sciml 0.0.4__py3-none-any.whl → 0.0.6__py3-none-any.whl

sciml/pipelines.py

@@ -1,8 +1,12 @@
 import numpy as np
+import pandas as pd
 from scipy import stats
 from sklearn.metrics import mean_squared_error
 
 def get_metrics(df, truth = 'truth', pred = 'pred', return_dict = False):
+    '''
+    Calculate statistical measures between validation and prediction sequences
+    '''
     df = df[[truth, pred]].copy().dropna()
     slope, intercept, r_value, p_value, std_err = stats.linregress(df.dropna()[truth], df.dropna()[pred])
     r2 = r_value**2
@@ -11,7 +15,7 @@ def get_metrics(df, truth = 'truth', pred = 'pred', return_dict = False):
     mbe = np.mean(df.dropna()[pred] - df.dropna()[truth])
     mae = (df.dropna()[pred] - df.dropna()[truth]).abs().mean()
     if return_dict:
-        return {
+        return pd.DataFrame.from_dict([{
             'R2': r2, 
             'Slope': slope, 
             'RMSE': rmse, 
@@ -20,7 +24,7 @@ def get_metrics(df, truth = 'truth', pred = 'pred', return_dict = False):
             'Intercept': intercept, 
             'p-value': p_value, 
             'std_err': std_err
-        }
+        }])
     else:
         return r2, slope, rmse, mbe, mae, intercept, p_value, std_err
 
@@ -108,19 +112,22 @@ def train_ml(
 
 def test_ml(X_test, y_test, regr):
     res = y_test.copy() # y_test is 2D pandas dataframe.
-    res.columns = ['true']
+    res.columns = ['truth']
     res['pred'] = regr.predict(X_test)
     return res
 
 # ===============================================================================================================================
 # Deep learning neural networks
 
-from tensorflow import keras
-from tensorflow.keras import layers
-from tensorflow.keras import models
-# from keras.layers import Dropout
-from keras.callbacks import EarlyStopping
-from scitbx.stutils import *
+try:
+    from tensorflow import keras
+    from tensorflow.keras import layers
+    from tensorflow.keras import models
+    # from keras.layers import Dropout
+    from keras.callbacks import EarlyStopping
+    from scitbx.stutils import *
+except Exception as e:
+    print(e)
 
 def train_lstm(X_train, y_train, nfeature, ntime, verbose = 2, epochs = 200, batch_size = 64):
     # create and fit the LSTM network

{sciml-0.0.4.dist-info → sciml-0.0.6.dist-info}/METADATA

@@ -1,14 +1,13 @@
-Metadata-Version: 2.1
-Name: sciml
-Version: 0.0.4
-Summary: draw and basic calculations/conversions
-Home-page: https://github.com/soonyenju/sciml
-Author: Songyan Zhu
-Author-email: zhusy93@gmail.com
-License: MIT Licence
-Keywords: Scientific machine learning wrappers
-Platform: any
-License-File: LICENSE
-
-coming soon
-
+Metadata-Version: 2.1
+Name: sciml
+Version: 0.0.6
+Summary: draw and basic calculations/conversions
+Home-page: https://github.com/soonyenju/sciml
+Author: Songyan Zhu
+Author-email: zhusy93@gmail.com
+License: MIT Licence
+Keywords: Scientific machine learning wrappers
+Platform: any
+License-File: LICENSE
+
+coming soon

sciml-0.0.6.dist-info/RECORD

@@ -0,0 +1,8 @@
+sciml/__init__.py,sha256=9Yj8J5bW79Kb3JvoOG8k-AmMv-M5Mn8KLmf-wArsJdo,49
+sciml/pipelines.py,sha256=lAGtLwp6JKO6aBUZ0ka8VrA013QVDRmAlHG9dQnxY88,5424
+sciml/utils.py,sha256=qCdABaTUu3K0R269jI7D_8SO6AqEjphg03CzdxCJR2k,1876
+sciml-0.0.6.dist-info/LICENSE,sha256=hcunSTJmVgRcUNOa1rKl8axtY3Jsy2B4wXDYtQsrAt0,1081
+sciml-0.0.6.dist-info/METADATA,sha256=PHJ68gGZvR-leW-QCRW_-ZsnHNycM1Kvd4MA_YJKtsU,326
+sciml-0.0.6.dist-info/WHEEL,sha256=yQN5g4mg4AybRjkgi-9yy4iQEFibGQmlz78Pik5Or-A,92
+sciml-0.0.6.dist-info/top_level.txt,sha256=dS_7aBCZFKQE3myPy5sh4USjQZCZyGg382-YxUUYcdw,6
+sciml-0.0.6.dist-info/RECORD,,

{sciml-0.0.4.dist-info → sciml-0.0.6.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.37.0)
+Generator: bdist_wheel (0.41.2)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

sciml-0.0.4.dist-info/RECORD

@@ -1,8 +0,0 @@
-sciml/__init__.py,sha256=9Yj8J5bW79Kb3JvoOG8k-AmMv-M5Mn8KLmf-wArsJdo,49
-sciml/pipelines.py,sha256=pi8bNCNSHqe7JVErSsT8l5qnpggeGj1HuhfdWCh9t18,5210
-sciml/utils.py,sha256=qCdABaTUu3K0R269jI7D_8SO6AqEjphg03CzdxCJR2k,1876
-sciml-0.0.4.dist-info/LICENSE,sha256=hcunSTJmVgRcUNOa1rKl8axtY3Jsy2B4wXDYtQsrAt0,1081
-sciml-0.0.4.dist-info/METADATA,sha256=mhvizQNbQxKzI1LSlvzIoAeo_cTAhp5Ti0fpAWlwY6k,314
-sciml-0.0.4.dist-info/WHEEL,sha256=ewwEueio1C2XeHTvT17n8dZUJgOvyCWCt0WVNLClP9o,92
-sciml-0.0.4.dist-info/top_level.txt,sha256=dS_7aBCZFKQE3myPy5sh4USjQZCZyGg382-YxUUYcdw,6
-sciml-0.0.4.dist-info/RECORD,,