scipy 1.15.2__cp313-cp313t-macosx_14_0_arm64.whl → 1.16.0__cp313-cp313t-macosx_14_0_arm64.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (642) hide show
  1. scipy/.dylibs/libgcc_s.1.1.dylib +0 -0
  2. scipy/.dylibs/libgfortran.5.dylib +0 -0
  3. scipy/.dylibs/libquadmath.0.dylib +0 -0
  4. scipy/__config__.py +5 -5
  5. scipy/__init__.py +3 -6
  6. scipy/_cyutility.cpython-313t-darwin.so +0 -0
  7. scipy/_lib/_array_api.py +497 -161
  8. scipy/_lib/_array_api_compat_vendor.py +9 -0
  9. scipy/_lib/_bunch.py +4 -0
  10. scipy/_lib/_ccallback_c.cpython-313t-darwin.so +0 -0
  11. scipy/_lib/_docscrape.py +1 -1
  12. scipy/_lib/_elementwise_iterative_method.py +15 -26
  13. scipy/_lib/_sparse.py +41 -0
  14. scipy/_lib/_test_ccallback.cpython-313t-darwin.so +0 -0
  15. scipy/_lib/_test_deprecation_call.cpython-313t-darwin.so +0 -0
  16. scipy/_lib/_test_deprecation_def.cpython-313t-darwin.so +0 -0
  17. scipy/_lib/_testutils.py +6 -2
  18. scipy/_lib/_util.py +222 -125
  19. scipy/_lib/array_api_compat/__init__.py +4 -4
  20. scipy/_lib/array_api_compat/_internal.py +19 -6
  21. scipy/_lib/array_api_compat/common/__init__.py +1 -1
  22. scipy/_lib/array_api_compat/common/_aliases.py +365 -193
  23. scipy/_lib/array_api_compat/common/_fft.py +94 -64
  24. scipy/_lib/array_api_compat/common/_helpers.py +413 -180
  25. scipy/_lib/array_api_compat/common/_linalg.py +116 -40
  26. scipy/_lib/array_api_compat/common/_typing.py +179 -10
  27. scipy/_lib/array_api_compat/cupy/__init__.py +1 -4
  28. scipy/_lib/array_api_compat/cupy/_aliases.py +61 -41
  29. scipy/_lib/array_api_compat/cupy/_info.py +16 -6
  30. scipy/_lib/array_api_compat/cupy/_typing.py +24 -39
  31. scipy/_lib/array_api_compat/dask/array/__init__.py +6 -3
  32. scipy/_lib/array_api_compat/dask/array/_aliases.py +267 -108
  33. scipy/_lib/array_api_compat/dask/array/_info.py +105 -34
  34. scipy/_lib/array_api_compat/dask/array/fft.py +5 -8
  35. scipy/_lib/array_api_compat/dask/array/linalg.py +21 -22
  36. scipy/_lib/array_api_compat/numpy/__init__.py +13 -15
  37. scipy/_lib/array_api_compat/numpy/_aliases.py +98 -49
  38. scipy/_lib/array_api_compat/numpy/_info.py +36 -16
  39. scipy/_lib/array_api_compat/numpy/_typing.py +27 -43
  40. scipy/_lib/array_api_compat/numpy/fft.py +11 -5
  41. scipy/_lib/array_api_compat/numpy/linalg.py +75 -22
  42. scipy/_lib/array_api_compat/torch/__init__.py +3 -5
  43. scipy/_lib/array_api_compat/torch/_aliases.py +262 -159
  44. scipy/_lib/array_api_compat/torch/_info.py +27 -16
  45. scipy/_lib/array_api_compat/torch/_typing.py +3 -0
  46. scipy/_lib/array_api_compat/torch/fft.py +17 -18
  47. scipy/_lib/array_api_compat/torch/linalg.py +16 -16
  48. scipy/_lib/array_api_extra/__init__.py +26 -3
  49. scipy/_lib/array_api_extra/_delegation.py +171 -0
  50. scipy/_lib/array_api_extra/_lib/__init__.py +1 -0
  51. scipy/_lib/array_api_extra/_lib/_at.py +463 -0
  52. scipy/_lib/array_api_extra/_lib/_backends.py +46 -0
  53. scipy/_lib/array_api_extra/_lib/_funcs.py +937 -0
  54. scipy/_lib/array_api_extra/_lib/_lazy.py +357 -0
  55. scipy/_lib/array_api_extra/_lib/_testing.py +278 -0
  56. scipy/_lib/array_api_extra/_lib/_utils/__init__.py +1 -0
  57. scipy/_lib/array_api_extra/_lib/_utils/_compat.py +74 -0
  58. scipy/_lib/array_api_extra/_lib/_utils/_compat.pyi +45 -0
  59. scipy/_lib/array_api_extra/_lib/_utils/_helpers.py +559 -0
  60. scipy/_lib/array_api_extra/_lib/_utils/_typing.py +10 -0
  61. scipy/_lib/array_api_extra/_lib/_utils/_typing.pyi +105 -0
  62. scipy/_lib/array_api_extra/testing.py +359 -0
  63. scipy/_lib/decorator.py +2 -2
  64. scipy/_lib/doccer.py +1 -7
  65. scipy/_lib/messagestream.cpython-313t-darwin.so +0 -0
  66. scipy/_lib/pyprima/__init__.py +212 -0
  67. scipy/_lib/pyprima/cobyla/__init__.py +0 -0
  68. scipy/_lib/pyprima/cobyla/cobyla.py +559 -0
  69. scipy/_lib/pyprima/cobyla/cobylb.py +714 -0
  70. scipy/_lib/pyprima/cobyla/geometry.py +226 -0
  71. scipy/_lib/pyprima/cobyla/initialize.py +215 -0
  72. scipy/_lib/pyprima/cobyla/trustregion.py +492 -0
  73. scipy/_lib/pyprima/cobyla/update.py +289 -0
  74. scipy/_lib/pyprima/common/__init__.py +0 -0
  75. scipy/_lib/pyprima/common/_bounds.py +34 -0
  76. scipy/_lib/pyprima/common/_linear_constraints.py +46 -0
  77. scipy/_lib/pyprima/common/_nonlinear_constraints.py +54 -0
  78. scipy/_lib/pyprima/common/_project.py +173 -0
  79. scipy/_lib/pyprima/common/checkbreak.py +93 -0
  80. scipy/_lib/pyprima/common/consts.py +47 -0
  81. scipy/_lib/pyprima/common/evaluate.py +99 -0
  82. scipy/_lib/pyprima/common/history.py +38 -0
  83. scipy/_lib/pyprima/common/infos.py +30 -0
  84. scipy/_lib/pyprima/common/linalg.py +435 -0
  85. scipy/_lib/pyprima/common/message.py +290 -0
  86. scipy/_lib/pyprima/common/powalg.py +131 -0
  87. scipy/_lib/pyprima/common/preproc.py +277 -0
  88. scipy/_lib/pyprima/common/present.py +5 -0
  89. scipy/_lib/pyprima/common/ratio.py +54 -0
  90. scipy/_lib/pyprima/common/redrho.py +47 -0
  91. scipy/_lib/pyprima/common/selectx.py +296 -0
  92. scipy/_lib/tests/test__util.py +105 -121
  93. scipy/_lib/tests/test_array_api.py +169 -34
  94. scipy/_lib/tests/test_bunch.py +7 -0
  95. scipy/_lib/tests/test_ccallback.py +2 -10
  96. scipy/_lib/tests/test_public_api.py +13 -0
  97. scipy/cluster/_hierarchy.cpython-313t-darwin.so +0 -0
  98. scipy/cluster/_optimal_leaf_ordering.cpython-313t-darwin.so +0 -0
  99. scipy/cluster/_vq.cpython-313t-darwin.so +0 -0
  100. scipy/cluster/hierarchy.py +393 -223
  101. scipy/cluster/tests/test_hierarchy.py +273 -335
  102. scipy/cluster/tests/test_vq.py +45 -61
  103. scipy/cluster/vq.py +39 -35
  104. scipy/conftest.py +282 -151
  105. scipy/constants/_constants.py +4 -1
  106. scipy/constants/tests/test_codata.py +2 -2
  107. scipy/constants/tests/test_constants.py +11 -18
  108. scipy/datasets/_download_all.py +15 -1
  109. scipy/datasets/_fetchers.py +7 -1
  110. scipy/datasets/_utils.py +1 -1
  111. scipy/differentiate/_differentiate.py +25 -25
  112. scipy/differentiate/tests/test_differentiate.py +24 -25
  113. scipy/fft/_basic.py +20 -0
  114. scipy/fft/_helper.py +3 -34
  115. scipy/fft/_pocketfft/helper.py +29 -1
  116. scipy/fft/_pocketfft/tests/test_basic.py +2 -4
  117. scipy/fft/_pocketfft/tests/test_real_transforms.py +4 -4
  118. scipy/fft/_realtransforms.py +13 -0
  119. scipy/fft/tests/test_basic.py +27 -25
  120. scipy/fft/tests/test_fftlog.py +16 -7
  121. scipy/fft/tests/test_helper.py +18 -34
  122. scipy/fft/tests/test_real_transforms.py +8 -10
  123. scipy/fftpack/convolve.cpython-313t-darwin.so +0 -0
  124. scipy/fftpack/tests/test_basic.py +2 -4
  125. scipy/fftpack/tests/test_real_transforms.py +8 -9
  126. scipy/integrate/_bvp.py +9 -3
  127. scipy/integrate/_cubature.py +3 -2
  128. scipy/integrate/_dop.cpython-313t-darwin.so +0 -0
  129. scipy/integrate/_ivp/common.py +3 -3
  130. scipy/integrate/_ivp/ivp.py +9 -2
  131. scipy/integrate/_ivp/tests/test_ivp.py +19 -0
  132. scipy/integrate/_lsoda.cpython-313t-darwin.so +0 -0
  133. scipy/integrate/_ode.py +9 -2
  134. scipy/integrate/_odepack.cpython-313t-darwin.so +0 -0
  135. scipy/integrate/_quad_vec.py +21 -29
  136. scipy/integrate/_quadpack.cpython-313t-darwin.so +0 -0
  137. scipy/integrate/_quadpack_py.py +11 -7
  138. scipy/integrate/_quadrature.py +3 -3
  139. scipy/integrate/_rules/_base.py +2 -2
  140. scipy/integrate/_tanhsinh.py +57 -54
  141. scipy/integrate/_test_odeint_banded.cpython-313t-darwin.so +0 -0
  142. scipy/integrate/_vode.cpython-313t-darwin.so +0 -0
  143. scipy/integrate/tests/test__quad_vec.py +0 -6
  144. scipy/integrate/tests/test_banded_ode_solvers.py +85 -0
  145. scipy/integrate/tests/test_cubature.py +21 -35
  146. scipy/integrate/tests/test_quadrature.py +6 -8
  147. scipy/integrate/tests/test_tanhsinh.py +61 -43
  148. scipy/interpolate/__init__.py +70 -58
  149. scipy/interpolate/_bary_rational.py +22 -22
  150. scipy/interpolate/_bsplines.py +119 -66
  151. scipy/interpolate/_cubic.py +65 -50
  152. scipy/interpolate/_dfitpack.cpython-313t-darwin.so +0 -0
  153. scipy/interpolate/_dierckx.cpython-313t-darwin.so +0 -0
  154. scipy/interpolate/_fitpack.cpython-313t-darwin.so +0 -0
  155. scipy/interpolate/_fitpack2.py +9 -6
  156. scipy/interpolate/_fitpack_impl.py +32 -26
  157. scipy/interpolate/_fitpack_repro.py +23 -19
  158. scipy/interpolate/_interpnd.cpython-313t-darwin.so +0 -0
  159. scipy/interpolate/_interpolate.py +30 -12
  160. scipy/interpolate/_ndbspline.py +13 -18
  161. scipy/interpolate/_ndgriddata.py +5 -8
  162. scipy/interpolate/_polyint.py +95 -31
  163. scipy/interpolate/_ppoly.cpython-313t-darwin.so +0 -0
  164. scipy/interpolate/_rbf.py +2 -2
  165. scipy/interpolate/_rbfinterp.py +1 -1
  166. scipy/interpolate/_rbfinterp_pythran.cpython-313t-darwin.so +0 -0
  167. scipy/interpolate/_rgi.py +31 -26
  168. scipy/interpolate/_rgi_cython.cpython-313t-darwin.so +0 -0
  169. scipy/interpolate/dfitpack.py +0 -20
  170. scipy/interpolate/interpnd.py +1 -2
  171. scipy/interpolate/tests/test_bary_rational.py +2 -2
  172. scipy/interpolate/tests/test_bsplines.py +97 -1
  173. scipy/interpolate/tests/test_fitpack2.py +39 -1
  174. scipy/interpolate/tests/test_interpnd.py +32 -20
  175. scipy/interpolate/tests/test_interpolate.py +48 -4
  176. scipy/interpolate/tests/test_rgi.py +2 -1
  177. scipy/io/_fast_matrix_market/__init__.py +2 -0
  178. scipy/io/_harwell_boeing/_fortran_format_parser.py +19 -16
  179. scipy/io/_harwell_boeing/hb.py +7 -11
  180. scipy/io/_idl.py +5 -7
  181. scipy/io/_netcdf.py +15 -5
  182. scipy/io/_test_fortran.cpython-313t-darwin.so +0 -0
  183. scipy/io/arff/tests/test_arffread.py +3 -3
  184. scipy/io/matlab/__init__.py +5 -3
  185. scipy/io/matlab/_mio.py +4 -1
  186. scipy/io/matlab/_mio5.py +19 -13
  187. scipy/io/matlab/_mio5_utils.cpython-313t-darwin.so +0 -0
  188. scipy/io/matlab/_mio_utils.cpython-313t-darwin.so +0 -0
  189. scipy/io/matlab/_miobase.py +4 -1
  190. scipy/io/matlab/_streams.cpython-313t-darwin.so +0 -0
  191. scipy/io/matlab/tests/test_mio.py +46 -18
  192. scipy/io/matlab/tests/test_mio_funcs.py +1 -1
  193. scipy/io/tests/test_mmio.py +7 -1
  194. scipy/io/tests/test_wavfile.py +41 -0
  195. scipy/io/wavfile.py +57 -10
  196. scipy/linalg/_basic.py +113 -86
  197. scipy/linalg/_cythonized_array_utils.cpython-313t-darwin.so +0 -0
  198. scipy/linalg/_decomp.py +22 -9
  199. scipy/linalg/_decomp_cholesky.py +28 -13
  200. scipy/linalg/_decomp_cossin.py +45 -30
  201. scipy/linalg/_decomp_interpolative.cpython-313t-darwin.so +0 -0
  202. scipy/linalg/_decomp_ldl.py +4 -1
  203. scipy/linalg/_decomp_lu.py +18 -6
  204. scipy/linalg/_decomp_lu_cython.cpython-313t-darwin.so +0 -0
  205. scipy/linalg/_decomp_polar.py +2 -0
  206. scipy/linalg/_decomp_qr.py +6 -2
  207. scipy/linalg/_decomp_qz.py +3 -0
  208. scipy/linalg/_decomp_schur.py +3 -1
  209. scipy/linalg/_decomp_svd.py +13 -2
  210. scipy/linalg/_decomp_update.cpython-313t-darwin.so +0 -0
  211. scipy/linalg/_expm_frechet.py +4 -0
  212. scipy/linalg/_fblas.cpython-313t-darwin.so +0 -0
  213. scipy/linalg/_flapack.cpython-313t-darwin.so +0 -0
  214. scipy/linalg/_linalg_pythran.cpython-313t-darwin.so +0 -0
  215. scipy/linalg/_matfuncs.py +187 -4
  216. scipy/linalg/_matfuncs_expm.cpython-313t-darwin.so +0 -0
  217. scipy/linalg/_matfuncs_schur_sqrtm.cpython-313t-darwin.so +0 -0
  218. scipy/linalg/_matfuncs_sqrtm.py +1 -99
  219. scipy/linalg/_matfuncs_sqrtm_triu.cpython-313t-darwin.so +0 -0
  220. scipy/linalg/_procrustes.py +2 -0
  221. scipy/linalg/_sketches.py +17 -6
  222. scipy/linalg/_solve_toeplitz.cpython-313t-darwin.so +0 -0
  223. scipy/linalg/_solvers.py +7 -2
  224. scipy/linalg/_special_matrices.py +26 -36
  225. scipy/linalg/blas.py +35 -24
  226. scipy/linalg/cython_blas.cpython-313t-darwin.so +0 -0
  227. scipy/linalg/cython_lapack.cpython-313t-darwin.so +0 -0
  228. scipy/linalg/lapack.py +22 -2
  229. scipy/linalg/tests/_cython_examples/meson.build +7 -0
  230. scipy/linalg/tests/test_basic.py +31 -16
  231. scipy/linalg/tests/test_batch.py +588 -0
  232. scipy/linalg/tests/test_cythonized_array_utils.py +0 -2
  233. scipy/linalg/tests/test_decomp.py +40 -3
  234. scipy/linalg/tests/test_decomp_cossin.py +14 -0
  235. scipy/linalg/tests/test_decomp_ldl.py +1 -1
  236. scipy/linalg/tests/test_interpolative.py +17 -0
  237. scipy/linalg/tests/test_lapack.py +115 -7
  238. scipy/linalg/tests/test_matfuncs.py +157 -102
  239. scipy/linalg/tests/test_procrustes.py +0 -7
  240. scipy/linalg/tests/test_solve_toeplitz.py +1 -1
  241. scipy/linalg/tests/test_special_matrices.py +1 -5
  242. scipy/ndimage/__init__.py +1 -0
  243. scipy/ndimage/_cytest.cpython-313t-darwin.so +0 -0
  244. scipy/ndimage/_delegators.py +8 -2
  245. scipy/ndimage/_filters.py +453 -5
  246. scipy/ndimage/_interpolation.py +36 -6
  247. scipy/ndimage/_measurements.py +4 -2
  248. scipy/ndimage/_morphology.py +5 -0
  249. scipy/ndimage/_nd_image.cpython-313t-darwin.so +0 -0
  250. scipy/ndimage/_ndimage_api.py +2 -1
  251. scipy/ndimage/_ni_docstrings.py +5 -1
  252. scipy/ndimage/_ni_label.cpython-313t-darwin.so +0 -0
  253. scipy/ndimage/_ni_support.py +1 -5
  254. scipy/ndimage/_rank_filter_1d.cpython-313t-darwin.so +0 -0
  255. scipy/ndimage/_support_alternative_backends.py +18 -6
  256. scipy/ndimage/tests/test_filters.py +384 -259
  257. scipy/ndimage/tests/test_fourier.py +7 -9
  258. scipy/ndimage/tests/test_interpolation.py +68 -61
  259. scipy/ndimage/tests/test_measurements.py +18 -35
  260. scipy/ndimage/tests/test_morphology.py +143 -131
  261. scipy/ndimage/tests/test_splines.py +1 -3
  262. scipy/odr/__odrpack.cpython-313t-darwin.so +0 -0
  263. scipy/optimize/_basinhopping.py +13 -7
  264. scipy/optimize/_bglu_dense.cpython-313t-darwin.so +0 -0
  265. scipy/optimize/_bracket.py +46 -26
  266. scipy/optimize/_chandrupatla.py +9 -10
  267. scipy/optimize/_cobyla_py.py +104 -123
  268. scipy/optimize/_constraints.py +14 -10
  269. scipy/optimize/_differentiable_functions.py +371 -230
  270. scipy/optimize/_differentialevolution.py +4 -3
  271. scipy/optimize/_direct.cpython-313t-darwin.so +0 -0
  272. scipy/optimize/_dual_annealing.py +1 -1
  273. scipy/optimize/_elementwise.py +1 -4
  274. scipy/optimize/_group_columns.cpython-313t-darwin.so +0 -0
  275. scipy/optimize/_highspy/_highs_wrapper.py +6 -4
  276. scipy/optimize/_lbfgsb.cpython-313t-darwin.so +0 -0
  277. scipy/optimize/_lbfgsb_py.py +80 -24
  278. scipy/optimize/_linprog_doc.py +2 -2
  279. scipy/optimize/_linprog_highs.py +11 -11
  280. scipy/optimize/_linprog_ip.py +25 -10
  281. scipy/optimize/_linprog_util.py +18 -19
  282. scipy/optimize/_lsap.cpython-313t-darwin.so +0 -0
  283. scipy/optimize/_lsq/common.py +3 -3
  284. scipy/optimize/_lsq/dogbox.py +16 -2
  285. scipy/optimize/_lsq/givens_elimination.cpython-313t-darwin.so +0 -0
  286. scipy/optimize/_lsq/least_squares.py +198 -126
  287. scipy/optimize/_lsq/lsq_linear.py +6 -6
  288. scipy/optimize/_lsq/trf.py +35 -8
  289. scipy/optimize/_milp.py +3 -1
  290. scipy/optimize/_minimize.py +105 -36
  291. scipy/optimize/_minpack.cpython-313t-darwin.so +0 -0
  292. scipy/optimize/_minpack_py.py +21 -14
  293. scipy/optimize/_moduleTNC.cpython-313t-darwin.so +0 -0
  294. scipy/optimize/_nnls.py +20 -21
  295. scipy/optimize/_nonlin.py +34 -3
  296. scipy/optimize/_numdiff.py +288 -110
  297. scipy/optimize/_optimize.py +86 -48
  298. scipy/optimize/_pava_pybind.cpython-313t-darwin.so +0 -0
  299. scipy/optimize/_remove_redundancy.py +5 -5
  300. scipy/optimize/_root_scalar.py +1 -1
  301. scipy/optimize/_shgo.py +6 -0
  302. scipy/optimize/_shgo_lib/_complex.py +1 -1
  303. scipy/optimize/_slsqp_py.py +216 -124
  304. scipy/optimize/_slsqplib.cpython-313t-darwin.so +0 -0
  305. scipy/optimize/_spectral.py +1 -1
  306. scipy/optimize/_tnc.py +8 -1
  307. scipy/optimize/_trlib/_trlib.cpython-313t-darwin.so +0 -0
  308. scipy/optimize/_trustregion.py +20 -6
  309. scipy/optimize/_trustregion_constr/canonical_constraint.py +7 -7
  310. scipy/optimize/_trustregion_constr/equality_constrained_sqp.py +1 -1
  311. scipy/optimize/_trustregion_constr/minimize_trustregion_constr.py +11 -3
  312. scipy/optimize/_trustregion_constr/projections.py +12 -8
  313. scipy/optimize/_trustregion_constr/qp_subproblem.py +9 -9
  314. scipy/optimize/_trustregion_constr/tests/test_projections.py +7 -7
  315. scipy/optimize/_trustregion_constr/tests/test_qp_subproblem.py +77 -77
  316. scipy/optimize/_trustregion_constr/tr_interior_point.py +5 -5
  317. scipy/optimize/_trustregion_exact.py +0 -1
  318. scipy/optimize/_zeros.cpython-313t-darwin.so +0 -0
  319. scipy/optimize/_zeros_py.py +97 -17
  320. scipy/optimize/cython_optimize/_zeros.cpython-313t-darwin.so +0 -0
  321. scipy/optimize/slsqp.py +0 -1
  322. scipy/optimize/tests/test__basinhopping.py +1 -1
  323. scipy/optimize/tests/test__differential_evolution.py +4 -4
  324. scipy/optimize/tests/test__linprog_clean_inputs.py +5 -3
  325. scipy/optimize/tests/test__numdiff.py +66 -22
  326. scipy/optimize/tests/test__remove_redundancy.py +2 -2
  327. scipy/optimize/tests/test__shgo.py +9 -1
  328. scipy/optimize/tests/test_bracket.py +71 -46
  329. scipy/optimize/tests/test_chandrupatla.py +133 -135
  330. scipy/optimize/tests/test_cobyla.py +74 -45
  331. scipy/optimize/tests/test_constraints.py +1 -1
  332. scipy/optimize/tests/test_differentiable_functions.py +226 -6
  333. scipy/optimize/tests/test_lbfgsb_hessinv.py +22 -0
  334. scipy/optimize/tests/test_least_squares.py +125 -13
  335. scipy/optimize/tests/test_linear_assignment.py +3 -3
  336. scipy/optimize/tests/test_linprog.py +3 -3
  337. scipy/optimize/tests/test_lsq_linear.py +6 -6
  338. scipy/optimize/tests/test_minimize_constrained.py +2 -2
  339. scipy/optimize/tests/test_minpack.py +4 -4
  340. scipy/optimize/tests/test_nnls.py +43 -3
  341. scipy/optimize/tests/test_nonlin.py +36 -0
  342. scipy/optimize/tests/test_optimize.py +98 -20
  343. scipy/optimize/tests/test_slsqp.py +36 -4
  344. scipy/optimize/tests/test_zeros.py +34 -1
  345. scipy/signal/__init__.py +12 -23
  346. scipy/signal/_delegators.py +568 -0
  347. scipy/signal/_filter_design.py +459 -241
  348. scipy/signal/_fir_filter_design.py +262 -90
  349. scipy/signal/_lti_conversion.py +3 -2
  350. scipy/signal/_ltisys.py +118 -91
  351. scipy/signal/_max_len_seq_inner.cpython-313t-darwin.so +0 -0
  352. scipy/signal/_peak_finding_utils.cpython-313t-darwin.so +0 -0
  353. scipy/signal/_polyutils.py +172 -0
  354. scipy/signal/_short_time_fft.py +553 -76
  355. scipy/signal/_signal_api.py +30 -0
  356. scipy/signal/_signaltools.py +719 -396
  357. scipy/signal/_sigtools.cpython-313t-darwin.so +0 -0
  358. scipy/signal/_sosfilt.cpython-313t-darwin.so +0 -0
  359. scipy/signal/_spectral_py.py +230 -50
  360. scipy/signal/_spline.cpython-313t-darwin.so +0 -0
  361. scipy/signal/_spline_filters.py +108 -68
  362. scipy/signal/_support_alternative_backends.py +73 -0
  363. scipy/signal/_upfirdn.py +4 -1
  364. scipy/signal/_upfirdn_apply.cpython-313t-darwin.so +0 -0
  365. scipy/signal/_waveforms.py +2 -11
  366. scipy/signal/_wavelets.py +1 -1
  367. scipy/signal/fir_filter_design.py +1 -0
  368. scipy/signal/spline.py +4 -11
  369. scipy/signal/tests/_scipy_spectral_test_shim.py +5 -182
  370. scipy/signal/tests/test_bsplines.py +114 -79
  371. scipy/signal/tests/test_cont2discrete.py +9 -2
  372. scipy/signal/tests/test_filter_design.py +721 -481
  373. scipy/signal/tests/test_fir_filter_design.py +332 -140
  374. scipy/signal/tests/test_savitzky_golay.py +4 -3
  375. scipy/signal/tests/test_short_time_fft.py +231 -5
  376. scipy/signal/tests/test_signaltools.py +2150 -1349
  377. scipy/signal/tests/test_spectral.py +50 -6
  378. scipy/signal/tests/test_splines.py +161 -96
  379. scipy/signal/tests/test_upfirdn.py +84 -50
  380. scipy/signal/tests/test_waveforms.py +20 -0
  381. scipy/signal/tests/test_windows.py +607 -466
  382. scipy/signal/windows/_windows.py +287 -148
  383. scipy/sparse/__init__.py +23 -4
  384. scipy/sparse/_base.py +269 -120
  385. scipy/sparse/_bsr.py +7 -4
  386. scipy/sparse/_compressed.py +59 -234
  387. scipy/sparse/_construct.py +90 -38
  388. scipy/sparse/_coo.py +115 -181
  389. scipy/sparse/_csc.py +4 -4
  390. scipy/sparse/_csparsetools.cpython-313t-darwin.so +0 -0
  391. scipy/sparse/_csr.py +2 -2
  392. scipy/sparse/_data.py +48 -48
  393. scipy/sparse/_dia.py +105 -21
  394. scipy/sparse/_dok.py +0 -23
  395. scipy/sparse/_index.py +4 -4
  396. scipy/sparse/_matrix.py +23 -0
  397. scipy/sparse/_sparsetools.cpython-313t-darwin.so +0 -0
  398. scipy/sparse/_sputils.py +37 -22
  399. scipy/sparse/base.py +0 -9
  400. scipy/sparse/bsr.py +0 -14
  401. scipy/sparse/compressed.py +0 -23
  402. scipy/sparse/construct.py +0 -6
  403. scipy/sparse/coo.py +0 -14
  404. scipy/sparse/csc.py +0 -3
  405. scipy/sparse/csgraph/_flow.cpython-313t-darwin.so +0 -0
  406. scipy/sparse/csgraph/_matching.cpython-313t-darwin.so +0 -0
  407. scipy/sparse/csgraph/_min_spanning_tree.cpython-313t-darwin.so +0 -0
  408. scipy/sparse/csgraph/_reordering.cpython-313t-darwin.so +0 -0
  409. scipy/sparse/csgraph/_shortest_path.cpython-313t-darwin.so +0 -0
  410. scipy/sparse/csgraph/_tools.cpython-313t-darwin.so +0 -0
  411. scipy/sparse/csgraph/_traversal.cpython-313t-darwin.so +0 -0
  412. scipy/sparse/csgraph/tests/test_matching.py +14 -2
  413. scipy/sparse/csgraph/tests/test_pydata_sparse.py +4 -1
  414. scipy/sparse/csgraph/tests/test_shortest_path.py +83 -27
  415. scipy/sparse/csr.py +0 -5
  416. scipy/sparse/data.py +1 -6
  417. scipy/sparse/dia.py +0 -7
  418. scipy/sparse/dok.py +0 -10
  419. scipy/sparse/linalg/_dsolve/_superlu.cpython-313t-darwin.so +0 -0
  420. scipy/sparse/linalg/_dsolve/linsolve.py +9 -0
  421. scipy/sparse/linalg/_dsolve/tests/test_linsolve.py +35 -28
  422. scipy/sparse/linalg/_eigen/arpack/_arpack.cpython-313t-darwin.so +0 -0
  423. scipy/sparse/linalg/_eigen/arpack/arpack.py +28 -20
  424. scipy/sparse/linalg/_eigen/lobpcg/lobpcg.py +6 -6
  425. scipy/sparse/linalg/_expm_multiply.py +8 -3
  426. scipy/sparse/linalg/_interface.py +29 -26
  427. scipy/sparse/linalg/_isolve/_gcrotmk.py +6 -5
  428. scipy/sparse/linalg/_isolve/iterative.py +51 -45
  429. scipy/sparse/linalg/_isolve/lgmres.py +6 -6
  430. scipy/sparse/linalg/_isolve/minres.py +5 -5
  431. scipy/sparse/linalg/_isolve/tfqmr.py +7 -7
  432. scipy/sparse/linalg/_isolve/utils.py +2 -8
  433. scipy/sparse/linalg/_matfuncs.py +1 -1
  434. scipy/sparse/linalg/_norm.py +1 -1
  435. scipy/sparse/linalg/_propack/_cpropack.cpython-313t-darwin.so +0 -0
  436. scipy/sparse/linalg/_propack/_dpropack.cpython-313t-darwin.so +0 -0
  437. scipy/sparse/linalg/_propack/_spropack.cpython-313t-darwin.so +0 -0
  438. scipy/sparse/linalg/_propack/_zpropack.cpython-313t-darwin.so +0 -0
  439. scipy/sparse/linalg/_special_sparse_arrays.py +39 -38
  440. scipy/sparse/linalg/tests/test_expm_multiply.py +10 -0
  441. scipy/sparse/linalg/tests/test_interface.py +35 -0
  442. scipy/sparse/linalg/tests/test_pydata_sparse.py +18 -0
  443. scipy/sparse/tests/test_arithmetic1d.py +5 -2
  444. scipy/sparse/tests/test_base.py +224 -40
  445. scipy/sparse/tests/test_common1d.py +17 -12
  446. scipy/sparse/tests/test_construct.py +1 -1
  447. scipy/sparse/tests/test_coo.py +272 -4
  448. scipy/sparse/tests/test_sparsetools.py +5 -0
  449. scipy/sparse/tests/test_sputils.py +36 -7
  450. scipy/spatial/_ckdtree.cpython-313t-darwin.so +0 -0
  451. scipy/spatial/_distance_pybind.cpython-313t-darwin.so +0 -0
  452. scipy/spatial/_distance_wrap.cpython-313t-darwin.so +0 -0
  453. scipy/spatial/_hausdorff.cpython-313t-darwin.so +0 -0
  454. scipy/spatial/_qhull.cpython-313t-darwin.so +0 -0
  455. scipy/spatial/_voronoi.cpython-313t-darwin.so +0 -0
  456. scipy/spatial/distance.py +49 -42
  457. scipy/spatial/tests/test_distance.py +15 -1
  458. scipy/spatial/tests/test_kdtree.py +1 -0
  459. scipy/spatial/tests/test_qhull.py +106 -2
  460. scipy/spatial/transform/__init__.py +5 -3
  461. scipy/spatial/transform/_rigid_transform.cpython-313t-darwin.so +0 -0
  462. scipy/spatial/transform/_rotation.cpython-313t-darwin.so +0 -0
  463. scipy/spatial/transform/tests/test_rigid_transform.py +1221 -0
  464. scipy/spatial/transform/tests/test_rotation.py +1342 -790
  465. scipy/spatial/transform/tests/test_rotation_groups.py +3 -3
  466. scipy/spatial/transform/tests/test_rotation_spline.py +29 -8
  467. scipy/special/__init__.py +1 -47
  468. scipy/special/_add_newdocs.py +34 -772
  469. scipy/special/_basic.py +22 -25
  470. scipy/special/_comb.cpython-313t-darwin.so +0 -0
  471. scipy/special/_ellip_harm_2.cpython-313t-darwin.so +0 -0
  472. scipy/special/_gufuncs.cpython-313t-darwin.so +0 -0
  473. scipy/special/_logsumexp.py +83 -69
  474. scipy/special/_orthogonal.pyi +1 -1
  475. scipy/special/_specfun.cpython-313t-darwin.so +0 -0
  476. scipy/special/_special_ufuncs.cpython-313t-darwin.so +0 -0
  477. scipy/special/_spherical_bessel.py +4 -4
  478. scipy/special/_support_alternative_backends.py +212 -119
  479. scipy/special/_test_internal.cpython-313t-darwin.so +0 -0
  480. scipy/special/_testutils.py +4 -4
  481. scipy/special/_ufuncs.cpython-313t-darwin.so +0 -0
  482. scipy/special/_ufuncs.pyi +1 -0
  483. scipy/special/_ufuncs.pyx +215 -1400
  484. scipy/special/_ufuncs_cxx.cpython-313t-darwin.so +0 -0
  485. scipy/special/_ufuncs_cxx.pxd +2 -15
  486. scipy/special/_ufuncs_cxx.pyx +5 -44
  487. scipy/special/_ufuncs_cxx_defs.h +2 -16
  488. scipy/special/_ufuncs_defs.h +0 -8
  489. scipy/special/cython_special.cpython-313t-darwin.so +0 -0
  490. scipy/special/cython_special.pxd +1 -1
  491. scipy/special/tests/_cython_examples/meson.build +10 -1
  492. scipy/special/tests/test_basic.py +153 -20
  493. scipy/special/tests/test_boost_ufuncs.py +3 -0
  494. scipy/special/tests/test_cdflib.py +35 -11
  495. scipy/special/tests/test_gammainc.py +16 -0
  496. scipy/special/tests/test_hyp2f1.py +23 -2
  497. scipy/special/tests/test_log1mexp.py +85 -0
  498. scipy/special/tests/test_logsumexp.py +220 -64
  499. scipy/special/tests/test_mpmath.py +1 -0
  500. scipy/special/tests/test_nan_inputs.py +1 -1
  501. scipy/special/tests/test_orthogonal.py +17 -18
  502. scipy/special/tests/test_sf_error.py +3 -2
  503. scipy/special/tests/test_sph_harm.py +6 -7
  504. scipy/special/tests/test_support_alternative_backends.py +211 -76
  505. scipy/stats/__init__.py +4 -1
  506. scipy/stats/_ansari_swilk_statistics.cpython-313t-darwin.so +0 -0
  507. scipy/stats/_axis_nan_policy.py +5 -12
  508. scipy/stats/_biasedurn.cpython-313t-darwin.so +0 -0
  509. scipy/stats/_continued_fraction.py +387 -0
  510. scipy/stats/_continuous_distns.py +296 -319
  511. scipy/stats/_correlation.py +1 -1
  512. scipy/stats/_covariance.py +6 -3
  513. scipy/stats/_discrete_distns.py +39 -32
  514. scipy/stats/_distn_infrastructure.py +39 -12
  515. scipy/stats/_distribution_infrastructure.py +920 -238
  516. scipy/stats/_entropy.py +9 -10
  517. scipy/{_lib → stats}/_finite_differences.py +1 -1
  518. scipy/stats/_hypotests.py +83 -50
  519. scipy/stats/_kde.py +53 -49
  520. scipy/stats/_ksstats.py +1 -1
  521. scipy/stats/_levy_stable/__init__.py +7 -15
  522. scipy/stats/_levy_stable/levyst.cpython-313t-darwin.so +0 -0
  523. scipy/stats/_morestats.py +118 -73
  524. scipy/stats/_mstats_basic.py +13 -17
  525. scipy/stats/_mstats_extras.py +8 -8
  526. scipy/stats/_multivariate.py +89 -113
  527. scipy/stats/_new_distributions.py +97 -20
  528. scipy/stats/_page_trend_test.py +12 -5
  529. scipy/stats/_probability_distribution.py +265 -43
  530. scipy/stats/_qmc.py +14 -9
  531. scipy/stats/_qmc_cy.cpython-313t-darwin.so +0 -0
  532. scipy/stats/_qmvnt.py +16 -95
  533. scipy/stats/_qmvnt_cy.cpython-313t-darwin.so +0 -0
  534. scipy/stats/_quantile.py +335 -0
  535. scipy/stats/_rcont/rcont.cpython-313t-darwin.so +0 -0
  536. scipy/stats/_resampling.py +5 -30
  537. scipy/stats/_sampling.py +1 -1
  538. scipy/stats/_sobol.cpython-313t-darwin.so +0 -0
  539. scipy/stats/_stats.cpython-313t-darwin.so +0 -0
  540. scipy/stats/_stats_mstats_common.py +21 -2
  541. scipy/stats/_stats_py.py +551 -477
  542. scipy/stats/_stats_pythran.cpython-313t-darwin.so +0 -0
  543. scipy/stats/_unuran/unuran_wrapper.cpython-313t-darwin.so +0 -0
  544. scipy/stats/_unuran/unuran_wrapper.pyi +2 -1
  545. scipy/stats/_variation.py +6 -8
  546. scipy/stats/_wilcoxon.py +13 -7
  547. scipy/stats/tests/common_tests.py +6 -4
  548. scipy/stats/tests/test_axis_nan_policy.py +62 -24
  549. scipy/stats/tests/test_continued_fraction.py +173 -0
  550. scipy/stats/tests/test_continuous.py +379 -60
  551. scipy/stats/tests/test_continuous_basic.py +18 -12
  552. scipy/stats/tests/test_discrete_basic.py +14 -8
  553. scipy/stats/tests/test_discrete_distns.py +16 -16
  554. scipy/stats/tests/test_distributions.py +117 -75
  555. scipy/stats/tests/test_entropy.py +40 -48
  556. scipy/stats/tests/test_fit.py +4 -3
  557. scipy/stats/tests/test_hypotests.py +153 -24
  558. scipy/stats/tests/test_kdeoth.py +109 -41
  559. scipy/stats/tests/test_marray.py +289 -0
  560. scipy/stats/tests/test_morestats.py +81 -49
  561. scipy/stats/tests/test_mstats_basic.py +3 -3
  562. scipy/stats/tests/test_multivariate.py +434 -83
  563. scipy/stats/tests/test_qmc.py +13 -10
  564. scipy/stats/tests/test_quantile.py +199 -0
  565. scipy/stats/tests/test_rank.py +119 -112
  566. scipy/stats/tests/test_resampling.py +47 -56
  567. scipy/stats/tests/test_sampling.py +9 -4
  568. scipy/stats/tests/test_stats.py +799 -939
  569. scipy/stats/tests/test_variation.py +8 -6
  570. scipy/version.py +2 -2
  571. {scipy-1.15.2.dist-info → scipy-1.16.0.dist-info}/LICENSE.txt +4 -4
  572. {scipy-1.15.2.dist-info → scipy-1.16.0.dist-info}/METADATA +12 -12
  573. {scipy-1.15.2.dist-info → scipy-1.16.0.dist-info}/RECORD +574 -581
  574. scipy-1.16.0.dist-info/WHEEL +6 -0
  575. scipy/_lib/array_api_extra/_funcs.py +0 -484
  576. scipy/_lib/array_api_extra/_typing.py +0 -8
  577. scipy/interpolate/_bspl.cpython-313t-darwin.so +0 -0
  578. scipy/optimize/_cobyla.cpython-313t-darwin.so +0 -0
  579. scipy/optimize/_cython_nnls.cpython-313t-darwin.so +0 -0
  580. scipy/optimize/_slsqp.cpython-313t-darwin.so +0 -0
  581. scipy/spatial/qhull_src/COPYING.txt +0 -38
  582. scipy/special/libsf_error_state.dylib +0 -0
  583. scipy/special/tests/test_log_softmax.py +0 -109
  584. scipy/special/tests/test_xsf_cuda.py +0 -114
  585. scipy/special/xsf/binom.h +0 -89
  586. scipy/special/xsf/cdflib.h +0 -100
  587. scipy/special/xsf/cephes/airy.h +0 -307
  588. scipy/special/xsf/cephes/besselpoly.h +0 -51
  589. scipy/special/xsf/cephes/beta.h +0 -257
  590. scipy/special/xsf/cephes/cbrt.h +0 -131
  591. scipy/special/xsf/cephes/chbevl.h +0 -85
  592. scipy/special/xsf/cephes/chdtr.h +0 -193
  593. scipy/special/xsf/cephes/const.h +0 -87
  594. scipy/special/xsf/cephes/ellie.h +0 -293
  595. scipy/special/xsf/cephes/ellik.h +0 -251
  596. scipy/special/xsf/cephes/ellpe.h +0 -107
  597. scipy/special/xsf/cephes/ellpk.h +0 -117
  598. scipy/special/xsf/cephes/expn.h +0 -260
  599. scipy/special/xsf/cephes/gamma.h +0 -398
  600. scipy/special/xsf/cephes/hyp2f1.h +0 -596
  601. scipy/special/xsf/cephes/hyperg.h +0 -361
  602. scipy/special/xsf/cephes/i0.h +0 -149
  603. scipy/special/xsf/cephes/i1.h +0 -158
  604. scipy/special/xsf/cephes/igam.h +0 -421
  605. scipy/special/xsf/cephes/igam_asymp_coeff.h +0 -195
  606. scipy/special/xsf/cephes/igami.h +0 -313
  607. scipy/special/xsf/cephes/j0.h +0 -225
  608. scipy/special/xsf/cephes/j1.h +0 -198
  609. scipy/special/xsf/cephes/jv.h +0 -715
  610. scipy/special/xsf/cephes/k0.h +0 -164
  611. scipy/special/xsf/cephes/k1.h +0 -163
  612. scipy/special/xsf/cephes/kn.h +0 -243
  613. scipy/special/xsf/cephes/lanczos.h +0 -112
  614. scipy/special/xsf/cephes/ndtr.h +0 -275
  615. scipy/special/xsf/cephes/poch.h +0 -85
  616. scipy/special/xsf/cephes/polevl.h +0 -167
  617. scipy/special/xsf/cephes/psi.h +0 -194
  618. scipy/special/xsf/cephes/rgamma.h +0 -111
  619. scipy/special/xsf/cephes/scipy_iv.h +0 -811
  620. scipy/special/xsf/cephes/shichi.h +0 -248
  621. scipy/special/xsf/cephes/sici.h +0 -224
  622. scipy/special/xsf/cephes/sindg.h +0 -221
  623. scipy/special/xsf/cephes/tandg.h +0 -139
  624. scipy/special/xsf/cephes/trig.h +0 -58
  625. scipy/special/xsf/cephes/unity.h +0 -186
  626. scipy/special/xsf/cephes/zeta.h +0 -172
  627. scipy/special/xsf/config.h +0 -304
  628. scipy/special/xsf/digamma.h +0 -205
  629. scipy/special/xsf/error.h +0 -57
  630. scipy/special/xsf/evalpoly.h +0 -47
  631. scipy/special/xsf/expint.h +0 -266
  632. scipy/special/xsf/hyp2f1.h +0 -694
  633. scipy/special/xsf/iv_ratio.h +0 -173
  634. scipy/special/xsf/lambertw.h +0 -150
  635. scipy/special/xsf/loggamma.h +0 -163
  636. scipy/special/xsf/sici.h +0 -200
  637. scipy/special/xsf/tools.h +0 -427
  638. scipy/special/xsf/trig.h +0 -164
  639. scipy/special/xsf/wright_bessel.h +0 -843
  640. scipy/special/xsf/zlog1.h +0 -35
  641. scipy/stats/_mvn.cpython-313t-darwin.so +0 -0
  642. scipy-1.15.2.dist-info/WHEEL +0 -4
@@ -0,0 +1,93 @@
1
+ '''
2
+ This module checks whether to break out of the solver loop.
3
+
4
+ Translated from Zaikun Zhang's modern-Fortran reference implementation in PRIMA.
5
+
6
+ Dedicated to late Professor M. J. D. Powell FRS (1936--2015).
7
+
8
+ Python translation by Nickolai Belakovski.
9
+ '''
10
+
11
+ from .infos import INFO_DEFAULT, NAN_INF_X, NAN_INF_F, FTARGET_ACHIEVED, MAXFUN_REACHED
12
+
13
+ import numpy as np
14
+
15
+ def checkbreak_unc(maxfun, nf, f, ftarget, x):
16
+ '''
17
+ This module checks whether to break out of the solver loop in the unconstrained case.
18
+ '''
19
+
20
+ # Outputs
21
+ info = INFO_DEFAULT
22
+
23
+ # Local variables
24
+ srname = "CHECKbreak_UNC"
25
+
26
+ # Preconditions
27
+ assert INFO_DEFAULT not in [NAN_INF_X, NAN_INF_F, FTARGET_ACHIEVED, MAXFUN_REACHED], f'NAN_INF_X, NAN_INF_F, FTARGET_ACHIEVED, and MAXFUN_REACHED differ from INFO_DFT {srname}'
28
+ # X does not contain NaN if the initial X does not contain NaN and the subroutines generating
29
+ # trust-region/geometry steps work properly so that they never produce a step containing NaN/Inf.
30
+ assert not any(np.isnan(x)), f'X does not contain NaN {srname}'
31
+ # With the moderated extreme barrier, F cannot be NaN/+Inf.
32
+ assert not (any(np.isnan(f)) or any(np.isposinf(f))), f'F is not NaN/+Inf {srname}'
33
+
34
+ #====================#
35
+ # Calculation starts #
36
+ #====================#
37
+
38
+ # Although X should not contain NaN unless there is a bug, we include the following for security.
39
+ # X can be Inf, as finite + finite can be Inf numerically.
40
+ if any(np.isnan(x)) or any(np.isinf(x)):
41
+ info = NAN_INF_X
42
+
43
+ # Although NAN_INF_F should not happen unless there is a bug, we include the following for security.
44
+ if any(np.isnan(f)) or any(np.isposinf(f)):
45
+ info = NAN_INF_F
46
+
47
+ if f <= ftarget:
48
+ info = FTARGET_ACHIEVED
49
+
50
+ if nf >= maxfun:
51
+ info = MAXFUN_REACHED
52
+
53
+ return info
54
+
55
+ def checkbreak_con(maxfun, nf, cstrv, ctol, f, ftarget, x):
56
+ '''
57
+ This module checks whether to break out of the solver loop in the constrained case.
58
+ '''
59
+
60
+ # Outputs
61
+ info = INFO_DEFAULT
62
+
63
+ # Local variables
64
+ srname = "CHECKbreak_CON"
65
+
66
+ # Preconditions
67
+ assert INFO_DEFAULT not in [NAN_INF_X, NAN_INF_F, FTARGET_ACHIEVED, MAXFUN_REACHED], f'NAN_INF_X, NAN_INF_F, FTARGET_ACHIEVED, and MAXFUN_REACHED differ from INFO_DFT {srname}'
68
+ # X does not contain NaN if the initial X does not contain NaN and the subroutines generating
69
+ # trust-region/geometry steps work properly so that they never produce a step containing NaN/Inf.
70
+ assert not any(np.isnan(x)), f'X does not contain NaN {srname}'
71
+ # With the moderated extreme barrier, F or CSTRV cannot be NaN/+Inf.
72
+ assert not (np.isnan(f) or np.isposinf(f) or np.isnan(cstrv) or np.isposinf(cstrv)), f'F or CSTRV is not NaN/+Inf {srname}'
73
+
74
+ #====================#
75
+ # Calculation starts #
76
+ #====================#
77
+
78
+ # Although X should not contain NaN unless there is a bug, we include the following for security.
79
+ # X can be Inf, as finite + finite can be Inf numerically.
80
+ if any(np.isnan(x)) or any(np.isinf(x)):
81
+ info = NAN_INF_X
82
+
83
+ # Although NAN_INF_F should not happen unless there is a bug, we include the following for security.
84
+ if np.isnan(f) or np.isposinf(f) or np.isnan(cstrv) or np.isposinf(cstrv):
85
+ info = NAN_INF_F
86
+
87
+ if cstrv <= ctol and f <= ftarget:
88
+ info = FTARGET_ACHIEVED
89
+
90
+ if nf >= maxfun:
91
+ info = MAXFUN_REACHED
92
+
93
+ return info
@@ -0,0 +1,47 @@
1
+ '''
2
+ This is a module defining some constants.
3
+
4
+ Translated from Zaikun Zhang's modern-Fortran reference implementation in PRIMA.
5
+
6
+ Dedicated to late Professor M. J. D. Powell FRS (1936--2015).
7
+
8
+ Python translation by Nickolai Belakovski.
9
+ '''
10
+
11
+ import numpy as np
12
+ import os
13
+
14
+ DEBUGGING = bool(os.getenv('PRIMA_DEBUGGING'))
15
+
16
+ REALMIN = np.finfo(float).tiny
17
+ REALMAX = np.finfo(float).max
18
+ FUNCMAX = 10.0**30
19
+ CONSTRMAX = FUNCMAX
20
+ EPS = np.finfo(float).eps
21
+
22
+ # Any bound with an absolute value at least BOUNDMAX is considered as no bound.
23
+ BOUNDMAX = REALMAX/4
24
+
25
+ # Some default values
26
+ RHOBEG_DEFAULT = 1
27
+ RHOEND_DEFAULT = 1e-6
28
+ FTARGET_DEFAULT = -REALMAX
29
+ CTOL_DEFAULT = np.sqrt(EPS)
30
+ CWEIGHT_DEFAULT = 1e8
31
+ ETA1_DEFAULT = 0.1
32
+ ETA2_DEFAULT = 0.7
33
+ GAMMA1_DEFAULT = 0.5
34
+ GAMMA2_DEFAULT = 2
35
+ IPRINT_DEFAULT = 0
36
+ MAXFUN_DIM_DEFAULT = 500
37
+
38
+ PRIMA_MAX_HIST_MEM_MB = 300 # 1MB > 10^5*REAL64. 100 can be too small.
39
+
40
+ # Maximal amount of memory (Byte) allowed for XHIST, FHIST, CONHIST, CHIST, and the filters.
41
+ MHM = PRIMA_MAX_HIST_MEM_MB * 10**6
42
+ # Make sure that MAXHISTMEM does not exceed HUGE(0) to avoid overflow and memory errors.
43
+ MAXHISTMEM = min(MHM, np.iinfo(np.int32).max)
44
+
45
+ # Maximal length of the filter used in constrained solvers.
46
+ MIN_MAXFILT = 200 # Should be positive; < 200 is not recommended.
47
+ MAXFILT_DEFAULT = 10 * MIN_MAXFILT
@@ -0,0 +1,99 @@
1
+ '''
2
+ This is a module evaluating the objective/constraint function with Nan/Inf handling.
3
+
4
+ Translated from Zaikun Zhang's modern-Fortran reference implementation in PRIMA.
5
+
6
+ Dedicated to late Professor M. J. D. Powell FRS (1936--2015).
7
+
8
+ Python translation by Nickolai Belakovski.
9
+ '''
10
+
11
+ import numpy as np
12
+ from .consts import FUNCMAX, CONSTRMAX, REALMAX, DEBUGGING
13
+ from .linalg import matprod, primasum
14
+
15
+ # This is a module evaluating the objective/constraint function with Nan/Inf handling.
16
+
17
+
18
+ def moderatex(x):
19
+ '''
20
+ This function moderates a decision variable. It replaces NaN by 0 and Inf/-Inf by
21
+ REALMAX/-REALMAX.
22
+ '''
23
+ x[np.isnan(x)] = 0
24
+ x = np.clip(x, -REALMAX, REALMAX)
25
+ return x
26
+
27
+ def moderatef(f):
28
+ """
29
+ This function moderates the function value of a MINIMIZATION problem. It replaces
30
+ NaN and any value above FUNCMAX by FUNCMAX.
31
+ """
32
+ f = FUNCMAX if np.isnan(f) else f
33
+ f = np.clip(f, -REALMAX, FUNCMAX)
34
+ # We may moderate huge negative function values as follows, but we decide not to.
35
+ # f = np.clip(f, -FUNCMAX, FUNCMAX)
36
+ return f
37
+
38
+
39
+ def moderatec(c):
40
+ """
41
+ This function moderates the constraint value, the constraint demanding this value
42
+ to be NONNEGATIVE. It replaces any value below -CONSTRMAX by -CONSTRMAX, and any
43
+ NaN or value above CONSTRMAX by CONSTRMAX.
44
+ """
45
+ np.nan_to_num(c, copy=False, nan=CONSTRMAX)
46
+ c = np.clip(c, -CONSTRMAX, CONSTRMAX)
47
+ return c
48
+
49
+
50
+ def evaluate(calcfc, x, m_nlcon, amat, bvec):
51
+ """
52
+ This function evaluates CALCFC at X, returning the objective function value and the
53
+ constraint value. Nan/Inf are handled by a moderated extreme barrier.
54
+ """
55
+
56
+ # Sizes
57
+ m_lcon = len(bvec) if bvec is not None else 0
58
+
59
+ # Preconditions
60
+ if DEBUGGING:
61
+ # X should not contain NaN if the initial X does not contain NaN and the
62
+ # subroutines generating # trust-region/geometry steps work properly so that
63
+ # they never produce a step containing NaN/Inf.
64
+ assert not any(np.isnan(x))
65
+
66
+ #====================#
67
+ # Calculation starts #
68
+ #====================#
69
+
70
+ constr = np.zeros(m_lcon + m_nlcon)
71
+ if amat is not None:
72
+ constr[:m_lcon] = matprod(x, amat.T) - bvec
73
+
74
+ if any(np.isnan(x)):
75
+ # Although this should not happen unless there is a bug, we include this case
76
+ # for robustness.
77
+ f = primasum(x)
78
+ constr = np.ones(m_nlcon) * f
79
+ else:
80
+ f, constr[m_lcon:] = calcfc(moderatex(x))
81
+
82
+ # Moderated extreme barrier: replace NaN/huge objective or constraint values
83
+ # with a large but finite value. This is naive, and better approaches surely
84
+ # exist.
85
+ f = moderatef(f)
86
+ constr[m_lcon:] = moderatec(constr[m_lcon:])
87
+
88
+ #==================#
89
+ # Calculation ends #
90
+ #==================#
91
+
92
+ # Postconditions
93
+ if DEBUGGING:
94
+ # With X not containing NaN, and with the moderated extreme barrier, F cannot
95
+ # be NaN/+Inf, and CONSTR cannot be NaN/-Inf.
96
+ assert not (np.isnan(f) or np.isposinf(f))
97
+ assert not any(np.isnan(constr) | np.isposinf(constr))
98
+
99
+ return f, constr
@@ -0,0 +1,38 @@
1
+ '''
2
+ This module provides subroutines that handle the X/F/C histories of the solver, taking into
3
+ account that MAXHIST may be smaller than NF.
4
+
5
+ Translated from Zaikun Zhang's modern-Fortran reference implementation in PRIMA.
6
+
7
+ Dedicated to late Professor M. J. D. Powell FRS (1936--2015).
8
+
9
+ Python translation by Nickolai Belakovski.
10
+ '''
11
+
12
+ def savehist(maxhist, x, xhist, f, fhist, cstrv, chist, constr, conhist):
13
+ '''
14
+ Save the data values to the history lists.
15
+
16
+ The implementation of this function is vastly different from the Fortran implementation.
17
+ This is mostly due to the ease of creating and appending to lists in Python
18
+
19
+ However just like the Fortran version we should be concerned about both performance
20
+ and memory constraints. It will probably be better to initialize an array of NaN for
21
+ each of the histories and keep track of how many indices we have stored. Not needed for
22
+ the moment.
23
+ '''
24
+ if len(xhist) < maxhist:
25
+ xhist.append(x)
26
+ fhist.append(f)
27
+ chist.append(cstrv)
28
+ conhist.append(constr)
29
+ else:
30
+ # This effectively accomplishes what rangehist does in the Fortran implementation
31
+ xhist.pop(0)
32
+ fhist.pop(0)
33
+ chist.pop(0)
34
+ conhist.pop(0)
35
+ xhist.append(x)
36
+ fhist.append(f)
37
+ chist.append(cstrv)
38
+ conhist.append(constr)
@@ -0,0 +1,30 @@
1
+ '''
2
+ This is a module defining exit flags.
3
+
4
+ Translated from Zaikun Zhang's modern-Fortran reference implementation in PRIMA.
5
+
6
+ Dedicated to late Professor M. J. D. Powell FRS (1936--2015).
7
+
8
+ Python translation by Nickolai Belakovski.
9
+ '''
10
+
11
+ INFO_DEFAULT = 0
12
+ SMALL_TR_RADIUS = 0
13
+ FTARGET_ACHIEVED = 1
14
+ TRSUBP_FAILED = 2
15
+ MAXFUN_REACHED = 3
16
+ MAXTR_REACHED = 20
17
+ NAN_INF_X = -1
18
+ NAN_INF_F = -2
19
+ NAN_INF_MODEL = -3
20
+ NO_SPACE_BETWEEN_BOUNDS = 6
21
+ DAMAGING_ROUNDING = 7
22
+ ZERO_LINEAR_CONSTRAINT = 8
23
+ CALLBACK_TERMINATE = 30
24
+
25
+ # Stop-codes.
26
+ # The following codes are used by ERROR STOP as stop-codes, which should be default integers.
27
+ INVALID_INPUT = 100
28
+ ASSERTION_FAILS = 101
29
+ VALIDATION_FAILS = 102
30
+ MEMORY_ALLOCATION_FAILS = 103