scikit-learn-intelex 2024.7.0__py311-none-win_amd64.whl → 2025.0.1__py311-none-win_amd64.whl

scikit_learn_intelex-2025.0.1.data/data/Lib/site-packages/onedal/decomposition/tests/test_incremental_pca.py

@@ -0,0 +1,198 @@
+# ==============================================================================
+# Copyright 2024 Intel Corporation
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+# ==============================================================================
+
+import numpy as np
+import pytest
+from numpy.testing import assert_allclose
+
+from daal4py.sklearn._utils import daal_check_version
+from onedal.decomposition import IncrementalPCA
+from onedal.tests.utils._device_selection import get_queues
+
+
+@pytest.mark.parametrize("queue", get_queues())
+@pytest.mark.parametrize("is_deterministic", [True, False])
+@pytest.mark.parametrize("whiten", [True, False])
+@pytest.mark.parametrize("num_blocks", [1, 2, 3])
+@pytest.mark.parametrize("dtype", [np.float32, np.float64])
+def test_on_gold_data(queue, is_deterministic, whiten, num_blocks, dtype):
+    X = np.array([[-1, -1], [-2, -1], [-3, -2], [1, 1], [2, 1], [3, 2]])
+    X = X.astype(dtype=dtype)
+    X_split = np.array_split(X, num_blocks)
+    incpca = IncrementalPCA(is_deterministic=is_deterministic, whiten=whiten)
+
+    for i in range(num_blocks):
+        incpca.partial_fit(X_split[i], queue=queue)
+
+    result = incpca.finalize_fit()
+
+    transformed_data = incpca.predict(X, queue=queue)
+
+    expected_n_components_ = 2
+    expected_components_ = np.array([[0.83849224, 0.54491354], [-0.54491354, 0.83849224]])
+    expected_singular_values_ = np.array([6.30061232, 0.54980396])
+    expected_mean_ = np.array([0, 0])
+    expected_var_ = np.array([5.6, 2.4])
+    expected_explained_variance_ = np.array([7.93954312, 0.06045688])
+    expected_explained_variance_ratio_ = np.array([0.99244289, 0.00755711])
+    expected_transformed_data = (
+        np.array(
+            [
+                [-0.49096647, -1.19399271],
+                [-0.78854479, 1.02218579],
+                [-1.27951125, -0.17180692],
+                [0.49096647, 1.19399271],
+                [0.78854479, -1.02218579],
+                [1.27951125, 0.17180692],
+            ]
+        )
+        if whiten
+        else np.array(
+            [
+                [-1.38340578, -0.2935787],
+                [-2.22189802, 0.25133484],
+                [-3.6053038, -0.04224385],
+                [1.38340578, 0.2935787],
+                [2.22189802, -0.25133484],
+                [3.6053038, 0.04224385],
+            ]
+        )
+    )
+
+    tol = 1e-7
+    if transformed_data.dtype == np.float32:
+        tol = 7e-6 if whiten else 1e-6
+
+    assert result.n_components_ == expected_n_components_
+
+    assert_allclose(result.singular_values_, expected_singular_values_, atol=tol)
+    assert_allclose(result.mean_, expected_mean_, atol=tol)
+    assert_allclose(result.var_, expected_var_, atol=tol)
+    assert_allclose(result.explained_variance_, expected_explained_variance_, atol=tol)
+    assert_allclose(
+        result.explained_variance_ratio_, expected_explained_variance_ratio_, atol=tol
+    )
+    if is_deterministic and daal_check_version((2024, "P", 500)):
+        assert_allclose(result.components_, expected_components_, atol=tol)
+        assert_allclose(transformed_data, expected_transformed_data, atol=tol)
+    else:
+        for i in range(result.n_components_):
+            abs_dot_product = np.abs(
+                np.dot(result.components_[i], expected_components_[i])
+            )
+            assert np.abs(abs_dot_product - 1.0) < tol
+
+            if np.dot(result.components_[i], expected_components_[i]) < 0:
+                assert_allclose(
+                    -transformed_data[i], expected_transformed_data[i], atol=tol
+                )
+            else:
+                assert_allclose(
+                    transformed_data[i], expected_transformed_data[i], atol=tol
+                )
+
+
+@pytest.mark.parametrize("queue", get_queues())
+@pytest.mark.parametrize("n_components", [None, 1, 5])
+@pytest.mark.parametrize("whiten", [True, False])
+@pytest.mark.parametrize("num_blocks", [1, 10])
+@pytest.mark.parametrize("row_count", [100, 1000])
+@pytest.mark.parametrize("column_count", [10, 100])
+@pytest.mark.parametrize("dtype", [np.float32, np.float64])
+def test_on_random_data(
+    queue, n_components, whiten, num_blocks, row_count, column_count, dtype
+):
+    seed = 78
+    gen = np.random.default_rng(seed)
+    X = gen.uniform(low=-0.3, high=+0.7, size=(row_count, column_count))
+    X = X.astype(dtype=dtype)
+    X_split = np.array_split(X, num_blocks)
+    incpca = IncrementalPCA(n_components=n_components, whiten=whiten)
+
+    for i in range(num_blocks):
+        incpca.partial_fit(X_split[i], queue=queue)
+
+    incpca.finalize_fit()
+
+    transformed_data = incpca.predict(X, queue=queue)
+    tol = 3e-3 if transformed_data.dtype == np.float32 else 2e-6
+
+    n_components = incpca.n_components_
+    expected_n_samples_seen = X.shape[0]
+    expected_n_features_in = X.shape[1]
+    n_samples_seen = incpca.n_samples_seen_
+    n_features_in = incpca.n_features_in_
+    assert n_samples_seen == expected_n_samples_seen
+    assert n_features_in == expected_n_features_in
+
+    components = incpca.components_
+    singular_values = incpca.singular_values_
+    centered_data = X - np.mean(X, axis=0)
+    cov_eigenvalues, cov_eigenvectors = np.linalg.eig(
+        centered_data.T @ centered_data / (n_samples_seen - 1)
+    )
+    cov_eigenvalues = np.nan_to_num(cov_eigenvalues)
+    cov_eigenvalues[cov_eigenvalues < 0] = 0
+    eigenvalues_order = np.argsort(cov_eigenvalues)[::-1]
+    sorted_eigenvalues = cov_eigenvalues[eigenvalues_order]
+    sorted_eigenvectors = cov_eigenvectors[:, eigenvalues_order]
+    expected_singular_values = np.sqrt(sorted_eigenvalues * (n_samples_seen - 1))[
+        :n_components
+    ]
+    expected_components = sorted_eigenvectors.T[:n_components]
+
+    assert_allclose(singular_values, expected_singular_values, atol=tol)
+    for i in range(n_components):
+        component_length = np.dot(components[i], components[i])
+        assert np.abs(component_length - 1.0) < tol
+        abs_dot_product = np.abs(np.dot(components[i], expected_components[i]))
+        assert np.abs(abs_dot_product - 1.0) < tol
+
+    expected_mean = np.mean(X, axis=0)
+    assert_allclose(incpca.mean_, expected_mean, atol=tol)
+
+    expected_var_ = np.var(X, ddof=1, axis=0)
+    assert_allclose(incpca.var_, expected_var_, atol=tol)
+
+    expected_explained_variance = sorted_eigenvalues[:n_components]
+    assert_allclose(incpca.explained_variance_, expected_explained_variance, atol=tol)
+
+    expected_explained_variance_ratio = expected_explained_variance / np.sum(
+        sorted_eigenvalues
+    )
+    assert_allclose(
+        incpca.explained_variance_ratio_, expected_explained_variance_ratio, atol=tol
+    )
+
+    expected_noise_variance = (
+        np.mean(sorted_eigenvalues[n_components:])
+        if len(sorted_eigenvalues) > n_components
+        else 0.0
+    )
+    # TODO Fix noise variance computation (It is necessary to update C++ side)
+    # assert np.abs(incpca.noise_variance_ - expected_noise_variance) < tol
+
+    expected_transformed_data = centered_data @ components.T
+    if whiten:
+        scale = np.sqrt(incpca.explained_variance_)
+        min_scale = np.finfo(scale.dtype).eps
+        scale[scale < min_scale] = np.inf
+        expected_transformed_data /= scale
+
+    if daal_check_version((2024, "P", 500)) or not (
+        whiten and queue is not None and queue.sycl_device.device_type.name == "gpu"
+    ):
+        assert_allclose(transformed_data, expected_transformed_data, atol=tol)

scikit_learn_intelex-2025.0.1.data/data/Lib/site-packages/onedal/ensemble/__init__.py

@@ -0,0 +1,29 @@
+# ==============================================================================
+# Copyright 2023 Intel Corporation
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+# ==============================================================================
+
+from .forest import (
+    ExtraTreesClassifier,
+    ExtraTreesRegressor,
+    RandomForestClassifier,
+    RandomForestRegressor,
+)
+
+__all__ = [
+    "RandomForestClassifier",
+    "RandomForestRegressor",
+    "ExtraTreesClassifier",
+    "ExtraTreesRegressor",
+]