scipion-pyworkflow 3.7.0__py3-none-any.whl

scipion_pyworkflow-3.7.0.dist-info/METADATA

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+Metadata-Version: 2.1
+Name: scipion-pyworkflow
+Version: 3.7.0
+Summary: Simple workflow platform used in scientific applications, initially developed within the Scipion framework for image processing in Electron Microscopy.
+Home-page: https://github.com/scipion-em/scipion-pyworkflow
+Author: J.M. De la Rosa Trevin, Roberto Marabini, Grigory Sharov, Josue Gomez Blanco, Pablo Conesa, Yunior Fonseca Reyna
+Author-email: delarosatrevin@scilifelab.se, roberto@cnb.csic.es, gsharov@mrc-lmb.cam.ac.uk, josue.gomez-blanco@mcgill.ca, pconesa@cnb.csic.es, fonsecareyna@cnb.csic.es
+Project-URL: Bug Reports, https://github.com/scipion-em/scipion-pyworkflow/issues
+Project-URL: Source, https://github.com/scipion-em/scipion-pyworkflow/
+Keywords: workflows science electron-microscopy cryo-em structural-biology image-processing scipion
+Classifier: Development Status :: 5 - Production/Stable
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
+Classifier: Programming Language :: Python :: 3.8
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Topic :: Scientific/Engineering
+License-File: LICENSE.txt
+Requires-Dist: bibtexparser <=1.4.1
+Requires-Dist: psutil <=5.9.6
+Requires-Dist: tkcolorpicker
+Requires-Dist: distro <=1.8
+Requires-Dist: importlib-metadata <=6.8.0
+Requires-Dist: matplotlib ==3.7.3 ; python_version == "3.8"
+Requires-Dist: numpy ==1.24.4 ; python_version == "3.8"
+Requires-Dist: configparser ==6.0.0 ; python_version >= "3.8"
+Requires-Dist: pillow ==10.1.0 ; python_version >= "3.8"
+Requires-Dist: requests ==2.31.0 ; python_version >= "3.8"
+Requires-Dist: matplotlib ==3.8.1 ; python_version >= "3.9"
+Requires-Dist: numpy ==1.26.1 ; python_version >= "3.9"
+
+.. image:: https://img.shields.io/pypi/v/scipion-pyworkflow.svg
+        :target: https://pypi.python.org/pypi/scipion-pyworkflow
+        :alt: PyPI release
+
+.. image:: https://sonarcloud.io/api/project_badges/measure?project=scipion-em_scipion-pyworkflow&metric=alert_status
+        :alt: Quality Gate Status
+        :target: https://sonarcloud.io/summary/new_code?id=scipion-em_scipion-pyworkflow
+
+.. image:: https://img.shields.io/sonar/quality_gate/scipion-em_scipion-pyworkflow?server=https%3A%2F%2Fsonarcloud.io
+        :target: https://sonarcloud.io/dashboard?id=scipion-em_scipion-pyworkflow
+        :alt: SonarCloud quality gate
+
+.. image:: https://img.shields.io/pypi/l/scipion-pyworkflow.svg
+        :target: https://pypi.python.org/pypi/scipion-pyworkflow
+        :alt: License
+
+.. image:: https://img.shields.io/pypi/pyversions/scipion-pyworkflow.svg
+        :target: https://pypi.python.org/pypi/scipion-pyworkflow
+        :alt: Supported Python versions
+
+.. image:: https://img.shields.io/pypi/dm/scipion-pyworkflow
+        :target: https://pypi.python.org/pypi/scipion-pyworkflow
+        :alt: Downloads
+
+.. image:: https://img.shields.io/badge/Contributor%20Covenant-v2.0%20adopted-ff69b4.svg
+        :alt: Contributor Covenant
+        :target: https://www.contributor-covenant.org/version/2/0/code_of_conduct/
+
+pyworkflow
+==========
+
+**pyworkflow** is a simple workflow platform used in scientific applications. It has been initially developed
+within the Scipion framework for image processing in Electron Microscopy.
+ 
+**pyworkflow** allows you to define a working *Domain* by defining the following group of classes:
+
+  * Objects: input/outputs that will be generated by different programs
+  * Protocols: special type of Objects that have defined input parameters and will produce some output
+  * Viewers: Entities that provide graphical analysis of results.
+  * Wizards: Small GUIs that can be develop to help users to select given parameter values.
+
+Development
+-----------
+
+To install **pyworkflow** for development purposes, one can do:
+
+.. code-block:: bash
+
+    # Create a clean virtual environment
+    conda create -n scipion python=3.8
+    conda activate
+    git clone https://github.com/scipion-em/scipion-pyworkflow.git
+    cd scipion-pyworkflow
+    pip install -e .
+
+Running tests
+-------------
+
+.. code-block:: bash
+
+    conda activate scipion
+    cd scipion-pyworkflow
+    export SCIPION_DOMAIN="pyworkflowtests/tests/mock_domain"
+    python -m unittest discover
+
+    # Simple project GUI can be shown after running tests:
+    python pyworkflow/apps/pw_project.py TestProtocolOutputs
+
+All test projects are located in ~/ScipionUserData/Tests/
+
+API documentation
+-----------------
+
+https://scipion-em.github.io/docs/release-3.0.0/api/pyworkflow/pyworkflow.html

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+scipion_pyworkflow-3.7.0.dist-info/RECORD,,

scipion_pyworkflow-3.7.0.dist-info/WHEEL

@@ -0,0 +1,5 @@
+Wheel-Version: 1.0
+Generator: setuptools (72.1.0)
+Root-Is-Purelib: true
+Tag: py3-none-any
+

scipion_pyworkflow-3.7.0.dist-info/dependency_links.txt

@@ -0,0 +1 @@
+git+https://github.com/scipion-em/tkColorPicker#egg=tkcolorpicker # updated 01-2023

scipion_pyworkflow-3.7.0.dist-info/entry_points.txt

@@ -0,0 +1,5 @@
+[console_scripts]
+fix_links = pyworkflow.project.scripts.fix_links:main
+
+[pyworkflow.plugin]
+pyworkflowtests = pyworkflowtests

scipion_pyworkflow-3.7.0.dist-info/top_level.txt

@@ -0,0 +1,2 @@
+pyworkflow
+pyworkflowtests