scikit-network 0.30.0__cp310-cp310-win_amd64.whl → 0.32.1__cp310-cp310-win_amd64.whl
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- {scikit_network-0.30.0.dist-info → scikit_network-0.32.1.dist-info}/AUTHORS.rst +3 -0
- {scikit_network-0.30.0.dist-info → scikit_network-0.32.1.dist-info}/METADATA +31 -3
- scikit_network-0.32.1.dist-info/RECORD +228 -0
- {scikit_network-0.30.0.dist-info → scikit_network-0.32.1.dist-info}/WHEEL +1 -1
- sknetwork/__init__.py +1 -1
- sknetwork/base.py +67 -0
- sknetwork/classification/base.py +24 -24
- sknetwork/classification/base_rank.py +17 -25
- sknetwork/classification/diffusion.py +35 -35
- sknetwork/classification/knn.py +24 -21
- sknetwork/classification/metrics.py +1 -1
- sknetwork/classification/pagerank.py +10 -10
- sknetwork/classification/propagation.py +23 -20
- sknetwork/classification/tests/test_diffusion.py +13 -3
- sknetwork/classification/vote.cp310-win_amd64.pyd +0 -0
- sknetwork/classification/vote.cpp +14482 -10351
- sknetwork/classification/vote.pyx +1 -3
- sknetwork/clustering/__init__.py +3 -1
- sknetwork/clustering/base.py +36 -40
- sknetwork/clustering/kcenters.py +253 -0
- sknetwork/clustering/leiden.py +241 -0
- sknetwork/clustering/leiden_core.cp310-win_amd64.pyd +0 -0
- sknetwork/clustering/leiden_core.cpp +31564 -0
- sknetwork/clustering/leiden_core.pyx +124 -0
- sknetwork/clustering/louvain.py +133 -102
- sknetwork/clustering/louvain_core.cp310-win_amd64.pyd +0 -0
- sknetwork/clustering/louvain_core.cpp +22457 -18792
- sknetwork/clustering/louvain_core.pyx +86 -96
- sknetwork/clustering/postprocess.py +2 -2
- sknetwork/clustering/propagation_clustering.py +15 -19
- sknetwork/clustering/tests/test_API.py +8 -4
- sknetwork/clustering/tests/test_kcenters.py +92 -0
- sknetwork/clustering/tests/test_leiden.py +34 -0
- sknetwork/clustering/tests/test_louvain.py +3 -4
- sknetwork/data/__init__.py +2 -1
- sknetwork/data/base.py +28 -0
- sknetwork/data/load.py +38 -37
- sknetwork/data/models.py +18 -18
- sknetwork/data/parse.py +54 -33
- sknetwork/data/test_graphs.py +2 -2
- sknetwork/data/tests/test_API.py +1 -1
- sknetwork/data/tests/test_base.py +14 -0
- sknetwork/data/tests/test_load.py +1 -1
- sknetwork/data/tests/test_parse.py +9 -12
- sknetwork/data/tests/test_test_graphs.py +1 -2
- sknetwork/data/toy_graphs.py +18 -18
- sknetwork/embedding/__init__.py +0 -1
- sknetwork/embedding/base.py +21 -20
- sknetwork/embedding/force_atlas.py +3 -2
- sknetwork/embedding/louvain_embedding.py +2 -2
- sknetwork/embedding/random_projection.py +5 -3
- sknetwork/embedding/spectral.py +0 -73
- sknetwork/embedding/tests/test_API.py +4 -28
- sknetwork/embedding/tests/test_louvain_embedding.py +4 -9
- sknetwork/embedding/tests/test_random_projection.py +2 -2
- sknetwork/embedding/tests/test_spectral.py +5 -8
- sknetwork/embedding/tests/test_svd.py +1 -1
- sknetwork/gnn/base.py +4 -4
- sknetwork/gnn/base_layer.py +3 -3
- sknetwork/gnn/gnn_classifier.py +45 -89
- sknetwork/gnn/layer.py +1 -1
- sknetwork/gnn/loss.py +1 -1
- sknetwork/gnn/optimizer.py +4 -3
- sknetwork/gnn/tests/test_base_layer.py +4 -4
- sknetwork/gnn/tests/test_gnn_classifier.py +12 -35
- sknetwork/gnn/utils.py +8 -8
- sknetwork/hierarchy/base.py +29 -2
- sknetwork/hierarchy/louvain_hierarchy.py +45 -41
- sknetwork/hierarchy/paris.cp310-win_amd64.pyd +0 -0
- sknetwork/hierarchy/paris.cpp +27369 -22852
- sknetwork/hierarchy/paris.pyx +7 -9
- sknetwork/hierarchy/postprocess.py +16 -16
- sknetwork/hierarchy/tests/test_API.py +1 -1
- sknetwork/hierarchy/tests/test_algos.py +5 -0
- sknetwork/hierarchy/tests/test_metrics.py +1 -1
- sknetwork/linalg/__init__.py +1 -1
- sknetwork/linalg/diteration.cp310-win_amd64.pyd +0 -0
- sknetwork/linalg/diteration.cpp +13474 -9454
- sknetwork/linalg/diteration.pyx +0 -2
- sknetwork/linalg/eig_solver.py +1 -1
- sknetwork/linalg/{normalization.py → normalizer.py} +18 -15
- sknetwork/linalg/operators.py +1 -1
- sknetwork/linalg/ppr_solver.py +1 -1
- sknetwork/linalg/push.cp310-win_amd64.pyd +0 -0
- sknetwork/linalg/push.cpp +22993 -18807
- sknetwork/linalg/push.pyx +0 -2
- sknetwork/linalg/svd_solver.py +1 -1
- sknetwork/linalg/tests/test_normalization.py +3 -7
- sknetwork/linalg/tests/test_operators.py +4 -8
- sknetwork/linalg/tests/test_ppr.py +1 -1
- sknetwork/linkpred/base.py +13 -2
- sknetwork/linkpred/nn.py +6 -6
- sknetwork/log.py +19 -0
- sknetwork/path/__init__.py +4 -3
- sknetwork/path/dag.py +54 -0
- sknetwork/path/distances.py +98 -0
- sknetwork/path/search.py +13 -47
- sknetwork/path/shortest_path.py +37 -162
- sknetwork/path/tests/test_dag.py +37 -0
- sknetwork/path/tests/test_distances.py +62 -0
- sknetwork/path/tests/test_search.py +26 -11
- sknetwork/path/tests/test_shortest_path.py +31 -36
- sknetwork/ranking/__init__.py +0 -1
- sknetwork/ranking/base.py +13 -8
- sknetwork/ranking/betweenness.cp310-win_amd64.pyd +0 -0
- sknetwork/ranking/betweenness.cpp +5709 -3017
- sknetwork/ranking/betweenness.pyx +0 -2
- sknetwork/ranking/closeness.py +7 -10
- sknetwork/ranking/pagerank.py +14 -14
- sknetwork/ranking/postprocess.py +12 -3
- sknetwork/ranking/tests/test_API.py +2 -4
- sknetwork/ranking/tests/test_betweenness.py +3 -3
- sknetwork/ranking/tests/test_closeness.py +3 -7
- sknetwork/ranking/tests/test_pagerank.py +11 -5
- sknetwork/ranking/tests/test_postprocess.py +5 -0
- sknetwork/regression/base.py +19 -2
- sknetwork/regression/diffusion.py +24 -10
- sknetwork/regression/tests/test_diffusion.py +8 -0
- sknetwork/test_base.py +35 -0
- sknetwork/test_log.py +15 -0
- sknetwork/topology/__init__.py +7 -8
- sknetwork/topology/cliques.cp310-win_amd64.pyd +0 -0
- sknetwork/topology/{kcliques.cpp → cliques.cpp} +23412 -20276
- sknetwork/topology/cliques.pyx +149 -0
- sknetwork/topology/core.cp310-win_amd64.pyd +0 -0
- sknetwork/topology/{kcore.cpp → core.cpp} +21732 -18867
- sknetwork/topology/core.pyx +90 -0
- sknetwork/topology/cycles.py +243 -0
- sknetwork/topology/minheap.cp310-win_amd64.pyd +0 -0
- sknetwork/{utils → topology}/minheap.cpp +19452 -15368
- sknetwork/{utils → topology}/minheap.pxd +1 -3
- sknetwork/{utils → topology}/minheap.pyx +1 -3
- sknetwork/topology/structure.py +3 -43
- sknetwork/topology/tests/test_cliques.py +11 -11
- sknetwork/topology/tests/test_core.py +19 -0
- sknetwork/topology/tests/test_cycles.py +65 -0
- sknetwork/topology/tests/test_structure.py +2 -16
- sknetwork/topology/tests/test_triangles.py +11 -15
- sknetwork/topology/tests/test_wl.py +72 -0
- sknetwork/topology/triangles.cp310-win_amd64.pyd +0 -0
- sknetwork/topology/triangles.cpp +5056 -2696
- sknetwork/topology/triangles.pyx +74 -89
- sknetwork/topology/weisfeiler_lehman.py +56 -86
- sknetwork/topology/weisfeiler_lehman_core.cp310-win_amd64.pyd +0 -0
- sknetwork/topology/weisfeiler_lehman_core.cpp +14727 -10622
- sknetwork/topology/weisfeiler_lehman_core.pyx +0 -2
- sknetwork/utils/__init__.py +1 -31
- sknetwork/utils/check.py +2 -2
- sknetwork/utils/format.py +5 -3
- sknetwork/utils/membership.py +2 -2
- sknetwork/utils/tests/test_check.py +3 -3
- sknetwork/utils/tests/test_format.py +3 -1
- sknetwork/utils/values.py +1 -1
- sknetwork/visualization/__init__.py +2 -2
- sknetwork/visualization/dendrograms.py +55 -7
- sknetwork/visualization/graphs.py +292 -72
- sknetwork/visualization/tests/test_dendrograms.py +9 -9
- sknetwork/visualization/tests/test_graphs.py +71 -62
- scikit_network-0.30.0.dist-info/RECORD +0 -227
- sknetwork/embedding/louvain_hierarchy.py +0 -142
- sknetwork/embedding/tests/test_louvain_hierarchy.py +0 -19
- sknetwork/path/metrics.py +0 -148
- sknetwork/path/tests/test_metrics.py +0 -29
- sknetwork/ranking/harmonic.py +0 -82
- sknetwork/topology/dag.py +0 -74
- sknetwork/topology/dag_core.cp310-win_amd64.pyd +0 -0
- sknetwork/topology/dag_core.cpp +0 -23350
- sknetwork/topology/dag_core.pyx +0 -38
- sknetwork/topology/kcliques.cp310-win_amd64.pyd +0 -0
- sknetwork/topology/kcliques.pyx +0 -193
- sknetwork/topology/kcore.cp310-win_amd64.pyd +0 -0
- sknetwork/topology/kcore.pyx +0 -120
- sknetwork/topology/tests/test_cores.py +0 -21
- sknetwork/topology/tests/test_dag.py +0 -26
- sknetwork/topology/tests/test_wl_coloring.py +0 -49
- sknetwork/topology/tests/test_wl_kernel.py +0 -31
- sknetwork/utils/base.py +0 -35
- sknetwork/utils/minheap.cp310-win_amd64.pyd +0 -0
- sknetwork/utils/simplex.py +0 -140
- sknetwork/utils/tests/test_base.py +0 -28
- sknetwork/utils/tests/test_bunch.py +0 -16
- sknetwork/utils/tests/test_projection_simplex.py +0 -33
- sknetwork/utils/tests/test_verbose.py +0 -15
- sknetwork/utils/verbose.py +0 -37
- {scikit_network-0.30.0.dist-info → scikit_network-0.32.1.dist-info}/LICENSE +0 -0
- {scikit_network-0.30.0.dist-info → scikit_network-0.32.1.dist-info}/top_level.txt +0 -0
- /sknetwork/{utils → data}/timeout.py +0 -0
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class TestBunch(unittest.TestCase):
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Created in December 2019
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@author: Quentin Lutz <qlutz@enst.fr>
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