scatterscale 0.0.1__py3-none-any.whl
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scatterscale/__init__.py
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scatterscale/outliers.py
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import numpy as np
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def handle_outliers(dist, sigma_value=10, treatment='reassign'):
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"""
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Function to identify and handle outlier values in the distribution,
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which would drastically change the scaling of the colorbar if not addressed.
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Inputs
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-------
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dist: 1d float array
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data to be represented by the colorbar.
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sigma_value: int, default 10
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number of stddev to use when identifying outliers, if using the sigma method.
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treatment: str, default='reassign'
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how to treat the identified outliers. options are 'reassign' and 'mask_out'.
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Outputs
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-------
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modified_dist: 1d float array
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data to be represented by the colorbar, treated for outliers according to the specifications.
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"""
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median = np.median(dist)
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# center the gaussian at the median of the distribution
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stddev = np.std(dist, mean=median)
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lower_bound = median - sigma_value * stddev
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upper_bound = median + sigma_value * stddev
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upper_outliers = dist > upper_bound
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lower_outliers = dist < lower_bound
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# choose the method to treat outliers
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if treatment == 'reassign':
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# make a deep copy
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dist_modified = np.copy(dist)
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dist_modified[upper_outliers] = upper_bound
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dist_modified[lower_outliers] = lower_bound
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elif treatment == 'mask_out':
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dist_modified = dist[~upper_outliers & ~lower_outliers]
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return dist_modified
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Metadata-Version: 2.4
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Name: scatterscale
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Version: 0.0.1
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Summary: Automatically determine the best scaling for your scatterplot's colorbar.
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Author-email: Juliana Karp <jsmkarp@uw.edu>, Anavi Uppal <anuppal@ucsc.edu>
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Maintainer-email: Juliana Karp <jsmkarp@uw.edu>, Anavi Uppal <anuppal@ucsc.edu>
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License-Expression: MIT
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Project-URL: Repository, https://github.com/juliana-karp/scatterscale.git
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Requires-Python: >=3.8
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Description-Content-Type: text/markdown
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Requires-Dist: numpy
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Requires-Dist: matplotlib
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Requires-Dist: scipy
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Requires-Dist: pandas
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# scatterscale
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automate the choice of normalizing scale for your scatterplot's colorbar
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scatterscale/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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scatterscale/outliers.py,sha256=u6tam5lOeI_tfFk5YEBFFqOraMrkGW-wgVCJlcnWkXM,1447
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scatterscale-0.0.1.dist-info/METADATA,sha256=zXSIuO32-MCR5sS1vnhtL11hDTKJS5QUpmtkzHpvcAM,635
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scatterscale-0.0.1.dist-info/WHEEL,sha256=aeYiig01lYGDzBgS8HxWXOg3uV61G9ijOsup-k9o1sk,91
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scatterscale-0.0.1.dist-info/top_level.txt,sha256=3DR_g-n3eVBuJNQCL-Rr1zzGGNuPn0qNOuD2_jzEOTA,13
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scatterscale-0.0.1.dist-info/RECORD,,
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scatterscale
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