scikit-network 0.32.1__cp311-cp311-macosx_11_0_arm64.whl → 0.33.0__cp311-cp311-macosx_11_0_arm64.whl

{scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/AUTHORS.rst

@@ -13,7 +13,6 @@ Development Lead
 * Simon Delarue <simon.delarue@telecom-paris.fr>
 * Marc Jeanmougin <marc.jeanmougin@telecom-paris.fr>
 
-
 Former lead
 -----------
 

{scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: scikit-network
-Version: 0.32.1
+Version: 0.33.0
 Summary: Graph algorithms
 Home-page: https://github.com/sknetwork-team/scikit-network
 Author: Scikit-network team
@@ -15,11 +15,11 @@ Classifier: Intended Audience :: Science/Research
 Classifier: License :: OSI Approved :: BSD License
 Classifier: Natural Language :: English
 Classifier: Programming Language :: Cython
-Classifier: Programming Language :: Python :: 3.8
 Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
-Requires-Python: >=3.8
+Classifier: Programming Language :: Python :: 3.12
+Requires-Python: >=3.9
 Description-Content-Type: text/x-rst
 License-File: LICENSE
 License-File: AUTHORS.rst
@@ -118,6 +118,12 @@ the `Journal of Machine Learning Research <https://jmlr.org>`_:
 History
 =======
 
+0.33.0 (2024-07-16)
+-------------------
+
+* Add Python 3.12
+* Drop Python 3.8
+
 0.32.1 (2024-04-02)
 -------------------
 

{scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/RECORD

@@ -1,25 +1,19 @@
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 sknetwork/log.py,sha256=ORInAVh_cWIfxwaFWSblSRxwT-jG05XPRnYTTAHSKy4,443
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 sknetwork/test_log.py,sha256=V4t6Ggi_fh8px5Iq7CDLlJvbXfz24macQ43Ss0tPb5I,319
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 sknetwork/classification/vote.pyx,sha256=Bbf74XCPH8uYDP-SrXRaA7k6Ax2x-wDzpbHMeg9le7A,1584
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 sknetwork/classification/__init__.py,sha256=yVv7wSuUfNLxeNBF-AhWCJys3C-XatPtMzi1wyp9Bz4,475
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 sknetwork/classification/base_rank.py,sha256=RGElYD6PuP4nhnenNnzpOiBojs49Afg5ahjBFEi566I,4522
-sknetwork/classification/propagation.py,sha256=TqTNqnuZjelX3A7Ghw3M6k8u9fOh-Ag_eBh6FN0f5gI,5754
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 sknetwork/classification/pagerank.py,sha256=CBUeCqZisr6s5lh3VXYWA6rbiPdLyNzuSMbjazy80eA,2586
 sknetwork/classification/base.py,sha256=WS-QHh4553Dr1VwJqjggSqO6hHFIAs50oPah_L23eFo,4290
-sknetwork/classification/knn.py,sha256=7tiXPNOzRLPCAoELXWtqXdnPUIIDqtGdku3r1KGiE8Q,5306
+sknetwork/classification/knn.py,sha256=fLRZF2jhHq105QHMeW328JcF71wTaGP-ukmbJdyiw44,5333
 sknetwork/classification/tests/test_metrics.py,sha256=eBs-5uAEz2s8gukMyfhQ07GSFoyvxtsslLuc6VgUxBU,2303
 sknetwork/classification/tests/__init__.py,sha256=sy9uRiPhYG2i7uqM3P07-VUf4UcZEHeOoH9BvKCpU3s,31
 sknetwork/classification/tests/test_pagerank.py,sha256=5IJpYqnz31cWT0iXjTdo1xE8Kfj3YTK0cSZnnTlyJBs,620
@@ -29,26 +23,26 @@ sknetwork/classification/tests/test_API.py,sha256=FA1d0NQz3vaNVVeFbhEljPe0fD_ryR
 sknetwork/classification/tests/test_propagation.py,sha256=m0Jyq59k3taoikyBxcZGILzG7dWQV3SGE45MPm0RPao,850
 sknetwork/visualization/dendrograms.py,sha256=m4FbBfvJUW_gXccZWF8OWxAsbhsEcKa1fXNNCp_y4MA,9901
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-sknetwork/visualization/graphs.py,sha256=7iNHW3NJ7kxLw2y3SoEY_rmyCfmxLPmi0tCJ2dkS3q0,41175
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 sknetwork/visualization/colors.py,sha256=DjcXt9aMgLan7bRg7TZI8m_8SLWQOZ-g2HoguB1-3qA,2509
 sknetwork/visualization/tests/test_graphs.py,sha256=g2YPJn9m8wD-UHZ_BL37xuJqE7ygOx3EztKLVVqphYk,9421
 sknetwork/visualization/tests/__init__.py,sha256=yOVrqUD9UuI_HdYuqRP5PS7QhS-pO4RE_Ls5PLiIC_w,30
 sknetwork/visualization/tests/test_dendrograms.py,sha256=UuS3VZ5XnV1u5BtW-QKbFv0wavllQpbgtsOIe5XvTlg,2466
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 sknetwork/topology/weisfeiler_lehman_core.pyx,sha256=fi0rRrXHVZuIQYzPDcPCamCRQLKquchjV3N9dNuQ1Pk,3034
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-sknetwork/topology/triangles.cpython-311-darwin.so,sha256=D6Lxxdx5moJoZuRkejJ-BQnl52ETeJp70Quv4twE5kQ,108732
-sknetwork/topology/weisfeiler_lehman_core.cpython-311-darwin.so,sha256=YYX83I_L09T1uK0BrcongNUz03ftLvADq76eQ_pKF7w,222329
+sknetwork/topology/triangles.cpython-311-darwin.so,sha256=aJ3ez12lZaQRZDg9vZRBo2Zz2xoZu0XZcAjU2w_mrlM,106224
+sknetwork/topology/weisfeiler_lehman_core.cpython-311-darwin.so,sha256=dW9JH4XfiR0OBI751HxwenawSjNbDNrcdeTQDtn3DAs,214144
 sknetwork/topology/tests/test_cycles.py,sha256=KZzMKS5ILfC_J0Fj5MFlEOL7Z9nOnlRfo4TnGdXEPWY,3150
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 sknetwork/topology/tests/test_wl.py,sha256=EJY_4xTi_-qzFsqZJkgnwLteoakdkpRAczzdMCGeXe0,2218
@@ -59,7 +53,7 @@ sknetwork/topology/tests/test_cliques.py,sha256=t97pKDMxT9RC-_YsgY-c8tQxrekyAE6i
 sknetwork/ranking/postprocess.py,sha256=-3wqBPvTM7jDdfTytINEXxM2eugJjbCZRLiLy9pkmac,919
 sknetwork/ranking/__init__.py,sha256=UeYw8y0HFoBnPziqnVYXSt8jqFtkDgkCCMPhYTEIaF0,348
 sknetwork/ranking/closeness.py,sha256=pETMD8uaXfADZhmzVaH4YIGX57S2vvhzVInONaAwBUM,2840
-sknetwork/ranking/betweenness.cpython-311-darwin.so,sha256=OlyOVsNmIwqEuYtJOyx-vX9ADR2bzilZQCIEeD5PYgw,130206
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 sknetwork/ranking/katz.py,sha256=uPyXkEL73_6MS4dP5XTSVSIrD5h5QJipVTVEa0L_y48,2535
 sknetwork/ranking/hits.py,sha256=L39a9Ze3ITUbikmNhA_Lx-V5s_RQr0XnNkOsIgG8m98,2761
 sknetwork/ranking/pagerank.py,sha256=Qt2SOUoLO76JVDnT4-x-b-hah9IlaHECsYNu45AnpY8,4749
@@ -73,13 +67,13 @@ sknetwork/ranking/tests/test_API.py,sha256=PZ4Q5X1WT1HSAojZX72fUm4o9Y0PwocewJEoC
 sknetwork/ranking/tests/test_betweenness.py,sha256=8XA1ycLQQ7-Cm3CBfkcSDQOvD6xagAIP1--mPe9VFzo,1135
 sknetwork/ranking/tests/test_hits.py,sha256=zStzrWZ-pv2Nsd-pB282FgW3KAn1TyKjz_l85tJaPJ0,491
 sknetwork/linalg/diteration.pyx,sha256=gk9W6SwIxXgmjQujXWBUIoM_OwevjE3jTzFrIEkGnWI,1384
-sknetwork/linalg/diteration.cpython-311-darwin.so,sha256=okw_M2kJc-yVAqDXklCTDFYX2MjeV5fv7Fp6J02xnKw,217117
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 sknetwork/linalg/__init__.py,sha256=awBDY2wWiO40L5eED3H8K1BM8qtHz7aQRv1p3PcSK94,533
 sknetwork/linalg/laplacian.py,sha256=_gQr8YLqMUtK_IMNgvJoQX7-uODVlvCVmc-oTsgw7MA,401
 sknetwork/linalg/eig_solver.py,sha256=yq_prP5p1jbALby69wkzzH0vYKc1btmRQoiVUtTh-eA,2700
 sknetwork/linalg/push.pyx,sha256=caxCZa5h9zsHhxJgDBaaetqpB0wUbFLdOUwHwj0q_t0,2358
 sknetwork/linalg/ppr_solver.py,sha256=mQkCnik-vvv_oFa9n1vtMzxgvi78qW-QQONdcmC9CXA,6533
-sknetwork/linalg/push.cpython-311-darwin.so,sha256=-eE4UmKRu0ata8NGLwvZZdRTV7c6YpXoQc39cFJiRG4,237831
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 sknetwork/linalg/sparse_lowrank.py,sha256=LUhbqa01p51SYhoIb2Dmx2b9fMc-iOu69CAVHscR2Xs,5028
 sknetwork/linalg/basics.py,sha256=8AFph_1G5SZP_24jrIv6qIWooO0UMglL4jMgx3ZdYIQ,1142
 sknetwork/linalg/normalizer.py,sha256=kOFDPPdiGqG-KcWNiRwbS_y_nmw5fTKYTvuj_x8yBd0,2473
@@ -96,14 +90,14 @@ sknetwork/linalg/tests/test_laplacian.py,sha256=B6UhJOmYUdNlXwNoxLLtb--nv9mx96Or
 sknetwork/linalg/tests/test_eig.py,sha256=lUAgo4UfWuuSG5DhSk5SIT7ToLDgPG-5JCgmOe_M7Vw,1504
 sknetwork/linalg/tests/test_normalization.py,sha256=nASuMYxKcsWj3gk9DF5uPKYOw93oJ-UQUWi99Fw3kmE,887
 sknetwork/hierarchy/metrics.py,sha256=_wYGKx_VDE_sfbg-uUEFMhOjSLFqzC8rFHjJo1hdVL8,8046
-sknetwork/hierarchy/paris.pyx,sha256=10Fu048FPklcgYiLmMKWpRW87UY04ubU0NpjESTOsLA,11683
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 sknetwork/hierarchy/postprocess.py,sha256=d1Fll3eqDIjiMf1c5nGuKF6I0fN93elnglkp59LARGU,12072
 sknetwork/hierarchy/__init__.py,sha256=YgE2eqnwS8Q2NWP9pNY-M1bpdxRn5-C-CdykydNW7iM,412
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 sknetwork/hierarchy/base.py,sha256=MoxBiSsEJOq77YmXj_bpf4vUiPLSpQn8fnUX7YIqyd8,2693
 sknetwork/hierarchy/tests/test_postprocess.py,sha256=OSrWE0gT0AcPI4LKmUL-Blfg5ErxnjS3d4rPNnA63_Y,2209
-sknetwork/hierarchy/tests/test_metrics.py,sha256=UydXtXgGud9MgTKT4l_j7BplKToO2cQKuoGvkBPirAw,3160
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 sknetwork/hierarchy/tests/test_algos.py,sha256=xMt2xzAYEm6MuK-8OKOqBwZS89aJspX2tr7T6QMHz6E,1361
 sknetwork/hierarchy/tests/test_API.py,sha256=tLF-jLsfM2OFqbyVHK1o9jXVW_1PbTkMcxkAXuGjMO8,720
@@ -119,34 +113,34 @@ sknetwork/path/tests/__init__.py,sha256=_COAjci7RJ_XtBDGwy5aOgZ9dPSQH3j7d6qMlLHs
 sknetwork/path/tests/test_distances.py,sha256=zItygI9cLMrQonLhOubvorElU5qaZumFfjMethx4rDw,2695
 sknetwork/embedding/random_projection.py,sha256=NuJoPHYLjdb8dUdKOwGr7Q6lGZBSPbwmMuuY6CRzgoI,5002
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 sknetwork/embedding/force_atlas.py,sha256=amYr0E08F8TDoIxjPx3lx35JFwEP41jc4KKed1PQeZs,7452
 sknetwork/embedding/spring.py,sha256=5fyHQzmIp8gY9DdI-DFvMc37mjMb64bs22ZZZ9YFDXM,7151
 sknetwork/embedding/spectral.py,sha256=ds91hH6JFBsfLcTS8QEz-gP5tZUcrrGqjfnL-xMIdU0,5548
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 sknetwork/clustering/leiden_core.pyx,sha256=7HGdeX6iMnSs52Px44-__kN9JhHueaQUvCmrkIGTalg,4300
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+sknetwork/clustering/leiden.py,sha256=yL5N-9ny6XAj6La2-PBcsieRl4SVx8wxwVGvS1tMr-o,9682
 sknetwork/clustering/postprocess.py,sha256=4hx5VTQmqS2Ld2P2kvXoyvVanXVg3bMA619IHS2jWHM,2039
 sknetwork/clustering/__init__.py,sha256=Ab-rmioxlaMoghrzd1RMr-L4zyrqIM8XznqrjBPGE28,435
 sknetwork/clustering/kcenters.py,sha256=RFEx35vPUm9a4mzCbDwv-PmePCsdQwbuKAeaRizBMxY,8689
-sknetwork/clustering/louvain.py,sha256=1mGcmy_Fd97V6bDmZb2Aa4JziCusru-gFHv5Vdxfm_0,10791
+sknetwork/clustering/louvain.py,sha256=nFKEsrEuOH2k9iruT7SGo0kGDtcYzW2Xn7wBAxe767o,10825
 sknetwork/clustering/propagation_clustering.py,sha256=ABZZtyojkrXfzsMwEcxqphzHgFC5q8sECOyanvK9D3o,3781
-sknetwork/clustering/louvain_core.cpython-311-darwin.so,sha256=LPjTq2Gp-UXhHzqTzH14MCJALpT2xmpWBPXRvr0rSjg,260559
+sknetwork/clustering/louvain_core.cpython-311-darwin.so,sha256=ljPJQ8zm24t8JjH-OJsi8CsIdUcYt8FFvtTRLUKOS54,250336
 sknetwork/clustering/louvain_core.pyx,sha256=pMqt7WukTkBOpjofmiXMYHqRX69mkquEMapDdoskiQM,4089
 sknetwork/clustering/base.py,sha256=dCF4K3nbKY24kzFeDAy7Fp-b9jDBzEoG3jj1ozuu_W8,5932
 sknetwork/clustering/tests/test_postprocess.py,sha256=WSmAlqB-6Nw3eoL3NaOyNlpPr7GVnNnllkPVdyE9rXI,1378
-sknetwork/clustering/tests/test_kcenters.py,sha256=3euzkt79tPZul5rP_HuJZHXydUdqT-Xk5N01qWOuaks,3477
+sknetwork/clustering/tests/test_kcenters.py,sha256=laO1QSJ-yGlroB5XtrC15jbRK0krYZK5sIRDHBUZL30,1977
 sknetwork/clustering/tests/test_metrics.py,sha256=fbVYg2s8DXQdiYHUNuVjFMtEJg4od1Vej25mgHhGDu0,1818
 sknetwork/clustering/tests/__init__.py,sha256=Ta0XKY7pklRvHyUY3Jlow3A2V4REa5geZG74xPz80Tc,27
 sknetwork/clustering/tests/test_leiden.py,sha256=3KSXvxUP9H4tCJQXUfWt-45-ltyD0FrVgYjXDvRN-yQ,1155
@@ -157,10 +151,10 @@ sknetwork/linkpred/__init__.py,sha256=pFtM52OhDK69ceeiRyH1MDse0EbD8fqyhOsWWih47g
 sknetwork/linkpred/base.py,sha256=aXgWqajDYjDE-YQcooI6j0qEByJxHQiQtSjmFiID3Qk,995
 sknetwork/linkpred/tests/__init__.py,sha256=05sK8Ihh9Gi2_uobPC_ErMVE4KOt0761NzzV_vJh15U,32
 sknetwork/linkpred/tests/test_nn.py,sha256=T79txY2DlPgnI4JqzC88EcwCobJiM9P9v_5_ZvBTDeU,983
-sknetwork/utils/values.py,sha256=UK6wck_frtPz0Q6hRugpUMNg6AARcBQ0_MIlG5CyAkc,2510
+sknetwork/utils/values.py,sha256=E-_gcqVOYjUPiG_iz9j2avVh1ENANVIZt7AydYzyeyg,2595
 sknetwork/utils/check.py,sha256=tNOelam8GGdVjMzmk-7otNTyFBgJNKwq1z-zWmHOb9Y,12940
 sknetwork/utils/neighbors.py,sha256=XNqwPM_PPpf_x-YhjEMVZJDxmazrVw9Eky3hNv9IGz0,3351
-sknetwork/utils/__init__.py,sha256=FX-906qqZsXt9Q2nZdd3JT4rM0Aj39bc2O0wDpp_q-0,329
+sknetwork/utils/__init__.py,sha256=z1kLaO6ZFBg9g3MoeuxV-6UPmcqKAxTs0fjqoYQOgc4,325
 sknetwork/utils/format.py,sha256=qAa5jmp_fkQBlVL4LW14N7rrMPNk3yMApNFLxREPuiU,8766
 sknetwork/utils/membership.py,sha256=dG2xJTWEjRcxyKTs5A7DFyNhO50-7UKpBIaWFfmyH_M,2162
 sknetwork/utils/tfidf.py,sha256=C1qZCwZSwypi-C_II9D7lkfyxsOFefiDopTO3pBEwkc,956
@@ -178,7 +172,7 @@ sknetwork/gnn/loss.py,sha256=P0un3iqbnFLrBbYODznVAoU_J2qAZuqHAPLiae0LCtI,5162
 sknetwork/gnn/activation.py,sha256=D7o4FdbDMrBa2PQrWrvplCf14QOSzZ67d9eWN9bHY-M,3560
 sknetwork/gnn/neighbor_sampler.py,sha256=TXdMRFwiT8sOdl6-S-flQZ5Rjrx1hwTzFqqiR_8PHTQ,1864
 sknetwork/gnn/utils.py,sha256=A0kuBe29Eg90cEzRAgw4YmnShnzoq6ai_-01IBAf63g,4349
-sknetwork/gnn/gnn_classifier.py,sha256=wSZQXjRu9ou9cEqcOXPD4gY_vKOYeC8iWXj6j1-uFrM,12613
+sknetwork/gnn/gnn_classifier.py,sha256=yvh5P3T3AmpEI8xNBERSkLumifBzz6gRLgQQ5aaASd0,12610
 sknetwork/gnn/layer.py,sha256=i0XiAutNal9ImAGqMtSLVEq_QiqZoGAlAWwlSGrNY8Q,5526
 sknetwork/gnn/optimizer.py,sha256=vsCgfPoJtYMWREnR4tBsfPb0Ed-rHR0poBr-75lE57s,5782
 sknetwork/gnn/base.py,sha256=QZ_pNi2-edAUpu-2C93DWfooS_sHulO6HL6vK108lhc,5708
@@ -192,25 +186,31 @@ sknetwork/gnn/tests/test_neigh_sampler.py,sha256=zc_6G3JhZvKrFLJAk2UJSOHZwN7sGoj
 sknetwork/gnn/tests/test_base_layer.py,sha256=1PXvS3338vu-fI77ZnGgHfY20zkPRv_GcZKxLQmyj7I,1381
 sknetwork/gnn/tests/test_loss.py,sha256=W5DA6FRd-OppeRKFgj2gtLqNvjkXkCQPmV6lg3ENu-c,1045
 sknetwork/gnn/tests/test_base.py,sha256=HVsz5zABud8ZlrIJIFuAKP6N7mu2ClrTaleZbPhGOR0,3393
-sknetwork/regression/diffusion.py,sha256=dV-uPGEaBLpI_sY6pl52rkKeSDQV9MZsQfSo1frYKbc,7845
+sknetwork/regression/diffusion.py,sha256=p4o62jxuz3z3Kd2WizmV1GYM9MO_c3yp70_KQUim0jM,7905
 sknetwork/regression/__init__.py,sha256=nRlbcR8bA2Lz-OmLPMIPhBzgDCol8oSA19qL3IninXA,141
 sknetwork/regression/base.py,sha256=KIsVpnbACRH4h5W3ifMJOTlZNuztGbQP1QbZKj5aj_0,1496
 sknetwork/regression/tests/__init__.py,sha256=BT8kCCMN_pv7znhIR5GSQ_XxU5brmrCYDwm4QJNRCV0,27
 sknetwork/regression/tests/test_diffusion.py,sha256=-QBRgES_BF-QIgFevozLt9YXmGxJ6vxgLeYVZe92Wn8,2061
 sknetwork/regression/tests/test_API.py,sha256=7fQulvKzF9yEBlLie7fL5G1ZdyiG4DAFZQZ4Lix96qs,1024
-sknetwork/data/models.py,sha256=QyC_5ft7lkYzp3smmv54fHnyMUs88TYUq2FBU_KStMs,13156
+sknetwork/data/models.py,sha256=j3k2LKtxNjyihfJH3SyzA5jhFNBgaA17UCzihD59Lqo,13186
 sknetwork/data/test_graphs.py,sha256=OM6-7CiBN4UEAQUtE_2k5e5I72zDBL3r5fj_C2JXzNw,2484
 sknetwork/data/timeout.py,sha256=kwHOLZFnOTrRhiEjtcwATYhsXbf5e8zV1OCoEKuG8Zg,1047
-sknetwork/data/__init__.py,sha256=ejVS9hqX1Jf912UAazfaqIsNlppXCahEVDBv2IFdRUM,259
-sknetwork/data/toy_graphs.py,sha256=2Cy7EABhYKPtjtfrW71Drz51A3mSuGu7G0P24tYiwHY,25035
-sknetwork/data/parse.py,sha256=bRawtsCpm0CNgxjZ9CqpR_8nRJnW0ac561GoIlMOq1Y,26897
-sknetwork/data/load.py,sha256=gC61jqFdyhPXc4-vazK85UdB4hnFQFjH9f1xpQ7JScI,14360
-sknetwork/data/base.py,sha256=jeCwL-1O21CNkX1F9_eX4gl_BVNbeYabq_DSZr6ukB8,630
+sknetwork/data/__init__.py,sha256=xTK1qf-dIJomjDwSLXrYL6nUcNwo118YxN7b_6gozak,255
+sknetwork/data/toy_graphs.py,sha256=8-QKuwURndJ1_KEWlDqs-lBWBeoFxU3V3oUui4PsSDY,24632
+sknetwork/data/parse.py,sha256=Qrn2_i8XdVx7QNWhweI9Fu3i33C8PO_sOb8vPzReaYM,26995
+sknetwork/data/load.py,sha256=zN0fhEjEm0Mxp0bsdc13CW1zkb877vbo3om25nwpKrY,14356
+sknetwork/data/base.py,sha256=Jp0MJKcpfJCRZO_Nz18g1JqYFMMD1Rz8zLhnqlgO7tg,673
 sknetwork/data/tests/test_test_graphs.py,sha256=dVRds-3P8JVnwfAp32fGif3zhocfPK0p2rgcYwJWsUQ,849
 sknetwork/data/tests/test_parse.py,sha256=JOTFNWr77ZxKUKjw8TSbN-2dk-6YwmqN2OcrNkh7JVc,12717
 sknetwork/data/tests/__init__.py,sha256=FSfkSYRKjDqIuEiEZ39Otve50qSxi7QObNnNrHHPx5s,19
-sknetwork/data/tests/test_toy_graphs.py,sha256=kxOb7QpXGi8O7Kb6RmWoRUbAoyllM_-SXCRcYoH8B00,2137
+sknetwork/data/tests/test_toy_graphs.py,sha256=lknaYy5AWJjiqKfhgWhQEolN8e4CDe5ilNDpC5lenww,2197
 sknetwork/data/tests/test_models.py,sha256=oP-X_k0vbSB4CwlV4GQVVBAQ9uI_8frFicde5yhVYAc,1915
-sknetwork/data/tests/test_API.py,sha256=wJ4F4wPI3uI5WF_Pj2pMNSxSkY24Q7CO3kU8Sd5E-ac,957
-sknetwork/data/tests/test_base.py,sha256=I_0BXdj-BKvdm1LpPIRtlnPChVoYRTCC9ZvTuLT2_W8,308
+sknetwork/data/tests/test_API.py,sha256=LUWZX9pPpZLVuzgAz85sJk6tgKDaXKqc2Fhp91x-E6c,963
+sknetwork/data/tests/test_base.py,sha256=b-0CM1ResLoJXg6-jGmBWFii5JtZrXAhfYiAG70dW1w,312
 sknetwork/data/tests/test_load.py,sha256=9EXkw2TbDAUmpwE-kUTgxZieB4XDLF5drLVvyugX96M,3550
+scikit_network-0.33.0.dist-info/RECORD,,
+scikit_network-0.33.0.dist-info/LICENSE,sha256=zKbJMpbSKgGEUaNr_fKgvJrvw_3W4gnJs5XdLCK5Sxo,1622
+scikit_network-0.33.0.dist-info/WHEEL,sha256=ANsQuXN11eSX1PFSD4UW7vUcpdaOm9VfCH5CSYqUC20,109
+scikit_network-0.33.0.dist-info/AUTHORS.rst,sha256=MIEWJmfpIVmBPo03Xl_6j8kg7cjXicp9WVRQpuVDj9o,923
+scikit_network-0.33.0.dist-info/top_level.txt,sha256=fkwspWQ9B3csqb5ENEOoVciRY6XftnMuz4MvTDQeSsg,10
+scikit_network-0.33.0.dist-info/METADATA,sha256=KSryYoew7nGXScWKHnpxhItQbesZ7N1FBL7mKyZMg_U,14471

{scikit_network-0.32.1.dist-info → scikit_network-0.33.0.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.42.0)
+Generator: setuptools (70.3.0)
 Root-Is-Purelib: false
 Tag: cp311-cp311-macosx_11_0_arm64
 

sknetwork/__init__.py

@@ -4,7 +4,7 @@
 
 __author__ = """scikit-network team"""
 __email__ = "thomas.bonald@telecom-paris.fr"
-__version__ = '0.32.1'
+__version__ = '0.33.0'
 
 import sknetwork.topology
 import sknetwork.path

sknetwork/classification/diffusion.py

@@ -55,7 +55,7 @@ class DiffusionClassifier(BaseClassifier):
     >>> labels_true = graph.labels
     >>> labels = {0: labels_true[0], 33: labels_true[33]}
     >>> labels_pred = diffusion.fit_predict(adjacency, labels)
-    >>> np.round(np.mean(labels_pred == labels_true), 2)
+    >>> round(np.mean(labels_pred == labels_true), 2)
     0.97
 
     References
@@ -74,8 +74,9 @@ class DiffusionClassifier(BaseClassifier):
         self.scale = scale
 
     def fit(self, input_matrix: Union[sparse.csr_matrix, np.ndarray],
-            labels: Optional[Union[dict, np.ndarray]] = None, labels_row: Optional[Union[dict, np.ndarray]] = None,
-            labels_col: Optional[Union[dict, np.ndarray]] = None, force_bipartite: bool = False) \
+            labels: Optional[Union[dict, list, np.ndarray]] = None,
+            labels_row: Optional[Union[dict, list, np.ndarray]] = None,
+            labels_col: Optional[Union[dict, list, np.ndarray]] = None, force_bipartite: bool = False) \
             -> 'DiffusionClassifier':
         """Compute the solution to the Dirichlet problem (temperatures at equilibrium).
 

sknetwork/classification/knn.py

@@ -55,7 +55,7 @@ class NNClassifier(BaseClassifier):
     >>> labels_true = graph.labels
     >>> labels = {0: labels_true[0], 33: labels_true[33]}
     >>> labels_pred = classifier.fit_predict(adjacency, labels)
-    >>> np.round(np.mean(labels_pred == labels_true), 2)
+    >>> round(np.mean(labels_pred == labels_true), 2)
     0.82
     """
     def __init__(self, n_neighbors: int = 3, embedding_method: Optional[BaseEmbedding] = None, normalize: bool = True):
@@ -97,8 +97,9 @@ class NNClassifier(BaseClassifier):
 
         return probs, labels
 
-    def fit(self, input_matrix: Union[sparse.csr_matrix, np.ndarray], labels: Union[np.ndarray, dict] = None,
-            labels_row: Union[np.ndarray, dict] = None, labels_col: Union[np.ndarray, dict] = None) -> 'NNClassifier':
+    def fit(self, input_matrix: Union[sparse.csr_matrix, np.ndarray], labels: Union[np.ndarray, list, dict] = None,
+            labels_row: Union[np.ndarray, list, dict] = None,
+            labels_col: Union[np.ndarray, list, dict] = None) -> 'NNClassifier':
         """Node classification by k-nearest neighbors in the embedding space.
 
         Parameters

sknetwork/classification/metrics.py

@@ -34,7 +34,7 @@ def get_accuracy_score(labels_true: np.ndarray, labels_pred: np.ndarray) -> floa
     >>> import numpy as np
     >>> labels_true = np.array([0, 0, 1, 1])
     >>> labels_pred = np.array([0, 0, 0, 1])
-    >>> get_accuracy_score(labels_true, labels_pred)
+    >>> round(get_accuracy_score(labels_true, labels_pred), 2)
     0.75
     """
     check_vector_format(labels_true, labels_pred)
@@ -105,7 +105,7 @@ def get_f1_score(labels_true: np.ndarray, labels_pred: np.ndarray, return_precis
     >>> import numpy as np
     >>> labels_true = np.array([0, 0, 1, 1])
     >>> labels_pred = np.array([0, 0, 0, 1])
-    >>> np.round(get_f1_score(labels_true, labels_pred), 2)
+    >>> round(get_f1_score(labels_true, labels_pred), 2)
     0.67
     """
     values = set(labels_true[labels_true >= 0]) | set(labels_pred[labels_pred >= 0])
@@ -188,7 +188,7 @@ def get_average_f1_score(labels_true: np.ndarray, labels_pred: np.ndarray, avera
     >>> import numpy as np
     >>> labels_true = np.array([0, 0, 1, 1])
     >>> labels_pred = np.array([0, 0, 0, 1])
-    >>> np.round(get_average_f1_score(labels_true, labels_pred), 2)
+    >>> round(get_average_f1_score(labels_true, labels_pred), 2)
     0.73
     """
     if average == 'micro':

sknetwork/classification/propagation.py

@@ -91,19 +91,20 @@ class Propagation(BaseClassifier):
             labels = labels[index_seed]
         return index_seed.astype(np.int32), index_remain.astype(np.int32), labels.astype(np.int32)
 
-    def fit(self, input_matrix: Union[sparse.csr_matrix, np.ndarray], labels: Union[np.ndarray, dict] = None,
-            labels_row: Union[np.ndarray, dict] = None, labels_col: Union[np.ndarray, dict] = None) -> 'Propagation':
+    def fit(self, input_matrix: Union[sparse.csr_matrix, np.ndarray], labels: Union[np.ndarray, list, dict] = None,
+            labels_row: Union[np.ndarray, list, dict] = None,
+            labels_col: Union[np.ndarray, list, dict] = None) -> 'Propagation':
         """Node classification by label propagation.
 
         Parameters
         ----------
         input_matrix : sparse.csr_matrix, np.ndarray
             Adjacency matrix or biadjacency matrix of the graph.
-        labels : np.ndarray, dict
+        labels : array, list or dict
             Known labels. Negative values ignored.
-        labels_row : np.ndarray, dict
+        labels_row : array, list or dict
             Known labels of rows, for bipartite graphs.
-        labels_col : np.ndarray, dict
+        labels_col : array, list or dict
             Known labels of columns, for bipartite graphs.
 
         Returns

sknetwork/clustering/leiden.py

@@ -76,7 +76,8 @@ class Leiden(Louvain):
     References
     ----------
     * Traag, V. A., Waltman, L., & Van Eck, N. J. (2019).
-     `From Louvain to Leiden: guaranteeing well-connected communities`, Scientific reports.
+      `From Louvain to Leiden: guaranteeing well-connected communities`, Scientific reports.
+
     """
 
     def __init__(self, resolution: float = 1, modularity: str = 'dugue', tol_optimization: float = 1e-3,

sknetwork/clustering/louvain.py

@@ -131,9 +131,9 @@ class Louvain(BaseClustering, Log):
         increase :
             Gain in modularity after optimization.
         """
-        labels = labels.astype(np.int32)
-        indices = adjacency.indices
-        indptr = adjacency.indptr
+        labels = labels.astype(np.int64)
+        indices = adjacency.indices.astype(np.int64)
+        indptr = adjacency.indptr.astype(np.int64)
         data = adjacency.data.astype(np.float32)
         out_weights = out_weights.astype(np.float32)
         in_weights = in_weights.astype(np.float32)

sknetwork/clustering/tests/test_kcenters.py

@@ -4,7 +4,6 @@
 import unittest
 
 from sknetwork.clustering import KCenters
-from sknetwork.data import karate_club, painters, star_wars
 from sknetwork.data.test_graphs import *
 
 
@@ -13,7 +12,7 @@ class TestKCentersClustering(unittest.TestCase):
     def test_kcenters(self):
         # Test undirected graph
         n_clusters = 2
-        adjacency = karate_club()
+        adjacency = test_graph()
         n_row = adjacency.shape[0]
         kcenters = KCenters(n_clusters=n_clusters)
         labels = kcenters.fit_predict(adjacency)
@@ -22,7 +21,7 @@ class TestKCentersClustering(unittest.TestCase):
 
         # Test directed graph
         n_clusters = 3
-        adjacency = painters()
+        adjacency = test_digraph()
         n_row = adjacency.shape[0]
         kcenters = KCenters(n_clusters=n_clusters, directed=True)
         labels = kcenters.fit_predict(adjacency)
@@ -31,7 +30,7 @@ class TestKCentersClustering(unittest.TestCase):
 
         # Test bipartite graph
         n_clusters = 2
-        biadjacency = star_wars()
+        biadjacency = test_bigraph()
         n_row, n_col = biadjacency.shape
         kcenters = KCenters(n_clusters=n_clusters)
         kcenters.fit(biadjacency)
@@ -40,41 +39,10 @@ class TestKCentersClustering(unittest.TestCase):
         self.assertEqual(len(kcenters.labels_col_), n_col)
         self.assertEqual(len(set(labels)), n_clusters)
 
-    def test_kcenters_centers(self):
-        # Test centers for undirected graphs
-        n_clusters = 2
-        adjacency = karate_club()
-        kcenters = KCenters(n_clusters=n_clusters)
-        kcenters.fit(adjacency)
-        centers = kcenters.centers_
-        self.assertEqual(n_clusters, len(set(centers)))
-
-        # Test centers for bipartite graphs
-        n_clusters = 2
-        biadjacency = star_wars()
-        n_row, n_col = biadjacency.shape
-        for position in ["row", "col", "both"]:
-            kcenters = KCenters(n_clusters=n_clusters, center_position=position)
-            kcenters.fit(biadjacency)
-            centers_row = kcenters.centers_row_
-            centers_col = kcenters.centers_col_
-            if position == "row":
-                self.assertEqual(n_clusters, len(set(centers_row)))
-                self.assertTrue(np.all(centers_row < n_row))
-                self.assertTrue(centers_col is None)
-            if position == "col":
-                self.assertEqual(n_clusters, len(set(centers_col)))
-                self.assertTrue(np.all((centers_col < n_col) & (0 <= centers_col)))
-                self.assertTrue(centers_row is None)
-            if position == "both":
-                self.assertEqual(n_clusters, len(set(centers_row)) + len(set(centers_col)))
-                self.assertTrue(np.all(centers_row < n_row))
-                self.assertTrue(np.all((centers_col < n_col) & (0 <= centers_col)))
-
     def test_kcenters_error(self):
         # Test value errors
-        adjacency = karate_club()
-        biadjacency = star_wars()
+        adjacency = test_graph()
+        biadjacency = test_bigraph()
 
         # test n_clusters error
         kcenters = KCenters(n_clusters=1)

sknetwork/data/__init__.py

@@ -1,5 +1,5 @@
 """data module"""
-from sknetwork.data.base import Bunch
+from sknetwork.data.base import *
 from sknetwork.data.load import *
 from sknetwork.data.models import *
 from sknetwork.data.parse import from_edge_list, from_adjacency_list, from_csv, from_graphml

sknetwork/data/base.py

@@ -6,10 +6,10 @@ Created in May 2023
 """
 
 
-class Bunch(dict):
+class Dataset(dict):
     """Container object for datasets.
     Dictionary-like object that exposes its keys as attributes.
-    >>> dataset = Bunch(name='dataset')
+    >>> dataset = Dataset(name='dataset')
     >>> dataset['name']
     'dataset'
     >>> dataset.name
@@ -26,3 +26,8 @@ class Bunch(dict):
             return self[key]
         except KeyError:
             raise AttributeError(key)
+
+
+# alias for Dataset
+Bunch = Dataset
+