scdataloader 1.0.6__py3-none-any.whl → 1.1.3__py3-none-any.whl

scdataloader/VERSION

@@ -1 +1 @@
-1.0.5
+1.1.3

scdataloader/collator.py

@@ -161,7 +161,10 @@ class Collator:
                 raise ValueError("how must be either most expr or random expr")
             if (
                 (self.add_zero_genes > 0) or (self.max_len > len(nnz_loc))
-            ) and self.how not in ["all", "some"]:
+            ) and self.how not in [
+                "all",
+                "some",
+            ]:
                 zero_loc = np.where(expr == 0)[0]
                 zero_loc = zero_loc[
                     np.random.choice(

{scdataloader-1.0.6.dist-info → scdataloader-1.1.3.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: scdataloader
-Version: 1.0.6
+Version: 1.1.3
 Summary: a dataloader for single cell data in lamindb
 Home-page: https://github.com/jkobject/scDataLoader
 License: GPL3
@@ -13,7 +13,7 @@ Classifier: Programming Language :: Python :: 3.10
 Provides-Extra: dev
 Requires-Dist: anndata
 Requires-Dist: biomart
-Requires-Dist: bionty (==0.48.0)
+Requires-Dist: bionty (==0.49.0)
 Requires-Dist: black (>=23.10.1,<24.0.0) ; extra == "dev"
 Requires-Dist: cellxgene-census
 Requires-Dist: coverage (>=7.3.2,<8.0.0) ; extra == "dev"
@@ -23,7 +23,7 @@ Requires-Dist: flake8 (>=6.1.0,<7.0.0) ; extra == "dev"
 Requires-Dist: gitchangelog (>=3.0.4,<4.0.0) ; extra == "dev"
 Requires-Dist: ipykernel
 Requires-Dist: isort (>=5.12.0,<6.0.0) ; extra == "dev"
-Requires-Dist: lamindb (==0.75.1)
+Requires-Dist: lamindb (==0.76.3)
 Requires-Dist: leidenalg
 Requires-Dist: lightning
 Requires-Dist: matplotlib

{scdataloader-1.0.6.dist-info → scdataloader-1.1.3.dist-info}/RECORD

@@ -1,16 +1,16 @@
-scdataloader/VERSION,sha256=jFS_q38a6b0acUjq5B57Co9K03JuDKxw-COi1F255gw,6
+scdataloader/VERSION,sha256=Xa4MCl7Tzap4cE4luzjXLDEBgxHpMyg9Bu1PkzYL_Gw,6
 scdataloader/__init__.py,sha256=lbO3lGiXXgirB07KXj1Fu0BzL7T43VmitqJBTyfSz7M,147
 scdataloader/__main__.py,sha256=db_upDq3tNEtcDH17mPIczToAqGkSKfLy0Qbj6B4YmE,6385
 scdataloader/base.py,sha256=M1gD59OffRdLOgS1vHKygOomUoAMuzjpRtAfM3SBKF8,338
-scdataloader/collator.py,sha256=O5VK2asIfFIQc-Ozm55Bc-OORIlPj_yOt7qn6xqXd74,11292
+scdataloader/collator.py,sha256=mr-rvrwJKIHU7D_Wo6wp0PxEQz0YDHXQmVv25X4FHmU,11339
 scdataloader/config.py,sha256=rrW2DZxG4J2_pmpDbXXsaKJkpNC57w5dIlItiFbANYw,2905
 scdataloader/data.py,sha256=3a9jUhREIzbxC797COGNSn6QqbRiiC30FzxXCoYsTNo,13773
 scdataloader/datamodule.py,sha256=JZq8g274ce3ARW59qwg5GKAt2SzOTaMPGh3CySGQS70,16893
 scdataloader/mapped.py,sha256=s_Fg-lwaXjHFyQcKnp9El2IceMoaEajynyUgOnpVnXQ,20750
 scdataloader/preprocess.py,sha256=9dgsq7c5jD2l-CUGfwC2uG98MCIgnrYFkqknqAyu5dU,28841
 scdataloader/utils.py,sha256=8YIVpqJzNKkIIpAS5p01gyt57X2CrfaMEsC1EJs-q_A,21451
-scdataloader-1.0.6.dist-info/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
-scdataloader-1.0.6.dist-info/METADATA,sha256=LhqbssiiI5Y-GZeYk1nXnHFNo2SNhuc6W9LwlIX_OCo,43336
-scdataloader-1.0.6.dist-info/WHEEL,sha256=d2fvjOD7sXsVzChCqf0Ty0JbHKBaLYwDbGQDwQTnJ50,88
-scdataloader-1.0.6.dist-info/entry_points.txt,sha256=nLqucZaa5wiF7-1FCgMXO916WDQ9Qm0TcxQp0f1DwE4,59
-scdataloader-1.0.6.dist-info/RECORD,,
+scdataloader-1.1.3.dist-info/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
+scdataloader-1.1.3.dist-info/METADATA,sha256=iP0RqNPV7itL3bneX10dZQVbJlG57qRYlbmNHzxCvm4,43336
+scdataloader-1.1.3.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
+scdataloader-1.1.3.dist-info/entry_points.txt,sha256=nLqucZaa5wiF7-1FCgMXO916WDQ9Qm0TcxQp0f1DwE4,59
+scdataloader-1.1.3.dist-info/RECORD,,

{scdataloader-1.0.6.dist-info → scdataloader-1.1.3.dist-info}/WHEEL

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: poetry-core 1.7.0
+Generator: poetry-core 1.9.0
 Root-Is-Purelib: true
 Tag: py3-none-any