scitex 2.10.3__py3-none-any.whl → 2.11.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- scitex/__init__.py +1 -4
- scitex/__version__.py +1 -1
- scitex/_install_guide.py +14 -2
- scitex/bridge/_figrecipe.py +1 -1
- scitex/bridge/_helpers.py +1 -1
- scitex/bridge/_plt_vis.py +1 -1
- scitex/bridge/_stats_plt.py +1 -1
- scitex/bridge/_stats_vis.py +2 -2
- scitex/{fig → canvas}/__init__.py +84 -96
- scitex/{fig → canvas}/backend/_parser.py +1 -1
- scitex/{fig → canvas}/canvas.py +13 -14
- scitex/{fts/_fig/_editor → canvas/editor}/_defaults.py +2 -2
- scitex/{fig → canvas}/editor/edit/__init__.py +11 -14
- scitex/{fig → canvas}/editor/edit/bundle_resolver.py +56 -48
- scitex/{fig → canvas}/editor/edit/editor_launcher.py +79 -26
- scitex/{fts/_fig/_editor/_cui/_panel_loader.py → canvas/editor/edit/panel_loader.py} +8 -8
- scitex/{fts/_fig/_editor/_gui/_flask_editor → canvas/editor/flask_editor}/_bbox.py +2 -1
- scitex/{fts/_fig/_editor/_gui/_flask_editor → canvas/editor/flask_editor}/_core.py +84 -84
- scitex/{fts/_fig/_editor/_gui/_flask_editor → canvas/editor/flask_editor}/_renderer.py +7 -6
- scitex/{fts/_fig/_editor/_gui/_flask_editor → canvas/editor/flask_editor}/static/css/features/canvas.css +2 -2
- scitex/{fig → canvas}/editor/flask_editor/static/css/features/panel-grid.css +1 -1
- scitex/{fig → canvas}/editor/flask_editor/static/js/core/api.js +3 -4
- scitex/{fig → canvas}/editor/flask_editor/static/js/editor/preview.js +5 -5
- scitex/{fig → canvas}/editor/flask_editor/templates/_html.py +3 -3
- scitex/{fig → canvas}/editor/flask_editor/templates/_scripts.py +10 -10
- scitex/{fig → canvas}/editor/flask_editor/templates/_styles.py +3 -3
- scitex/{fig → canvas}/io/__init__.py +32 -38
- scitex/{fig → canvas}/io/_bundle.py +217 -154
- scitex/{fig → canvas}/io/_canvas.py +1 -1
- scitex/{fig → canvas}/io/_data.py +1 -1
- scitex/{fig → canvas}/io/_export.py +1 -1
- scitex/{fig → canvas}/io/_load.py +1 -1
- scitex/{fig → canvas}/io/_panel.py +1 -1
- scitex/{fig → canvas}/io/_save.py +1 -1
- scitex/{fig → canvas}/model/__init__.py +1 -1
- scitex/{fig → canvas}/model/_annotations.py +1 -1
- scitex/{fig → canvas}/model/_axes.py +1 -1
- scitex/{fig → canvas}/model/_figure.py +1 -1
- scitex/{fig → canvas}/model/_guides.py +1 -1
- scitex/{fig → canvas}/model/_plot.py +1 -1
- scitex/{fig → canvas}/model/_styles.py +1 -1
- scitex/{fig → canvas}/utils/__init__.py +1 -1
- scitex/cli/convert.py +10 -6
- scitex/diagram/README.md +7 -7
- scitex/io/__init__.py +7 -19
- scitex/io/_load.py +15 -19
- scitex/io/_load_modules/_canvas.py +2 -2
- scitex/io/_load_modules/_con.py +5 -5
- scitex/io/_load_modules/_eeg.py +16 -12
- scitex/io/_save.py +11 -16
- scitex/io/_save_modules/__init__.py +6 -10
- scitex/io/_save_modules/_canvas.py +3 -3
- scitex/io/_save_modules/_plot_bundle.py +112 -0
- scitex/io/_save_modules/{_pltz_stx.py → _plot_scitex.py} +7 -7
- scitex/io/_save_modules/_stx_bundle.py +16 -16
- scitex/io/bundle/README.md +89 -80
- scitex/{fts/_bundle/_FTS.py → io/bundle/_Bundle.py} +197 -95
- scitex/io/bundle/__init__.py +67 -35
- scitex/{fts/_bundle → io/bundle}/_children.py +32 -40
- scitex/io/bundle/_core.py +184 -97
- scitex/{fts/_bundle/_dataclasses/_Node.py → io/bundle/_dataclasses/_Spec.py} +29 -23
- scitex/{fts/_bundle/_dataclasses/_NodeRefs.py → io/bundle/_dataclasses/_SpecRefs.py} +6 -6
- scitex/{fts/_bundle → io/bundle}/_dataclasses/__init__.py +4 -4
- scitex/{fts/_bundle → io/bundle}/_loader.py +19 -19
- scitex/io/bundle/_manifest.py +99 -0
- scitex/{fts/_bundle → io/bundle}/_mpl_helpers.py +119 -28
- scitex/io/bundle/_nested.py +113 -100
- scitex/{fts/_bundle → io/bundle}/_saver.py +13 -14
- scitex/{fts/_bundle → io/bundle}/_storage.py +3 -3
- scitex/io/bundle/_types.py +41 -16
- scitex/{fts/_bundle → io/bundle}/_validation.py +20 -18
- scitex/io/bundle/_zip.py +21 -31
- scitex/{fts/_kinds → io/bundle/kinds}/_plot/_backend/_parser.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_plot/_models/_Annotations.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_plot/_models/_Axes.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_plot/_models/_Figure.py +1 -1
- scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_Guides.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_plot/_models/_Plot.py +1 -1
- scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_Styles.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_plot/_utils/_plot_layout.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_table/_latex/__init__.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_table/_latex/_editor/_app.py +1 -1
- scitex/{fts/_tables → io/bundle/kinds/_table}/_latex/_export.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_table/_latex/_figure_exporter.py +1 -1
- scitex/{fts/_kinds → io/bundle/kinds}/_table/_latex/_table_exporter.py +1 -1
- scitex/io/bundle/schemas/__init__.py +30 -0
- scitex/parallel/_run.py +5 -4
- scitex/path/_find.py +60 -83
- scitex/path/_get_module_path.py +23 -21
- scitex/path/_get_spath.py +6 -27
- scitex/path/_getsize.py +23 -9
- scitex/path/_increment_version.py +31 -38
- scitex/path/_mk_spath.py +26 -29
- scitex/path/_path.py +5 -12
- scitex/path/_split.py +27 -15
- scitex/path/_this_path.py +23 -9
- scitex/plt/_subplots/_AxisWrapperMixins/_MatplotlibPlotMixin/__init__.py +2 -1
- scitex/plt/_subplots/_AxisWrapperMixins/__init__.py +2 -2
- scitex/plt/gallery/_generate.py +76 -50
- scitex/plt/io/__init__.py +17 -19
- scitex/plt/io/_bundle.py +99 -52
- scitex/plt/io/_layered_bundle.py +303 -168
- scitex/plt/utils/_csv_column_naming.py +250 -118
- scitex/schema/__init__.py +69 -73
- scitex/schema/_canvas.py +1 -1
- scitex/schema/_stats.py +2 -2
- scitex/stats/__init__.py +30 -33
- scitex/stats/_schema.py +1 -1
- scitex/stats/io/__init__.py +10 -11
- scitex/stats/io/_bundle.py +16 -16
- {scitex-2.10.3.dist-info → scitex-2.11.0.dist-info}/METADATA +190 -73
- {scitex-2.10.3.dist-info → scitex-2.11.0.dist-info}/RECORD +237 -360
- scitex/fig/editor/_defaults.py +0 -300
- scitex/fig/editor/edit/panel_loader.py +0 -232
- scitex/fig/editor/flask_editor/_bbox.py +0 -1299
- scitex/fig/editor/flask_editor/_core.py +0 -1429
- scitex/fig/editor/flask_editor/_renderer.py +0 -813
- scitex/fig/editor/flask_editor/static/css/features/canvas.css +0 -176
- scitex/fts/README.md +0 -262
- scitex/fts/TODO.md +0 -66
- scitex/fts/__init__.py +0 -90
- scitex/fts/_bundle/README_IN_BUNDLE.md +0 -102
- scitex/fts/_bundle/__init__.py +0 -38
- scitex/fts/_bundle/_utils/__init__.py +0 -55
- scitex/fts/_bundle/_utils/_const.py +0 -26
- scitex/fts/_bundle/_utils/_errors.py +0 -73
- scitex/fts/_bundle/_utils/_generate.py +0 -21
- scitex/fts/_bundle/_utils/_types.py +0 -76
- scitex/fts/_bundle/_zipbundle.py +0 -165
- scitex/fts/_fig/__init__.py +0 -22
- scitex/fts/_fig/_backend/_parser.py +0 -188
- scitex/fts/_fig/_editor/__init__.py +0 -14
- scitex/fts/_fig/_editor/_cui/__init__.py +0 -33
- scitex/fts/_fig/_editor/_cui/_backend_detector.py +0 -39
- scitex/fts/_fig/_editor/_cui/_bundle_resolver.py +0 -366
- scitex/fts/_fig/_editor/_cui/_editor_launcher.py +0 -175
- scitex/fts/_fig/_editor/_cui/_manual_handler.py +0 -52
- scitex/fts/_fig/_editor/_cui/_path_resolver.py +0 -66
- scitex/fts/_fig/_editor/_gui/__init__.py +0 -11
- scitex/fts/_fig/_editor/_gui/_flask_editor/__init__.py +0 -20
- scitex/fts/_fig/_editor/_gui/_flask_editor/_plotter.py +0 -664
- scitex/fts/_fig/_editor/_gui/_flask_editor/_utils.py +0 -79
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/base/reset.css +0 -41
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/base/typography.css +0 -16
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/base/variables.css +0 -85
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/components/buttons.css +0 -217
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/components/context-menu.css +0 -93
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/components/dropdown.css +0 -57
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/components/forms.css +0 -112
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/components/modal.css +0 -59
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/components/sections.css +0 -212
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/features/element-inspector.css +0 -190
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/features/loading.css +0 -59
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/features/overlay.css +0 -45
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/features/panel-grid.css +0 -95
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/features/selection.css +0 -101
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/features/statistics.css +0 -138
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/index.css +0 -31
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/layout/container.css +0 -7
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/layout/controls.css +0 -56
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/css/layout/preview.css +0 -78
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/alignment/axis.js +0 -314
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/alignment/basic.js +0 -107
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/alignment/distribute.js +0 -54
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/canvas/canvas.js +0 -172
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/canvas/dragging.js +0 -258
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/canvas/resize.js +0 -48
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/canvas/selection.js +0 -71
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/core/api.js +0 -288
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/core/state.js +0 -143
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/core/utils.js +0 -245
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/dev/element-inspector.js +0 -992
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/editor/bbox.js +0 -339
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/editor/element-drag.js +0 -286
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/editor/overlay.js +0 -371
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/editor/preview.js +0 -293
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/main.js +0 -426
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/shortcuts/context-menu.js +0 -152
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/shortcuts/keyboard.js +0 -265
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/ui/controls.js +0 -184
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/ui/download.js +0 -57
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/ui/help.js +0 -100
- scitex/fts/_fig/_editor/_gui/_flask_editor/static/js/ui/theme.js +0 -34
- scitex/fts/_fig/_editor/_gui/_flask_editor/templates/__init__.py +0 -124
- scitex/fts/_fig/_editor/_gui/_flask_editor/templates/_html.py +0 -851
- scitex/fts/_fig/_editor/_gui/_flask_editor/templates/_scripts.py +0 -4932
- scitex/fts/_fig/_editor/_gui/_flask_editor/templates/_styles.py +0 -1657
- scitex/fts/_fig/_editor/_gui/_flask_editor.py +0 -36
- scitex/fts/_fig/_models/_Annotations.py +0 -115
- scitex/fts/_fig/_models/_Axes.py +0 -152
- scitex/fts/_fig/_models/_Figure.py +0 -138
- scitex/fts/_fig/_models/_Plot.py +0 -123
- scitex/fts/_fig/_utils/_plot_layout.py +0 -397
- scitex/fts/_kinds/_figure/_composite.py +0 -345
- scitex/fts/_kinds/_plot/_backend/__init__.py +0 -53
- scitex/fts/_kinds/_plot/_backend/_export.py +0 -165
- scitex/fts/_kinds/_plot/_backend/_render.py +0 -538
- scitex/fts/_kinds/_plot/_dataclasses/_ChannelEncoding.py +0 -46
- scitex/fts/_kinds/_plot/_dataclasses/_Encoding.py +0 -82
- scitex/fts/_kinds/_plot/_dataclasses/_Theme.py +0 -441
- scitex/fts/_kinds/_plot/_dataclasses/_TraceEncoding.py +0 -52
- scitex/fts/_kinds/_plot/_dataclasses/__init__.py +0 -47
- scitex/fts/_kinds/_plot/_models/_Guides.py +0 -104
- scitex/fts/_kinds/_plot/_models/_Styles.py +0 -245
- scitex/fts/_kinds/_plot/_models/__init__.py +0 -80
- scitex/fts/_kinds/_plot/_models/_plot_types/__init__.py +0 -156
- scitex/fts/_kinds/_plot/_models/_plot_types/_bar.py +0 -43
- scitex/fts/_kinds/_plot/_models/_plot_types/_box.py +0 -38
- scitex/fts/_kinds/_plot/_models/_plot_types/_distribution.py +0 -36
- scitex/fts/_kinds/_plot/_models/_plot_types/_errorbar.py +0 -60
- scitex/fts/_kinds/_plot/_models/_plot_types/_histogram.py +0 -30
- scitex/fts/_kinds/_plot/_models/_plot_types/_image.py +0 -61
- scitex/fts/_kinds/_plot/_models/_plot_types/_line.py +0 -57
- scitex/fts/_kinds/_plot/_models/_plot_types/_scatter.py +0 -30
- scitex/fts/_kinds/_plot/_models/_plot_types/_seaborn.py +0 -121
- scitex/fts/_kinds/_plot/_models/_plot_types/_violin.py +0 -36
- scitex/fts/_kinds/_plot/_utils/__init__.py +0 -129
- scitex/fts/_kinds/_plot/_utils/_auto_layout.py +0 -127
- scitex/fts/_kinds/_plot/_utils/_calc_bounds.py +0 -111
- scitex/fts/_kinds/_plot/_utils/_const_sizes.py +0 -48
- scitex/fts/_kinds/_plot/_utils/_convert_coords.py +0 -77
- scitex/fts/_kinds/_plot/_utils/_get_template.py +0 -178
- scitex/fts/_kinds/_plot/_utils/_normalize.py +0 -73
- scitex/fts/_kinds/_plot/_utils/_validate.py +0 -197
- scitex/fts/_kinds/_table/_latex/_export.py +0 -279
- scitex/fts/_stats/__init__.py +0 -48
- scitex/fts/_stats/_dataclasses/_Stats.py +0 -423
- scitex/fts/_stats/_dataclasses/__init__.py +0 -48
- scitex/fts/_tables/__init__.py +0 -65
- scitex/fts/_tables/_latex/__init__.py +0 -93
- scitex/fts/_tables/_latex/_editor/__init__.py +0 -11
- scitex/fts/_tables/_latex/_editor/_app.py +0 -725
- scitex/fts/_tables/_latex/_figure_exporter.py +0 -153
- scitex/fts/_tables/_latex/_stats_formatter.py +0 -274
- scitex/fts/_tables/_latex/_table_exporter.py +0 -362
- scitex/fts/_tables/_latex/_utils.py +0 -369
- scitex/fts/_tables/_latex/_validator.py +0 -445
- scitex/io/_save_modules/_pltz_bundle.py +0 -356
- /scitex/{fig → canvas}/README.md +0 -0
- /scitex/{fig → canvas}/backend/__init__.py +0 -0
- /scitex/{fig → canvas}/backend/_export.py +0 -0
- /scitex/{fig → canvas}/backend/_render.py +0 -0
- /scitex/{fig → canvas}/docs/CANVAS_ARCHITECTURE.md +0 -0
- /scitex/{fig → canvas}/editor/__init__.py +0 -0
- /scitex/{fig → canvas}/editor/_dearpygui_editor.py +0 -0
- /scitex/{fig → canvas}/editor/_flask_editor.py +0 -0
- /scitex/{fig → canvas}/editor/_mpl_editor.py +0 -0
- /scitex/{fig → canvas}/editor/_qt_editor.py +0 -0
- /scitex/{fig → canvas}/editor/_tkinter_editor.py +0 -0
- /scitex/{fig → canvas}/editor/edit/backend_detector.py +0 -0
- /scitex/{fig → canvas}/editor/edit/manual_handler.py +0 -0
- /scitex/{fig → canvas}/editor/edit/path_resolver.py +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/__init__.py +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/_plotter.py +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/_utils.py +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/base/reset.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/base/typography.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/base/variables.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/components/buttons.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/components/context-menu.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/components/dropdown.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/components/forms.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/components/modal.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/components/sections.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/features/element-inspector.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/features/loading.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/features/overlay.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/features/selection.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/features/statistics.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/index.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/layout/container.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/layout/controls.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/css/layout/preview.css +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/alignment/axis.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/alignment/basic.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/alignment/distribute.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/canvas/canvas.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/canvas/dragging.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/canvas/resize.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/canvas/selection.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/core/state.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/core/utils.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/dev/element-inspector.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/editor/bbox.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/editor/element-drag.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/editor/overlay.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/main.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/shortcuts/context-menu.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/shortcuts/keyboard.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/ui/controls.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/ui/download.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/ui/help.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/static/js/ui/theme.js +0 -0
- /scitex/{fig → canvas}/editor/flask_editor/templates/__init__.py +0 -0
- /scitex/{fig → canvas}/io/_directory.py +0 -0
- /scitex/{fig → canvas}/model/_plot_types.py +0 -0
- /scitex/{fig → canvas}/utils/_defaults.py +0 -0
- /scitex/{fig → canvas}/utils/_validate.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_conversion/__init__.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_conversion/_bundle2dict.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_conversion/_dict2bundle.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_dataclasses/_Axes.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_dataclasses/_BBox.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_dataclasses/_ColumnDef.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_dataclasses/_DataFormat.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_dataclasses/_DataInfo.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_dataclasses/_DataSource.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_dataclasses/_SizeMM.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_extractors/__init__.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_extractors/_extract_bar.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_extractors/_extract_line.py +0 -0
- /scitex/{fts/_bundle → io/bundle}/_extractors/_extract_scatter.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/__init__.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_figure/__init__.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_figure}/_composite.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_plot/__init__.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_backend/__init__.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_backend/_export.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_backend/_render.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_dataclasses/_ChannelEncoding.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_dataclasses/_Encoding.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_dataclasses/_Theme.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_dataclasses/_TraceEncoding.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_dataclasses/__init__.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/__init__.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/__init__.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_bar.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_box.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_distribution.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_errorbar.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_histogram.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_image.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_line.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_scatter.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_seaborn.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_models/_plot_types/_violin.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_utils/__init__.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_utils/_auto_layout.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_utils/_calc_bounds.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_utils/_const_sizes.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_utils/_convert_coords.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_utils/_get_template.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_utils/_normalize.py +0 -0
- /scitex/{fts/_fig → io/bundle/kinds/_plot}/_utils/_validate.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_shape/__init__.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_stats/__init__.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_stats/_dataclasses/_Stats.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_stats/_dataclasses/__init__.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_table/__init__.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_table/_latex/_editor/__init__.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_table/_latex/_stats_formatter.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_table/_latex/_utils.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_table/_latex/_validator.py +0 -0
- /scitex/{fts/_kinds → io/bundle/kinds}/_text/__init__.py +0 -0
- /scitex/{fts/_schemas → io/bundle/schemas}/data_info.schema.json +0 -0
- /scitex/{fts/_schemas → io/bundle/schemas}/encoding.schema.json +0 -0
- /scitex/{fts/_schemas → io/bundle/schemas}/node.schema.json +0 -0
- /scitex/{fts/_schemas → io/bundle/schemas}/render_manifest.schema.json +0 -0
- /scitex/{fts/_schemas → io/bundle/schemas}/stats.schema.json +0 -0
- /scitex/{fts/_schemas → io/bundle/schemas}/theme.schema.json +0 -0
- {scitex-2.10.3.dist-info → scitex-2.11.0.dist-info}/WHEEL +0 -0
- {scitex-2.10.3.dist-info → scitex-2.11.0.dist-info}/entry_points.txt +0 -0
- {scitex-2.10.3.dist-info → scitex-2.11.0.dist-info}/licenses/LICENSE +0 -0
|
@@ -1,664 +0,0 @@
|
|
|
1
|
-
#!/usr/bin/env python3
|
|
2
|
-
# File: ./src/scitex/vis/editor/flask_editor/plotter.py
|
|
3
|
-
"""CSV plotting functionality for Flask editor."""
|
|
4
|
-
|
|
5
|
-
from typing import Any, Dict, Optional
|
|
6
|
-
|
|
7
|
-
import numpy as np
|
|
8
|
-
import pandas as pd
|
|
9
|
-
|
|
10
|
-
|
|
11
|
-
def _apply_element_overrides(
|
|
12
|
-
kwargs: Dict[str, Any],
|
|
13
|
-
element_key: str,
|
|
14
|
-
element_overrides: Dict[str, Any],
|
|
15
|
-
element_type: str,
|
|
16
|
-
) -> Dict[str, Any]:
|
|
17
|
-
"""Apply element-specific overrides to kwargs.
|
|
18
|
-
|
|
19
|
-
Args:
|
|
20
|
-
kwargs: Original kwargs dict
|
|
21
|
-
element_key: Key to look up in element_overrides (e.g., 'ax_00_scatter_0')
|
|
22
|
-
element_overrides: Dict mapping element keys to their override values
|
|
23
|
-
element_type: Type of element ('trace', 'scatter', 'fill', 'bar')
|
|
24
|
-
|
|
25
|
-
Returns:
|
|
26
|
-
Updated kwargs dict with overrides applied
|
|
27
|
-
"""
|
|
28
|
-
if not element_key or element_key not in element_overrides:
|
|
29
|
-
return kwargs
|
|
30
|
-
|
|
31
|
-
overrides = element_overrides[element_key]
|
|
32
|
-
result = kwargs.copy()
|
|
33
|
-
|
|
34
|
-
if element_type == "trace":
|
|
35
|
-
# Line/trace overrides: color, linewidth, linestyle, marker, markersize, alpha
|
|
36
|
-
if "color" in overrides:
|
|
37
|
-
result["color"] = overrides["color"]
|
|
38
|
-
if "linewidth" in overrides:
|
|
39
|
-
result["linewidth"] = overrides["linewidth"]
|
|
40
|
-
if "linestyle" in overrides:
|
|
41
|
-
result["linestyle"] = overrides["linestyle"]
|
|
42
|
-
if "marker" in overrides and overrides["marker"]:
|
|
43
|
-
result["marker"] = overrides["marker"]
|
|
44
|
-
if "markersize" in overrides:
|
|
45
|
-
result["markersize"] = overrides["markersize"]
|
|
46
|
-
if "alpha" in overrides:
|
|
47
|
-
result["alpha"] = overrides["alpha"]
|
|
48
|
-
if "label" in overrides and overrides["label"]:
|
|
49
|
-
result["label"] = overrides["label"]
|
|
50
|
-
|
|
51
|
-
elif element_type == "scatter":
|
|
52
|
-
# Scatter overrides: color (c), size (s), marker, alpha, edgecolor
|
|
53
|
-
if "color" in overrides:
|
|
54
|
-
result["c"] = overrides["color"]
|
|
55
|
-
# Remove facecolors if present (conflicts with c)
|
|
56
|
-
result.pop("facecolors", None)
|
|
57
|
-
if "size" in overrides:
|
|
58
|
-
result["s"] = overrides["size"]
|
|
59
|
-
if "marker" in overrides:
|
|
60
|
-
result["marker"] = overrides["marker"]
|
|
61
|
-
if "alpha" in overrides:
|
|
62
|
-
result["alpha"] = overrides["alpha"]
|
|
63
|
-
if "edgecolor" in overrides:
|
|
64
|
-
result["edgecolors"] = overrides["edgecolor"]
|
|
65
|
-
|
|
66
|
-
elif element_type == "fill":
|
|
67
|
-
# Fill overrides: color, alpha
|
|
68
|
-
if "color" in overrides:
|
|
69
|
-
result["color"] = overrides["color"]
|
|
70
|
-
if "alpha" in overrides:
|
|
71
|
-
result["alpha"] = overrides["alpha"]
|
|
72
|
-
|
|
73
|
-
elif element_type == "bar":
|
|
74
|
-
# Bar overrides: facecolor (color), edgecolor, alpha
|
|
75
|
-
if "facecolor" in overrides:
|
|
76
|
-
result["color"] = overrides["facecolor"]
|
|
77
|
-
if "edgecolor" in overrides:
|
|
78
|
-
result["edgecolor"] = overrides["edgecolor"]
|
|
79
|
-
if "alpha" in overrides:
|
|
80
|
-
result["alpha"] = overrides["alpha"]
|
|
81
|
-
|
|
82
|
-
return result
|
|
83
|
-
|
|
84
|
-
|
|
85
|
-
def plot_from_csv(
|
|
86
|
-
ax,
|
|
87
|
-
csv_data: Optional[pd.DataFrame],
|
|
88
|
-
overrides: Dict[str, Any],
|
|
89
|
-
linewidth: float = 1.0,
|
|
90
|
-
):
|
|
91
|
-
"""Reconstruct plot from CSV data using trace info from overrides.
|
|
92
|
-
|
|
93
|
-
Args:
|
|
94
|
-
ax: Matplotlib axes object
|
|
95
|
-
csv_data: DataFrame containing CSV data
|
|
96
|
-
overrides: Dictionary with override settings including traces
|
|
97
|
-
linewidth: Default line width in points
|
|
98
|
-
"""
|
|
99
|
-
if csv_data is None or not isinstance(csv_data, pd.DataFrame):
|
|
100
|
-
return
|
|
101
|
-
|
|
102
|
-
df = csv_data
|
|
103
|
-
o = overrides
|
|
104
|
-
|
|
105
|
-
# Get legend settings from overrides
|
|
106
|
-
legend_fontsize = o.get("legend_fontsize", 6)
|
|
107
|
-
legend_visible = o.get("legend_visible", True)
|
|
108
|
-
legend_frameon = o.get("legend_frameon", False)
|
|
109
|
-
legend_loc = o.get("legend_loc", "best")
|
|
110
|
-
legend_x = o.get("legend_x", 0.5)
|
|
111
|
-
legend_y = o.get("legend_y", 0.5)
|
|
112
|
-
|
|
113
|
-
# Get traces from overrides (which may have been edited by user)
|
|
114
|
-
traces = o.get("traces", [])
|
|
115
|
-
|
|
116
|
-
if traces:
|
|
117
|
-
_plot_with_traces(
|
|
118
|
-
ax,
|
|
119
|
-
df,
|
|
120
|
-
traces,
|
|
121
|
-
linewidth,
|
|
122
|
-
legend_fontsize,
|
|
123
|
-
legend_visible,
|
|
124
|
-
legend_frameon,
|
|
125
|
-
legend_loc,
|
|
126
|
-
legend_x,
|
|
127
|
-
legend_y,
|
|
128
|
-
)
|
|
129
|
-
else:
|
|
130
|
-
_plot_fallback(
|
|
131
|
-
ax,
|
|
132
|
-
df,
|
|
133
|
-
linewidth,
|
|
134
|
-
legend_fontsize,
|
|
135
|
-
legend_visible,
|
|
136
|
-
legend_frameon,
|
|
137
|
-
legend_loc,
|
|
138
|
-
legend_x,
|
|
139
|
-
legend_y,
|
|
140
|
-
)
|
|
141
|
-
|
|
142
|
-
|
|
143
|
-
def plot_from_recipe(
|
|
144
|
-
ax,
|
|
145
|
-
csv_data: Optional[pd.DataFrame],
|
|
146
|
-
ax_spec: Dict[str, Any],
|
|
147
|
-
overrides: Dict[str, Any],
|
|
148
|
-
linewidth: float = 1.0,
|
|
149
|
-
ax_id: str = "",
|
|
150
|
-
):
|
|
151
|
-
"""Plot from new recipe schema (scitex.plt.figure.recipe).
|
|
152
|
-
|
|
153
|
-
Args:
|
|
154
|
-
ax: Matplotlib axes object
|
|
155
|
-
csv_data: DataFrame containing CSV data
|
|
156
|
-
ax_spec: Axis specification from recipe JSON (includes 'calls' list)
|
|
157
|
-
overrides: Dictionary with override settings
|
|
158
|
-
linewidth: Default line width in points
|
|
159
|
-
ax_id: Axis identifier (e.g., 'ax_00') for element override lookup
|
|
160
|
-
"""
|
|
161
|
-
if csv_data is None or not isinstance(csv_data, pd.DataFrame):
|
|
162
|
-
return
|
|
163
|
-
|
|
164
|
-
df = csv_data
|
|
165
|
-
calls = ax_spec.get("calls", [])
|
|
166
|
-
|
|
167
|
-
# Get element overrides from overrides dict
|
|
168
|
-
element_overrides = overrides.get("element_overrides", {})
|
|
169
|
-
|
|
170
|
-
# Track element indices per type for this axis
|
|
171
|
-
element_counts = {"trace": 0, "scatter": 0, "fill": 0, "bar": 0}
|
|
172
|
-
|
|
173
|
-
for call in calls:
|
|
174
|
-
method = call.get("method", "")
|
|
175
|
-
data_ref = call.get("data_ref", {})
|
|
176
|
-
kwargs = call.get("kwargs", {}).copy() # Copy to avoid modifying original
|
|
177
|
-
call_id = call.get("id", "")
|
|
178
|
-
|
|
179
|
-
# Build element key for override lookup
|
|
180
|
-
element_key = None
|
|
181
|
-
|
|
182
|
-
try:
|
|
183
|
-
if method == "plot":
|
|
184
|
-
element_key = (
|
|
185
|
-
f"{ax_id}_trace_{element_counts['trace']}"
|
|
186
|
-
if ax_id
|
|
187
|
-
else f"trace_{element_counts['trace']}"
|
|
188
|
-
)
|
|
189
|
-
kwargs = _apply_element_overrides(
|
|
190
|
-
kwargs, element_key, element_overrides, "trace"
|
|
191
|
-
)
|
|
192
|
-
_render_plot(ax, df, data_ref, kwargs, linewidth)
|
|
193
|
-
element_counts["trace"] += 1
|
|
194
|
-
elif method == "scatter":
|
|
195
|
-
element_key = (
|
|
196
|
-
f"{ax_id}_scatter_{element_counts['scatter']}"
|
|
197
|
-
if ax_id
|
|
198
|
-
else f"scatter_{element_counts['scatter']}"
|
|
199
|
-
)
|
|
200
|
-
kwargs = _apply_element_overrides(
|
|
201
|
-
kwargs, element_key, element_overrides, "scatter"
|
|
202
|
-
)
|
|
203
|
-
_render_scatter(ax, df, data_ref, kwargs)
|
|
204
|
-
element_counts["scatter"] += 1
|
|
205
|
-
elif method == "bar":
|
|
206
|
-
element_key = (
|
|
207
|
-
f"{ax_id}_bar_{element_counts['bar']}"
|
|
208
|
-
if ax_id
|
|
209
|
-
else f"bar_{element_counts['bar']}"
|
|
210
|
-
)
|
|
211
|
-
kwargs = _apply_element_overrides(
|
|
212
|
-
kwargs, element_key, element_overrides, "bar"
|
|
213
|
-
)
|
|
214
|
-
_render_bar(ax, df, data_ref, kwargs)
|
|
215
|
-
element_counts["bar"] += 1
|
|
216
|
-
elif method == "fill_between":
|
|
217
|
-
element_key = (
|
|
218
|
-
f"{ax_id}_fill_{element_counts['fill']}"
|
|
219
|
-
if ax_id
|
|
220
|
-
else f"fill_{element_counts['fill']}"
|
|
221
|
-
)
|
|
222
|
-
kwargs = _apply_element_overrides(
|
|
223
|
-
kwargs, element_key, element_overrides, "fill"
|
|
224
|
-
)
|
|
225
|
-
_render_fill_between(ax, df, data_ref, kwargs)
|
|
226
|
-
element_counts["fill"] += 1
|
|
227
|
-
elif method == "errorbar":
|
|
228
|
-
_render_errorbar(ax, df, data_ref, kwargs, linewidth)
|
|
229
|
-
elif method == "imshow":
|
|
230
|
-
_render_imshow(ax, df, data_ref, kwargs)
|
|
231
|
-
elif method == "contour":
|
|
232
|
-
_render_contour(ax, df, data_ref, kwargs)
|
|
233
|
-
elif method == "contourf":
|
|
234
|
-
_render_contourf(ax, df, data_ref, kwargs)
|
|
235
|
-
elif method in (
|
|
236
|
-
"stx_shaded_line",
|
|
237
|
-
"stx_fillv",
|
|
238
|
-
"stx_violin",
|
|
239
|
-
"stx_box",
|
|
240
|
-
"stx_rectangle",
|
|
241
|
-
"stx_raster",
|
|
242
|
-
):
|
|
243
|
-
_render_stx_method(ax, df, method, data_ref, kwargs)
|
|
244
|
-
elif method == "hist":
|
|
245
|
-
_render_hist(ax, df, data_ref, kwargs)
|
|
246
|
-
elif method == "text":
|
|
247
|
-
_render_text(ax, df, data_ref, kwargs)
|
|
248
|
-
else:
|
|
249
|
-
# Try generic approach for unknown methods
|
|
250
|
-
_render_generic(ax, df, method, data_ref, kwargs, linewidth)
|
|
251
|
-
except Exception as e:
|
|
252
|
-
print(f"Error rendering {method} for {call_id}: {e}")
|
|
253
|
-
|
|
254
|
-
# Handle legend
|
|
255
|
-
legend_fontsize = overrides.get("legend_fontsize", 6)
|
|
256
|
-
legend_visible = overrides.get("legend_visible", True)
|
|
257
|
-
legend_frameon = overrides.get("legend_frameon", False)
|
|
258
|
-
|
|
259
|
-
if legend_visible:
|
|
260
|
-
handles, labels = ax.get_legend_handles_labels()
|
|
261
|
-
if handles:
|
|
262
|
-
ax.legend(fontsize=legend_fontsize, frameon=legend_frameon)
|
|
263
|
-
|
|
264
|
-
|
|
265
|
-
def _get_column_data(df, col_ref: str) -> Optional[np.ndarray]:
|
|
266
|
-
"""Get column data from DataFrame, handling missing columns gracefully.
|
|
267
|
-
|
|
268
|
-
Handles the naming mismatch between JSON data_ref and CSV columns:
|
|
269
|
-
- JSON: ax-row-0-col-0_trace-id-ax_00_ch1_variable-x
|
|
270
|
-
- CSV: ax-row-0-col-0_trace-id-ch1_variable-x
|
|
271
|
-
"""
|
|
272
|
-
if not col_ref:
|
|
273
|
-
return None
|
|
274
|
-
|
|
275
|
-
# Direct match
|
|
276
|
-
if col_ref in df.columns:
|
|
277
|
-
return df[col_ref].dropna().values
|
|
278
|
-
|
|
279
|
-
# Try removing ax_XX_ prefix from trace-id portion
|
|
280
|
-
# Pattern: ax-row-X-col-Y_trace-id-ax_XX_NAME_variable-Z
|
|
281
|
-
# Should become: ax-row-X-col-Y_trace-id-NAME_variable-Z
|
|
282
|
-
import re
|
|
283
|
-
|
|
284
|
-
simplified = re.sub(r"(trace-id-)ax_\d+_", r"\1", col_ref)
|
|
285
|
-
if simplified in df.columns:
|
|
286
|
-
return df[simplified].dropna().values
|
|
287
|
-
|
|
288
|
-
# Try case variations (lowercase the trace-id part)
|
|
289
|
-
simplified_lower = re.sub(
|
|
290
|
-
r"(trace-id-)[^_]+", lambda m: m.group(0).lower(), simplified
|
|
291
|
-
)
|
|
292
|
-
if simplified_lower in df.columns:
|
|
293
|
-
return df[simplified_lower].dropna().values
|
|
294
|
-
|
|
295
|
-
# Try matching by suffix (variable-x, variable-y, etc.)
|
|
296
|
-
suffix_match = re.search(r"_variable-(\w+)$", col_ref)
|
|
297
|
-
if suffix_match:
|
|
298
|
-
var_suffix = suffix_match.group(0)
|
|
299
|
-
# Extract trace-id pattern
|
|
300
|
-
trace_match = re.search(r"trace-id-(?:ax_\d+_)?([^_]+)", col_ref)
|
|
301
|
-
if trace_match:
|
|
302
|
-
trace_name = trace_match.group(1).lower()
|
|
303
|
-
for col in df.columns:
|
|
304
|
-
if f"trace-id-{trace_name}" in col.lower() and col.endswith(var_suffix):
|
|
305
|
-
return df[col].dropna().values
|
|
306
|
-
|
|
307
|
-
# Last resort: fuzzy match by ending
|
|
308
|
-
for col in df.columns:
|
|
309
|
-
# Match if same variable suffix and similar trace pattern
|
|
310
|
-
if col_ref.split("_variable-")[-1] == col.split("_variable-")[-1]:
|
|
311
|
-
# Check if trace-id portion is similar
|
|
312
|
-
ref_trace = re.search(r"trace-id-(?:ax_\d+_)?(.+?)_variable", col_ref)
|
|
313
|
-
col_trace = re.search(r"trace-id-(.+?)_variable", col)
|
|
314
|
-
if ref_trace and col_trace:
|
|
315
|
-
if ref_trace.group(1).lower() == col_trace.group(1).lower():
|
|
316
|
-
return df[col].dropna().values
|
|
317
|
-
|
|
318
|
-
return None
|
|
319
|
-
|
|
320
|
-
|
|
321
|
-
def _render_plot(ax, df, data_ref, kwargs, linewidth):
|
|
322
|
-
"""Render line plot."""
|
|
323
|
-
x_col = data_ref.get("x", "")
|
|
324
|
-
y_col = data_ref.get("y", "")
|
|
325
|
-
|
|
326
|
-
x = _get_column_data(df, x_col)
|
|
327
|
-
y = _get_column_data(df, y_col)
|
|
328
|
-
|
|
329
|
-
if x is not None and y is not None and len(x) == len(y):
|
|
330
|
-
lw = kwargs.pop("linewidth", linewidth)
|
|
331
|
-
ax.plot(x, y, linewidth=lw, **kwargs)
|
|
332
|
-
|
|
333
|
-
|
|
334
|
-
def _render_scatter(ax, df, data_ref, kwargs):
|
|
335
|
-
"""Render scatter plot."""
|
|
336
|
-
x_col = data_ref.get("x", "")
|
|
337
|
-
y_col = data_ref.get("y", "")
|
|
338
|
-
|
|
339
|
-
x = _get_column_data(df, x_col)
|
|
340
|
-
y = _get_column_data(df, y_col)
|
|
341
|
-
|
|
342
|
-
if x is not None and y is not None and len(x) == len(y):
|
|
343
|
-
ax.scatter(x, y, **kwargs)
|
|
344
|
-
|
|
345
|
-
|
|
346
|
-
def _render_bar(ax, df, data_ref, kwargs):
|
|
347
|
-
"""Render bar plot."""
|
|
348
|
-
x_col = data_ref.get("x", "")
|
|
349
|
-
y_col = data_ref.get("y", "")
|
|
350
|
-
|
|
351
|
-
x = _get_column_data(df, x_col)
|
|
352
|
-
y = _get_column_data(df, y_col)
|
|
353
|
-
|
|
354
|
-
if x is not None and y is not None and len(x) == len(y):
|
|
355
|
-
ax.bar(x, y, **kwargs)
|
|
356
|
-
|
|
357
|
-
|
|
358
|
-
def _render_fill_between(ax, df, data_ref, kwargs):
|
|
359
|
-
"""Render fill_between."""
|
|
360
|
-
x_col = data_ref.get("x", "")
|
|
361
|
-
y1_col = data_ref.get("y1", "")
|
|
362
|
-
y2_col = data_ref.get("y2", "")
|
|
363
|
-
|
|
364
|
-
x = _get_column_data(df, x_col)
|
|
365
|
-
y1 = _get_column_data(df, y1_col)
|
|
366
|
-
y2 = _get_column_data(df, y2_col)
|
|
367
|
-
|
|
368
|
-
if x is not None and y1 is not None and y2 is not None:
|
|
369
|
-
min_len = min(len(x), len(y1), len(y2))
|
|
370
|
-
ax.fill_between(x[:min_len], y1[:min_len], y2[:min_len], **kwargs)
|
|
371
|
-
|
|
372
|
-
|
|
373
|
-
def _render_errorbar(ax, df, data_ref, kwargs, linewidth):
|
|
374
|
-
"""Render errorbar plot."""
|
|
375
|
-
x_col = data_ref.get("x", "")
|
|
376
|
-
y_col = data_ref.get("y", "")
|
|
377
|
-
yerr_col = data_ref.get("yerr", "")
|
|
378
|
-
|
|
379
|
-
x = _get_column_data(df, x_col)
|
|
380
|
-
y = _get_column_data(df, y_col)
|
|
381
|
-
yerr = _get_column_data(df, yerr_col) if yerr_col else None
|
|
382
|
-
|
|
383
|
-
if x is not None and y is not None and len(x) == len(y):
|
|
384
|
-
ax.errorbar(x, y, yerr=yerr, linewidth=linewidth, **kwargs)
|
|
385
|
-
|
|
386
|
-
|
|
387
|
-
def _render_imshow(ax, df, data_ref, kwargs):
|
|
388
|
-
"""Render imshow (heatmap)."""
|
|
389
|
-
data_col = data_ref.get("data", "")
|
|
390
|
-
# For imshow, data is typically in a special format - try to reconstruct
|
|
391
|
-
# Look for row/col/value columns
|
|
392
|
-
row_col = data_ref.get("row", "")
|
|
393
|
-
col_col = data_ref.get("col", "")
|
|
394
|
-
value_col = data_ref.get("value", "")
|
|
395
|
-
|
|
396
|
-
if row_col and col_col and value_col:
|
|
397
|
-
rows = _get_column_data(df, row_col)
|
|
398
|
-
cols = _get_column_data(df, col_col)
|
|
399
|
-
values = _get_column_data(df, value_col)
|
|
400
|
-
|
|
401
|
-
if rows is not None and cols is not None and values is not None:
|
|
402
|
-
# Reconstruct 2D array
|
|
403
|
-
n_rows = int(rows.max()) + 1
|
|
404
|
-
n_cols = int(cols.max()) + 1
|
|
405
|
-
data = np.zeros((n_rows, n_cols))
|
|
406
|
-
for r, c, v in zip(rows.astype(int), cols.astype(int), values):
|
|
407
|
-
data[r, c] = v
|
|
408
|
-
ax.imshow(data, **kwargs)
|
|
409
|
-
|
|
410
|
-
|
|
411
|
-
def _render_contour(ax, df, data_ref, kwargs):
|
|
412
|
-
"""Render contour plot."""
|
|
413
|
-
x_col = data_ref.get("x", "")
|
|
414
|
-
y_col = data_ref.get("y", "")
|
|
415
|
-
z_col = data_ref.get("z", "")
|
|
416
|
-
|
|
417
|
-
x = _get_column_data(df, x_col)
|
|
418
|
-
y = _get_column_data(df, y_col)
|
|
419
|
-
z = _get_column_data(df, z_col)
|
|
420
|
-
|
|
421
|
-
if x is not None and y is not None and z is not None:
|
|
422
|
-
# Assume data is on a grid - reconstruct
|
|
423
|
-
n = int(np.sqrt(len(x)))
|
|
424
|
-
if n * n == len(x):
|
|
425
|
-
X = x.reshape(n, n)
|
|
426
|
-
Y = y.reshape(n, n)
|
|
427
|
-
Z = z.reshape(n, n)
|
|
428
|
-
ax.contour(X, Y, Z, **kwargs)
|
|
429
|
-
|
|
430
|
-
|
|
431
|
-
def _render_contourf(ax, df, data_ref, kwargs):
|
|
432
|
-
"""Render filled contour plot."""
|
|
433
|
-
x_col = data_ref.get("x", "")
|
|
434
|
-
y_col = data_ref.get("y", "")
|
|
435
|
-
z_col = data_ref.get("z", "")
|
|
436
|
-
|
|
437
|
-
x = _get_column_data(df, x_col)
|
|
438
|
-
y = _get_column_data(df, y_col)
|
|
439
|
-
z = _get_column_data(df, z_col)
|
|
440
|
-
|
|
441
|
-
if x is not None and y is not None and z is not None:
|
|
442
|
-
# Assume data is on a grid - reconstruct
|
|
443
|
-
n = int(np.sqrt(len(x)))
|
|
444
|
-
if n * n == len(x):
|
|
445
|
-
X = x.reshape(n, n)
|
|
446
|
-
Y = y.reshape(n, n)
|
|
447
|
-
Z = z.reshape(n, n)
|
|
448
|
-
ax.contourf(X, Y, Z, **kwargs)
|
|
449
|
-
|
|
450
|
-
|
|
451
|
-
def _render_stx_method(ax, df, method, data_ref, kwargs):
|
|
452
|
-
"""Render scitex-specific methods (shaded_line, fillv, etc.)."""
|
|
453
|
-
# These are custom methods - for now, skip or implement basic versions
|
|
454
|
-
if method == "stx_shaded_line":
|
|
455
|
-
x_col = data_ref.get("x", "")
|
|
456
|
-
y_lower_col = data_ref.get("y_lower", "")
|
|
457
|
-
y_middle_col = data_ref.get("y_middle", "")
|
|
458
|
-
y_upper_col = data_ref.get("y_upper", "")
|
|
459
|
-
|
|
460
|
-
x = _get_column_data(df, x_col)
|
|
461
|
-
y_lower = _get_column_data(df, y_lower_col)
|
|
462
|
-
y_middle = _get_column_data(df, y_middle_col)
|
|
463
|
-
y_upper = _get_column_data(df, y_upper_col)
|
|
464
|
-
|
|
465
|
-
if all(v is not None for v in [x, y_lower, y_middle, y_upper]):
|
|
466
|
-
min_len = min(len(x), len(y_lower), len(y_middle), len(y_upper))
|
|
467
|
-
ax.fill_between(
|
|
468
|
-
x[:min_len],
|
|
469
|
-
y_lower[:min_len],
|
|
470
|
-
y_upper[:min_len],
|
|
471
|
-
alpha=0.3,
|
|
472
|
-
**{k: v for k, v in kwargs.items() if k not in ["linewidth"]},
|
|
473
|
-
)
|
|
474
|
-
ax.plot(x[:min_len], y_middle[:min_len], **kwargs)
|
|
475
|
-
|
|
476
|
-
|
|
477
|
-
def _render_hist(ax, df, data_ref, kwargs):
|
|
478
|
-
"""Render histogram."""
|
|
479
|
-
data_col = data_ref.get("data", data_ref.get("x", ""))
|
|
480
|
-
data = _get_column_data(df, data_col)
|
|
481
|
-
if data is not None:
|
|
482
|
-
ax.hist(data, **kwargs)
|
|
483
|
-
|
|
484
|
-
|
|
485
|
-
def _render_text(ax, df, data_ref, kwargs):
|
|
486
|
-
"""Render text annotation."""
|
|
487
|
-
x_col = data_ref.get("x", "")
|
|
488
|
-
y_col = data_ref.get("y", "")
|
|
489
|
-
content_col = data_ref.get("content", "")
|
|
490
|
-
|
|
491
|
-
x = _get_column_data(df, x_col)
|
|
492
|
-
y = _get_column_data(df, y_col)
|
|
493
|
-
|
|
494
|
-
if x is not None and y is not None and len(x) > 0:
|
|
495
|
-
# Get text content from CSV or kwargs
|
|
496
|
-
text = kwargs.pop("text", "")
|
|
497
|
-
if not text and content_col:
|
|
498
|
-
content = _get_column_data(df, content_col)
|
|
499
|
-
if content is not None and len(content) > 0:
|
|
500
|
-
text = str(content[0])
|
|
501
|
-
ax.text(x[0], y[0], text, **kwargs)
|
|
502
|
-
|
|
503
|
-
|
|
504
|
-
def _render_generic(ax, df, method, data_ref, kwargs, linewidth):
|
|
505
|
-
"""Try to render using generic approach."""
|
|
506
|
-
# For unknown methods, try to get x/y data and plot as line
|
|
507
|
-
x_col = data_ref.get("x", "")
|
|
508
|
-
y_col = data_ref.get("y", "")
|
|
509
|
-
|
|
510
|
-
x = _get_column_data(df, x_col)
|
|
511
|
-
y = _get_column_data(df, y_col)
|
|
512
|
-
|
|
513
|
-
if x is not None and y is not None and len(x) == len(y):
|
|
514
|
-
# Filter out kwargs that are not valid for ax.plot()
|
|
515
|
-
invalid_plot_kwargs = {
|
|
516
|
-
"levels",
|
|
517
|
-
"extend",
|
|
518
|
-
"origin",
|
|
519
|
-
"extent",
|
|
520
|
-
"aspect",
|
|
521
|
-
"norm",
|
|
522
|
-
"vmin",
|
|
523
|
-
"vmax",
|
|
524
|
-
"interpolation",
|
|
525
|
-
"filternorm",
|
|
526
|
-
"filterrad",
|
|
527
|
-
"resample",
|
|
528
|
-
"bins",
|
|
529
|
-
"range",
|
|
530
|
-
"density",
|
|
531
|
-
"weights",
|
|
532
|
-
"cumulative",
|
|
533
|
-
"bottom",
|
|
534
|
-
"histtype",
|
|
535
|
-
"align",
|
|
536
|
-
"orientation",
|
|
537
|
-
"rwidth",
|
|
538
|
-
"log",
|
|
539
|
-
"stacked",
|
|
540
|
-
"data",
|
|
541
|
-
"width",
|
|
542
|
-
"height",
|
|
543
|
-
"edgecolors",
|
|
544
|
-
"s",
|
|
545
|
-
"c",
|
|
546
|
-
"facecolors",
|
|
547
|
-
}
|
|
548
|
-
filtered_kwargs = {
|
|
549
|
-
k: v for k, v in kwargs.items() if k not in invalid_plot_kwargs
|
|
550
|
-
}
|
|
551
|
-
ax.plot(x, y, linewidth=linewidth, **filtered_kwargs)
|
|
552
|
-
|
|
553
|
-
|
|
554
|
-
def _plot_with_traces(
|
|
555
|
-
ax,
|
|
556
|
-
df,
|
|
557
|
-
traces,
|
|
558
|
-
linewidth,
|
|
559
|
-
legend_fontsize,
|
|
560
|
-
legend_visible,
|
|
561
|
-
legend_frameon,
|
|
562
|
-
legend_loc,
|
|
563
|
-
legend_x,
|
|
564
|
-
legend_y,
|
|
565
|
-
):
|
|
566
|
-
"""Plot using trace information from overrides."""
|
|
567
|
-
for trace in traces:
|
|
568
|
-
# Support both old format (csv_columns.x/y) and new format (x_col/y_col)
|
|
569
|
-
csv_cols = trace.get("csv_columns", {})
|
|
570
|
-
x_col = csv_cols.get("x") or trace.get("x_col")
|
|
571
|
-
y_col = csv_cols.get("y") or trace.get("y_col")
|
|
572
|
-
|
|
573
|
-
if x_col and y_col and x_col in df.columns and y_col in df.columns:
|
|
574
|
-
ax.plot(
|
|
575
|
-
df[x_col],
|
|
576
|
-
df[y_col],
|
|
577
|
-
label=trace.get("label", trace.get("id", "")),
|
|
578
|
-
color=trace.get("color"),
|
|
579
|
-
linestyle=trace.get("linestyle", "-"),
|
|
580
|
-
linewidth=trace.get("linewidth", linewidth),
|
|
581
|
-
marker=trace.get("marker", None),
|
|
582
|
-
markersize=trace.get("markersize", 6),
|
|
583
|
-
)
|
|
584
|
-
|
|
585
|
-
# Add legend if there are labeled traces
|
|
586
|
-
if legend_visible and any(t.get("label") for t in traces):
|
|
587
|
-
_add_legend(ax, legend_fontsize, legend_frameon, legend_loc, legend_x, legend_y)
|
|
588
|
-
|
|
589
|
-
|
|
590
|
-
def _plot_fallback(
|
|
591
|
-
ax,
|
|
592
|
-
df,
|
|
593
|
-
linewidth,
|
|
594
|
-
legend_fontsize,
|
|
595
|
-
legend_visible,
|
|
596
|
-
legend_frameon,
|
|
597
|
-
legend_loc,
|
|
598
|
-
legend_x,
|
|
599
|
-
legend_y,
|
|
600
|
-
):
|
|
601
|
-
"""Fallback plotting when no trace info available - smart parsing of column names."""
|
|
602
|
-
cols = df.columns.tolist()
|
|
603
|
-
|
|
604
|
-
# Group columns by trace ID
|
|
605
|
-
trace_groups = {}
|
|
606
|
-
for col in cols:
|
|
607
|
-
if col.endswith("_x"):
|
|
608
|
-
trace_id = col[:-2] # Remove '_x'
|
|
609
|
-
y_col = trace_id + "_y"
|
|
610
|
-
if y_col in cols:
|
|
611
|
-
# Extract label from column name (e.g., ax_00_sine_plot -> sine)
|
|
612
|
-
parts = trace_id.split("_")
|
|
613
|
-
label = parts[2] if len(parts) > 2 else trace_id
|
|
614
|
-
trace_groups[trace_id] = {
|
|
615
|
-
"x_col": col,
|
|
616
|
-
"y_col": y_col,
|
|
617
|
-
"label": label,
|
|
618
|
-
}
|
|
619
|
-
|
|
620
|
-
if trace_groups:
|
|
621
|
-
for trace_id, info in trace_groups.items():
|
|
622
|
-
ax.plot(
|
|
623
|
-
df[info["x_col"]],
|
|
624
|
-
df[info["y_col"]],
|
|
625
|
-
label=info["label"],
|
|
626
|
-
linewidth=linewidth,
|
|
627
|
-
)
|
|
628
|
-
if legend_visible:
|
|
629
|
-
_add_legend(
|
|
630
|
-
ax, legend_fontsize, legend_frameon, legend_loc, legend_x, legend_y
|
|
631
|
-
)
|
|
632
|
-
|
|
633
|
-
elif len(cols) >= 2:
|
|
634
|
-
# Last resort: assume first column is x, rest are y
|
|
635
|
-
x_col = cols[0]
|
|
636
|
-
for y_col in cols[1:]:
|
|
637
|
-
try:
|
|
638
|
-
ax.plot(df[x_col], df[y_col], label=str(y_col), linewidth=linewidth)
|
|
639
|
-
except Exception:
|
|
640
|
-
pass
|
|
641
|
-
if len(cols) > 2 and legend_visible:
|
|
642
|
-
_add_legend(
|
|
643
|
-
ax, legend_fontsize, legend_frameon, legend_loc, legend_x, legend_y
|
|
644
|
-
)
|
|
645
|
-
|
|
646
|
-
|
|
647
|
-
def _add_legend(ax, fontsize, frameon, loc, x, y):
|
|
648
|
-
"""Add legend to axes with specified settings."""
|
|
649
|
-
if loc == "custom":
|
|
650
|
-
ax.legend(
|
|
651
|
-
fontsize=fontsize,
|
|
652
|
-
frameon=frameon,
|
|
653
|
-
loc="upper left",
|
|
654
|
-
bbox_to_anchor=(x, y),
|
|
655
|
-
)
|
|
656
|
-
else:
|
|
657
|
-
ax.legend(
|
|
658
|
-
fontsize=fontsize,
|
|
659
|
-
frameon=frameon,
|
|
660
|
-
loc=loc,
|
|
661
|
-
)
|
|
662
|
-
|
|
663
|
-
|
|
664
|
-
# EOF
|