scikit-network 0.32.1__cp311-cp311-win_amd64.whl → 0.33.0__cp311-cp311-win_amd64.whl

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  1. {scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/AUTHORS.rst +0 -1
  2. {scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/METADATA +9 -3
  3. {scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/RECORD +60 -60
  4. {scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/WHEEL +1 -1
  5. sknetwork/__init__.py +1 -1
  6. sknetwork/classification/diffusion.py +4 -3
  7. sknetwork/classification/knn.py +4 -3
  8. sknetwork/classification/metrics.py +3 -3
  9. sknetwork/classification/propagation.py +6 -5
  10. sknetwork/classification/vote.cp311-win_amd64.pyd +0 -0
  11. sknetwork/classification/vote.cpp +1 -1
  12. sknetwork/clustering/leiden.py +2 -1
  13. sknetwork/clustering/leiden_core.cp311-win_amd64.pyd +0 -0
  14. sknetwork/clustering/leiden_core.cpp +1 -1
  15. sknetwork/clustering/louvain.py +3 -3
  16. sknetwork/clustering/louvain_core.cp311-win_amd64.pyd +0 -0
  17. sknetwork/clustering/louvain_core.cpp +1 -1
  18. sknetwork/clustering/tests/test_kcenters.py +5 -37
  19. sknetwork/data/__init__.py +1 -1
  20. sknetwork/data/base.py +7 -2
  21. sknetwork/data/load.py +18 -21
  22. sknetwork/data/models.py +15 -15
  23. sknetwork/data/parse.py +19 -17
  24. sknetwork/data/tests/test_API.py +3 -3
  25. sknetwork/data/tests/test_base.py +2 -2
  26. sknetwork/data/tests/test_toy_graphs.py +33 -33
  27. sknetwork/data/toy_graphs.py +35 -43
  28. sknetwork/embedding/base.py +3 -0
  29. sknetwork/embedding/louvain_embedding.py +0 -26
  30. sknetwork/embedding/svd.py +0 -4
  31. sknetwork/embedding/tests/test_louvain_embedding.py +9 -4
  32. sknetwork/embedding/tests/test_svd.py +6 -0
  33. sknetwork/gnn/gnn_classifier.py +1 -1
  34. sknetwork/hierarchy/louvain_hierarchy.py +10 -6
  35. sknetwork/hierarchy/paris.cp311-win_amd64.pyd +0 -0
  36. sknetwork/hierarchy/paris.cpp +757 -755
  37. sknetwork/hierarchy/paris.pyx +4 -3
  38. sknetwork/hierarchy/tests/test_metrics.py +4 -4
  39. sknetwork/linalg/diteration.cp311-win_amd64.pyd +0 -0
  40. sknetwork/linalg/diteration.cpp +1 -1
  41. sknetwork/linalg/push.cp311-win_amd64.pyd +0 -0
  42. sknetwork/linalg/push.cpp +123 -123
  43. sknetwork/ranking/betweenness.cp311-win_amd64.pyd +0 -0
  44. sknetwork/ranking/betweenness.cpp +1 -1
  45. sknetwork/regression/diffusion.py +6 -4
  46. sknetwork/topology/cliques.cp311-win_amd64.pyd +0 -0
  47. sknetwork/topology/cliques.cpp +123 -123
  48. sknetwork/topology/core.cp311-win_amd64.pyd +0 -0
  49. sknetwork/topology/core.cpp +123 -123
  50. sknetwork/topology/minheap.cp311-win_amd64.pyd +0 -0
  51. sknetwork/topology/minheap.cpp +1 -1
  52. sknetwork/topology/triangles.cp311-win_amd64.pyd +0 -0
  53. sknetwork/topology/triangles.cpp +1 -1
  54. sknetwork/topology/weisfeiler_lehman_core.cp311-win_amd64.pyd +0 -0
  55. sknetwork/topology/weisfeiler_lehman_core.cpp +1 -1
  56. sknetwork/utils/__init__.py +1 -1
  57. sknetwork/utils/values.py +5 -3
  58. sknetwork/visualization/graphs.py +1 -1
  59. {scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/LICENSE +0 -0
  60. {scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/top_level.txt +0 -0
sknetwork/topology/minheap.cpp CHANGED
@@ -8,7 +8,7 @@
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  "/d2FH4-"
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  ],
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  "include_dirs": [
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- "C:\\Users\\runneradmin\\AppData\\Local\\Temp\\cibw-run-8iubbrn2\\cp311-win_amd64\\build\\venv\\Lib\\site-packages\\numpy\\core\\include"
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+ "C:\\Users\\runneradmin\\AppData\\Local\\Temp\\cibw-run-2jqincfh\\cp311-win_amd64\\build\\venv\\Lib\\site-packages\\numpy\\core\\include"
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  ],
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  "language": "c++",
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  "name": "sknetwork.topology.minheap",
sknetwork/topology/triangles.cpp CHANGED
@@ -8,7 +8,7 @@
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  "/d2FH4-"
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  ],
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  "include_dirs": [
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- "C:\\Users\\runneradmin\\AppData\\Local\\Temp\\cibw-run-8iubbrn2\\cp311-win_amd64\\build\\venv\\Lib\\site-packages\\numpy\\core\\include"
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+ "C:\\Users\\runneradmin\\AppData\\Local\\Temp\\cibw-run-2jqincfh\\cp311-win_amd64\\build\\venv\\Lib\\site-packages\\numpy\\core\\include"
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  ],
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  "language": "c++",
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  "name": "sknetwork.topology.triangles",
sknetwork/topology/weisfeiler_lehman_core.cpp CHANGED
@@ -8,7 +8,7 @@
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  "/d2FH4-"
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  ],
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  "include_dirs": [
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- "C:\\Users\\runneradmin\\AppData\\Local\\Temp\\cibw-run-8iubbrn2\\cp311-win_amd64\\build\\venv\\Lib\\site-packages\\numpy\\core\\include"
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+ "C:\\Users\\runneradmin\\AppData\\Local\\Temp\\cibw-run-2jqincfh\\cp311-win_amd64\\build\\venv\\Lib\\site-packages\\numpy\\core\\include"
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  ],
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  "language": "c++",
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  "name": "sknetwork.topology.weisfeiler_lehman_core",
sknetwork/utils/__init__.py CHANGED
@@ -1,5 +1,5 @@
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  """utils module"""
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- from sknetwork.data import Bunch
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+ from sknetwork.data import *
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  from sknetwork.utils.check import is_symmetric
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  from sknetwork.utils.format import *
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  from sknetwork.utils.membership import get_membership, from_membership
sknetwork/utils/values.py CHANGED
@@ -10,9 +10,11 @@ from typing import Optional, Union
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  import numpy as np
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- def get_values(shape: tuple, values: Union[np.ndarray, dict], default_value: float = -1) -> np.ndarray:
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+ def get_values(shape: tuple, values: Union[np.ndarray, list, dict], default_value: float = -1) -> np.ndarray:
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  """Get values as array."""
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  n = shape[0]
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+ if isinstance(values, list):
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+ values = np.array(values)
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  if isinstance(values, np.ndarray):
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  if len(values) != n:
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  raise ValueError('Dimensions mismatch between adjacency and values.')
@@ -29,8 +31,8 @@ def get_values(shape: tuple, values: Union[np.ndarray, dict], default_value: flo
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  return values
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- def stack_values(shape: tuple, values_row: Optional[Union[np.ndarray, dict]],
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- values_col: Optional[Union[np.ndarray, dict]] = None, default_value: float = -1) -> np.ndarray:
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+ def stack_values(shape: tuple, values_row: Optional[Union[np.ndarray, list, dict]],
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+ values_col: Optional[Union[np.ndarray, list, dict]] = None, default_value: float = -1) -> np.ndarray:
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  """Process values for rows and columns and stack the results into a single vector."""
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  n_row, n_col = shape
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  if values_row is None and values_col is None:
sknetwork/visualization/graphs.py CHANGED
@@ -368,7 +368,7 @@ def visualize_graph(adjacency: Optional[sparse.csr_matrix] = None, position: Opt
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  node_width: float = 1, node_width_max: float = 3, node_color: str = 'gray',
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  display_edges: bool = True, edge_labels: Optional[list] = None,
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  edge_width: float = 1, edge_width_min: float = 0.5,
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- edge_width_max: float = 20, display_edge_weight: bool = True,
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+ edge_width_max: float = 20, display_edge_weight: bool = False,
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  edge_color: Optional[str] = None, label_colors: Optional[Iterable] = None,
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  font_size: int = 12, directed: Optional[bool] = None, filename: Optional[str] = None) -> str:
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  """Return the image of a graph in SVG format.