scikit-network 0.32.1__cp39-cp39-win_amd64.whl → 0.33.1__cp39-cp39-win_amd64.whl
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- {scikit_network-0.32.1.dist-info → scikit_network-0.33.1.dist-info}/AUTHORS.rst +0 -1
- scikit_network-0.33.1.dist-info/METADATA +120 -0
- {scikit_network-0.32.1.dist-info → scikit_network-0.33.1.dist-info}/RECORD +66 -66
- {scikit_network-0.32.1.dist-info → scikit_network-0.33.1.dist-info}/WHEEL +1 -1
- sknetwork/__init__.py +1 -1
- sknetwork/classification/diffusion.py +4 -3
- sknetwork/classification/knn.py +4 -3
- sknetwork/classification/metrics.py +3 -3
- sknetwork/classification/pagerank.py +1 -1
- sknetwork/classification/propagation.py +7 -6
- sknetwork/classification/vote.cp39-win_amd64.pyd +0 -0
- sknetwork/classification/vote.cpp +684 -677
- sknetwork/clustering/leiden.py +2 -1
- sknetwork/clustering/leiden_core.cp39-win_amd64.pyd +0 -0
- sknetwork/clustering/leiden_core.cpp +713 -702
- sknetwork/clustering/louvain.py +6 -6
- sknetwork/clustering/louvain_core.cp39-win_amd64.pyd +0 -0
- sknetwork/clustering/louvain_core.cpp +713 -702
- sknetwork/clustering/metrics.py +1 -1
- sknetwork/clustering/tests/test_kcenters.py +5 -37
- sknetwork/clustering/tests/test_louvain.py +6 -0
- sknetwork/data/__init__.py +1 -1
- sknetwork/data/base.py +7 -2
- sknetwork/data/load.py +18 -21
- sknetwork/data/models.py +15 -15
- sknetwork/data/parse.py +19 -17
- sknetwork/data/tests/test_API.py +3 -3
- sknetwork/data/tests/test_base.py +2 -2
- sknetwork/data/tests/test_toy_graphs.py +33 -33
- sknetwork/data/toy_graphs.py +35 -43
- sknetwork/embedding/base.py +3 -0
- sknetwork/embedding/louvain_embedding.py +0 -26
- sknetwork/embedding/svd.py +0 -4
- sknetwork/embedding/tests/test_louvain_embedding.py +9 -4
- sknetwork/embedding/tests/test_svd.py +6 -0
- sknetwork/gnn/gnn_classifier.py +1 -1
- sknetwork/hierarchy/louvain_hierarchy.py +10 -6
- sknetwork/hierarchy/metrics.py +3 -3
- sknetwork/hierarchy/paris.cp39-win_amd64.pyd +0 -0
- sknetwork/hierarchy/paris.cpp +2651 -2027
- sknetwork/hierarchy/paris.pyx +4 -3
- sknetwork/hierarchy/tests/test_metrics.py +4 -4
- sknetwork/linalg/diteration.cp39-win_amd64.pyd +0 -0
- sknetwork/linalg/diteration.cpp +684 -677
- sknetwork/linalg/push.cp39-win_amd64.pyd +0 -0
- sknetwork/linalg/push.cpp +1769 -1153
- sknetwork/linalg/sparse_lowrank.py +1 -1
- sknetwork/ranking/betweenness.cp39-win_amd64.pyd +0 -0
- sknetwork/ranking/betweenness.cpp +563 -557
- sknetwork/regression/diffusion.py +6 -4
- sknetwork/topology/cliques.cp39-win_amd64.pyd +0 -0
- sknetwork/topology/cliques.cpp +1729 -1110
- sknetwork/topology/core.cp39-win_amd64.pyd +0 -0
- sknetwork/topology/core.cpp +1755 -1139
- sknetwork/topology/cycles.py +1 -1
- sknetwork/topology/minheap.cp39-win_amd64.pyd +0 -0
- sknetwork/topology/minheap.cpp +687 -677
- sknetwork/topology/triangles.cp39-win_amd64.pyd +0 -0
- sknetwork/topology/triangles.cpp +437 -432
- sknetwork/topology/weisfeiler_lehman_core.cp39-win_amd64.pyd +0 -0
- sknetwork/topology/weisfeiler_lehman_core.cpp +684 -677
- sknetwork/utils/__init__.py +1 -1
- sknetwork/utils/values.py +5 -3
- sknetwork/visualization/graphs.py +1 -1
- scikit_network-0.32.1.dist-info/METADATA +0 -511
- {scikit_network-0.32.1.dist-info → scikit_network-0.33.1.dist-info}/LICENSE +0 -0
- {scikit_network-0.32.1.dist-info → scikit_network-0.33.1.dist-info}/top_level.txt +0 -0
sknetwork/clustering/louvain.py
CHANGED
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@@ -14,8 +14,8 @@ from scipy import sparse
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from sknetwork.clustering.base import BaseClustering
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from sknetwork.clustering.louvain_core import optimize_core
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from sknetwork.clustering.postprocess import reindex_labels
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from sknetwork.utils.check import check_random_state, get_probs
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from sknetwork.utils.format import
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from sknetwork.utils.check import check_format, check_random_state, get_probs
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from sknetwork.utils.format import get_adjacency, directed2undirected
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from sknetwork.utils.membership import get_membership
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from sknetwork.log import Log
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@@ -131,9 +131,9 @@ class Louvain(BaseClustering, Log):
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increase :
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Gain in modularity after optimization.
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"""
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labels = labels.astype(np.
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indices = adjacency.indices
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indptr = adjacency.indptr
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labels = labels.astype(np.int64)
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indices = adjacency.indices.astype(np.int64)
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indptr = adjacency.indptr.astype(np.int64)
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data = adjacency.data.astype(np.float32)
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out_weights = out_weights.astype(np.float32)
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in_weights = in_weights.astype(np.float32)
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@@ -193,7 +193,6 @@ class Louvain(BaseClustering, Log):
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self._init_vars()
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# adjacency matrix
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input_matrix = check_format(input_matrix)
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force_directed = self.modularity == 'dugue'
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adjacency, self.bipartite = get_adjacency(input_matrix, force_directed=force_directed,
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force_bipartite=force_bipartite)
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@@ -266,6 +265,7 @@ class Louvain(BaseClustering, Log):
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-------
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self : :class:`Louvain`
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"""
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input_matrix = check_format(input_matrix)
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adjacency, out_weights, in_weights, membership, index = self._pre_processing(input_matrix, force_bipartite)
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n = adjacency.shape[0]
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count = 0
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Binary file
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