scikit-misc 0.5.1.dev3__cp313-cp313-win_amd64.whl

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Files changed (21) hide show
  1. scikit_misc-0.5.1.dev3-cp313-cp313-win_amd64.whl +0 -0
  2. scikit_misc-0.5.1.dev3.dist-info/LICENSE +26 -0
  3. scikit_misc-0.5.1.dev3.dist-info/METADATA +122 -0
  4. scikit_misc-0.5.1.dev3.dist-info/RECORD +21 -0
  5. scikit_misc-0.5.1.dev3.dist-info/WHEEL +4 -0
  6. skmisc/__config__.py +117 -0
  7. skmisc/__init__.py +43 -0
  8. skmisc/_distributor_init.py +10 -0
  9. skmisc/_version.py +4 -0
  10. skmisc/loess/__init__.py +64 -0
  11. skmisc/loess/_loess.cp313-win_amd64.lib +0 -0
  12. skmisc/loess/_loess.cp313-win_amd64.pyd +0 -0
  13. skmisc/loess/tests/__init__.py +0 -0
  14. skmisc/loess/tests/co2_data +87 -0
  15. skmisc/loess/tests/co2_results_double +7 -0
  16. skmisc/loess/tests/co2_results_real +7 -0
  17. skmisc/loess/tests/gas_data +3 -0
  18. skmisc/loess/tests/gas_result +10 -0
  19. skmisc/loess/tests/madeup_data +4 -0
  20. skmisc/loess/tests/madeup_result +16 -0
  21. skmisc/loess/tests/test_loess.py +284 -0
scikit_misc-0.5.1.dev3-cp313-cp313-win_amd64.whl ADDED
File without changes
scikit_misc-0.5.1.dev3.dist-info/LICENSE ADDED
@@ -0,0 +1,26 @@
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+ Copyright (c) 2016, Hassan Kibirige
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+ All rights reserved.
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+
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+ Redistribution and use in source and binary forms, with or without
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+ modification, are permitted provided that the following conditions are met:
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+
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+ * Redistributions of source code must retain the above copyright notice,
8
+ this list of conditions and the following disclaimer.
9
+ * Redistributions in binary form must reproduce the above copyright
10
+ notice, this list of conditions and the following disclaimer in the
11
+ documentation and/or other materials provided with the distribution.
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+ * Neither the name of nor the names of its contributors may be used to
13
+ endorse or promote products derived from this software without specific
14
+ prior written permission.
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+
16
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
18
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
19
+ ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
20
+ LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
21
+ CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
22
+ SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
23
+ INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
24
+ CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
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+ ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
26
+ POSSIBILITY OF SUCH DAMAGE.
scikit_misc-0.5.1.dev3.dist-info/METADATA ADDED
@@ -0,0 +1,122 @@
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+ Metadata-Version: 2.1
2
+ Name: scikit-misc
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+ Version: 0.5.1.dev3
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+ Summary: Miscellaneous tools for scientific computing.
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+ Author-Email: Hassan Kibirige <has2k1@gmail.com>
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+ License: Copyright (c) 2016, Hassan Kibirige
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+ All rights reserved.
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+
9
+ Redistribution and use in source and binary forms, with or without
10
+ modification, are permitted provided that the following conditions are met:
11
+
12
+ * Redistributions of source code must retain the above copyright notice,
13
+ this list of conditions and the following disclaimer.
14
+ * Redistributions in binary form must reproduce the above copyright
15
+ notice, this list of conditions and the following disclaimer in the
16
+ documentation and/or other materials provided with the distribution.
17
+ * Neither the name of nor the names of its contributors may be used to
18
+ endorse or promote products derived from this software without specific
19
+ prior written permission.
20
+
21
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
22
+ AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
23
+ IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
24
+ ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
25
+ LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
26
+ CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
27
+ SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
28
+ INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
29
+ CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
30
+ ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
31
+ POSSIBILITY OF SUCH DAMAGE.
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+
33
+ Classifier: Intended Audience :: Science/Research
34
+ Classifier: License :: OSI Approved :: BSD License
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+ Classifier: Operating System :: Unix
36
+ Classifier: Operating System :: MacOS
37
+ Classifier: Operating System :: Microsoft :: Windows
38
+ Classifier: Operating System :: POSIX
39
+ Classifier: Programming Language :: C
40
+ Classifier: Programming Language :: Fortran
41
+ Classifier: Programming Language :: Python :: 3
42
+ Classifier: Programming Language :: Python :: 3.10
43
+ Classifier: Programming Language :: Python :: 3.11
44
+ Classifier: Programming Language :: Python :: 3.12
45
+ Classifier: Programming Language :: Python :: 3.13
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+ Classifier: Topic :: Scientific/Engineering
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+ Project-URL: homepage, https://has2k1.github.io/scikit-misc/stable
48
+ Project-URL: repository, https://github.com/has2k1/scikit-misc
49
+ Project-URL: documentation, https://has2k1.github.io/scikit-misc/stable
50
+ Project-URL: changelog, https://has2k1.github.io/scikit-misc/stable/changelog.html
51
+ Requires-Python: >=3.10
52
+ Requires-Dist: numpy>=1.23.5
53
+ Provides-Extra: all
54
+ Requires-Dist: scikit-misc[doc]; extra == "all"
55
+ Requires-Dist: scikit-misc[build]; extra == "all"
56
+ Requires-Dist: scikit-misc[lint]; extra == "all"
57
+ Requires-Dist: scikit-misc[test]; extra == "all"
58
+ Requires-Dist: scikit-misc[dev]; extra == "all"
59
+ Provides-Extra: doc
60
+ Requires-Dist: numpydoc; extra == "doc"
61
+ Requires-Dist: sphinx; extra == "doc"
62
+ Provides-Extra: build
63
+ Requires-Dist: cython; extra == "build"
64
+ Requires-Dist: build; extra == "build"
65
+ Requires-Dist: spin; extra == "build"
66
+ Requires-Dist: meson; extra == "build"
67
+ Requires-Dist: meson-python; extra == "build"
68
+ Requires-Dist: ninja; extra == "build"
69
+ Provides-Extra: lint
70
+ Requires-Dist: ruff; extra == "lint"
71
+ Provides-Extra: test
72
+ Requires-Dist: pytest-cov; extra == "test"
73
+ Provides-Extra: dev
74
+ Requires-Dist: wheel; extra == "dev"
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+ Requires-Dist: twine; extra == "dev"
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+ Description-Content-Type: text/x-rst
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+
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+ ###########
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+ scikit-misc
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+ ###########
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+
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+ ================= =================
83
+ Latest Release |release|_
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+ License |license|_
85
+ Build Status |buildstatus|_
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+ Coverage |coverage|_
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+ Documentation Documentation_
88
+ ================= =================
89
+
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+ Miscellaneous tools for data analysis and scientific computing.
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+
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+ Installation
93
+ ============
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+
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+ **Official version**
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+
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+ .. code-block:: console
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+
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+ $ pip install scikit-misc
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+
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+
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+ **Development version**
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+
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+ .. code-block:: console
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+
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+ $ pip install git+https://github.com/has2k1/scikit-misc.git@main
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+
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+
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+
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+ .. |release| image:: https://img.shields.io/pypi/v/scikit-misc.svg
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+ .. _release: https://pypi.python.org/pypi/scikit-misc
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+
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+ .. |license| image:: https://img.shields.io/pypi/l/scikit-misc.svg
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+ .. _license: https://pypi.python.org/pypi/scikit-misc
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+
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+ .. |buildstatus| image:: https://github.com/has2k1/scikit-misc/workflows/build/badge.svg?branch=main
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+ .. _buildstatus: https://github.com/has2k1/scikit-misc/actions?query=branch%3Amain+workflow%3A%22build%22
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+
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+ .. |coverage| image:: https://codecov.io /github/has2k1/scikit-misc/coverage.svg?branch=main
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+ .. _coverage: https://codecov.io/github/has2k1/scikit-misc?branch=main
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+
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+ .. _Documentation: https://has2k1.github.io/scikit-misc
scikit_misc-0.5.1.dev3.dist-info/RECORD ADDED
@@ -0,0 +1,21 @@
1
+ scikit_misc-0.5.1.dev3-cp313-cp313-win_amd64.whl,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ skmisc/__config__.py,sha256=eSJrjRHQXxhjDEKc5mJNPKr1RjYGXoTN-p3YF7U4Aaw,3247
3
+ skmisc/__init__.py,sha256=otcK3Qg-nH3gkQPc2hV1K486pKceOZs2DGzXTJ3OR3w,1323
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+ skmisc/_distributor_init.py,sha256=BaHRy7buKOTHXYEh3CgfZ09qQNcQJDeiT4L-cceDz94,353
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+ skmisc/_version.py,sha256=qcwRrLYA7T_Gr9T0z6xrPXoscV3HiQmIhjZT_KgoqaI,154
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+ skmisc/loess/__init__.py,sha256=usOeOL6T9H_Rki2s00Hov9mcz10ml5thdb1mnCAU_hw,2249
7
+ skmisc/loess/_loess.cp313-win_amd64.lib,sha256=bSMip566LMyOjSOKsG2s_cos7ieDleg4CZqVWYR7v48,1996
8
+ skmisc/loess/_loess.cp313-win_amd64.pyd,sha256=mJSwx9_7GsDYkoKZNv9GB8_J71wovPkyJP2zqXPY4Ek,279040
9
+ skmisc/loess/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
10
+ skmisc/loess/tests/co2_data,sha256=HhEOebV0VQoMGz7uxRlQXSZ-xUxYvmmbDXA4SqgnJFU,2571
11
+ skmisc/loess/tests/co2_results_double,sha256=THSQkoOE2CoN1KgRllenB67YPbHqLzRzHyuNAonZ8Xw,50138
12
+ skmisc/loess/tests/co2_results_real,sha256=eI-tZWWEPYFmniG6qPTsAjvIuAJHdydoo-8AzwbAqCs,31346
13
+ skmisc/loess/tests/gas_data,sha256=nKGvpmhCuF01MXXzgJcCHjdpu9Tos6HB8nPhewaWarE,430
14
+ skmisc/loess/tests/gas_result,sha256=tmM_nkv8Dmq3LEyh79A86bVLtDxB7VWWYMIN5N9nZls,816
15
+ skmisc/loess/tests/madeup_data,sha256=yl319uCS2fVBEV67B2HuVUMOulIcCOAOkiZqLOOji18,2920
16
+ skmisc/loess/tests/madeup_result,sha256=7rNBbe8nQ3dM3nIaoT66Yc_jzdyCGpKid4-f67JFSY8,4467
17
+ skmisc/loess/tests/test_loess.py,sha256=sZk0w0TsU84yrmmlE9sDeQMZgfdHqFuwgKELZDj4p64,10537
18
+ scikit_misc-0.5.1.dev3.dist-info/LICENSE,sha256=mpejZQSZn17HBnYiQv7u1TLJCGEcuCONSjoLInSnIFU,1504
19
+ scikit_misc-0.5.1.dev3.dist-info/METADATA,sha256=O3HoiGFwL0p4kJDRY6kAKENLLNWTZh5O-kcUSdLH21k,4997
20
+ scikit_misc-0.5.1.dev3.dist-info/WHEEL,sha256=suq8ARrxbiI7iLH3BgK-82uzxQ-4Hm-m8w01oCokrtA,85
21
+ scikit_misc-0.5.1.dev3.dist-info/RECORD,,
scikit_misc-0.5.1.dev3.dist-info/WHEEL ADDED
@@ -0,0 +1,4 @@
1
+ Wheel-Version: 1.0
2
+ Generator: meson
3
+ Root-Is-Purelib: false
4
+ Tag: cp313-cp313-win_amd64
skmisc/__config__.py ADDED
@@ -0,0 +1,117 @@
1
+ # This file is generated by scikit-miscs's build process
2
+ # It contains system_info results at the time of building this package.
3
+ from enum import Enum
4
+
5
+ __all__ = ["show"]
6
+ _built_with_meson = True
7
+
8
+
9
+ class DisplayModes(Enum):
10
+ stdout = "stdout"
11
+ dicts = "dicts"
12
+
13
+
14
+ def _cleanup(d):
15
+ """
16
+ Removes empty values in a `dict` recursively
17
+ This ensures we remove values that Meson could not provide to CONFIG
18
+ """
19
+ if isinstance(d, dict):
20
+ return { k: _cleanup(v) for k, v in d.items() if v != '' and _cleanup(v) != '' }
21
+ else:
22
+ return d
23
+
24
+
25
+ CONFIG = _cleanup(
26
+ {
27
+ "Compilers": {
28
+ "c": {
29
+ "name": "msvc",
30
+ "linker": "link",
31
+ "version": "19.29.30158",
32
+ "commands": "cl",
33
+ },
34
+ "cython": {
35
+ "name": "cython",
36
+ "linker": "cython",
37
+ "version": "3.0.12",
38
+ "commands": "cython",
39
+ },
40
+ "fortran": {
41
+ "name": "gcc",
42
+ "linker": "ld.bfd",
43
+ "version": "10.3.0",
44
+ "commands": "gfortran",
45
+ },
46
+ },
47
+ "Build Dependencies": {
48
+ },
49
+ "Machine Information": {
50
+ "host": {
51
+ "cpu": "x86_64",
52
+ "family": "x86_64",
53
+ "endian": "little",
54
+ "system": "windows",
55
+ },
56
+ "build": {
57
+ "cpu": "x86_64",
58
+ "family": "x86_64",
59
+ "endian": "little",
60
+ "system": "windows",
61
+ },
62
+ "cross-compiled": bool("False".lower().replace('false', '')),
63
+ },
64
+ "Python Information": {
65
+ "path": r"C:\Users\runneradmin\AppData\Local\Temp\build-env-xnjrc587\Scripts\python.exe",
66
+ "version": "3.13",
67
+ },
68
+ }
69
+ )
70
+
71
+
72
+ def _check_pyyaml():
73
+ import yaml
74
+
75
+ return yaml
76
+
77
+
78
+ def show(mode=DisplayModes.stdout.value):
79
+ """
80
+ Show libraries and system information on which scikit-misc was built
81
+ and is being used
82
+
83
+ Parameters
84
+ ----------
85
+ mode : {`'stdout'`, `'dicts'`}, optional.
86
+ Indicates how to display the config information.
87
+ `'stdout'` prints to console, `'dicts'` returns a dictionary
88
+ of the configuration.
89
+
90
+ Returns
91
+ -------
92
+ out : {`dict`, `None`}
93
+ If mode is `'dicts'`, a dict is returned, else None
94
+
95
+ Notes
96
+ -----
97
+ 1. The `'stdout'` mode will give more readable
98
+ output if ``pyyaml`` is installed
99
+
100
+ """
101
+ if mode == DisplayModes.stdout.value:
102
+ try: # Non-standard library, check import
103
+ yaml = _check_pyyaml()
104
+
105
+ print(yaml.dump(CONFIG))
106
+ except ModuleNotFoundError:
107
+ import warnings
108
+ import json
109
+
110
+ warnings.warn("Install `pyyaml` for better output", stacklevel=1)
111
+ print(json.dumps(CONFIG, indent=2))
112
+ elif mode == DisplayModes.dicts.value:
113
+ return CONFIG
114
+ else:
115
+ raise AttributeError(
116
+ f"Invalid `mode`, use one of: {', '.join([e.value for e in DisplayModes])}"
117
+ )
skmisc/__init__.py ADDED
@@ -0,0 +1,43 @@
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+ from importlib.metadata import PackageNotFoundError, version
2
+
3
+ try:
4
+ __version__ = version('scikit_misc')
5
+ except PackageNotFoundError:
6
+ # package is not installed
7
+ pass
8
+ finally:
9
+ del version
10
+ del PackageNotFoundError
11
+
12
+ __all__ = ['__version__']
13
+
14
+ try:
15
+ from skmisc.__config__ import show as show_config # noqa: F401
16
+ except ImportError as err:
17
+ msg = """Error importing skmisc: you cannot import skmisc while
18
+ being in skmisc source directory; please exit the skmisc source
19
+ tree first, and relaunch your python intepreter."""
20
+ raise ImportError('\n\n'.join([err.message, msg])) # type: ignore
21
+ else:
22
+ __all__.append('show_config')
23
+
24
+
25
+ def test(args=None, plugins=None):
26
+ """
27
+ Run tests
28
+ """
29
+ from pathlib import Path
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+ # The doctests are not run when called from an installed
31
+ # package since the pytest.ini is not included in the
32
+ # package.
33
+ try:
34
+ import pytest
35
+ except ImportError:
36
+ msg = "To run the tests, you must install pytest"
37
+ raise ImportError(msg)
38
+ path = str(Path(__file__).parent)
39
+ if args is None:
40
+ args = [path]
41
+ else:
42
+ args.append(path)
43
+ return pytest.main(args=args, plugins=plugins)
skmisc/_distributor_init.py ADDED
@@ -0,0 +1,10 @@
1
+ """ Distributor init file
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+
3
+ Distributors: you can add custom code here to support particular distributions
4
+ of scikit-misc.
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+
6
+ For example, this is a good place to put any checks for hardware requirements.
7
+
8
+ The scikit-misc standard source distribution will not put code in this file, so
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+ you can safely replace this file with your own version.
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+ """
skmisc/_version.py ADDED
@@ -0,0 +1,4 @@
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+ # This file is dynamically generated by the build system to support
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+ # versioning with source control. Do not edit by hand
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+
4
+ __version__ = "0.5.1.dev3"
skmisc/loess/__init__.py ADDED
@@ -0,0 +1,64 @@
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+ """
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+ =================================================
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+ Locally-weighted regression (:mod:`skmisc.loess`)
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+ =================================================
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+
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+ Loess is a procedure for estimating a regression surface by a multivariate
7
+ smoothing procedure. A linear or quadratic function of the independent
8
+ variables is fit in a moving fashion that is analogous to how a moving
9
+ average is computed for a time series.
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+
11
+ Compared to approaches that fit global parametric functions, loess
12
+ substantially increases the domain of surfaces that can be estimated without
13
+ distortion. However, analogues of the statistical procedures used
14
+ in parametric function fitting -- for example, ANOVA and t intervals --
15
+ involve statistics whose distributions are well approximated by familiar
16
+ distributions.
17
+
18
+ .. autosummary::
19
+ :toctree: generated/
20
+ :template: cython_class.rst
21
+
22
+ loess
23
+ loess_inputs
24
+ loess_model
25
+ loess_control
26
+ loess_outputs
27
+ loess_prediction
28
+ loess_confidence_intervals
29
+ loess_anova
30
+
31
+ Source
32
+ ------
33
+ The original source code was written by William S. Cleveland, Eric Grosse
34
+ and Ming-Jen Shyu. It is available at http://www.netlib.org/a/dloess. It
35
+ was initially adapted to for use in Scipy by Pierre GF Gerard-Marchant.
36
+
37
+ For more see references [1]_ [2]_ and [3]_.
38
+
39
+ .. [1] W. S. Cleveland, E. Grosse, and M. J. Shyu. Local Regression Models.
40
+ In J. M. Chambers and T. Hastie, editors, Statistical Models in S,
41
+ pages 309--376. Chapman and Hall, New York, 1992.
42
+
43
+ .. [2] W. S. Cleveland, S. J. Devlin, and E. Grosse. Regression by Local
44
+ Fitting: Methods, Properties, and Computing. Journal of Econometrics, 37:
45
+ pp. 87--114. 1988.
46
+
47
+ .. [3] W. S. Cleveland. Robust Locally Weighted Regression and Smoothing
48
+ Scatterplots. Journal of the American Statistical Association, 74:
49
+ pp. 829--836. 1979.
50
+ """
51
+ from ._loess import (
52
+ loess,
53
+ loess_anova,
54
+ loess_confidence_intervals,
55
+ loess_control,
56
+ loess_inputs,
57
+ loess_model,
58
+ loess_outputs,
59
+ loess_prediction,
60
+ )
61
+
62
+ __all__ = ['loess', 'loess_model', 'loess_control', 'loess_inputs',
63
+ 'loess_model', 'loess_outputs', 'loess_prediction',
64
+ 'loess_confidence_intervals', 'loess_anova']
skmisc/loess/_loess.cp313-win_amd64.lib ADDED
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skmisc/loess/_loess.cp313-win_amd64.pyd ADDED
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skmisc/loess/tests/__init__.py ADDED
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skmisc/loess/tests/co2_data ADDED
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1
+ 315.58 316.39 316.79 317.82
2
+ 318.39 318.22 316.68 315.01
3
+ 314.02 313.55 315.02 315.75
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+ 316.52 317.1 317.79 319.22
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+ 320.08 319.7 318.27 315.99
6
+ 314.24 314.05 315.05 316.23
7
+ 316.92 317.76 318.54 319.49
8
+ 320.64 319.85 318.7 316.96
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+ 315.17 315.47 316.19 317.17
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+ 318.12 318.72 319.79 320.68
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+ 321.28 320.89 319.79 317.56
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+ 316.46 315.59 316.85 317.87
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+ 318.87 319.25 320.13 321.49
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+ 322.34 321.62 319.85 317.87
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+ 316.36 316.24 317.13 318.46
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+ 319.57 320.23 320.89 321.54
17
+ 322.2 321.9 320.42 318.6
18
+ 316.73 317.15 317.94 318.91
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+ 319.73 320.78 321.23 322.49
20
+ 322.59 322.35 321.61 319.24
21
+ 318.23 317.76 319.36 319.5
22
+ 320.35 321.4 322.22 323.45
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+ 323.8 323.5 322.16 320.09
24
+ 318.26 317.66 319.47 320.7
25
+ 322.06 322.23 322.78 324.1
26
+ 324.63 323.79 322.34 320.73
27
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+ 315.5519 315.6444 315.7370 315.8309 315.9249 316.0178 316.1107 316.2020 316.2933 316.3990 316.5046 316.6163 316.7279 316.8079 316.8878 316.9311 316.9743 317.0090 317.0437 317.0798 317.1160 317.1457 317.1753 317.2173 317.2592 317.3336 317.4079 317.5032 317.5985 317.6932 317.7880 317.8778 317.9677 318.0505 318.1334 318.2101 318.2868 318.3582 318.4297 318.4905 318.5515 318.6045 318.6576 318.7044 318.7512 318.7997 318.8482 318.8934 318.9387 318.9714 319.0042 319.0360 319.0678 319.1112 319.1547 319.2017 319.2487 319.2848 319.3208 319.3572 319.3935 319.4408 319.4881 319.5362 319.5844 319.6243 319.6643 319.7062 319.7481 319.8018 319.8554 319.9161 319.9768 320.0472 320.1175 320.1960 320.2744 320.3428 320.4112 320.4777 320.5442 320.6194 320.6946 320.7675 320.8404 320.8941 320.9478 321.0001 321.0525 321.1218 321.1912 321.2603 321.3293 321.3860 321.4426 321.4910 321.5395 321.5891 321.6387 321.6929 321.7472 321.8074 321.8677 321.9326 321.9974 322.0666 322.1357 322.2221 322.3085 322.3978 322.4871 322.5602 322.6334 322.7142 322.7951 322.9083 323.0215 323.1505 323.2796 323.4066 323.5336 323.6655 323.7974 323.9248 324.0522 324.1571 324.2621 324.3597 324.4574 324.5563 324.6551 324.7526 324.8501 324.9600 325.0699 325.1974 325.3250 325.4465 325.5681 325.6663 325.7645 325.8489 325.9333 326.0171 326.1010 326.1757 326.2505 326.3240 326.3975 326.4841 326.5707 326.6689 326.7671 326.8619 326.9567 327.0334 327.1101 327.1916 327.2731 327.3853 327.4976 327.6297 327.7618 327.9146 328.0674 328.2484 328.4293 328.6387 328.8480 329.0606 329.2731 329.4512 329.6294 329.7654 329.9015 329.9944 330.0872 330.1566 330.2260 330.2656 330.3052 330.3234 330.3416 330.3688 330.3960 330.4333 330.4705 330.4956 330.5207 330.5406 330.5605 330.5999 330.6394 330.6982 330.7570 330.8309 330.9047 330.9972 331.0897 331.2050 331.3204 331.4307 331.5411 331.6268 331.7126 331.7816 331.8506 331.9108 331.9710 332.0377 332.1044 332.1886 332.2728 332.3846 332.4964 332.6316 332.7668 332.9182 333.0696 333.2294 333.3892 333.5459 333.7026 333.8486 333.9946 334.1266 334.2587 334.3876 334.5166 334.6480 334.7794 334.9027 335.0260 335.1393 335.2527 335.3613 335.4700 335.5737 335.6774 335.7795 335.8816 335.9893 336.0971 336.2180 336.3389 336.4763 336.6138 336.7694 336.9250 337.0909 337.2568 337.4205 337.5841 337.7405 337.8969 338.0427 338.1884 338.3105 338.4326 338.5441 338.6555 338.7655 338.8755 338.9668 339.0580 339.1279 339.1978 339.2682 339.3386 339.4240 339.5094 339.5996 339.6898 339.7864 339.8830 339.9971 340.1111 340.2360 340.3608 340.4738 340.5868 340.6892 340.7917 340.9008 341.0099 341.1549 341.2999 341.4833 341.6667 341.8679 342.0690 342.2645 342.4600 342.6507 342.8414 343.0210 343.2006 343.3539 343.5072 343.6369 343.7666 343.8864 344.0062 344.1151 344.2241 344.3238 344.4236 344.5265 344.6294 344.7352 344.8410 344.9409 345.0409 345.1429 345.2449 345.3532 345.4615 345.5617 345.6619 345.7472 345.8325 345.9183 346.0041 346.1007 346.1973 346.2995 346.4017 346.5121 346.6226 346.7441 346.8656 346.9885 347.1115 347.2327 347.3539 347.4835 347.6131 347.7646 347.9162 348.1116 348.3071 348.4999 348.6928 348.8899 349.0870 349.2884 349.4897 349.7021
7
+ 0.9473456 0.8820528 0.9981718 0.9523941 0.8169235 0.9968721 0.7275636 0.9908377 0.6374046 0.9900793 0.5952753 0.9727222 0.9657797 0.8412194 0.8863041 0.9650735 0.7412772 0.5911558 0.7918944 0.9976359 0.9126042 0.9287147 0.8981016 0.9992640 0.8516618 0.9641449 0.9999655 0.9084932 0.8229079 0.9775841 0.9999740 0.8893542 0.9814858 0.6921397 0.9997987 0.9893009 0.9868131 0.9194017 0.8840622 0.9997586 0.9944118 0.9979475 0.8869542 0.9995601 0.5853120 0.8529151 0.9910294 0.9921290 0.9993278 0.8233213 0.9964389 0.8739912 0.5036717 0.8577449 0.8799009 0.9003027 0.9457330 0.9885447 0.8570249 0.9877417 0.8345523 0.8603712 0.8764476 0.8674909 0.9248952 0.9995702 0.9426413 0.9972472 0.8482621 0.7178012 0.9944118 0.9972574 0.9405500 0.9139733 0.9851364 0.9969788 0.4954960 0.8312120 0.8113978 0.9723752 0.5457299 0.9453593 0.2643782 0.7797844 0.6239225 0.9947231 0.9904200 0.9260687 0.9922562 0.9681790 0.9866477 0.9993476 0.8408600 0.1812998 0.9994192 0.9156029 0.2818184 0.9746988 0.9856681 0.9676514 0.9889814 0.7985213 0.5947735 0.9931651 0.9261450 0.9992403 0.8309539 0.5941209 0.9845950 0.9931651 0.9551575 0.8795514 0.9389349 0.9398142 0.9144093 0.9944832 0.9138095 0.8916704 0.6464453 0.9860324 0.9495300 0.9990164 0.8044351 0.9871626 0.9498475 0.9004778 0.8719712 0.9955013 0.8243347 0.9442974 0.7816713 0.9952399 0.9405271 0.9865257 0.8954014 0.8391304 0.7213080 0.8975996 0.9288895 0.9381664 0.8617947 0.6964918 0.9709492 0.9894392 0.9655861 0.9818738 0.7010069 0.1039263 0.9831502 0.9979994 0.9821939 0.9348792 0.8464258 0.9887996 0.8859938 0.8913366 0.9858394 0.9611016 0.3264723 0.9174322 0.9840199 0.2168292 0.5075723 0.8040431 0.9408705 0.8893237 0.9207462 0.9894688 0.9976125 0.9792520 0.9570797 0.9320744 0.9494027 0.9463241 0.8543022 0.3240814 0.5827369 0.7932186 0.9575490 0.5153625 7.5613648E-02 0.9968399 0.9972875 0.9896256 0.9998081 0.7909694 0.9995499 0.8123233 0.9996711 0.9008568 0.9924324 0.9765879 0.9759859 0.8392387 0.5412561 0.6502172 0.9204307 0.8854656 0.9938530 0.9838016 0.8638172 0.9807110 0.9956102 0.9980421 0.9998107 0.9649314 0.9413726 0.9854034 0.9891018 0.9846898 0.9838746 0.9782504 0.9896938 0.7482746 0.8501588 0.9267029 0.9640011 0.8578818 0.9719143 0.9755108 0.9730045 0.9828760 0.9745318 0.8800598 0.8233213 0.9392827 0.9522703 0.9719781 0.8818638 0.9571581 0.9319032 0.9987569 0.7301404 0.9874538 0.9430911 0.8306218 0.9959595 0.9763831 0.9998436 0.9944333 0.9808433 0.9747442 0.9586537 0.8875102 0.8213251 0.9816285 0.9945189 0.9021925 0.8195850 0.9273343 0.9694217 0.9929974 0.7616304 0.9767481 0.3199174 0.9965921 0.9998900 0.8672252 0.9997818 0.9995781 0.9983168 0.9902315 0.9846542 0.8739912 0.9251511 0.6491545 0.7521552 0.9149528 0.8217025 0.9999934 0.7942597 0.6791515 0.5116771 0.9076493 0.9983443 0.9999844 0.9324158 0.8247468 0.6679452 0.9943252 0.9998839 0.9321719 0.9530309 0.9806179 0.8923972 0.9451830 0.9915662 0.9311679 0.8502639 0.9944261 0.5542958 0.9975463 0.8896603 0.8676236 0.7327968 0.1887221 0.8266525 0.9999914 0.8732761 0.9370639 0.9911562 0.9603313 0.9317075 0.8358660 0.9948754 0.9995601 0.9256614 0.9997001 0.3365756 0.9271325 0.9972321 0.9962590 0.9649491 0.9452492 0.4000554 0.9789069 0.9881831 0.9834098 0.9445416 0.8983963 0.9580159 0.9970051 0.9750311 0.9486145 0.9663744 0.9714338 0.8667263 0.9904200 0.9929007 0.9858394 0.9784330 0.8917311 0.5354862 0.9942672 0.9918803 0.9998053 0.9436064 0.8876644 0.8348811 0.8652251 0.9573147 0.9585381 0.7653055 0.9986812 0.8698055 0.7505626 0.9830258 0.9803512
skmisc/loess/tests/gas_data ADDED
@@ -0,0 +1,3 @@
1
+ E (observations)
2
+ 0.831000 1.045000 1.021000 0.970000 0.825000 0.891000 0.710000 0.801000 1.074000 1.148000 1.000000 0.928000 0.767000 0.701000 0.807000 0.902000 0.997000 1.224000 1.089000 0.973000 0.980000 0.665000 NOx (response)
3
+ 4.818000 2.849000 3.275000 4.691000 4.255000 5.064000 2.118000 4.602000 2.286000 0.970000 3.965000 5.344000 3.834000 1.990000 5.199000 5.283000 3.752000 0.537000 1.640000 5.055000 4.937000 1.561000
skmisc/loess/tests/gas_result ADDED
@@ -0,0 +1,10 @@
1
+ loess(&gas):
2
+ 4.883437 2.927639 3.572746 4.710510 4.815363 5.196193 2.512832 4.474939 2.149797 0.990044 4.089353 5.303627 3.864174 2.267121 4.575636 5.240293 4.154036 0.523682 1.853026 4.659184 4.521148 1.196414
3
+ loess(&gas_null):
4
+ 4.892690 3.362733 3.728575 4.489023 4.831715 5.177112 2.535887 4.530370 2.873000 1.453502 4.059136 5.052650 3.943568 2.265232 4.614320 5.163913 4.107184 -0.276342 2.604373 4.445040 4.351615 1.051719
5
+ predict(gas_fit_E, m, &gas, &gas_pred, 0):
6
+ 1.196414 5.068747 0.523682
7
+ pointwise(&gas_pred, m, coverage, &gas_ci):
8
+ 0.407208 1.196414 1.985621 3.249187 3.679498 4.109808 4.631187 5.055708 5.480229 4.704010 5.135260 5.566510 2.759703 3.143656 3.527609 0.683247 1.196932 1.710617 -0.424684 0.523682 1.472049
9
+ anova(&gas_null, &gas, &gas_anova):
10
+ 2.5531 15.663 10.1397 0.000860102
skmisc/loess/tests/madeup_data ADDED
@@ -0,0 +1,4 @@
1
+ one_two (observations)
2
+ -0.957581 -2.809549 -0.696511 3.451000 0.509260 0.557854 0.052582 -2.050644 -1.115675 -1.183665 0.511959 0.334364 -2.057062 -0.121897 0.544238 0.600502 0.531074 0.495400 -1.608602 0.277371 0.290464 0.579894 -0.290441 1.306226 -0.482898 -0.716423 0.742413 -0.911613 1.279436 -0.189153 0.592293 0.952416 0.491436 -0.305681 -0.363871 -0.285424 -0.037209 -0.923529 1.138054 -1.331223 0.551234 -0.852726 1.196875 0.498782 0.320180 0.212447 1.009358 -0.900989 1.132164 0.018867 0.424170 -0.198621 0.955170 0.948321 0.473848 -0.699121 -0.612853 0.580431 1.277996 0.806797 -1.038559 1.008663 -0.578257 -0.323245 -0.756302 1.386352 0.722419 -1.216078 -0.498280 0.726247 -0.260119 -0.741135 -0.184111 0.307762 0.464568 -0.252531 -0.486504 0.426634 -1.303969 0.067149 1.771176 0.907249 0.432350 1.419897 -0.413389 2.442025 0.041138 0.509505 -0.282744 0.179882 -1.188083 0.982653 -1.042886 1.181365 -0.398340 -1.335565 -0.502790 0.484762 -0.806446 1.412077 -0.878874 -0.935197 -0.339255 0.164497 1.370018 -1.494684 1.380505 0.885084 0.835609 0.896235 -1.289541 0.233203 1.183198 -0.857934 -1.334234 -0.923351 0.769146 -0.377948 0.059114 -1.870615 -0.677868 0.038185 0.375301 0.964717 0.695051 -0.342140 -1.145463 -0.993246 -0.130573 1.213711 0.291241 1.106891 0.949571 0.463675 0.455723 0.398786 -0.015849 -1.397373 0.770062 0.083291 0.531798 0.049727 -0.734140 -0.963487 0.573561 -0.281942 -0.594503 0.770262 1.073983 -0.615706 -0.084794 -0.491630 -1.526969 -0.196881 0.165653 0.198357 0.974930 -0.954848 0.588474 -0.426883 0.177119 -0.916442 -1.885139 0.086894 0.456306 0.174285 -0.001308 -0.000585 0.284023 -0.365679 -0.548867 0.857848 0.699094 -0.140026 1.332454 1.601795 0.012415 0.243429 1.077369 1.859246 0.185910 0.033342 0.613008 1.068595 -0.683305 -0.128826 -1.655525 0.013086 0.062454 0.773042 0.127046 0.408652 1.195438 -0.185558 -1.299714 0.899675 -0.033648 -1.544602 0.655203 -0.713935
3
+ response
4
+ 14.453553 6.622825 13.671414 14.197518 12.860530 12.522856 14.214638 7.924264 12.506938 13.734205 14.710855 13.596223 5.890019 13.558654 14.043167 13.931391 13.218920 17.090560 15.199322 13.261667 15.760636 12.083855 14.344907 12.609494 11.932959 13.408674 13.700765 13.013366 15.794999 14.600198 16.275751 11.564349 14.809023 12.982361 15.003502 14.737337 15.747677 11.674508 14.047278 14.666917 13.806240 13.611149 13.347149 14.225152 14.718846 14.217216 14.418058 14.719634 12.799716 13.933038 15.264603 14.660387 9.738691 14.443424 14.417284 15.184538 13.344938 15.372943 13.811554 15.103777 15.383834 14.368612 12.525202 14.325033 15.259658 13.004547 14.515988 15.176982 14.924187 13.872430 15.395366 13.428076 15.203430 14.186631 13.305833 14.074624 14.103092 13.499669 11.584675 14.264891 14.885616 13.967297 16.604680 10.367606 14.743473 16.308827 14.108673 13.590988 14.674546 15.294047 14.686723 13.611422 11.970270 13.884157 15.071776 12.589816 13.818745 14.245317 14.406530 14.347941
skmisc/loess/tests/madeup_result ADDED
@@ -0,0 +1,16 @@
1
+ loess(&madeup):
2
+ 13.898675 5.225583 14.265096 14.237045 13.366442 13.157273 14.189032 7.971348 13.215581 12.835208 13.967757 14.457845 6.039091 14.722007 13.758002 14.654508 14.243303 14.733353 13.696778 12.510036 15.026972 14.346972 14.547927 11.702517 14.222303 14.288345 13.755227 13.742749 14.250887 14.188543 14.388616 12.552611 14.100045 14.552719 14.514971 14.556744 14.496872 12.868609 12.871890 14.427522 14.410413 14.598345 13.415146 14.731999 14.657565 14.778805 13.988940 13.723749 11.932352 14.908485 14.457978 14.616147 11.100703 14.254687 14.411890 14.519007 13.734456 14.634786 13.080897 14.415189 14.623631 13.340049 12.584224 14.510466 14.293842 13.954341 14.281046 14.643596 14.492646 14.497077 14.497688 13.732467 14.573564 14.548255 13.560984 13.917026 14.496924 14.452028 11.687567 13.865395 13.908958 14.184016 14.514209 10.835782 14.203921 15.273614 13.702645 14.383224 14.506619 14.707063 14.595778 13.877506 12.326903 14.236236 13.962165 12.281695 14.477443 13.192765 13.985441 13.206705
3
+ loess(&madeup_new):
4
+ 12.874079 10.889912 14.072472 14.688408 13.581655 13.741506 12.966195 11.778153 12.623840 12.391277 13.915575 14.549806 10.648311 13.714716 13.908051 14.338239 13.839956 14.661187 14.500423 12.892713 14.344422 14.557473 14.294094 14.258892 13.410545 14.058327 14.340850 12.675257 14.839750 12.706903 14.551439 14.002773 13.589104 14.094192 14.098484 14.246415 14.548803 11.925623 14.212327 14.501013 14.199258 14.517379 15.151176 14.202325 14.044125 14.549456 15.030205 12.957176 14.170346 14.166684 14.617600 14.160491 14.230993 14.821136 14.547624 14.489024 12.630700 14.292239 14.381246 14.834949 14.480650 14.747398 11.611371 14.519760 13.997474 14.591257 14.591759 14.478131 14.427821 14.785485 14.034793 12.821834 13.556879 14.606041 13.505266 12.561710 14.525273 14.555914 11.728344 13.296039 14.621341 14.570526 14.015254 14.451527 13.670446 15.113971 12.849321 14.570355 14.526773 13.616773 14.493652 14.496696 11.739043 14.886699 12.740301 12.265455 14.504240 13.584999 13.370259 15.378514
5
+ loess(&madeup_new) (family = symmetric):
6
+ 13.853372 13.076392 14.410502 14.317606 13.530344 13.909561 13.483542 13.661465 13.738437 13.662424 14.078653 14.471725 13.362504 14.161261 14.056621 14.370400 13.827138 14.543779 14.563051 13.263340 14.405462 14.511807 14.391442 13.655949 13.919863 14.406599 14.307597 13.717301 14.561751 13.479815 14.423533 13.588048 13.644027 14.268385 14.283955 14.361030 14.528760 13.151054 13.826620 14.570806 14.120641 14.538117 14.640103 14.309962 14.069715 14.527437 14.606612 13.824681 13.607361 14.370144 14.535820 14.399329 14.122194 14.580712 14.478250 14.541334 13.593458 14.346338 14.016117 14.580121 14.566098 14.522580 12.578184 14.528995 14.305679 14.422916 14.523434 14.533691 14.490958 14.574831 14.352653 13.714577 13.911857 14.540189 13.522831 13.495538 14.528432 14.462617 13.481391 13.705501 14.399779 14.509204 14.010568 13.623165 14.211318 14.586042 13.392231 14.520972 14.525897 13.822231 14.577431 14.267078 13.423198 14.589490 13.573646 13.655627 14.531561 13.811793 13.979165 14.705119
7
+ loess(&madeup_new) (normalize = FALSE):
8
+ 13.853372 13.076392 14.410502 14.317606 13.530344 13.909561 13.483542 13.661465 13.738437 13.662424 14.078653 14.471725 13.362504 14.161261 14.056621 14.370400 13.827138 14.543779 14.563051 13.263340 14.405462 14.511807 14.391442 13.655949 13.919863 14.406599 14.307597 13.717301 14.561751 13.479815 14.423533 13.588048 13.644027 14.268385 14.283955 14.361030 14.528760 13.151054 13.826620 14.570806 14.120641 14.538117 14.640103 14.309962 14.069715 14.527437 14.606612 13.824681 13.607361 14.370144 14.535820 14.399329 14.122194 14.580712 14.478250 14.541334 13.593458 14.346338 14.016117 14.580121 14.566098 14.522580 12.578184 14.528995 14.305679 14.422916 14.523434 14.533691 14.490958 14.574831 14.352653 13.714577 13.911857 14.540189 13.522831 13.495538 14.528432 14.462617 13.481391 13.705501 14.399779 14.509204 14.010568 13.623165 14.211318 14.586042 13.392231 14.520972 14.525897 13.822231 14.577431 14.267078 13.423198 14.589490 13.573646 13.655627 14.531561 13.811793 13.979165 14.705119
9
+ predict(newdata1, m, &madeup, &madeup_pred, 0):
10
+ 8.156780 14.493587 14.854142
11
+ predict(newdata2, m, &madeup, &madeup_pred, 1):
12
+ 14.491811 14.389726
13
+ pointwise(&madeup_pred, m, coverage, &madeup_ci):
14
+ 13.761833 14.491811 15.221789 13.656419 14.389726 15.123034
15
+ anova(&madeup2, &madeup, &madeup_anova):
16
+ 6.45034 81.2319 2.85933 0.0121449
skmisc/loess/tests/test_loess.py ADDED
@@ -0,0 +1,284 @@
1
+ import pickle
2
+ import tempfile
3
+ from pathlib import Path
4
+
5
+ import numpy as np
6
+ import numpy.testing as npt
7
+ import pytest
8
+
9
+ from skmisc.loess import loess, loess_anova
10
+
11
+ data_path = Path(__file__).parent
12
+
13
+
14
+ def madeup_data():
15
+ dfile = data_path / 'madeup_data'
16
+ rfile = data_path / 'madeup_result'
17
+
18
+ with open(dfile, 'r') as f:
19
+ f.readline()
20
+ x = np.fromiter(
21
+ (float(v) for v in f.readline().rstrip().split()),
22
+ np.float64).reshape(-1, 2)
23
+ f.readline()
24
+ y = np.fromiter(
25
+ (float(v) for v in f.readline().rstrip().split()),
26
+ np.float64)
27
+
28
+ results = []
29
+ with open(rfile, 'r') as f:
30
+ for i in range(8):
31
+ f.readline()
32
+ z = np.fromiter(
33
+ (float(v) for v in f.readline().rstrip().split()),
34
+ np.float64)
35
+ results.append(z)
36
+
37
+ newdata1 = np.array([[-2.5, 0.], [2.5, 0.], [0., 0.]])
38
+ newdata2 = np.array([[-0.5, 0.5], [0., 0.]])
39
+ return (x, y, results, newdata1, newdata2)
40
+
41
+
42
+ def gas_data():
43
+ NOx = np.array([4.818, 2.849, 3.275, 4.691, 4.255, 5.064, 2.118, 4.602,
44
+ 2.286, 0.970, 3.965, 5.344, 3.834, 1.990, 5.199, 5.283,
45
+ 3.752, 0.537, 1.640, 5.055, 4.937, 1.561])
46
+ E = np.array([0.831, 1.045, 1.021, 0.970, 0.825, 0.891, 0.71, 0.801,
47
+ 1.074, 1.148, 1.000, 0.928, 0.767, 0.701, 0.807, 0.902,
48
+ 0.997, 1.224, 1.089, 0.973, 0.980, 0.665])
49
+ gas_fit_E = np.array([0.665, 0.949, 1.224])
50
+ newdata = np.array([0.6650000, 0.7581667, 0.8513333, 0.9445000,
51
+ 1.0376667, 1.1308333, 1.2240000])
52
+ alpha = 0.01
53
+
54
+ rfile = data_path / 'gas_result'
55
+ results = []
56
+ with open(rfile, 'r') as f:
57
+ for i in range(8):
58
+ f.readline()
59
+ z = np.fromiter(
60
+ (float(v) for v in f.readline().rstrip().split()),
61
+ np.float64)
62
+ results.append(z)
63
+ return (E, NOx, gas_fit_E, newdata, alpha, results)
64
+
65
+
66
+ class TestLoess2d(object):
67
+ "Test class for lowess."
68
+ d = madeup_data()
69
+
70
+ def test_2dbasic(self):
71
+ "2D standard"
72
+ (x, y, results, _, _) = self.d
73
+ madeup = loess(x, y)
74
+ madeup.model.span = 0.5
75
+ madeup.model.normalize = True
76
+ madeup.fit()
77
+ npt.assert_almost_equal(madeup.outputs.fitted_values, results[0], 5)
78
+ npt.assert_almost_equal(madeup.outputs.enp, 14.9, 1)
79
+ npt.assert_almost_equal(madeup.outputs.residual_scale, 0.9693, 4)
80
+
81
+ def test_2d_modflags(self):
82
+ "2D - modification of model flags"
83
+ (x, y, results, _, _) = self.d
84
+ madeup = loess(x, y)
85
+ madeup.model.span = 0.8
86
+ madeup.model.drop_square = [True, False]
87
+ madeup.model.parametric = [True, False]
88
+ npt.assert_equal(madeup.model.parametric[:2], [1, 0])
89
+ madeup.fit()
90
+ npt.assert_almost_equal(madeup.outputs.fitted_values, results[1], 5)
91
+ npt.assert_almost_equal(madeup.outputs.enp, 6.9, 1)
92
+ npt.assert_almost_equal(madeup.outputs.residual_scale, 1.4804, 4)
93
+
94
+ def test_2d_modfamily(self):
95
+ "2D - family modification"
96
+ (x, y, results, _, _) = self.d
97
+ madeup = loess(x, y)
98
+ madeup.model.span = 0.8
99
+ madeup.model.drop_square = [True, False]
100
+ madeup.model.parametric = [True, False]
101
+ madeup.model.family = "symmetric"
102
+ madeup.fit()
103
+ npt.assert_almost_equal(madeup.outputs.fitted_values, results[2], 5)
104
+ npt.assert_almost_equal(madeup.outputs.enp, 6.9, 1)
105
+ npt.assert_almost_equal(madeup.outputs.residual_scale, 1.0868, 4)
106
+
107
+ def test_2d_modnormalize(self):
108
+ "2D - normalization modification"
109
+ (x, y, results, _, _) = self.d
110
+ madeup = loess(x, y)
111
+ madeup.model.span = 0.8
112
+ madeup.model.drop_square = [True, False]
113
+ madeup.model.parametric = [True, False]
114
+ madeup.model.family = "symmetric"
115
+ madeup.model.normalize = False
116
+ madeup.fit()
117
+ npt.assert_almost_equal(madeup.outputs.fitted_values, results[3], 5)
118
+ npt.assert_almost_equal(madeup.outputs.enp, 6.9, 1)
119
+ npt.assert_almost_equal(madeup.outputs.residual_scale, 1.0868, 4)
120
+
121
+ def test_2d_pred_nostderr(self):
122
+ "2D prediction - no stderr"
123
+ (x, y, results, newdata1, _) = self.d
124
+ madeup = loess(x, y)
125
+ madeup.model.span = 0.5
126
+ madeup.model.normalize = True
127
+ prediction = madeup.predict(newdata1, stderror=False)
128
+ npt.assert_almost_equal(prediction.values, results[4], 5)
129
+ #
130
+ prediction = madeup.predict(newdata1, stderror=False)
131
+ npt.assert_almost_equal(prediction.values, results[4], 5)
132
+
133
+ def test_2d_pred_nodata(self):
134
+ "2D prediction - nodata"
135
+ (x, y, _, _, _) = self.d
136
+ madeup = loess(x, y)
137
+ try:
138
+ madeup.predict(None)
139
+ except ValueError:
140
+ pass
141
+ else:
142
+ raise AssertionError("The test should have failed")
143
+
144
+ def test_2d_pred_stderr(self):
145
+ "2D prediction - w/ stderr"
146
+ (x, y, results, _, newdata2) = self.d
147
+ madeup = loess(x, y)
148
+ madeup.model.span = 0.5
149
+ madeup.model.normalize = True
150
+ prediction = madeup.predict(newdata2, stderror=True)
151
+ npt.assert_almost_equal(prediction.values, results[5], 5)
152
+ npt.assert_almost_equal(prediction.stderr, [0.276746, 0.278009], 5)
153
+ npt.assert_almost_equal(prediction.residual_scale, 0.969302, 6)
154
+ npt.assert_almost_equal(prediction.df, 81.2319, 4)
155
+
156
+ # Direct access
157
+ prediction = madeup.predict(newdata2, stderror=True)
158
+ npt.assert_almost_equal(prediction.values, results[5], 5)
159
+ npt.assert_almost_equal(prediction.stderr, [0.276746, 0.278009], 5)
160
+ npt.assert_almost_equal(prediction.residual_scale, 0.969302, 6)
161
+ npt.assert_almost_equal(prediction.df, 81.2319, 4)
162
+
163
+ def test_2d_pred_confinv(self):
164
+ "2D prediction - confidence"
165
+ (x, y, results, _, newdata2) = self.d
166
+ madeup = loess(x, y)
167
+ madeup.model.span = 0.5
168
+ madeup.model.normalize = True
169
+ prediction = madeup.predict(newdata2, stderror=True)
170
+ ci = prediction.confidence(alpha=0.01)
171
+ npt.assert_almost_equal(ci.lower, results[6][::3], 5)
172
+ npt.assert_almost_equal(ci.fit, results[6][1::3], 5)
173
+ npt.assert_almost_equal(ci.upper, results[6][2::3], 5)
174
+
175
+
176
+ class TestLoessGas(object):
177
+ "Test class for lowess."
178
+
179
+ d = gas_data()
180
+
181
+ def test_1dbasic(self):
182
+ "Basic test 1d"
183
+ (E, NOx, _, _, _, results) = self.d
184
+ gas = loess(E, NOx)
185
+ gas.model.span = 2./3.
186
+ gas.fit()
187
+ npt.assert_almost_equal(gas.outputs.fitted_values, results[0], 6)
188
+ npt.assert_almost_equal(gas.outputs.enp, 5.5, 1)
189
+ npt.assert_almost_equal(gas.outputs.residual_scale, 0.3404, 4)
190
+
191
+ def test_1dbasic_alt(self):
192
+ "Basic test 1d - part #2"
193
+ (E, NOx, _, _, _, results) = self.d
194
+ gas_null = loess(E, NOx)
195
+ gas_null.model.span = 1.0
196
+ gas_null.fit()
197
+ npt.assert_almost_equal(gas_null.outputs.fitted_values, results[1], 6)
198
+ npt.assert_almost_equal(gas_null.outputs.enp, 3.5, 1)
199
+ npt.assert_almost_equal(gas_null.outputs.residual_scale, 0.5197, 4)
200
+
201
+ def test_1dpredict(self):
202
+ "Basic test 1d - prediction"
203
+ (E, NOx, gas_fit_E, _, _, results) = self.d
204
+ gas = loess(E, NOx, span=2./3.)
205
+ gas.fit()
206
+ predicted = gas.predict(gas_fit_E, stderror=False).values
207
+ npt.assert_almost_equal(predicted, results[2], 6)
208
+
209
+ def test_1dpredict_2(self):
210
+ "Basic test 1d - new predictions"
211
+ (E, NOx, _, newdata, _, results) = self.d
212
+ # gas = loess(E, NOx, span=2./3.)
213
+ gas = loess(E, NOx)
214
+ gas.model.span = 2./3.
215
+ prediction = gas.predict(newdata, stderror=True)
216
+ ci = prediction.confidence(alpha=0.01)
217
+ npt.assert_almost_equal(ci.lower, results[3][0::3], 6)
218
+ npt.assert_almost_equal(ci.fit, results[3][1::3], 6)
219
+ npt.assert_almost_equal(ci.upper, results[3][2::3], 6)
220
+
221
+ def test_anova(self):
222
+ "Tests anova"
223
+ (E, NOx, _, _, _, results) = self.d
224
+ gas = loess(E, NOx, span=2./3.)
225
+ gas.fit()
226
+ gas_null = loess(E, NOx, span=1.0)
227
+ gas_null.fit()
228
+ gas_anova = loess_anova(gas, gas_null)
229
+ gas_anova_theo = results[4]
230
+ npt.assert_almost_equal(gas_anova.dfn, gas_anova_theo[0], 5)
231
+ npt.assert_almost_equal(gas_anova.dfd, gas_anova_theo[1], 5)
232
+ npt.assert_almost_equal(gas_anova.F_value, gas_anova_theo[2], 5)
233
+ npt.assert_almost_equal(gas_anova.Pr_F, gas_anova_theo[3], 5)
234
+
235
+ def test_failures(self):
236
+ "Tests failures"
237
+ (E, NOx, gas_fit_E, _, _, _) = self.d
238
+ gas = loess(E, NOx, span=2./3.)
239
+ # This one should fail (all parametric)
240
+ gas.model.parametric = True
241
+ with pytest.raises(ValueError):
242
+ gas.fit()
243
+
244
+ # This one also (all drop_square)
245
+ gas.model.drop_square = True
246
+ with pytest.raises(ValueError):
247
+ gas.fit()
248
+
249
+ gas.model.degree = 1
250
+ with pytest.raises(ValueError):
251
+ gas.fit()
252
+
253
+ # This one should not (revert to std)
254
+ gas.model.parametric = False
255
+ gas.model.drop_square = False
256
+ gas.model.degree = 2
257
+ gas.fit()
258
+
259
+ # Now, for predict .................
260
+ prediction = gas.predict(gas_fit_E, stderror=False)
261
+ # This one should fail (extrapolation & blending)
262
+ with pytest.raises(ValueError):
263
+ gas.predict(prediction.values, stderror=False)
264
+
265
+ # But this one should not ..........
266
+ gas.predict(gas_fit_E, stderror=False)
267
+
268
+ def test_pickling(self):
269
+ rs = np.random.RandomState(seed=123)
270
+ n = 500
271
+ np.arange(n)
272
+ x = np.linspace(0, 500, n)
273
+ y = rs.randint(1, 1000, n)
274
+ lo = loess(y, x, span=0.3)
275
+ lo.fit()
276
+
277
+ # pickle lo, unpickle it as lo2 and compare
278
+ # predictions from both
279
+ with tempfile.TemporaryFile() as f:
280
+ pickle.dump(lo, f)
281
+ f.seek(0)
282
+ lo2 = pickle.load(f)
283
+
284
+ npt.assert_array_equal(lo.predict(x).values, lo2.predict(x).values)