, xlim, ylim)
1153
+
1154
+ # Create background - checkerboard for transparent, white otherwise
1155
+ transparent = o.get("transparent", True)
1156
+ if transparent:
1157
+ # Create checkerboard pattern for transparency preview
1158
+ padded = _create_checkerboard(max_width, max_height, square_size=10)
1159
+ else:
1160
+ padded = Image.new("RGBA", (max_width, max_height), (255, 255, 255, 255))
1161
+
1162
+ # Paste figure centered on background
1163
+ padded.paste(img, (x_offset, y_offset), img) # Use img as mask for alpha
1164
+ img = padded
1165
+ width, height = max_width, max_height
1166
+
1167
+ # Cache the base image (without highlights) for fast hover updates
1168
+ self._cached_base_image = img.copy()
1169
+ self._cache_dirty = False
1170
+
1171
+ # Convert to normalized float array for DearPyGui
1172
+ img_array = np.array(img).astype(np.float32) / 255.0
1173
+ img_data = img_array.flatten().tolist()
1174
+
1175
+ plt.close(fig)
1176
+
1177
+ # Update texture data (don't recreate texture, just update values)
1178
+ dpg.set_value("preview_texture", img_data)
1179
+
1180
+ return img_data, width, height
1181
+
1182
+ def _draw_element_highlights(self, fig, ax):
1183
+ """Draw selection highlights for non-trace elements (hover handled via PIL overlay)."""
1184
+ from matplotlib.patches import FancyBboxPatch
1185
+ import matplotlib.transforms as transforms
1186
+
1187
+ renderer = fig.canvas.get_renderer()
1188
+
1189
+ # Only draw selection highlights here (hover is done via fast PIL overlay)
1190
+ selected_type = (
1191
+ self._selected_element.get("type") if self._selected_element else None
1192
+ )
1193
+
1194
+ # Skip if selecting traces (handled separately in _plot_from_csv)
1195
+ if selected_type == "trace":
1196
+ selected_type = None
1197
+
1198
+ def add_highlight_box(text_obj, color, alpha, linewidth=2):
1199
+ """Add highlight rectangle around a text object (outline only)."""
1200
+ try:
1201
+ bbox = text_obj.get_window_extent(renderer)
1202
+ # Convert to figure coordinates
1203
+ fig_bbox = bbox.transformed(fig.transFigure.inverted())
1204
+ # Add padding
1205
+ padding = 0.01
1206
+ rect = FancyBboxPatch(
1207
+ (fig_bbox.x0 - padding, fig_bbox.y0 - padding),
1208
+ fig_bbox.width + 2 * padding,
1209
+ fig_bbox.height + 2 * padding,
1210
+ boxstyle="round,pad=0.02,rounding_size=0.01",
1211
+ facecolor="none",
1212
+ edgecolor=color,
1213
+ alpha=0.7,
1214
+ linewidth=linewidth,
1215
+ transform=fig.transFigure,
1216
+ zorder=100,
1217
+ )
1218
+ fig.patches.append(rect)
1219
+ except Exception:
1220
+ pass
1221
+
1222
+ def add_spine_highlight(spine, color, alpha, linewidth=2):
1223
+ """Add highlight to a spine/axis (outline only)."""
1224
+ try:
1225
+ bbox = spine.get_window_extent(renderer)
1226
+ fig_bbox = bbox.transformed(fig.transFigure.inverted())
1227
+ padding = 0.01
1228
+ rect = FancyBboxPatch(
1229
+ (fig_bbox.x0 - padding, fig_bbox.y0 - padding),
1230
+ fig_bbox.width + 2 * padding,
1231
+ fig_bbox.height + 2 * padding,
1232
+ boxstyle="round,pad=0.01",
1233
+ facecolor="none",
1234
+ edgecolor=color,
1235
+ alpha=0.7,
1236
+ linewidth=linewidth,
1237
+ transform=fig.transFigure,
1238
+ zorder=100,
1239
+ )
1240
+ fig.patches.append(rect)
1241
+ except Exception:
1242
+ pass
1243
+
1244
+ # Map element types to matplotlib objects
1245
+ element_map = {
1246
+ "title": ax.title,
1247
+ "xlabel": ax.xaxis.label,
1248
+ "ylabel": ax.yaxis.label,
1249
+ }
1250
+
1251
+ # Draw selection highlight (outline only, no fill)
1252
+ select_color = "#FFC850" # Soft warm yellow for outline
1253
+ if selected_type in element_map:
1254
+ add_highlight_box(
1255
+ element_map[selected_type], select_color, 0.0, linewidth=2
1256
+ )
1257
+ elif selected_type == "xaxis":
1258
+ add_spine_highlight(ax.spines["bottom"], select_color, 0.0, linewidth=2)
1259
+ elif selected_type == "yaxis":
1260
+ add_spine_highlight(ax.spines["left"], select_color, 0.0, linewidth=2)
1261
+ elif selected_type == "legend":
1262
+ legend = ax.get_legend()
1263
+ if legend:
1264
+ try:
1265
+ bbox = legend.get_window_extent(renderer)
1266
+ fig_bbox = bbox.transformed(fig.transFigure.inverted())
1267
+ padding = 0.01
1268
+ rect = FancyBboxPatch(
1269
+ (fig_bbox.x0 - padding, fig_bbox.y0 - padding),
1270
+ fig_bbox.width + 2 * padding,
1271
+ fig_bbox.height + 2 * padding,
1272
+ boxstyle="round,pad=0.02",
1273
+ facecolor="none",
1274
+ edgecolor=select_color,
1275
+ alpha=0.7,
1276
+ linewidth=2,
1277
+ transform=fig.transFigure,
1278
+ zorder=100,
1279
+ )
1280
+ fig.patches.append(rect)
1281
+ except Exception:
1282
+ pass
1283
+
1284
+ # Note: Hover highlights are now drawn via fast PIL overlay in _update_hover_overlay()
1285
+
1286
+ def _plot_from_csv(self, ax, o, highlight_trace=None, hover_trace=None):
1287
+ """Reconstruct plot from CSV data using trace info.
1288
+
1289
+ Parameters
1290
+ ----------
1291
+ ax : matplotlib.axes.Axes
1292
+ The axes to plot on
1293
+ o : dict
1294
+ Current overrides containing trace info
1295
+ highlight_trace : int, optional
1296
+ Index of trace to highlight with selection effect (yellow glow)
1297
+ hover_trace : int, optional
1298
+ Index of trace to highlight with hover effect (cyan glow)
1299
+ """
1300
+ import pandas as pd
1301
+ from ._defaults import _normalize_legend_loc
1302
+
1303
+ if not isinstance(self.csv_data, pd.DataFrame):
1304
+ return
1305
+
1306
+ df = self.csv_data
1307
+ linewidth = o.get("linewidth", 1.0)
1308
+ legend_visible = o.get("legend_visible", True)
1309
+ legend_fontsize = o.get("legend_fontsize", 6)
1310
+ legend_frameon = o.get("legend_frameon", False)
1311
+ legend_loc = _normalize_legend_loc(o.get("legend_loc", "best"))
1312
+
1313
+ traces = o.get("traces", [])
1314
+
1315
+ if traces:
1316
+ for i, trace in enumerate(traces):
1317
+ csv_cols = trace.get("csv_columns", {})
1318
+ x_col = csv_cols.get("x")
1319
+ y_col = csv_cols.get("y")
1320
+
1321
+ if x_col in df.columns and y_col in df.columns:
1322
+ trace_linewidth = trace.get("linewidth", linewidth)
1323
+ is_selected = highlight_trace is not None and i == highlight_trace
1324
+ is_hovered = (
1325
+ hover_trace is not None and i == hover_trace and not is_selected
1326
+ )
1327
+
1328
+ # Draw selection glow (yellow, stronger)
1329
+ if is_selected:
1330
+ ax.plot(
1331
+ df[x_col],
1332
+ df[y_col],
1333
+ color="yellow",
1334
+ linewidth=trace_linewidth * 4,
1335
+ alpha=0.5,
1336
+ zorder=0,
1337
+ )
1338
+ # Draw hover glow (cyan, subtler)
1339
+ elif is_hovered:
1340
+ ax.plot(
1341
+ df[x_col],
1342
+ df[y_col],
1343
+ color="cyan",
1344
+ linewidth=trace_linewidth * 3,
1345
+ alpha=0.3,
1346
+ zorder=0,
1347
+ )
1348
+
1349
+ ax.plot(
1350
+ df[x_col],
1351
+ df[y_col],
1352
+ label=trace.get("label", trace.get("id", "")),
1353
+ color=trace.get("color"),
1354
+ linestyle=trace.get("linestyle", "-"),
1355
+ linewidth=trace_linewidth
1356
+ * (1.5 if is_selected else (1.2 if is_hovered else 1.0)),
1357
+ marker=trace.get("marker", None),
1358
+ markersize=trace.get("markersize", 6),
1359
+ zorder=10 if is_selected else (5 if is_hovered else 1),
1360
+ )
1361
+
1362
+ if legend_visible and any(t.get("label") for t in traces):
1363
+ ax.legend(
1364
+ fontsize=legend_fontsize, frameon=legend_frameon, loc=legend_loc
1365
+ )
1366
+ else:
1367
+ # Fallback: parse column names
1368
+ cols = df.columns.tolist()
1369
+ trace_groups = {}
1370
+
1371
+ for col in cols:
1372
+ if col.endswith("_x"):
1373
+ trace_id = col[:-2]
1374
+ y_col = trace_id + "_y"
1375
+ if y_col in cols:
1376
+ parts = trace_id.split("_")
1377
+ label = parts[2] if len(parts) > 2 else trace_id
1378
+ trace_groups[trace_id] = {
1379
+ "x_col": col,
1380
+ "y_col": y_col,
1381
+ "label": label,
1382
+ }
1383
+
1384
+ if trace_groups:
1385
+ for trace_id, info in trace_groups.items():
1386
+ ax.plot(
1387
+ df[info["x_col"]],
1388
+ df[info["y_col"]],
1389
+ label=info["label"],
1390
+ linewidth=linewidth,
1391
+ )
1392
+ if legend_visible:
1393
+ ax.legend(
1394
+ fontsize=legend_fontsize, frameon=legend_frameon, loc=legend_loc
1395
+ )
1396
+ elif len(cols) >= 2:
1397
+ x_col = cols[0]
1398
+ for y_col in cols[1:]:
1399
+ try:
1400
+ ax.plot(
1401
+ df[x_col], df[y_col], label=str(y_col), linewidth=linewidth
1402
+ )
1403
+ except Exception:
1404
+ pass
1405
+ if len(cols) > 2 and legend_visible:
1406
+ ax.legend(
1407
+ fontsize=legend_fontsize, frameon=legend_frameon, loc=legend_loc
1408
+ )
1409
+
1410
+ def _get_trace_labels(self):
1411
+ """Get list of trace labels for selection combo."""
1412
+ traces = self.current_overrides.get("traces", [])
1413
+ if not traces:
1414
+ return ["(no traces)"]
1415
+ return [t.get("label", t.get("id", f"Trace {i}")) for i, t in enumerate(traces)]
1416
+
1417
+ def _get_all_element_labels(self):
1418
+ """Get list of all selectable element labels."""
1419
+ labels = []
1420
+
1421
+ # Fixed elements
1422
+ labels.append("Title")
1423
+ labels.append("X Label")
1424
+ labels.append("Y Label")
1425
+ labels.append("X Axis")
1426
+ labels.append("Y Axis")
1427
+ labels.append("Legend")
1428
+
1429
+ # Traces
1430
+ traces = self.current_overrides.get("traces", [])
1431
+ for i, t in enumerate(traces):
1432
+ label = t.get("label", t.get("id", f"Trace {i}"))
1433
+ labels.append(f"Trace: {label}")
1434
+
1435
+ return labels
1436
+
1437
+ def _on_preview_click(self, sender, app_data):
1438
+ """Handle click on preview image to select element."""
1439
+ import dearpygui.dearpygui as dpg
1440
+
1441
+ # Only handle left clicks
1442
+ if app_data != 0: # 0 = left button
1443
+ return
1444
+
1445
+ # Get mouse position relative to viewport
1446
+ mouse_pos = dpg.get_mouse_pos(local=False)
1447
+
1448
+ # Get preview image position and size
1449
+ if not dpg.does_item_exist("preview_image"):
1450
+ return
1451
+
1452
+ # Get the image item's position in the window
1453
+ img_pos = dpg.get_item_pos("preview_image")
1454
+ panel_pos = dpg.get_item_pos("preview_panel")
1455
+
1456
+ # Calculate click position relative to image
1457
+ click_x = mouse_pos[0] - panel_pos[0] - img_pos[0]
1458
+ click_y = mouse_pos[1] - panel_pos[1] - img_pos[1]
1459
+
1460
+ # Check if click is within image bounds (800x600)
1461
+ max_width, max_height = 800, 600
1462
+ if not (0 <= click_x <= max_width and 0 <= click_y <= max_height):
1463
+ return
1464
+
1465
+ # First check if click is on a fixed element (title, labels, axes, legend)
1466
+ element = self._find_clicked_element(click_x, click_y)
1467
+
1468
+ if element:
1469
+ self._select_element(element, dpg)
1470
+ else:
1471
+ # Fall back to trace selection
1472
+ trace_idx = self._find_nearest_trace(
1473
+ click_x, click_y, max_width, max_height
1474
+ )
1475
+ if trace_idx is not None:
1476
+ self._select_element({"type": "trace", "index": trace_idx}, dpg)
1477
+
1478
+ def _on_preview_hover(self, sender, app_data):
1479
+ """Handle mouse move for hover effects on preview (optimized with caching)."""
1480
+ import dearpygui.dearpygui as dpg
1481
+ import time
1482
+
1483
+ # Throttle hover updates - reduced to 16ms (~60fps) since we use fast overlay
1484
+ current_time = time.time()
1485
+ if current_time - self._last_hover_check < 0.016:
1486
+ return
1487
+ self._last_hover_check = current_time
1488
+
1489
+ # Get mouse position relative to viewport
1490
+ mouse_pos = dpg.get_mouse_pos(local=False)
1491
+
1492
+ # Get preview image position
1493
+ if not dpg.does_item_exist("preview_image"):
1494
+ return
1495
+
1496
+ img_pos = dpg.get_item_pos("preview_image")
1497
+ panel_pos = dpg.get_item_pos("preview_panel")
1498
+
1499
+ # Calculate hover position relative to image
1500
+ hover_x = mouse_pos[0] - panel_pos[0] - img_pos[0]
1501
+ hover_y = mouse_pos[1] - panel_pos[1] - img_pos[1]
1502
+
1503
+ # Check if within image bounds
1504
+ max_width, max_height = 800, 600
1505
+ if not (0 <= hover_x <= max_width and 0 <= hover_y <= max_height):
1506
+ if self._hovered_element is not None:
1507
+ self._hovered_element = None
1508
+ dpg.set_value("hover_text", "")
1509
+ # Use fast overlay update instead of full redraw
1510
+ self._update_hover_overlay(dpg)
1511
+ return
1512
+
1513
+ # Find element under cursor
1514
+ element = self._find_clicked_element(hover_x, hover_y)
1515
+
1516
+ if element is None:
1517
+ # Check for trace hover
1518
+ trace_idx = self._find_nearest_trace(
1519
+ hover_x, hover_y, max_width, max_height
1520
+ )
1521
+ if trace_idx is not None:
1522
+ element = {"type": "trace", "index": trace_idx}
1523
+
1524
+ # Check if hover changed
1525
+ old_hover = self._hovered_element
1526
+ if element != old_hover:
1527
+ self._hovered_element = element
1528
+ if element:
1529
+ elem_type = element.get("type", "")
1530
+ elem_idx = element.get("index")
1531
+ if elem_type == "trace" and elem_idx is not None:
1532
+ traces = self.current_overrides.get("traces", [])
1533
+ if elem_idx < len(traces):
1534
+ label = traces[elem_idx].get("label", f"Trace {elem_idx}")
1535
+ dpg.set_value("hover_text", f"Hover: {label} (click to select)")
1536
+ else:
1537
+ label = elem_type.replace("x", "X ").replace("y", "Y ").title()
1538
+ dpg.set_value("hover_text", f"Hover: {label} (click to select)")
1539
+ else:
1540
+ dpg.set_value("hover_text", "")
1541
+
1542
+ # Use fast overlay update for hover (no matplotlib re-render)
1543
+ self._update_hover_overlay(dpg)
1544
+
1545
+ def _find_clicked_element(self, click_x, click_y):
1546
+ """Find which element was clicked based on stored bboxes."""
1547
+ if not self._element_bboxes:
1548
+ return None
1549
+
1550
+ # Check each element bbox
1551
+ for element_type, bbox in self._element_bboxes.items():
1552
+ if bbox is None:
1553
+ continue
1554
+ x0, y0, x1, y1 = bbox
1555
+ if x0 <= click_x <= x1 and y0 <= click_y <= y1:
1556
+ return {"type": element_type, "index": None}
1557
+
1558
+ return None
1559
+
1560
+ def _select_element(self, element, dpg):
1561
+ """Select an element and show appropriate controls."""
1562
+ self._selected_element = element
1563
+ elem_type = element.get("type")
1564
+ elem_idx = element.get("index")
1565
+
1566
+ # Hide all control groups first
1567
+ dpg.configure_item("trace_controls_group", show=False)
1568
+ dpg.configure_item("text_controls_group", show=False)
1569
+ dpg.configure_item("axis_controls_group", show=False)
1570
+ dpg.configure_item("legend_controls_group", show=False)
1571
+
1572
+ # Update combo selection
1573
+ if elem_type == "trace":
1574
+ traces = self.current_overrides.get("traces", [])
1575
+ if elem_idx is not None and elem_idx < len(traces):
1576
+ trace = traces[elem_idx]
1577
+ label = (
1578
+ f"Trace: {trace.get('label', trace.get('id', f'Trace {elem_idx}'))}"
1579
+ )
1580
+ dpg.set_value("element_selector_combo", label)
1581
+
1582
+ # Show trace controls and populate
1583
+ dpg.configure_item("trace_controls_group", show=True)
1584
+ self._selected_trace_index = elem_idx
1585
+ dpg.set_value("trace_label_input", trace.get("label", ""))
1586
+
1587
+ color_hex = trace.get("color", "#0080bf")
1588
+ try:
1589
+ r = int(color_hex[1:3], 16)
1590
+ g = int(color_hex[3:5], 16)
1591
+ b = int(color_hex[5:7], 16)
1592
+ dpg.set_value("trace_color_picker", [r, g, b])
1593
+ except (ValueError, IndexError):
1594
+ dpg.set_value("trace_color_picker", [128, 128, 191])
1595
+
1596
+ dpg.set_value("trace_linewidth_slider", trace.get("linewidth", 1.0))
1597
+ dpg.set_value("trace_linestyle_combo", trace.get("linestyle", "-"))
1598
+ dpg.set_value("trace_marker_combo", trace.get("marker", "") or "")
1599
+ dpg.set_value("trace_markersize_slider", trace.get("markersize", 6.0))
1600
+
1601
+ dpg.set_value(
1602
+ "selection_text",
1603
+ f"Selected: {trace.get('label', f'Trace {elem_idx}')}",
1604
+ )
1605
+
1606
+ elif elem_type in ("title", "xlabel", "ylabel"):
1607
+ dpg.set_value(
1608
+ "element_selector_combo",
1609
+ elem_type.replace("x", "X ").replace("y", "Y ").title(),
1610
+ )
1611
+ dpg.configure_item("text_controls_group", show=True)
1612
+
1613
+ o = self.current_overrides
1614
+ if elem_type == "title":
1615
+ dpg.set_value("element_text_input", o.get("title", ""))
1616
+ dpg.set_value("element_fontsize_slider", o.get("title_fontsize", 8))
1617
+ elif elem_type == "xlabel":
1618
+ dpg.set_value("element_text_input", o.get("xlabel", ""))
1619
+ dpg.set_value("element_fontsize_slider", o.get("axis_fontsize", 7))
1620
+ elif elem_type == "ylabel":
1621
+ dpg.set_value("element_text_input", o.get("ylabel", ""))
1622
+ dpg.set_value("element_fontsize_slider", o.get("axis_fontsize", 7))
1623
+
1624
+ dpg.set_value("selection_text", f"Selected: {elem_type.title()}")
1625
+
1626
+ elif elem_type in ("xaxis", "yaxis"):
1627
+ label = "X Axis" if elem_type == "xaxis" else "Y Axis"
1628
+ dpg.set_value("element_selector_combo", label)
1629
+ dpg.configure_item("axis_controls_group", show=True)
1630
+
1631
+ o = self.current_overrides
1632
+ dpg.set_value("axis_linewidth_slider", o.get("axis_width", 0.2))
1633
+ dpg.set_value("axis_tick_length_slider", o.get("tick_length", 0.8))
1634
+ dpg.set_value("axis_tick_fontsize_slider", o.get("tick_fontsize", 7))
1635
+
1636
+ if elem_type == "xaxis":
1637
+ dpg.set_value(
1638
+ "axis_show_spine_checkbox", not o.get("hide_bottom_spine", False)
1639
+ )
1640
+ else:
1641
+ dpg.set_value(
1642
+ "axis_show_spine_checkbox", not o.get("hide_left_spine", False)
1643
+ )
1644
+
1645
+ dpg.set_value("selection_text", f"Selected: {label}")
1646
+
1647
+ elif elem_type == "legend":
1648
+ dpg.set_value("element_selector_combo", "Legend")
1649
+ dpg.configure_item("legend_controls_group", show=True)
1650
+
1651
+ o = self.current_overrides
1652
+ dpg.set_value("legend_visible_edit", o.get("legend_visible", True))
1653
+ dpg.set_value("legend_frameon_edit", o.get("legend_frameon", False))
1654
+ dpg.set_value("legend_loc_edit", o.get("legend_loc", "best"))
1655
+ dpg.set_value("legend_fontsize_edit", o.get("legend_fontsize", 6))
1656
+
1657
+ dpg.set_value("selection_text", "Selected: Legend")
1658
+
1659
+ # Redraw with highlight
1660
+ self._update_preview(dpg)
1661
+
1662
+ def _on_element_selected(self, sender, app_data):
1663
+ """Handle element selection from combo box."""
1664
+ import dearpygui.dearpygui as dpg
1665
+
1666
+ if app_data == "Title":
1667
+ self._select_element({"type": "title", "index": None}, dpg)
1668
+ elif app_data == "X Label":
1669
+ self._select_element({"type": "xlabel", "index": None}, dpg)
1670
+ elif app_data == "Y Label":
1671
+ self._select_element({"type": "ylabel", "index": None}, dpg)
1672
+ elif app_data == "X Axis":
1673
+ self._select_element({"type": "xaxis", "index": None}, dpg)
1674
+ elif app_data == "Y Axis":
1675
+ self._select_element({"type": "yaxis", "index": None}, dpg)
1676
+ elif app_data == "Legend":
1677
+ self._select_element({"type": "legend", "index": None}, dpg)
1678
+ elif app_data.startswith("Trace: "):
1679
+ # Find trace index
1680
+ trace_label = app_data[7:] # Remove "Trace: " prefix
1681
+ traces = self.current_overrides.get("traces", [])
1682
+ for i, t in enumerate(traces):
1683
+ if t.get("label", t.get("id", f"Trace {i}")) == trace_label:
1684
+ self._select_element({"type": "trace", "index": i}, dpg)
1685
+ break
1686
+
1687
+ def _on_text_element_change(self, sender, app_data, user_data=None):
1688
+ """Handle changes to text element properties."""
1689
+ import dearpygui.dearpygui as dpg
1690
+
1691
+ if self._selected_element is None:
1692
+ return
1693
+
1694
+ elem_type = self._selected_element.get("type")
1695
+ if elem_type not in ("title", "xlabel", "ylabel"):
1696
+ return
1697
+
1698
+ text = dpg.get_value("element_text_input")
1699
+ fontsize = dpg.get_value("element_fontsize_slider")
1700
+
1701
+ if elem_type == "title":
1702
+ self.current_overrides["title"] = text
1703
+ self.current_overrides["title_fontsize"] = fontsize
1704
+ elif elem_type == "xlabel":
1705
+ self.current_overrides["xlabel"] = text
1706
+ self.current_overrides["axis_fontsize"] = fontsize
1707
+ elif elem_type == "ylabel":
1708
+ self.current_overrides["ylabel"] = text
1709
+ self.current_overrides["axis_fontsize"] = fontsize
1710
+
1711
+ self._user_modified = True
1712
+ self._update_preview(dpg)
1713
+
1714
+ def _on_axis_element_change(self, sender, app_data, user_data=None):
1715
+ """Handle changes to axis element properties."""
1716
+ import dearpygui.dearpygui as dpg
1717
+
1718
+ if self._selected_element is None:
1719
+ return
1720
+
1721
+ elem_type = self._selected_element.get("type")
1722
+ if elem_type not in ("xaxis", "yaxis"):
1723
+ return
1724
+
1725
+ self.current_overrides["axis_width"] = dpg.get_value("axis_linewidth_slider")
1726
+ self.current_overrides["tick_length"] = dpg.get_value("axis_tick_length_slider")
1727
+ self.current_overrides["tick_fontsize"] = dpg.get_value(
1728
+ "axis_tick_fontsize_slider"
1729
+ )
1730
+
1731
+ show_spine = dpg.get_value("axis_show_spine_checkbox")
1732
+ if elem_type == "xaxis":
1733
+ self.current_overrides["hide_bottom_spine"] = not show_spine
1734
+ else:
1735
+ self.current_overrides["hide_left_spine"] = not show_spine
1736
+
1737
+ self._user_modified = True
1738
+ self._update_preview(dpg)
1739
+
1740
+ def _on_legend_element_change(self, sender, app_data, user_data=None):
1741
+ """Handle changes to legend element properties."""
1742
+ import dearpygui.dearpygui as dpg
1743
+
1744
+ if self._selected_element is None:
1745
+ return
1746
+
1747
+ elem_type = self._selected_element.get("type")
1748
+ if elem_type != "legend":
1749
+ return
1750
+
1751
+ self.current_overrides["legend_visible"] = dpg.get_value("legend_visible_edit")
1752
+ self.current_overrides["legend_frameon"] = dpg.get_value("legend_frameon_edit")
1753
+ self.current_overrides["legend_loc"] = dpg.get_value("legend_loc_edit")
1754
+ self.current_overrides["legend_fontsize"] = dpg.get_value(
1755
+ "legend_fontsize_edit"
1756
+ )
1757
+
1758
+ self._user_modified = True
1759
+ self._update_preview(dpg)
1760
+
1761
+ def _deselect_element(self, sender=None, app_data=None, user_data=None):
1762
+ """Deselect the current element."""
1763
+ import dearpygui.dearpygui as dpg
1764
+
1765
+ self._selected_element = None
1766
+ self._selected_trace_index = None
1767
+
1768
+ # Hide all control groups
1769
+ dpg.configure_item("trace_controls_group", show=False)
1770
+ dpg.configure_item("text_controls_group", show=False)
1771
+ dpg.configure_item("axis_controls_group", show=False)
1772
+ dpg.configure_item("legend_controls_group", show=False)
1773
+
1774
+ dpg.set_value("selection_text", "")
1775
+ dpg.set_value("element_selector_combo", "")
1776
+ self._update_preview(dpg)
1777
+
1778
+ def _find_nearest_trace(self, click_x, click_y, preview_width, preview_height):
1779
+ """Find the nearest trace to the click position."""
1780
+ import pandas as pd
1781
+ import numpy as np
1782
+
1783
+ if self.csv_data is None or not isinstance(self.csv_data, pd.DataFrame):
1784
+ return None
1785
+
1786
+ traces = self.current_overrides.get("traces", [])
1787
+ if not traces:
1788
+ return None
1789
+
1790
+ # Get preview bounds from last render
1791
+ if self._preview_bounds is None:
1792
+ return None
1793
+
1794
+ x_offset, y_offset, fig_width, fig_height = self._preview_bounds
1795
+
1796
+ # Adjust click coordinates to figure space
1797
+ fig_x = click_x - x_offset
1798
+ fig_y = click_y - y_offset
1799
+
1800
+ # Check if click is within figure bounds
1801
+ if not (0 <= fig_x <= fig_width and 0 <= fig_y <= fig_height):
1802
+ return None
1803
+
1804
+ # Get axes transform info
1805
+ if self._axes_transform is None:
1806
+ return None
1807
+
1808
+ ax_x0, ax_y0, ax_width, ax_height, xlim, ylim = self._axes_transform
1809
+
1810
+ # Convert figure pixel to axes pixel
1811
+ ax_pixel_x = fig_x - ax_x0
1812
+ ax_pixel_y = fig_y - ax_y0
1813
+
1814
+ # Check if click is within axes bounds
1815
+ if not (0 <= ax_pixel_x <= ax_width and 0 <= ax_pixel_y <= ax_height):
1816
+ return None
1817
+
1818
+ # Convert axes pixel to data coordinates
1819
+ # Note: y is flipped (0 at top in pixel space)
1820
+ data_x = xlim[0] + (ax_pixel_x / ax_width) * (xlim[1] - xlim[0])
1821
+ data_y = ylim[1] - (ax_pixel_y / ax_height) * (ylim[1] - ylim[0])
1822
+
1823
+ # Find nearest trace
1824
+ df = self.csv_data
1825
+ min_dist = float("inf")
1826
+ nearest_idx = None
1827
+
1828
+ for i, trace in enumerate(traces):
1829
+ csv_cols = trace.get("csv_columns", {})
1830
+ x_col = csv_cols.get("x")
1831
+ y_col = csv_cols.get("y")
1832
+
1833
+ if x_col not in df.columns or y_col not in df.columns:
1834
+ continue
1835
+
1836
+ trace_x = df[x_col].dropna().values
1837
+ trace_y = df[y_col].dropna().values
1838
+
1839
+ if len(trace_x) == 0:
1840
+ continue
1841
+
1842
+ # Normalize coordinates for distance calculation
1843
+ x_range = xlim[1] - xlim[0]
1844
+ y_range = ylim[1] - ylim[0]
1845
+
1846
+ norm_click_x = (data_x - xlim[0]) / x_range if x_range > 0 else 0
1847
+ norm_click_y = (data_y - ylim[0]) / y_range if y_range > 0 else 0
1848
+
1849
+ norm_trace_x = (trace_x - xlim[0]) / x_range if x_range > 0 else trace_x
1850
+ norm_trace_y = (trace_y - ylim[0]) / y_range if y_range > 0 else trace_y
1851
+
1852
+ # Calculate distances to all points
1853
+ distances = np.sqrt(
1854
+ (norm_trace_x - norm_click_x) ** 2 + (norm_trace_y - norm_click_y) ** 2
1855
+ )
1856
+ min_trace_dist = np.min(distances)
1857
+
1858
+ if min_trace_dist < min_dist:
1859
+ min_dist = min_trace_dist
1860
+ nearest_idx = i
1861
+
1862
+ # Only select if close enough (threshold in normalized space)
1863
+ if min_dist < 0.1: # 10% of plot area
1864
+ return nearest_idx
1865
+
1866
+ return None
1867
+
1868
+ def _on_trace_property_change(self, sender, app_data, user_data=None):
1869
+ """Handle changes to selected trace properties."""
1870
+ import dearpygui.dearpygui as dpg
1871
+
1872
+ if self._selected_trace_index is None:
1873
+ return
1874
+
1875
+ traces = self.current_overrides.get("traces", [])
1876
+ if self._selected_trace_index >= len(traces):
1877
+ return
1878
+
1879
+ trace = traces[self._selected_trace_index]
1880
+
1881
+ # Update trace properties from widgets
1882
+ trace["label"] = dpg.get_value("trace_label_input")
1883
+
1884
+ # Convert RGB to hex
1885
+ color_rgb = dpg.get_value("trace_color_picker")
1886
+ if color_rgb and len(color_rgb) >= 3:
1887
+ r, g, b = int(color_rgb[0]), int(color_rgb[1]), int(color_rgb[2])
1888
+ trace["color"] = f"#{r:02x}{g:02x}{b:02x}"
1889
+
1890
+ trace["linewidth"] = dpg.get_value("trace_linewidth_slider")
1891
+ trace["linestyle"] = dpg.get_value("trace_linestyle_combo")
1892
+
1893
+ marker = dpg.get_value("trace_marker_combo")
1894
+ trace["marker"] = marker if marker else None
1895
+
1896
+ trace["markersize"] = dpg.get_value("trace_markersize_slider")
1897
+
1898
+ self._user_modified = True
1899
+ self._update_preview(dpg)
1900
+
1901
+ def _save_manual(self, sender=None, app_data=None, user_data=None):
1902
+ """Save current overrides to .manual.json."""
1903
+ import dearpygui.dearpygui as dpg
1904
+ from .edit import save_manual_overrides
1905
+
1906
+ try:
1907
+ self._collect_overrides(dpg)
1908
+ manual_path = save_manual_overrides(self.json_path, self.current_overrides)
1909
+ dpg.set_value("status_text", f"Saved: {manual_path.name}")
1910
+ except Exception as e:
1911
+ dpg.set_value("status_text", f"Error: {str(e)}")
1912
+
1913
+ def _reset_overrides(self, sender=None, app_data=None, user_data=None):
1914
+ """Reset to initial overrides."""
1915
+ import dearpygui.dearpygui as dpg
1916
+
1917
+ self.current_overrides = copy.deepcopy(self._initial_overrides)
1918
+ self._user_modified = False
1919
+
1920
+ # Update all widgets
1921
+ dpg.set_value("title_input", self.current_overrides.get("title", ""))
1922
+ dpg.set_value("xlabel_input", self.current_overrides.get("xlabel", ""))
1923
+ dpg.set_value("ylabel_input", self.current_overrides.get("ylabel", ""))
1924
+ dpg.set_value("linewidth_slider", self.current_overrides.get("linewidth", 1.0))
1925
+ dpg.set_value("grid_checkbox", self.current_overrides.get("grid", False))
1926
+ dpg.set_value(
1927
+ "transparent_checkbox", self.current_overrides.get("transparent", True)
1928
+ )
1929
+
1930
+ self._update_preview(dpg)
1931
+ dpg.set_value("status_text", "Reset to original")
1932
+
1933
+ def _export_png(self, sender=None, app_data=None, user_data=None):
1934
+ """Export current view to PNG."""
1935
+ import dearpygui.dearpygui as dpg
1936
+ import matplotlib
1937
+
1938
+ matplotlib.use("Agg")
1939
+ import matplotlib.pyplot as plt
1940
+
1941
+ try:
1942
+ self._collect_overrides(dpg)
1943
+ output_path = self.json_path.with_suffix(".edited.png")
1944
+
1945
+ # Full resolution render
1946
+ o = self.current_overrides
1947
+ fig_size = o.get("fig_size", [3.15, 2.68])
1948
+ dpi = o.get("dpi", 300)
1949
+
1950
+ fig, ax = plt.subplots(figsize=fig_size, dpi=dpi)
1951
+
1952
+ if self.csv_data is not None:
1953
+ self._plot_from_csv(ax, o)
1954
+
1955
+ if o.get("title"):
1956
+ ax.set_title(o["title"], fontsize=o.get("title_fontsize", 8))
1957
+ if o.get("xlabel"):
1958
+ ax.set_xlabel(o["xlabel"], fontsize=o.get("axis_fontsize", 7))
1959
+ if o.get("ylabel"):
1960
+ ax.set_ylabel(o["ylabel"], fontsize=o.get("axis_fontsize", 7))
1961
+
1962
+ fig.tight_layout()
1963
+ fig.savefig(
1964
+ output_path,
1965
+ dpi=dpi,
1966
+ bbox_inches="tight",
1967
+ transparent=o.get("transparent", True),
1968
+ )
1969
+ plt.close(fig)
1970
+
1971
+ dpg.set_value("status_text", f"Exported: {output_path.name}")
1972
+ except Exception as e:
1973
+ dpg.set_value("status_text", f"Error: {str(e)}")
1974
+
1975
+
1976
+ # EOF