scipy 1.15.3__cp312-cp312-win_amd64.whl → 1.16.0rc2__cp312-cp312-win_amd64.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (759) hide show
  1. scipy/__config__.py +8 -8
  2. scipy/__init__.py +3 -6
  3. scipy/_cyutility.cp312-win_amd64.dll.a +0 -0
  4. scipy/_cyutility.cp312-win_amd64.pyd +0 -0
  5. scipy/_lib/_array_api.py +486 -161
  6. scipy/_lib/_array_api_compat_vendor.py +9 -0
  7. scipy/_lib/_bunch.py +4 -0
  8. scipy/_lib/_ccallback_c.cp312-win_amd64.dll.a +0 -0
  9. scipy/_lib/_ccallback_c.cp312-win_amd64.pyd +0 -0
  10. scipy/_lib/_docscrape.py +1 -1
  11. scipy/_lib/_elementwise_iterative_method.py +15 -26
  12. scipy/_lib/_fpumode.cp312-win_amd64.dll.a +0 -0
  13. scipy/_lib/_fpumode.cp312-win_amd64.pyd +0 -0
  14. scipy/_lib/_sparse.py +41 -0
  15. scipy/_lib/_test_ccallback.cp312-win_amd64.dll.a +0 -0
  16. scipy/_lib/_test_ccallback.cp312-win_amd64.pyd +0 -0
  17. scipy/_lib/_test_deprecation_call.cp312-win_amd64.dll.a +0 -0
  18. scipy/_lib/_test_deprecation_call.cp312-win_amd64.pyd +0 -0
  19. scipy/_lib/_test_deprecation_def.cp312-win_amd64.dll.a +0 -0
  20. scipy/_lib/_test_deprecation_def.cp312-win_amd64.pyd +0 -0
  21. scipy/_lib/_testutils.py +6 -2
  22. scipy/_lib/_uarray/_uarray.cp312-win_amd64.dll.a +0 -0
  23. scipy/_lib/_uarray/_uarray.cp312-win_amd64.pyd +0 -0
  24. scipy/_lib/_util.py +222 -125
  25. scipy/_lib/array_api_compat/__init__.py +4 -4
  26. scipy/_lib/array_api_compat/_internal.py +19 -6
  27. scipy/_lib/array_api_compat/common/__init__.py +1 -1
  28. scipy/_lib/array_api_compat/common/_aliases.py +365 -193
  29. scipy/_lib/array_api_compat/common/_fft.py +94 -64
  30. scipy/_lib/array_api_compat/common/_helpers.py +413 -180
  31. scipy/_lib/array_api_compat/common/_linalg.py +116 -40
  32. scipy/_lib/array_api_compat/common/_typing.py +179 -10
  33. scipy/_lib/array_api_compat/cupy/__init__.py +1 -4
  34. scipy/_lib/array_api_compat/cupy/_aliases.py +61 -41
  35. scipy/_lib/array_api_compat/cupy/_info.py +16 -6
  36. scipy/_lib/array_api_compat/cupy/_typing.py +24 -39
  37. scipy/_lib/array_api_compat/dask/array/__init__.py +6 -3
  38. scipy/_lib/array_api_compat/dask/array/_aliases.py +267 -108
  39. scipy/_lib/array_api_compat/dask/array/_info.py +105 -34
  40. scipy/_lib/array_api_compat/dask/array/fft.py +5 -8
  41. scipy/_lib/array_api_compat/dask/array/linalg.py +21 -22
  42. scipy/_lib/array_api_compat/numpy/__init__.py +13 -15
  43. scipy/_lib/array_api_compat/numpy/_aliases.py +98 -49
  44. scipy/_lib/array_api_compat/numpy/_info.py +36 -16
  45. scipy/_lib/array_api_compat/numpy/_typing.py +27 -43
  46. scipy/_lib/array_api_compat/numpy/fft.py +11 -5
  47. scipy/_lib/array_api_compat/numpy/linalg.py +75 -22
  48. scipy/_lib/array_api_compat/torch/__init__.py +3 -5
  49. scipy/_lib/array_api_compat/torch/_aliases.py +262 -159
  50. scipy/_lib/array_api_compat/torch/_info.py +27 -16
  51. scipy/_lib/array_api_compat/torch/_typing.py +3 -0
  52. scipy/_lib/array_api_compat/torch/fft.py +17 -18
  53. scipy/_lib/array_api_compat/torch/linalg.py +16 -16
  54. scipy/_lib/array_api_extra/__init__.py +26 -3
  55. scipy/_lib/array_api_extra/_delegation.py +171 -0
  56. scipy/_lib/array_api_extra/_lib/__init__.py +1 -0
  57. scipy/_lib/array_api_extra/_lib/_at.py +463 -0
  58. scipy/_lib/array_api_extra/_lib/_backends.py +46 -0
  59. scipy/_lib/array_api_extra/_lib/_funcs.py +937 -0
  60. scipy/_lib/array_api_extra/_lib/_lazy.py +357 -0
  61. scipy/_lib/array_api_extra/_lib/_testing.py +278 -0
  62. scipy/_lib/array_api_extra/_lib/_utils/__init__.py +1 -0
  63. scipy/_lib/array_api_extra/_lib/_utils/_compat.py +74 -0
  64. scipy/_lib/array_api_extra/_lib/_utils/_compat.pyi +45 -0
  65. scipy/_lib/array_api_extra/_lib/_utils/_helpers.py +559 -0
  66. scipy/_lib/array_api_extra/_lib/_utils/_typing.py +10 -0
  67. scipy/_lib/array_api_extra/_lib/_utils/_typing.pyi +105 -0
  68. scipy/_lib/array_api_extra/testing.py +359 -0
  69. scipy/_lib/decorator.py +2 -2
  70. scipy/_lib/doccer.py +1 -7
  71. scipy/_lib/messagestream.cp312-win_amd64.dll.a +0 -0
  72. scipy/_lib/messagestream.cp312-win_amd64.pyd +0 -0
  73. scipy/_lib/pyprima/__init__.py +212 -0
  74. scipy/_lib/pyprima/cobyla/__init__.py +0 -0
  75. scipy/_lib/pyprima/cobyla/cobyla.py +559 -0
  76. scipy/_lib/pyprima/cobyla/cobylb.py +714 -0
  77. scipy/_lib/pyprima/cobyla/geometry.py +226 -0
  78. scipy/_lib/pyprima/cobyla/initialize.py +215 -0
  79. scipy/_lib/pyprima/cobyla/trustregion.py +492 -0
  80. scipy/_lib/pyprima/cobyla/update.py +289 -0
  81. scipy/_lib/pyprima/common/__init__.py +0 -0
  82. scipy/_lib/pyprima/common/_bounds.py +34 -0
  83. scipy/_lib/pyprima/common/_linear_constraints.py +46 -0
  84. scipy/_lib/pyprima/common/_nonlinear_constraints.py +54 -0
  85. scipy/_lib/pyprima/common/_project.py +173 -0
  86. scipy/_lib/pyprima/common/checkbreak.py +93 -0
  87. scipy/_lib/pyprima/common/consts.py +47 -0
  88. scipy/_lib/pyprima/common/evaluate.py +99 -0
  89. scipy/_lib/pyprima/common/history.py +38 -0
  90. scipy/_lib/pyprima/common/infos.py +30 -0
  91. scipy/_lib/pyprima/common/linalg.py +435 -0
  92. scipy/_lib/pyprima/common/message.py +290 -0
  93. scipy/_lib/pyprima/common/powalg.py +131 -0
  94. scipy/_lib/pyprima/common/preproc.py +277 -0
  95. scipy/_lib/pyprima/common/present.py +5 -0
  96. scipy/_lib/pyprima/common/ratio.py +54 -0
  97. scipy/_lib/pyprima/common/redrho.py +47 -0
  98. scipy/_lib/pyprima/common/selectx.py +296 -0
  99. scipy/_lib/tests/test__util.py +105 -121
  100. scipy/_lib/tests/test_array_api.py +166 -35
  101. scipy/_lib/tests/test_bunch.py +7 -0
  102. scipy/_lib/tests/test_ccallback.py +2 -10
  103. scipy/_lib/tests/test_public_api.py +13 -0
  104. scipy/cluster/_hierarchy.cp312-win_amd64.dll.a +0 -0
  105. scipy/cluster/_hierarchy.cp312-win_amd64.pyd +0 -0
  106. scipy/cluster/_optimal_leaf_ordering.cp312-win_amd64.dll.a +0 -0
  107. scipy/cluster/_optimal_leaf_ordering.cp312-win_amd64.pyd +0 -0
  108. scipy/cluster/_vq.cp312-win_amd64.dll.a +0 -0
  109. scipy/cluster/_vq.cp312-win_amd64.pyd +0 -0
  110. scipy/cluster/hierarchy.py +393 -223
  111. scipy/cluster/tests/test_hierarchy.py +273 -335
  112. scipy/cluster/tests/test_vq.py +45 -61
  113. scipy/cluster/vq.py +39 -35
  114. scipy/conftest.py +263 -157
  115. scipy/constants/_constants.py +4 -1
  116. scipy/constants/tests/test_codata.py +2 -2
  117. scipy/constants/tests/test_constants.py +11 -18
  118. scipy/datasets/_download_all.py +15 -1
  119. scipy/datasets/_fetchers.py +7 -1
  120. scipy/datasets/_utils.py +1 -1
  121. scipy/differentiate/_differentiate.py +25 -25
  122. scipy/differentiate/tests/test_differentiate.py +24 -25
  123. scipy/fft/_basic.py +20 -0
  124. scipy/fft/_helper.py +3 -34
  125. scipy/fft/_pocketfft/helper.py +29 -1
  126. scipy/fft/_pocketfft/pypocketfft.cp312-win_amd64.dll.a +0 -0
  127. scipy/fft/_pocketfft/pypocketfft.cp312-win_amd64.pyd +0 -0
  128. scipy/fft/_pocketfft/tests/test_basic.py +2 -4
  129. scipy/fft/_pocketfft/tests/test_real_transforms.py +4 -4
  130. scipy/fft/_realtransforms.py +13 -0
  131. scipy/fft/tests/test_basic.py +27 -25
  132. scipy/fft/tests/test_fftlog.py +16 -7
  133. scipy/fft/tests/test_helper.py +18 -34
  134. scipy/fft/tests/test_real_transforms.py +8 -10
  135. scipy/fftpack/convolve.cp312-win_amd64.dll.a +0 -0
  136. scipy/fftpack/convolve.cp312-win_amd64.pyd +0 -0
  137. scipy/fftpack/tests/test_basic.py +2 -4
  138. scipy/fftpack/tests/test_real_transforms.py +8 -9
  139. scipy/integrate/_bvp.py +9 -3
  140. scipy/integrate/_cubature.py +3 -2
  141. scipy/integrate/_dop.cp312-win_amd64.dll.a +0 -0
  142. scipy/integrate/_dop.cp312-win_amd64.pyd +0 -0
  143. scipy/integrate/_lsoda.cp312-win_amd64.dll.a +0 -0
  144. scipy/integrate/_lsoda.cp312-win_amd64.pyd +0 -0
  145. scipy/integrate/_ode.py +9 -2
  146. scipy/integrate/_odepack.cp312-win_amd64.dll.a +0 -0
  147. scipy/integrate/_odepack.cp312-win_amd64.pyd +0 -0
  148. scipy/integrate/_quad_vec.py +21 -29
  149. scipy/integrate/_quadpack.cp312-win_amd64.dll.a +0 -0
  150. scipy/integrate/_quadpack.cp312-win_amd64.pyd +0 -0
  151. scipy/integrate/_quadpack_py.py +11 -7
  152. scipy/integrate/_quadrature.py +3 -3
  153. scipy/integrate/_rules/_base.py +2 -2
  154. scipy/integrate/_tanhsinh.py +48 -47
  155. scipy/integrate/_test_multivariate.cp312-win_amd64.dll.a +0 -0
  156. scipy/integrate/_test_multivariate.cp312-win_amd64.pyd +0 -0
  157. scipy/integrate/_test_odeint_banded.cp312-win_amd64.dll.a +0 -0
  158. scipy/integrate/_test_odeint_banded.cp312-win_amd64.pyd +0 -0
  159. scipy/integrate/_vode.cp312-win_amd64.dll.a +0 -0
  160. scipy/integrate/_vode.cp312-win_amd64.pyd +0 -0
  161. scipy/integrate/tests/test__quad_vec.py +0 -6
  162. scipy/integrate/tests/test_banded_ode_solvers.py +85 -0
  163. scipy/integrate/tests/test_cubature.py +21 -35
  164. scipy/integrate/tests/test_quadrature.py +6 -8
  165. scipy/integrate/tests/test_tanhsinh.py +56 -48
  166. scipy/interpolate/__init__.py +70 -58
  167. scipy/interpolate/_bary_rational.py +22 -22
  168. scipy/interpolate/_bsplines.py +119 -66
  169. scipy/interpolate/_cubic.py +65 -50
  170. scipy/interpolate/_dfitpack.cp312-win_amd64.dll.a +0 -0
  171. scipy/interpolate/_dfitpack.cp312-win_amd64.pyd +0 -0
  172. scipy/interpolate/_dierckx.cp312-win_amd64.dll.a +0 -0
  173. scipy/interpolate/_dierckx.cp312-win_amd64.pyd +0 -0
  174. scipy/interpolate/_fitpack.cp312-win_amd64.dll.a +0 -0
  175. scipy/interpolate/_fitpack.cp312-win_amd64.pyd +0 -0
  176. scipy/interpolate/_fitpack2.py +9 -6
  177. scipy/interpolate/_fitpack_impl.py +32 -26
  178. scipy/interpolate/_fitpack_repro.py +23 -19
  179. scipy/interpolate/_interpnd.cp312-win_amd64.dll.a +0 -0
  180. scipy/interpolate/_interpnd.cp312-win_amd64.pyd +0 -0
  181. scipy/interpolate/_interpolate.py +30 -12
  182. scipy/interpolate/_ndbspline.py +13 -18
  183. scipy/interpolate/_ndgriddata.py +5 -8
  184. scipy/interpolate/_polyint.py +95 -31
  185. scipy/interpolate/_ppoly.cp312-win_amd64.dll.a +0 -0
  186. scipy/interpolate/_ppoly.cp312-win_amd64.pyd +0 -0
  187. scipy/interpolate/_rbf.py +2 -2
  188. scipy/interpolate/_rbfinterp.py +1 -1
  189. scipy/interpolate/_rbfinterp_pythran.cp312-win_amd64.dll.a +0 -0
  190. scipy/interpolate/_rbfinterp_pythran.cp312-win_amd64.pyd +0 -0
  191. scipy/interpolate/_rgi.py +31 -26
  192. scipy/interpolate/_rgi_cython.cp312-win_amd64.dll.a +0 -0
  193. scipy/interpolate/_rgi_cython.cp312-win_amd64.pyd +0 -0
  194. scipy/interpolate/dfitpack.py +0 -20
  195. scipy/interpolate/interpnd.py +1 -2
  196. scipy/interpolate/tests/test_bary_rational.py +2 -2
  197. scipy/interpolate/tests/test_bsplines.py +97 -1
  198. scipy/interpolate/tests/test_fitpack2.py +39 -1
  199. scipy/interpolate/tests/test_interpnd.py +32 -20
  200. scipy/interpolate/tests/test_interpolate.py +48 -4
  201. scipy/interpolate/tests/test_rgi.py +2 -1
  202. scipy/io/_fast_matrix_market/__init__.py +2 -0
  203. scipy/io/_fast_matrix_market/_fmm_core.cp312-win_amd64.dll.a +0 -0
  204. scipy/io/_fast_matrix_market/_fmm_core.cp312-win_amd64.pyd +0 -0
  205. scipy/io/_harwell_boeing/_fortran_format_parser.py +19 -16
  206. scipy/io/_harwell_boeing/hb.py +7 -11
  207. scipy/io/_idl.py +5 -7
  208. scipy/io/_netcdf.py +15 -5
  209. scipy/io/_test_fortran.cp312-win_amd64.dll.a +0 -0
  210. scipy/io/_test_fortran.cp312-win_amd64.pyd +0 -0
  211. scipy/io/arff/tests/test_arffread.py +3 -3
  212. scipy/io/matlab/__init__.py +5 -3
  213. scipy/io/matlab/_mio.py +4 -1
  214. scipy/io/matlab/_mio5.py +19 -13
  215. scipy/io/matlab/_mio5_utils.cp312-win_amd64.dll.a +0 -0
  216. scipy/io/matlab/_mio5_utils.cp312-win_amd64.pyd +0 -0
  217. scipy/io/matlab/_mio_utils.cp312-win_amd64.dll.a +0 -0
  218. scipy/io/matlab/_mio_utils.cp312-win_amd64.pyd +0 -0
  219. scipy/io/matlab/_miobase.py +4 -1
  220. scipy/io/matlab/_streams.cp312-win_amd64.dll.a +0 -0
  221. scipy/io/matlab/_streams.cp312-win_amd64.pyd +0 -0
  222. scipy/io/matlab/tests/test_mio.py +46 -18
  223. scipy/io/matlab/tests/test_mio_funcs.py +1 -1
  224. scipy/io/tests/test_mmio.py +7 -1
  225. scipy/io/tests/test_wavfile.py +41 -0
  226. scipy/io/wavfile.py +57 -10
  227. scipy/linalg/_basic.py +113 -86
  228. scipy/linalg/_cythonized_array_utils.cp312-win_amd64.dll.a +0 -0
  229. scipy/linalg/_cythonized_array_utils.cp312-win_amd64.pyd +0 -0
  230. scipy/linalg/_decomp.py +22 -9
  231. scipy/linalg/_decomp_cholesky.py +28 -13
  232. scipy/linalg/_decomp_cossin.py +45 -30
  233. scipy/linalg/_decomp_interpolative.cp312-win_amd64.dll.a +0 -0
  234. scipy/linalg/_decomp_interpolative.cp312-win_amd64.pyd +0 -0
  235. scipy/linalg/_decomp_ldl.py +4 -1
  236. scipy/linalg/_decomp_lu.py +18 -6
  237. scipy/linalg/_decomp_lu_cython.cp312-win_amd64.dll.a +0 -0
  238. scipy/linalg/_decomp_lu_cython.cp312-win_amd64.pyd +0 -0
  239. scipy/linalg/_decomp_polar.py +2 -0
  240. scipy/linalg/_decomp_qr.py +6 -2
  241. scipy/linalg/_decomp_qz.py +3 -0
  242. scipy/linalg/_decomp_schur.py +3 -1
  243. scipy/linalg/_decomp_svd.py +13 -2
  244. scipy/linalg/_decomp_update.cp312-win_amd64.dll.a +0 -0
  245. scipy/linalg/_decomp_update.cp312-win_amd64.pyd +0 -0
  246. scipy/linalg/_expm_frechet.py +4 -0
  247. scipy/linalg/_fblas.cp312-win_amd64.dll.a +0 -0
  248. scipy/linalg/_fblas.cp312-win_amd64.pyd +0 -0
  249. scipy/linalg/_flapack.cp312-win_amd64.dll.a +0 -0
  250. scipy/linalg/_flapack.cp312-win_amd64.pyd +0 -0
  251. scipy/linalg/_linalg_pythran.cp312-win_amd64.dll.a +0 -0
  252. scipy/linalg/_linalg_pythran.cp312-win_amd64.pyd +0 -0
  253. scipy/linalg/_matfuncs.py +187 -4
  254. scipy/linalg/_matfuncs_expm.cp312-win_amd64.dll.a +0 -0
  255. scipy/linalg/_matfuncs_expm.cp312-win_amd64.pyd +0 -0
  256. scipy/linalg/_matfuncs_schur_sqrtm.cp312-win_amd64.dll.a +0 -0
  257. scipy/linalg/_matfuncs_schur_sqrtm.cp312-win_amd64.pyd +0 -0
  258. scipy/linalg/_matfuncs_sqrtm.py +1 -99
  259. scipy/linalg/_matfuncs_sqrtm_triu.cp312-win_amd64.dll.a +0 -0
  260. scipy/linalg/_matfuncs_sqrtm_triu.cp312-win_amd64.pyd +0 -0
  261. scipy/linalg/_procrustes.py +2 -0
  262. scipy/linalg/_sketches.py +17 -6
  263. scipy/linalg/_solve_toeplitz.cp312-win_amd64.dll.a +0 -0
  264. scipy/linalg/_solve_toeplitz.cp312-win_amd64.pyd +0 -0
  265. scipy/linalg/_solvers.py +7 -2
  266. scipy/linalg/_special_matrices.py +26 -36
  267. scipy/linalg/cython_blas.cp312-win_amd64.dll.a +0 -0
  268. scipy/linalg/cython_blas.cp312-win_amd64.pyd +0 -0
  269. scipy/linalg/cython_lapack.cp312-win_amd64.dll.a +0 -0
  270. scipy/linalg/cython_lapack.cp312-win_amd64.pyd +0 -0
  271. scipy/linalg/lapack.py +22 -2
  272. scipy/linalg/tests/_cython_examples/meson.build +7 -0
  273. scipy/linalg/tests/test_basic.py +31 -16
  274. scipy/linalg/tests/test_batch.py +588 -0
  275. scipy/linalg/tests/test_cythonized_array_utils.py +0 -2
  276. scipy/linalg/tests/test_decomp.py +40 -3
  277. scipy/linalg/tests/test_decomp_cossin.py +14 -0
  278. scipy/linalg/tests/test_decomp_ldl.py +1 -1
  279. scipy/linalg/tests/test_lapack.py +115 -7
  280. scipy/linalg/tests/test_matfuncs.py +157 -102
  281. scipy/linalg/tests/test_procrustes.py +0 -7
  282. scipy/linalg/tests/test_solve_toeplitz.py +1 -1
  283. scipy/linalg/tests/test_special_matrices.py +1 -5
  284. scipy/ndimage/__init__.py +1 -0
  285. scipy/ndimage/_ctest.cp312-win_amd64.dll.a +0 -0
  286. scipy/ndimage/_ctest.cp312-win_amd64.pyd +0 -0
  287. scipy/ndimage/_cytest.cp312-win_amd64.dll.a +0 -0
  288. scipy/ndimage/_cytest.cp312-win_amd64.pyd +0 -0
  289. scipy/ndimage/_delegators.py +8 -2
  290. scipy/ndimage/_filters.py +453 -5
  291. scipy/ndimage/_interpolation.py +36 -6
  292. scipy/ndimage/_measurements.py +4 -2
  293. scipy/ndimage/_morphology.py +5 -0
  294. scipy/ndimage/_nd_image.cp312-win_amd64.dll.a +0 -0
  295. scipy/ndimage/_nd_image.cp312-win_amd64.pyd +0 -0
  296. scipy/ndimage/_ni_docstrings.py +5 -1
  297. scipy/ndimage/_ni_label.cp312-win_amd64.dll.a +0 -0
  298. scipy/ndimage/_ni_label.cp312-win_amd64.pyd +0 -0
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  606. scipy/stats/_ansari_swilk_statistics.cp312-win_amd64.pyd +0 -0
  607. scipy/stats/_axis_nan_policy.py +5 -12
  608. scipy/stats/_biasedurn.cp312-win_amd64.dll.a +0 -0
  609. scipy/stats/_biasedurn.cp312-win_amd64.pyd +0 -0
  610. scipy/stats/_continued_fraction.py +387 -0
  611. scipy/stats/_continuous_distns.py +277 -310
  612. scipy/stats/_correlation.py +1 -1
  613. scipy/stats/_covariance.py +6 -3
  614. scipy/stats/_discrete_distns.py +39 -32
  615. scipy/stats/_distn_infrastructure.py +39 -12
  616. scipy/stats/_distribution_infrastructure.py +900 -238
  617. scipy/stats/_entropy.py +9 -10
  618. scipy/{_lib → stats}/_finite_differences.py +1 -1
  619. scipy/stats/_hypotests.py +83 -50
  620. scipy/stats/_kde.py +53 -49
  621. scipy/stats/_ksstats.py +1 -1
  622. scipy/stats/_levy_stable/__init__.py +7 -15
  623. scipy/stats/_levy_stable/levyst.cp312-win_amd64.dll.a +0 -0
  624. scipy/stats/_levy_stable/levyst.cp312-win_amd64.pyd +0 -0
  625. scipy/stats/_morestats.py +118 -73
  626. scipy/stats/_mstats_basic.py +13 -17
  627. scipy/stats/_mstats_extras.py +8 -8
  628. scipy/stats/_multivariate.py +89 -113
  629. scipy/stats/_new_distributions.py +97 -20
  630. scipy/stats/_page_trend_test.py +12 -5
  631. scipy/stats/_probability_distribution.py +265 -43
  632. scipy/stats/_qmc.py +14 -9
  633. scipy/stats/_qmc_cy.cp312-win_amd64.dll.a +0 -0
  634. scipy/stats/_qmc_cy.cp312-win_amd64.pyd +0 -0
  635. scipy/stats/_qmvnt.py +16 -95
  636. scipy/stats/_qmvnt_cy.cp312-win_amd64.dll.a +0 -0
  637. scipy/stats/_qmvnt_cy.cp312-win_amd64.pyd +0 -0
  638. scipy/stats/_quantile.py +335 -0
  639. scipy/stats/_rcont/rcont.cp312-win_amd64.dll.a +0 -0
  640. scipy/stats/_rcont/rcont.cp312-win_amd64.pyd +0 -0
  641. scipy/stats/_resampling.py +4 -29
  642. scipy/stats/_sampling.py +1 -1
  643. scipy/stats/_sobol.cp312-win_amd64.dll.a +0 -0
  644. scipy/stats/_sobol.cp312-win_amd64.pyd +0 -0
  645. scipy/stats/_stats.cp312-win_amd64.dll.a +0 -0
  646. scipy/stats/_stats.cp312-win_amd64.pyd +0 -0
  647. scipy/stats/_stats_mstats_common.py +21 -2
  648. scipy/stats/_stats_py.py +550 -476
  649. scipy/stats/_stats_pythran.cp312-win_amd64.dll.a +0 -0
  650. scipy/stats/_stats_pythran.cp312-win_amd64.pyd +0 -0
  651. scipy/stats/_unuran/unuran_wrapper.cp312-win_amd64.dll.a +0 -0
  652. scipy/stats/_unuran/unuran_wrapper.cp312-win_amd64.pyd +0 -0
  653. scipy/stats/_unuran/unuran_wrapper.pyi +2 -1
  654. scipy/stats/_variation.py +6 -8
  655. scipy/stats/_wilcoxon.py +13 -7
  656. scipy/stats/tests/common_tests.py +6 -4
  657. scipy/stats/tests/test_axis_nan_policy.py +62 -24
  658. scipy/stats/tests/test_continued_fraction.py +173 -0
  659. scipy/stats/tests/test_continuous.py +379 -60
  660. scipy/stats/tests/test_continuous_basic.py +18 -12
  661. scipy/stats/tests/test_discrete_basic.py +14 -8
  662. scipy/stats/tests/test_discrete_distns.py +16 -16
  663. scipy/stats/tests/test_distributions.py +95 -75
  664. scipy/stats/tests/test_entropy.py +40 -48
  665. scipy/stats/tests/test_fit.py +4 -3
  666. scipy/stats/tests/test_hypotests.py +153 -24
  667. scipy/stats/tests/test_kdeoth.py +109 -41
  668. scipy/stats/tests/test_marray.py +289 -0
  669. scipy/stats/tests/test_morestats.py +79 -47
  670. scipy/stats/tests/test_mstats_basic.py +3 -3
  671. scipy/stats/tests/test_multivariate.py +434 -83
  672. scipy/stats/tests/test_qmc.py +13 -10
  673. scipy/stats/tests/test_quantile.py +199 -0
  674. scipy/stats/tests/test_rank.py +119 -112
  675. scipy/stats/tests/test_resampling.py +47 -56
  676. scipy/stats/tests/test_sampling.py +9 -4
  677. scipy/stats/tests/test_stats.py +799 -939
  678. scipy/stats/tests/test_variation.py +8 -6
  679. scipy/version.py +2 -2
  680. scipy-1.16.0rc2.dist-info/DELVEWHEEL +2 -0
  681. {scipy-1.15.3.dist-info → scipy-1.16.0rc2.dist-info}/LICENSE.txt +4 -4
  682. {scipy-1.15.3.dist-info → scipy-1.16.0rc2.dist-info}/METADATA +11 -11
  683. {scipy-1.15.3.dist-info → scipy-1.16.0rc2.dist-info}/RECORD +685 -693
  684. scipy/_lib/array_api_extra/_funcs.py +0 -484
  685. scipy/_lib/array_api_extra/_typing.py +0 -8
  686. scipy/interpolate/_bspl.cp312-win_amd64.dll.a +0 -0
  687. scipy/interpolate/_bspl.cp312-win_amd64.pyd +0 -0
  688. scipy/optimize/_cobyla.cp312-win_amd64.dll.a +0 -0
  689. scipy/optimize/_cobyla.cp312-win_amd64.pyd +0 -0
  690. scipy/optimize/_cython_nnls.cp312-win_amd64.dll.a +0 -0
  691. scipy/optimize/_cython_nnls.cp312-win_amd64.pyd +0 -0
  692. scipy/optimize/_slsqp.cp312-win_amd64.dll.a +0 -0
  693. scipy/optimize/_slsqp.cp312-win_amd64.pyd +0 -0
  694. scipy/spatial/qhull_src/COPYING.txt +0 -38
  695. scipy/special/libsf_error_state.dll +0 -0
  696. scipy/special/libsf_error_state.dll.a +0 -0
  697. scipy/special/tests/test_log_softmax.py +0 -109
  698. scipy/special/tests/test_xsf_cuda.py +0 -114
  699. scipy/special/xsf/binom.h +0 -89
  700. scipy/special/xsf/cdflib.h +0 -100
  701. scipy/special/xsf/cephes/airy.h +0 -307
  702. scipy/special/xsf/cephes/besselpoly.h +0 -51
  703. scipy/special/xsf/cephes/beta.h +0 -257
  704. scipy/special/xsf/cephes/cbrt.h +0 -131
  705. scipy/special/xsf/cephes/chbevl.h +0 -85
  706. scipy/special/xsf/cephes/chdtr.h +0 -193
  707. scipy/special/xsf/cephes/const.h +0 -87
  708. scipy/special/xsf/cephes/ellie.h +0 -293
  709. scipy/special/xsf/cephes/ellik.h +0 -251
  710. scipy/special/xsf/cephes/ellpe.h +0 -107
  711. scipy/special/xsf/cephes/ellpk.h +0 -117
  712. scipy/special/xsf/cephes/expn.h +0 -260
  713. scipy/special/xsf/cephes/gamma.h +0 -398
  714. scipy/special/xsf/cephes/hyp2f1.h +0 -596
  715. scipy/special/xsf/cephes/hyperg.h +0 -361
  716. scipy/special/xsf/cephes/i0.h +0 -149
  717. scipy/special/xsf/cephes/i1.h +0 -158
  718. scipy/special/xsf/cephes/igam.h +0 -421
  719. scipy/special/xsf/cephes/igam_asymp_coeff.h +0 -195
  720. scipy/special/xsf/cephes/igami.h +0 -313
  721. scipy/special/xsf/cephes/j0.h +0 -225
  722. scipy/special/xsf/cephes/j1.h +0 -198
  723. scipy/special/xsf/cephes/jv.h +0 -715
  724. scipy/special/xsf/cephes/k0.h +0 -164
  725. scipy/special/xsf/cephes/k1.h +0 -163
  726. scipy/special/xsf/cephes/kn.h +0 -243
  727. scipy/special/xsf/cephes/lanczos.h +0 -112
  728. scipy/special/xsf/cephes/ndtr.h +0 -275
  729. scipy/special/xsf/cephes/poch.h +0 -85
  730. scipy/special/xsf/cephes/polevl.h +0 -167
  731. scipy/special/xsf/cephes/psi.h +0 -194
  732. scipy/special/xsf/cephes/rgamma.h +0 -111
  733. scipy/special/xsf/cephes/scipy_iv.h +0 -811
  734. scipy/special/xsf/cephes/shichi.h +0 -248
  735. scipy/special/xsf/cephes/sici.h +0 -224
  736. scipy/special/xsf/cephes/sindg.h +0 -221
  737. scipy/special/xsf/cephes/tandg.h +0 -139
  738. scipy/special/xsf/cephes/trig.h +0 -58
  739. scipy/special/xsf/cephes/unity.h +0 -186
  740. scipy/special/xsf/cephes/zeta.h +0 -172
  741. scipy/special/xsf/config.h +0 -304
  742. scipy/special/xsf/digamma.h +0 -205
  743. scipy/special/xsf/error.h +0 -57
  744. scipy/special/xsf/evalpoly.h +0 -47
  745. scipy/special/xsf/expint.h +0 -266
  746. scipy/special/xsf/hyp2f1.h +0 -694
  747. scipy/special/xsf/iv_ratio.h +0 -173
  748. scipy/special/xsf/lambertw.h +0 -150
  749. scipy/special/xsf/loggamma.h +0 -163
  750. scipy/special/xsf/sici.h +0 -200
  751. scipy/special/xsf/tools.h +0 -427
  752. scipy/special/xsf/trig.h +0 -164
  753. scipy/special/xsf/wright_bessel.h +0 -843
  754. scipy/special/xsf/zlog1.h +0 -35
  755. scipy/stats/_mvn.cp312-win_amd64.dll.a +0 -0
  756. scipy/stats/_mvn.cp312-win_amd64.pyd +0 -0
  757. scipy-1.15.3.dist-info/DELVEWHEEL +0 -2
  758. /scipy-1.15.3-cp312-cp312-win_amd64.whl → /scipy-1.16.0rc2-cp312-cp312-win_amd64.whl +0 -0
  759. {scipy-1.15.3.dist-info → scipy-1.16.0rc2.dist-info}/WHEEL +0 -0
@@ -0,0 +1,588 @@
1
+ import inspect
2
+ import pytest
3
+ import numpy as np
4
+ from numpy.testing import assert_allclose
5
+ from scipy import linalg, sparse
6
+
7
+
8
+ real_floating = [np.float32, np.float64]
9
+ complex_floating = [np.complex64, np.complex128]
10
+ floating = real_floating + complex_floating
11
+
12
+
13
+ def get_random(shape, *, dtype, rng):
14
+ A = rng.random(shape)
15
+ if np.issubdtype(dtype, np.complexfloating):
16
+ A = A + rng.random(shape) * 1j
17
+ return A.astype(dtype)
18
+
19
+ def get_nearly_hermitian(shape, dtype, atol, rng):
20
+ # Generate a batch of nearly Hermitian matrices with specified
21
+ # `shape` and `dtype`. `atol` controls the level of noise in
22
+ # Hermitian-ness to by generated by `rng`.
23
+ A = rng.random(shape).astype(dtype)
24
+ At = np.conj(A.swapaxes(-1, -2))
25
+ noise = rng.standard_normal(size=A.shape).astype(dtype) * atol
26
+ return A + At + noise
27
+
28
+
29
+ class TestBatch:
30
+ # Test batch support for most linalg functions
31
+
32
+ def batch_test(self, fun, arrays, *, core_dim=2, n_out=1, kwargs=None, dtype=None,
33
+ broadcast=True, check_kwargs=True):
34
+ # Check that all outputs of batched call `fun(A, **kwargs)` are the same
35
+ # as if we loop over the separate vectors/matrices in `A`. Also check
36
+ # that `fun` accepts `A` by position or keyword and that results are
37
+ # identical. This is important because the name of the array argument
38
+ # is manually specified to the decorator, and it's easy to mess up.
39
+ # However, this makes it hard to test positional arguments passed
40
+ # after the array, so we test that separately for a few functions to
41
+ # make sure the decorator is working as it should.
42
+
43
+ kwargs = {} if kwargs is None else kwargs
44
+ parameters = list(inspect.signature(fun).parameters.keys())
45
+ arrays = (arrays,) if not isinstance(arrays, tuple) else arrays
46
+
47
+ # Identical results when passing argument by keyword or position
48
+ res2 = fun(*arrays, **kwargs)
49
+ if check_kwargs:
50
+ res1 = fun(**dict(zip(parameters, arrays)), **kwargs)
51
+ for out1, out2 in zip(res1, res2): # even a single array is iterable...
52
+ np.testing.assert_equal(out1, out2)
53
+
54
+ # Check results vs looping over
55
+ res = (res2,) if n_out == 1 else res2
56
+ # This is not the general behavior (only batch dimensions get
57
+ # broadcasted by the decorator) but it's easier for testing.
58
+ if broadcast:
59
+ arrays = np.broadcast_arrays(*arrays)
60
+ batch_shape = arrays[0].shape[:-core_dim]
61
+ for i in range(batch_shape[0]):
62
+ for j in range(batch_shape[1]):
63
+ arrays_ij = (array[i, j] for array in arrays)
64
+ ref = fun(*arrays_ij, **kwargs)
65
+ ref = ((np.asarray(ref),) if n_out == 1 else
66
+ tuple(np.asarray(refk) for refk in ref))
67
+ for k in range(n_out):
68
+ assert_allclose(res[k][i, j], ref[k])
69
+ assert np.shape(res[k][i, j]) == ref[k].shape
70
+
71
+ for k in range(len(ref)):
72
+ out_dtype = ref[k].dtype if dtype is None else dtype
73
+ assert res[k].dtype == out_dtype
74
+
75
+ return res2 # return original, non-tuplized result
76
+
77
+ @pytest.mark.parametrize('dtype', floating)
78
+ def test_expm_cond(self, dtype):
79
+ rng = np.random.default_rng(8342310302941288912051)
80
+ A = rng.random((5, 3, 4, 4)).astype(dtype)
81
+ self.batch_test(linalg.expm_cond, A)
82
+
83
+ @pytest.mark.parametrize('dtype', floating)
84
+ def test_issymmetric(self, dtype):
85
+ rng = np.random.default_rng(8342310302941288912051)
86
+ A = get_nearly_hermitian((5, 3, 4, 4), dtype, 3e-4, rng)
87
+ res = self.batch_test(linalg.issymmetric, A, kwargs=dict(atol=1e-3))
88
+ assert not np.all(res) # ensure test is not trivial: not all True or False;
89
+ assert np.any(res) # also confirms that `atol` is passed to issymmetric
90
+
91
+ @pytest.mark.parametrize('dtype', floating)
92
+ def test_ishermitian(self, dtype):
93
+ rng = np.random.default_rng(8342310302941288912051)
94
+ A = get_nearly_hermitian((5, 3, 4, 4), dtype, 3e-4, rng)
95
+ res = self.batch_test(linalg.ishermitian, A, kwargs=dict(atol=1e-3))
96
+ assert not np.all(res) # ensure test is not trivial: not all True or False;
97
+ assert np.any(res) # also confirms that `atol` is passed to ishermitian
98
+
99
+ @pytest.mark.parametrize('dtype', floating)
100
+ def test_diagsvd(self, dtype):
101
+ rng = np.random.default_rng(8342310302941288912051)
102
+ A = rng.random((5, 3, 4)).astype(dtype)
103
+ res1 = self.batch_test(linalg.diagsvd, A, kwargs=dict(M=6, N=4), core_dim=1)
104
+ # test that `M, N` can be passed by position
105
+ res2 = linalg.diagsvd(A, 6, 4)
106
+ np.testing.assert_equal(res1, res2)
107
+
108
+ @pytest.mark.parametrize('fun', [linalg.inv, linalg.sqrtm, linalg.signm,
109
+ linalg.sinm, linalg.cosm, linalg.tanhm,
110
+ linalg.sinhm, linalg.coshm, linalg.tanhm,
111
+ linalg.pinv, linalg.pinvh, linalg.orth])
112
+ @pytest.mark.parametrize('dtype', floating)
113
+ def test_matmat(self, fun, dtype): # matrix in, matrix out
114
+ rng = np.random.default_rng(8342310302941288912051)
115
+ A = get_random((5, 3, 4, 4), dtype=dtype, rng=rng)
116
+
117
+ # sqrtm can return complex output for real input resulting in i/o type
118
+ # mismatch. Nudge the eigenvalues to positive side to avoid this.
119
+ if fun == linalg.sqrtm:
120
+ A = A + 3*np.eye(4, dtype=dtype)
121
+
122
+ self.batch_test(fun, A)
123
+
124
+ @pytest.mark.parametrize('dtype', floating)
125
+ def test_null_space(self, dtype):
126
+ rng = np.random.default_rng(8342310302941288912051)
127
+ A = get_random((5, 3, 4, 6), dtype=dtype, rng=rng)
128
+ self.batch_test(linalg.null_space, A)
129
+
130
+ @pytest.mark.parametrize('dtype', floating)
131
+ def test_funm(self, dtype):
132
+ rng = np.random.default_rng(8342310302941288912051)
133
+ A = get_random((2, 4, 3, 3), dtype=dtype, rng=rng)
134
+ self.batch_test(linalg.funm, A, kwargs=dict(func=np.sin))
135
+
136
+ @pytest.mark.parametrize('dtype', floating)
137
+ def test_fractional_matrix_power(self, dtype):
138
+ rng = np.random.default_rng(8342310302941288912051)
139
+ A = get_random((2, 4, 3, 3), dtype=dtype, rng=rng)
140
+ res1 = self.batch_test(linalg.fractional_matrix_power, A, kwargs={'t':1.5})
141
+ # test that `t` can be passed by position
142
+ res2 = linalg.fractional_matrix_power(A, 1.5)
143
+ np.testing.assert_equal(res1, res2)
144
+
145
+ @pytest.mark.parametrize('dtype', floating)
146
+ def test_logm(self, dtype):
147
+ # One test failed absolute tolerance with default random seed
148
+ rng = np.random.default_rng(89940026998903887141749720079406074936)
149
+ A = get_random((5, 3, 4, 4), dtype=dtype, rng=rng)
150
+ A = A + 3*np.eye(4) # avoid complex output for real input
151
+ res1 = self.batch_test(linalg.logm, A)
152
+ # test that `disp` can be passed by position
153
+ res2 = linalg.logm(A)
154
+ for res1i, res2i in zip(res1, res2):
155
+ np.testing.assert_equal(res1i, res2i)
156
+
157
+ @pytest.mark.parametrize('dtype', floating)
158
+ def test_pinv(self, dtype):
159
+ rng = np.random.default_rng(8342310302941288912051)
160
+ A = get_random((5, 3, 4, 4), dtype=dtype, rng=rng)
161
+ self.batch_test(linalg.pinv, A, n_out=2, kwargs=dict(return_rank=True))
162
+
163
+ @pytest.mark.parametrize('dtype', floating)
164
+ def test_matrix_balance(self, dtype):
165
+ rng = np.random.default_rng(8342310302941288912051)
166
+ A = get_random((5, 3, 4, 4), dtype=dtype, rng=rng)
167
+ self.batch_test(linalg.matrix_balance, A, n_out=2)
168
+ self.batch_test(linalg.matrix_balance, A, n_out=2, kwargs={'separate':True})
169
+
170
+ @pytest.mark.parametrize('dtype', floating)
171
+ def test_bandwidth(self, dtype):
172
+ rng = np.random.default_rng(8342310302941288912051)
173
+ A = get_random((4, 4), dtype=dtype, rng=rng)
174
+ A = np.asarray([np.triu(A, k) for k in range(-3, 3)]).reshape((2, 3, 4, 4))
175
+ self.batch_test(linalg.bandwidth, A, n_out=2)
176
+
177
+ @pytest.mark.parametrize('fun_n_out', [(linalg.cholesky, 1), (linalg.ldl, 3),
178
+ (linalg.cho_factor, 2)])
179
+ @pytest.mark.parametrize('dtype', floating)
180
+ def test_ldl_cholesky(self, fun_n_out, dtype):
181
+ rng = np.random.default_rng(8342310302941288912051)
182
+ fun, n_out = fun_n_out
183
+ A = get_nearly_hermitian((5, 3, 4, 4), dtype, 0, rng) # exactly Hermitian
184
+ A = A + 4*np.eye(4, dtype=dtype) # ensure positive definite for Cholesky
185
+ self.batch_test(fun, A, n_out=n_out)
186
+
187
+ @pytest.mark.parametrize('compute_uv', [False, True])
188
+ @pytest.mark.parametrize('dtype', floating)
189
+ def test_svd(self, compute_uv, dtype):
190
+ rng = np.random.default_rng(8342310302941288912051)
191
+ A = get_random((5, 3, 2, 4), dtype=dtype, rng=rng)
192
+ n_out = 3 if compute_uv else 1
193
+ self.batch_test(linalg.svd, A, n_out=n_out, kwargs=dict(compute_uv=compute_uv))
194
+
195
+ @pytest.mark.parametrize('fun', [linalg.polar, linalg.qr, linalg.rq])
196
+ @pytest.mark.parametrize('dtype', floating)
197
+ def test_polar_qr_rq(self, fun, dtype):
198
+ rng = np.random.default_rng(8342310302941288912051)
199
+ A = get_random((5, 3, 2, 4), dtype=dtype, rng=rng)
200
+ self.batch_test(fun, A, n_out=2)
201
+
202
+ @pytest.mark.parametrize('cdim', [(5,), (5, 4), (2, 3, 5, 4)])
203
+ @pytest.mark.parametrize('dtype', floating)
204
+ def test_qr_multiply(self, cdim, dtype):
205
+ rng = np.random.default_rng(8342310302941288912051)
206
+ A = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
207
+ c = get_random(cdim, dtype=dtype, rng=rng)
208
+ res = linalg.qr_multiply(A, c, mode='left')
209
+ q, r = linalg.qr(A)
210
+ ref = q @ c
211
+ atol = 1e-6 if dtype in {np.float32, np.complex64} else 1e-12
212
+ assert_allclose(res[0], ref, atol=atol)
213
+ assert_allclose(res[1], r, atol=atol)
214
+
215
+ @pytest.mark.parametrize('uvdim', [[(5,), (3,)], [(4, 5, 2), (4, 3, 2)]])
216
+ @pytest.mark.parametrize('dtype', floating)
217
+ def test_qr_update(self, uvdim, dtype):
218
+ rng = np.random.default_rng(8342310302941288912051)
219
+ udim, vdim = uvdim
220
+ A = get_random((4, 5, 3), dtype=dtype, rng=rng)
221
+ u = get_random(udim, dtype=dtype, rng=rng)
222
+ v = get_random(vdim, dtype=dtype, rng=rng)
223
+ q, r = linalg.qr(A)
224
+ res = linalg.qr_update(q, r, u, v)
225
+ for i in range(4):
226
+ qi, ri = q[i], r[i]
227
+ ui, vi = (u, v) if u.ndim == 1 else (u[i], v[i])
228
+ ref_i = linalg.qr_update(qi, ri, ui, vi)
229
+ assert_allclose(res[0][i], ref_i[0])
230
+ assert_allclose(res[1][i], ref_i[1])
231
+
232
+ @pytest.mark.parametrize('udim', [(5,), (4, 3, 5)])
233
+ @pytest.mark.parametrize('kdim', [(), (4,)])
234
+ @pytest.mark.parametrize('dtype', floating)
235
+ def test_qr_insert(self, udim, kdim, dtype):
236
+ rng = np.random.default_rng(8342310302941288912051)
237
+ A = get_random((4, 5, 5), dtype=dtype, rng=rng)
238
+ u = get_random(udim, dtype=dtype, rng=rng)
239
+ k = rng.integers(0, 5, size=kdim)
240
+ q, r = linalg.qr(A)
241
+ res = linalg.qr_insert(q, r, u, k)
242
+ for i in range(4):
243
+ qi, ri = q[i], r[i]
244
+ ki = k if k.ndim == 0 else k[i]
245
+ ui = u if u.ndim == 1 else u[i]
246
+ ref_i = linalg.qr_insert(qi, ri, ui, ki)
247
+ assert_allclose(res[0][i], ref_i[0])
248
+ assert_allclose(res[1][i], ref_i[1])
249
+
250
+ @pytest.mark.parametrize('kdim', [(), (4,)])
251
+ @pytest.mark.parametrize('dtype', floating)
252
+ def test_qr_delete(self, kdim, dtype):
253
+ rng = np.random.default_rng(8342310302941288912051)
254
+ A = get_random((4, 5, 5), dtype=dtype, rng=rng)
255
+ k = rng.integers(0, 4, size=kdim)
256
+ q, r = linalg.qr(A)
257
+ res = linalg.qr_delete(q, r, k)
258
+ for i in range(4):
259
+ qi, ri = q[i], r[i]
260
+ ki = k if k.ndim == 0 else k[i]
261
+ ref_i = linalg.qr_delete(qi, ri, ki)
262
+ assert_allclose(res[0][i], ref_i[0])
263
+ assert_allclose(res[1][i], ref_i[1])
264
+
265
+ @pytest.mark.parametrize('fun', [linalg.schur, linalg.lu_factor])
266
+ @pytest.mark.parametrize('dtype', floating)
267
+ def test_schur_lu(self, fun, dtype):
268
+ rng = np.random.default_rng(8342310302941288912051)
269
+ A = get_random((5, 3, 4, 4), dtype=dtype, rng=rng)
270
+ self.batch_test(fun, A, n_out=2)
271
+
272
+ @pytest.mark.parametrize('calc_q', [False, True])
273
+ @pytest.mark.parametrize('dtype', floating)
274
+ def test_hessenberg(self, calc_q, dtype):
275
+ rng = np.random.default_rng(8342310302941288912051)
276
+ A = get_random((5, 3, 4, 4), dtype=dtype, rng=rng)
277
+ n_out = 2 if calc_q else 1
278
+ self.batch_test(linalg.hessenberg, A, n_out=n_out, kwargs=dict(calc_q=calc_q))
279
+
280
+ @pytest.mark.parametrize('eigvals_only', [False, True])
281
+ @pytest.mark.parametrize('dtype', floating)
282
+ def test_eig_banded(self, eigvals_only, dtype):
283
+ rng = np.random.default_rng(8342310302941288912051)
284
+ A = get_random((5, 3, 4, 4), dtype=dtype, rng=rng)
285
+ n_out = 1 if eigvals_only else 2
286
+ self.batch_test(linalg.eig_banded, A, n_out=n_out,
287
+ kwargs=dict(eigvals_only=eigvals_only))
288
+
289
+ @pytest.mark.parametrize('dtype', floating)
290
+ def test_eigvals_banded(self, dtype):
291
+ rng = np.random.default_rng(8342310302941288912051)
292
+ A = get_random((5, 3, 4, 4), dtype=dtype, rng=rng)
293
+ self.batch_test(linalg.eigvals_banded, A)
294
+
295
+ @pytest.mark.parametrize('two_in', [False, True])
296
+ @pytest.mark.parametrize('fun_n_nout', [(linalg.eigh, 1), (linalg.eigh, 2),
297
+ (linalg.eigvalsh, 1), (linalg.eigvals, 1)])
298
+ @pytest.mark.parametrize('dtype', floating)
299
+ def test_eigh(self, two_in, fun_n_nout, dtype):
300
+ rng = np.random.default_rng(8342310302941288912051)
301
+ fun, n_out = fun_n_nout
302
+ A = get_nearly_hermitian((1, 3, 4, 4), dtype, 0, rng) # exactly Hermitian
303
+ B = get_nearly_hermitian((2, 1, 4, 4), dtype, 0, rng) # exactly Hermitian
304
+ B = B + 4*np.eye(4).astype(dtype) # needs to be positive definite
305
+ args = (A, B) if two_in else (A,)
306
+ kwargs = dict(eigvals_only=True) if (n_out == 1 and fun==linalg.eigh) else {}
307
+ self.batch_test(fun, args, n_out=n_out, kwargs=kwargs)
308
+
309
+ @pytest.mark.parametrize('compute_expm', [False, True])
310
+ @pytest.mark.parametrize('dtype', floating)
311
+ def test_expm_frechet(self, compute_expm, dtype):
312
+ rng = np.random.default_rng(8342310302941288912051)
313
+ A = get_random((1, 3, 4, 4), dtype=dtype, rng=rng)
314
+ E = get_random((2, 1, 4, 4), dtype=dtype, rng=rng)
315
+ n_out = 2 if compute_expm else 1
316
+ self.batch_test(linalg.expm_frechet, (A, E), n_out=n_out,
317
+ kwargs=dict(compute_expm=compute_expm))
318
+
319
+ @pytest.mark.parametrize('dtype', floating)
320
+ def test_subspace_angles(self, dtype):
321
+ rng = np.random.default_rng(8342310302941288912051)
322
+ A = get_random((1, 3, 4, 3), dtype=dtype, rng=rng)
323
+ B = get_random((2, 1, 4, 3), dtype=dtype, rng=rng)
324
+ self.batch_test(linalg.subspace_angles, (A, B))
325
+ # just to show that A and B don't need to be broadcastable
326
+ M, N, K = 4, 5, 3
327
+ A = get_random((1, 3, M, N), dtype=dtype, rng=rng)
328
+ B = get_random((2, 1, M, K), dtype=dtype, rng=rng)
329
+ assert linalg.subspace_angles(A, B).shape == (2, 3, min(N, K))
330
+
331
+ @pytest.mark.parametrize('fun', [linalg.svdvals])
332
+ @pytest.mark.parametrize('dtype', floating)
333
+ def test_svdvals(self, fun, dtype):
334
+ rng = np.random.default_rng(8342310302941288912051)
335
+ A = get_random((2, 3, 4, 5), dtype=dtype, rng=rng)
336
+ self.batch_test(fun, A)
337
+
338
+ @pytest.mark.parametrize('fun_n_out', [(linalg.orthogonal_procrustes, 2),
339
+ (linalg.khatri_rao, 1),
340
+ (linalg.solve_continuous_lyapunov, 1),
341
+ (linalg.solve_discrete_lyapunov, 1),
342
+ (linalg.qz, 4),
343
+ (linalg.ordqz, 6)])
344
+ @pytest.mark.parametrize('dtype', floating)
345
+ def test_two_generic_matrix_inputs(self, fun_n_out, dtype):
346
+ rng = np.random.default_rng(8342310302941288912051)
347
+ fun, n_out = fun_n_out
348
+ A = get_random((2, 3, 4, 4), dtype=dtype, rng=rng)
349
+ B = get_random((2, 3, 4, 4), dtype=dtype, rng=rng)
350
+ self.batch_test(fun, (A, B), n_out=n_out)
351
+
352
+ @pytest.mark.parametrize('dtype', floating)
353
+ def test_cossin(self, dtype):
354
+ rng = np.random.default_rng(8342310302941288912051)
355
+ p, q = 3, 4
356
+ X = get_random((2, 3, 10, 10), dtype=dtype, rng=rng)
357
+ x11, x12, x21, x22 = (X[..., :p, :q], X[..., :p, q:],
358
+ X[..., p:, :q], X[..., p:, q:])
359
+ res = linalg.cossin(X, p, q)
360
+ ref = linalg.cossin((x11, x12, x21, x22))
361
+ for res_i, ref_i in zip(res, ref):
362
+ np.testing.assert_equal(res_i, ref_i)
363
+
364
+ for j in range(2):
365
+ for k in range(3):
366
+ ref_jk = linalg.cossin(X[j, k], p, q)
367
+ for res_i, ref_ijk in zip(res, ref_jk):
368
+ np.testing.assert_equal(res_i[j, k], ref_ijk)
369
+
370
+ @pytest.mark.parametrize('dtype', floating)
371
+ def test_sylvester(self, dtype):
372
+ rng = np.random.default_rng(8342310302941288912051)
373
+ A = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
374
+ B = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
375
+ C = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
376
+ self.batch_test(linalg.solve_sylvester, (A, B, C))
377
+
378
+ @pytest.mark.parametrize('fun', [linalg.solve_continuous_are,
379
+ linalg.solve_discrete_are])
380
+ @pytest.mark.parametrize('dtype', floating)
381
+ def test_are(self, fun, dtype):
382
+ rng = np.random.default_rng(8342310302941288912051)
383
+ a = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
384
+ b = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
385
+ q = get_nearly_hermitian((2, 3, 5, 5), dtype=dtype, atol=0, rng=rng)
386
+ r = get_nearly_hermitian((2, 3, 5, 5), dtype=dtype, atol=0, rng=rng)
387
+ a = a + 5*np.eye(5) # making these positive definite seems to help
388
+ b = b + 5*np.eye(5)
389
+ q = q + 5*np.eye(5)
390
+ r = r + 5*np.eye(5)
391
+ # can't easily generate valid random e, s
392
+ self.batch_test(fun, (a, b, q, r))
393
+
394
+ @pytest.mark.parametrize('dtype', floating)
395
+ def test_rsf2cs(self, dtype):
396
+ rng = np.random.default_rng(8342310302941288912051)
397
+ A = get_random((2, 3, 4, 4), dtype=dtype, rng=rng)
398
+ T, Z = linalg.schur(A)
399
+ self.batch_test(linalg.rsf2csf, (T, Z), n_out=2)
400
+
401
+ @pytest.mark.parametrize('dtype', floating)
402
+ def test_cholesky_banded(self, dtype):
403
+ rng = np.random.default_rng(8342310302941288912051)
404
+ ab = get_random((5, 4, 3, 6), dtype=dtype, rng=rng)
405
+ ab[..., -1, :] = 10 # make diagonal dominant
406
+ self.batch_test(linalg.cholesky_banded, ab)
407
+
408
+ @pytest.mark.parametrize('dtype', floating)
409
+ def test_block_diag(self, dtype):
410
+ rng = np.random.default_rng(8342310302941288912051)
411
+ a = get_random((1, 3, 1, 3), dtype=dtype, rng=rng)
412
+ b = get_random((2, 1, 3, 6), dtype=dtype, rng=rng)
413
+ c = get_random((1, 1, 3, 2), dtype=dtype, rng=rng)
414
+
415
+ # batch_test doesn't have the logic to broadcast just the batch shapes,
416
+ # so do it manually.
417
+ a2 = np.broadcast_to(a, (2, 3, 1, 3))
418
+ b2 = np.broadcast_to(b, (2, 3, 3, 6))
419
+ c2 = np.broadcast_to(c, (2, 3, 3, 2))
420
+ ref = self.batch_test(linalg.block_diag, (a2, b2, c2),
421
+ check_kwargs=False, broadcast=False)
422
+
423
+ # Check that `block_diag` broadcasts the batch shapes as expected.
424
+ res = linalg.block_diag(a, b, c)
425
+ assert_allclose(res, ref)
426
+
427
+ @pytest.mark.parametrize('fun_n_out', [(linalg.eigh_tridiagonal, 2),
428
+ (linalg.eigvalsh_tridiagonal, 1)])
429
+ @pytest.mark.parametrize('dtype', real_floating)
430
+ # "Only real arrays currently supported"
431
+ def test_eigh_tridiagonal(self, fun_n_out, dtype):
432
+ rng = np.random.default_rng(8342310302941288912051)
433
+ fun, n_out = fun_n_out
434
+ d = get_random((3, 4, 5), dtype=dtype, rng=rng)
435
+ e = get_random((3, 4, 4), dtype=dtype, rng=rng)
436
+ self.batch_test(fun, (d, e), core_dim=1, n_out=n_out, broadcast=False)
437
+
438
+ @pytest.mark.parametrize('bdim', [(5,), (5, 4), (2, 3, 5, 4)])
439
+ @pytest.mark.parametrize('dtype', floating)
440
+ def test_solve(self, bdim, dtype):
441
+ rng = np.random.default_rng(8342310302941288912051)
442
+ A = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
443
+ b = get_random(bdim, dtype=dtype, rng=rng)
444
+ x = linalg.solve(A, b)
445
+ if len(bdim) == 1:
446
+ x = x[..., np.newaxis]
447
+ b = b[..., np.newaxis]
448
+ assert_allclose(A @ x - b, 0, atol=1.5e-6)
449
+ assert_allclose(x, np.linalg.solve(A, b), atol=3e-6)
450
+
451
+ @pytest.mark.parametrize('bdim', [(5,), (5, 4), (2, 3, 5, 4)])
452
+ @pytest.mark.parametrize('dtype', floating)
453
+ def test_lu_solve(self, bdim, dtype):
454
+ rng = np.random.default_rng(8342310302941288912051)
455
+ A = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
456
+ b = get_random(bdim, dtype=dtype, rng=rng)
457
+ lu_and_piv = linalg.lu_factor(A)
458
+ x = linalg.lu_solve(lu_and_piv, b)
459
+ if len(bdim) == 1:
460
+ x = x[..., np.newaxis]
461
+ b = b[..., np.newaxis]
462
+ assert_allclose(A @ x - b, 0, atol=1.5e-6)
463
+ assert_allclose(x, np.linalg.solve(A, b), atol=3e-6)
464
+
465
+ @pytest.mark.parametrize('l_and_u', [(1, 1), ([2, 1, 0], [0, 1 , 2])])
466
+ @pytest.mark.parametrize('bdim', [(5,), (5, 4), (2, 3, 5, 4)])
467
+ @pytest.mark.parametrize('dtype', floating)
468
+ def test_solve_banded(self, l_and_u, bdim, dtype):
469
+ rng = np.random.default_rng(8342310302941288912051)
470
+ l, u = l_and_u
471
+ ab = get_random((2, 3, 3, 5), dtype=dtype, rng=rng)
472
+ b = get_random(bdim, dtype=dtype, rng=rng)
473
+ x = linalg.solve_banded((l, u), ab, b)
474
+ for i in range(2):
475
+ for j in range(3):
476
+ bij = b if len(bdim) <= 2 else b[i, j]
477
+ lj = l if np.ndim(l) == 0 else l[j]
478
+ uj = u if np.ndim(u) == 0 else u[j]
479
+ xij = linalg.solve_banded((lj, uj), ab[i, j], bij)
480
+ assert_allclose(x[i, j], xij)
481
+
482
+ # Can uncomment when `solve_toeplitz` deprecation is done (SciPy 1.17)
483
+ # @pytest.mark.parametrize('separate_r', [False, True])
484
+ # @pytest.mark.parametrize('bdim', [(5,), (5, 4), (2, 3, 5, 4)])
485
+ # @pytest.mark.parametrize('dtype', floating)
486
+ # def test_solve_toeplitz(self, separate_r, bdim, dtype):
487
+ # rng = np.random.default_rng(8342310302941288912051)
488
+ # c = get_random((2, 3, 5), dtype=dtype, rng=rng)
489
+ # r = get_random((2, 3, 5), dtype=dtype, rng=rng)
490
+ # c_or_cr = (c, r) if separate_r else c
491
+ # b = get_random(bdim, dtype=dtype, rng=rng)
492
+ # x = linalg.solve_toeplitz(c_or_cr, b)
493
+ # for i in range(2):
494
+ # for j in range(3):
495
+ # bij = b if len(bdim) <= 2 else b[i, j]
496
+ # c_or_cr_ij = (c[i, j], r[i, j]) if separate_r else c[i, j]
497
+ # xij = linalg.solve_toeplitz(c_or_cr_ij, bij)
498
+ # assert_allclose(x[i, j], xij)
499
+
500
+ @pytest.mark.parametrize('bdim', [(5,), (5, 4), (2, 3, 5, 4)])
501
+ @pytest.mark.parametrize('dtype', floating)
502
+ def test_cho_solve(self, bdim, dtype):
503
+ rng = np.random.default_rng(8342310302941288912051)
504
+ A = get_nearly_hermitian((2, 3, 5, 5), dtype=dtype, atol=0, rng=rng)
505
+ A = A + 5*np.eye(5)
506
+ c_and_lower = linalg.cho_factor(A)
507
+ b = get_random(bdim, dtype=dtype, rng=rng)
508
+ x = linalg.cho_solve(c_and_lower, b)
509
+ if len(bdim) == 1:
510
+ x = x[..., np.newaxis]
511
+ b = b[..., np.newaxis]
512
+ assert_allclose(A @ x - b, 0, atol=1e-6)
513
+ assert_allclose(x, np.linalg.solve(A, b), atol=2e-6)
514
+
515
+ @pytest.mark.parametrize('lower', [False, True])
516
+ @pytest.mark.parametrize('bdim', [(5,), (5, 4), (2, 3, 5, 4)])
517
+ @pytest.mark.parametrize('dtype', floating)
518
+ def test_cho_solve_banded(self, lower, bdim, dtype):
519
+ rng = np.random.default_rng(8342310302941288912051)
520
+ A = get_random((2, 3, 3, 5), dtype=dtype, rng=rng)
521
+ row_diag = 0 if lower else -1
522
+ A[:, :, row_diag] = 10
523
+ cb = linalg.cholesky_banded(A, lower=lower)
524
+ b = get_random(bdim, dtype=dtype, rng=rng)
525
+ x = linalg.cho_solve_banded((cb, lower), b)
526
+ for i in range(2):
527
+ for j in range(3):
528
+ bij = b if len(bdim) <= 2 else b[i, j]
529
+ xij = linalg.cho_solve_banded((cb[i, j], lower), bij)
530
+ assert_allclose(x[i, j], xij)
531
+
532
+ @pytest.mark.parametrize('bdim', [(5,), (5, 4), (2, 3, 5, 4)])
533
+ @pytest.mark.parametrize('dtype', floating)
534
+ def test_solveh_banded(self, bdim, dtype):
535
+ rng = np.random.default_rng(8342310302941288912051)
536
+ A = get_random((2, 3, 3, 5), dtype=dtype, rng=rng)
537
+ A[:, :, -1] = 10
538
+ b = get_random(bdim, dtype=dtype, rng=rng)
539
+ x = linalg.solveh_banded(A, b)
540
+ for i in range(2):
541
+ for j in range(3):
542
+ bij = b if len(bdim) <= 2 else b[i, j]
543
+ xij = linalg.solveh_banded(A[i, j], bij)
544
+ assert_allclose(x[i, j], xij)
545
+
546
+ @pytest.mark.parametrize('bdim', [(5,), (5, 4), (2, 3, 5, 4)])
547
+ @pytest.mark.parametrize('dtype', floating)
548
+ def test_solve_triangular(self, bdim, dtype):
549
+ rng = np.random.default_rng(8342310302941288912051)
550
+ A = get_random((2, 3, 5, 5), dtype=dtype, rng=rng)
551
+ A = np.tril(A)
552
+ b = get_random(bdim, dtype=dtype, rng=rng)
553
+ x = linalg.solve_triangular(A, b, lower=True)
554
+ if len(bdim) == 1:
555
+ x = x[..., np.newaxis]
556
+ b = b[..., np.newaxis]
557
+ atol = 1e-10 if dtype in (np.complex128, np.float64) else 2e-4
558
+ assert_allclose(A @ x - b, 0, atol=atol)
559
+ assert_allclose(x, np.linalg.solve(A, b), atol=5*atol)
560
+
561
+ @pytest.mark.parametrize('bdim', [(4,), (4, 3), (2, 3, 4, 3)])
562
+ @pytest.mark.parametrize('dtype', floating)
563
+ def test_lstsq(self, bdim, dtype):
564
+ rng = np.random.default_rng(8342310302941288912051)
565
+ A = get_random((2, 3, 4, 5), dtype=dtype, rng=rng)
566
+ b = get_random(bdim, dtype=dtype, rng=rng)
567
+ res = linalg.lstsq(A, b)
568
+ x = res[0]
569
+ if len(bdim) == 1:
570
+ x = x[..., np.newaxis]
571
+ b = b[..., np.newaxis]
572
+ assert_allclose(A @ x - b, 0, atol=2e-6)
573
+ assert len(res) == 4
574
+
575
+ @pytest.mark.parametrize('dtype', floating)
576
+ def test_clarkson_woodruff_transform(self, dtype):
577
+ rng = np.random.default_rng(8342310302941288912051)
578
+ A = get_random((5, 3, 4, 6), dtype=dtype, rng=rng)
579
+ self.batch_test(linalg.clarkson_woodruff_transform, A,
580
+ kwargs=dict(sketch_size=3, rng=311224))
581
+
582
+ def test_clarkson_woodruff_transform_sparse(self):
583
+ rng = np.random.default_rng(8342310302941288912051)
584
+ A = get_random((5, 3, 4, 6), dtype=np.float64, rng=rng)
585
+ A = sparse.coo_array(A)
586
+ message = "Batch support for sparse arrays is not available."
587
+ with pytest.raises(NotImplementedError, match=message):
588
+ linalg.clarkson_woodruff_transform(A, sketch_size=3, rng=rng)
@@ -19,8 +19,6 @@ def test_bandwidth_dtypes():
19
19
  def test_bandwidth_non2d_input():
20
20
  A = np.array([1, 2, 3])
21
21
  raises(ValueError, bandwidth, A)
22
- A = np.array([[[1, 2, 3], [4, 5, 6]]])
23
- raises(ValueError, bandwidth, A)
24
22
 
25
23
 
26
24
  @pytest.mark.parametrize('T', [x for x in np.typecodes['All']
@@ -404,6 +404,36 @@ class TestEig:
404
404
  assert vr.shape == (0, 0)
405
405
  assert vr.dtype == vr_n.dtype
406
406
 
407
+ @pytest.mark.parametrize("include_B", [False, True])
408
+ @pytest.mark.parametrize("left", [False, True])
409
+ @pytest.mark.parametrize("right", [False, True])
410
+ @pytest.mark.parametrize("homogeneous_eigvals", [False, True])
411
+ @pytest.mark.parametrize("dtype", [np.float32, np.complex128])
412
+ def test_nd_input(self, include_B, left, right, homogeneous_eigvals, dtype):
413
+ batch_shape = (3, 2)
414
+ core_shape = (4, 4)
415
+ rng = np.random.default_rng(3249823598235)
416
+ A = rng.random(batch_shape + core_shape).astype(dtype)
417
+ B = rng.random(batch_shape + core_shape).astype(dtype)
418
+ kwargs = dict(right=right, homogeneous_eigvals=homogeneous_eigvals)
419
+
420
+ if include_B:
421
+ res = eig(A, b=B, left=left, **kwargs)
422
+ else:
423
+ res = eig(A, left=left, **kwargs)
424
+
425
+ for i in range(batch_shape[0]):
426
+ for j in range(batch_shape[1]):
427
+ if include_B:
428
+ ref = eig(A[i, j], b=B[i, j], left=left, **kwargs)
429
+ else:
430
+ ref = eig(A[i, j], left=left, **kwargs)
431
+
432
+ if left or right:
433
+ for k in range(len(ref)):
434
+ assert_allclose(res[k][i, j], ref[k])
435
+ else:
436
+ assert_allclose(res[i, j], ref)
407
437
 
408
438
 
409
439
  class TestEigBanded:
@@ -739,11 +769,11 @@ class TestEigTridiagonal:
739
769
  def test_eigvalsh_tridiagonal(self):
740
770
  """Compare eigenvalues of eigvalsh_tridiagonal with those of eig."""
741
771
  # can't use ?STERF with subselection
742
- for driver in ('sterf', 'stev', 'stebz', 'stemr', 'auto'):
772
+ for driver in ('sterf', 'stev', 'stevd', 'stebz', 'stemr', 'auto'):
743
773
  w = eigvalsh_tridiagonal(self.d, self.e, lapack_driver=driver)
744
774
  assert_array_almost_equal(sort(w), self.w)
745
775
 
746
- for driver in ('sterf', 'stev'):
776
+ for driver in ('sterf', 'stev', 'stevd'):
747
777
  assert_raises(ValueError, eigvalsh_tridiagonal, self.d, self.e,
748
778
  lapack_driver=driver, select='i',
749
779
  select_range=(0, 1))
@@ -776,7 +806,7 @@ class TestEigTridiagonal:
776
806
  # can't use ?STERF when eigenvectors are requested
777
807
  assert_raises(ValueError, eigh_tridiagonal, self.d, self.e,
778
808
  lapack_driver='sterf')
779
- for driver in ('stebz', 'stev', 'stemr', 'auto'):
809
+ for driver in ('stebz', 'stev', 'stevd', 'stemr', 'auto'):
780
810
  w, evec = eigh_tridiagonal(self.d, self.e, lapack_driver=driver)
781
811
  evec_ = evec[:, argsort(w)]
782
812
  assert_array_almost_equal(sort(w), self.w)
@@ -1194,6 +1224,13 @@ def test_svd_gesdd_nofegfault():
1194
1224
  svd(df)
1195
1225
 
1196
1226
 
1227
+ def test_gesdd_nan_error_message():
1228
+ A = np.eye(2)
1229
+ A[0, 0] = np.nan
1230
+ with pytest.raises(ValueError, match="NaN"):
1231
+ svd(A, check_finite=False)
1232
+
1233
+
1197
1234
  class TestSVDVals:
1198
1235
 
1199
1236
  @pytest.mark.parametrize('dt', [int, float, np.float32, complex, np.complex64])