scdataloader 2.0.3__py3-none-any.whl → 2.0.5__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (12) hide show
  1. scdataloader/collator.py +99 -36
  2. scdataloader/config.py +1151 -0
  3. scdataloader/data.py +177 -39
  4. scdataloader/datamodule.py +222 -57
  5. scdataloader/preprocess.py +33 -24
  6. scdataloader/utils.py +31 -181
  7. {scdataloader-2.0.3.dist-info → scdataloader-2.0.5.dist-info}/METADATA +1 -1
  8. scdataloader-2.0.5.dist-info/RECORD +16 -0
  9. scdataloader-2.0.3.dist-info/RECORD +0 -16
  10. {scdataloader-2.0.3.dist-info → scdataloader-2.0.5.dist-info}/WHEEL +0 -0
  11. {scdataloader-2.0.3.dist-info → scdataloader-2.0.5.dist-info}/entry_points.txt +0 -0
  12. {scdataloader-2.0.3.dist-info → scdataloader-2.0.5.dist-info}/licenses/LICENSE +0 -0
scdataloader/config.py CHANGED
@@ -225,3 +225,1154 @@ MAIN_HUMAN_MOUSE_DEV_STAGE_MAP = {
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  "MmusDv:0000041", # unknown
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  ],
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  }
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+
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+ DROP = {
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+ "ENSG00000112096",
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+ "ENSG00000137808",
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+ "ENSG00000225932",
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1308
+ "ENSMUSG00000121850",
1309
+ "ENSMUSG00000121851",
1310
+ "ENSMUSG00000121852",
1311
+ "ENSMUSG00000121853",
1312
+ "ENSMUSG00000121854",
1313
+ "ENSMUSG00000121855",
1314
+ "ENSMUSG00000121856",
1315
+ "ENSMUSG00000121857",
1316
+ "ENSMUSG00000121858",
1317
+ "ENSMUSG00000121859",
1318
+ "ENSMUSG00000121860",
1319
+ "ENSMUSG00000121861",
1320
+ "ENSMUSG00000121862",
1321
+ "ENSMUSG00000121863",
1322
+ "ENSMUSG00000121864",
1323
+ "ENSMUSG00000121865",
1324
+ "ENSMUSG00000121866",
1325
+ "ENSMUSG00000121867",
1326
+ "ENSMUSG00000121868",
1327
+ "ENSMUSG00000121869",
1328
+ "ENSMUSG00000121870",
1329
+ "ENSMUSG00000121871",
1330
+ "ENSMUSG00000121872",
1331
+ "ENSMUSG00000121873",
1332
+ "ENSMUSG00000121874",
1333
+ "ENSMUSG00000121875",
1334
+ "ENSMUSG00000121876",
1335
+ "ENSMUSG00000121877",
1336
+ "ENSMUSG00000121878",
1337
+ "ENSMUSG00000121879",
1338
+ "ENSMUSG00000121880",
1339
+ "ENSMUSG00000121881",
1340
+ "ENSMUSG00000121882",
1341
+ "ENSMUSG00000121883",
1342
+ "ENSMUSG00000121884",
1343
+ "ENSMUSG00000121885",
1344
+ "ENSMUSG00000121886",
1345
+ "ENSMUSG00000121887",
1346
+ "ENSMUSG00000121888",
1347
+ "ENSMUSG00000121889",
1348
+ "ENSMUSG00000121890",
1349
+ "ENSMUSG00000121891",
1350
+ "ENSMUSG00000121892",
1351
+ "ENSMUSG00000121893",
1352
+ "ENSMUSG00000121894",
1353
+ "ENSMUSG00000121895",
1354
+ "ENSMUSG00000121896",
1355
+ "ENSMUSG00000121897",
1356
+ "ENSMUSG00000121898",
1357
+ "ENSMUSG00000121899",
1358
+ "ENSMUSG00000121900",
1359
+ "ENSMUSG00000121901",
1360
+ "ENSMUSG00000121902",
1361
+ "ENSMUSG00000121903",
1362
+ "ENSMUSG00000121904",
1363
+ "ENSMUSG00000121905",
1364
+ "ENSMUSG00000121906",
1365
+ "ENSMUSG00000121907",
1366
+ "ENSMUSG00000121908",
1367
+ "ENSMUSG00000121909",
1368
+ "ENSMUSG00000121910",
1369
+ "ENSMUSG00000121912",
1370
+ "ENSMUSG00000121913",
1371
+ "ENSMUSG00000121914",
1372
+ "ENSMUSG00000121915",
1373
+ "ENSMUSG00000121917",
1374
+ "ENSMUSG00000121918",
1375
+ "ENSMUSG00000121919",
1376
+ "ENSMUSG00000121920",
1377
+ "ENSMUSG00000121921",
1378
+ }