sapiopycommons 2025.7.9a582__py3-none-any.whl → 2025.7.9a583__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of sapiopycommons might be problematic. Click here for more details.

Files changed (59) hide show
  1. sapiopycommons/callbacks/callback_util.py +665 -332
  2. sapiopycommons/callbacks/field_builder.py +2 -0
  3. sapiopycommons/chem/IndigoMolecules.py +29 -1
  4. sapiopycommons/chem/Molecules.py +3 -3
  5. sapiopycommons/customreport/auto_pagers.py +26 -1
  6. sapiopycommons/customreport/term_builder.py +1 -1
  7. sapiopycommons/datatype/pseudo_data_types.py +349 -326
  8. sapiopycommons/eln/experiment_cache.py +188 -0
  9. sapiopycommons/eln/experiment_handler.py +408 -767
  10. sapiopycommons/eln/experiment_report_util.py +11 -6
  11. sapiopycommons/eln/experiment_step_factory.py +476 -0
  12. sapiopycommons/eln/plate_designer.py +7 -2
  13. sapiopycommons/eln/step_creation.py +236 -0
  14. sapiopycommons/files/file_util.py +7 -5
  15. sapiopycommons/general/accession_service.py +2 -2
  16. sapiopycommons/general/aliases.py +3 -1
  17. sapiopycommons/general/audit_log.py +7 -0
  18. sapiopycommons/general/custom_report_util.py +12 -0
  19. sapiopycommons/general/data_structure_util.py +115 -0
  20. sapiopycommons/processtracking/custom_workflow_handler.py +11 -1
  21. sapiopycommons/processtracking/endpoints.py +27 -0
  22. sapiopycommons/recordmodel/record_handler.py +783 -389
  23. sapiopycommons/rules/eln_rule_handler.py +8 -1
  24. sapiopycommons/rules/on_save_rule_handler.py +8 -1
  25. sapiopycommons/webhook/webhook_handlers.py +9 -4
  26. sapiopycommons/webhook/webservice_handlers.py +2 -2
  27. {sapiopycommons-2025.7.9a582.dist-info → sapiopycommons-2025.7.9a583.dist-info}/METADATA +2 -2
  28. sapiopycommons-2025.7.9a583.dist-info/RECORD +68 -0
  29. sapiopycommons/ai/__init__.py +0 -0
  30. sapiopycommons/ai/api/fielddefinitions/proto/fields_pb2.py +0 -43
  31. sapiopycommons/ai/api/fielddefinitions/proto/fields_pb2.pyi +0 -31
  32. sapiopycommons/ai/api/fielddefinitions/proto/fields_pb2_grpc.py +0 -24
  33. sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2.py +0 -123
  34. sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2.pyi +0 -598
  35. sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2_grpc.py +0 -24
  36. sapiopycommons/ai/api/plan/proto/step_output_pb2.py +0 -45
  37. sapiopycommons/ai/api/plan/proto/step_output_pb2.pyi +0 -42
  38. sapiopycommons/ai/api/plan/proto/step_output_pb2_grpc.py +0 -24
  39. sapiopycommons/ai/api/plan/proto/step_pb2.py +0 -43
  40. sapiopycommons/ai/api/plan/proto/step_pb2.pyi +0 -43
  41. sapiopycommons/ai/api/plan/proto/step_pb2_grpc.py +0 -24
  42. sapiopycommons/ai/api/plan/script/proto/script_pb2.py +0 -55
  43. sapiopycommons/ai/api/plan/script/proto/script_pb2.pyi +0 -115
  44. sapiopycommons/ai/api/plan/script/proto/script_pb2_grpc.py +0 -153
  45. sapiopycommons/ai/api/plan/tool/proto/entry_pb2.py +0 -57
  46. sapiopycommons/ai/api/plan/tool/proto/entry_pb2.pyi +0 -96
  47. sapiopycommons/ai/api/plan/tool/proto/entry_pb2_grpc.py +0 -24
  48. sapiopycommons/ai/api/plan/tool/proto/tool_pb2.py +0 -67
  49. sapiopycommons/ai/api/plan/tool/proto/tool_pb2.pyi +0 -220
  50. sapiopycommons/ai/api/plan/tool/proto/tool_pb2_grpc.py +0 -154
  51. sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2.py +0 -39
  52. sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2.pyi +0 -32
  53. sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2_grpc.py +0 -24
  54. sapiopycommons/ai/protobuf_utils.py +0 -508
  55. sapiopycommons/ai/test_client.py +0 -251
  56. sapiopycommons/ai/tool_service_base.py +0 -798
  57. sapiopycommons-2025.7.9a582.dist-info/RECORD +0 -92
  58. {sapiopycommons-2025.7.9a582.dist-info → sapiopycommons-2025.7.9a583.dist-info}/WHEEL +0 -0
  59. {sapiopycommons-2025.7.9a582.dist-info → sapiopycommons-2025.7.9a583.dist-info}/licenses/LICENSE +0 -0
@@ -1,92 +0,0 @@
1
- sapiopycommons/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
2
- sapiopycommons/ai/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
3
- sapiopycommons/ai/protobuf_utils.py,sha256=5Y0z_lRVipbHPJcHJf9GosK-ZjAh_I2JI3QwV8iyfKg,24884
4
- sapiopycommons/ai/test_client.py,sha256=8AlRTuy7XUC40aU4SgTQkNc_ZBp_ANhVNEKbUx8ABRM,10430
5
- sapiopycommons/ai/tool_service_base.py,sha256=8it0853p-kw3Y1SdEyEfmxCbxM3_poUTJKFUaZ5MrCQ,35366
6
- sapiopycommons/ai/api/fielddefinitions/proto/fields_pb2.py,sha256=YcZjb_YM-XeLErM8hEC_S7vGMVGvcXAMGs2b-u5zvOE,2377
7
- sapiopycommons/ai/api/fielddefinitions/proto/fields_pb2.pyi,sha256=FwtXmNAf7iYGEFm4kbqb04v77jNHbZg18ZmEDhle_bU,1444
8
- sapiopycommons/ai/api/fielddefinitions/proto/fields_pb2_grpc.py,sha256=wPImJPdCUZNVEVoUWzsba9kGIXjEKPdUkawP5SnVyiU,932
9
- sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2.py,sha256=nWC91vR2pMgMUyNOZRZ0YiuL1-8ntnjXLqt1daxsD34,20869
10
- sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2.pyi,sha256=U5zXrbBxsWilLTsRWJd1TqjdjLKFsr3enF9OJ8GfyWw,34028
11
- sapiopycommons/ai/api/fielddefinitions/proto/velox_field_def_pb2_grpc.py,sha256=4vD4jWanaJ4uclSkFmS7JIz_lwYXDWBE3DomuPjUyII,941
12
- sapiopycommons/ai/api/plan/proto/step_output_pb2.py,sha256=JpBZSyoYyPTEaaXjW664PeJNK0zxV1mly_kp5re42z4,2661
13
- sapiopycommons/ai/api/plan/proto/step_output_pb2.pyi,sha256=yuxOYnDZ9DRuu-TLzaKOW_B4LUiYxTrNc2AbssXg4kE,2022
14
- sapiopycommons/ai/api/plan/proto/step_output_pb2_grpc.py,sha256=vDRY_pIIshQ4UpdW-ra1F5zBmntdsW2scySkMAA-zfc,925
15
- sapiopycommons/ai/api/plan/proto/step_pb2.py,sha256=nL976oTFdX4ih4gg7_J-8eFoGB69tFvERB2gT3L2-6s,2439
16
- sapiopycommons/ai/api/plan/proto/step_pb2.pyi,sha256=QPIcsjcUvEGQkdZMUMiVzFFNDl8yOUe_qJtf5XEp5Ck,2062
17
- sapiopycommons/ai/api/plan/proto/step_pb2_grpc.py,sha256=DgiBYFvTNiDG_2a9Tpt5iel2fRUfePZWP41fZTC-KWk,918
18
- sapiopycommons/ai/api/plan/script/proto/script_pb2.py,sha256=D668fAG3dAvE8ijCzaflj7o6D5M5szW4X8Wq-8EYxBU,4712
19
- sapiopycommons/ai/api/plan/script/proto/script_pb2.pyi,sha256=VS9WXKcGuUj6ulziLxhgEBMRXP-QgHlFeMISDDOhAQY,7174
20
- sapiopycommons/ai/api/plan/script/proto/script_pb2_grpc.py,sha256=RkShHpe_d5EJHk3qp-or1JpvSEqShb7cCiaXnJ2YSww,6931
21
- sapiopycommons/ai/api/plan/tool/proto/entry_pb2.py,sha256=A-ufAWwbJ0odVXBZBQKvke6LYPijPl2dpb2IFRaXmPE,4124
22
- sapiopycommons/ai/api/plan/tool/proto/entry_pb2.pyi,sha256=NNBrdHz5PzAuUEXuGgTU4THy9rx8Sr9iGTb65QtVH4Q,4589
23
- sapiopycommons/ai/api/plan/tool/proto/entry_pb2_grpc.py,sha256=YKkX2kexERUx4asLCShufSnZhgf339Zk8Xw1FAgLfHQ,924
24
- sapiopycommons/ai/api/plan/tool/proto/tool_pb2.py,sha256=jrSgsSx8mGPWuxYPxOom7l925bavWaX4NEQAkC9niJo,6854
25
- sapiopycommons/ai/api/plan/tool/proto/tool_pb2.pyi,sha256=KzOmH-ic0anjRta4jhScMRCOI1OtO5rSZrQDr_W3eZ0,15992
26
- sapiopycommons/ai/api/plan/tool/proto/tool_pb2_grpc.py,sha256=68u5E1ZKha5frP5GuY8Ad-c0c79vBhtfnj5Q4u-8xOY,6982
27
- sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2.py,sha256=WKzNi-d5dqeJbmEXUVE5qJ4Qm34HmsqRXRtXih382g8,2100
28
- sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2.pyi,sha256=vLYA8Tkzq2AwgVadoUp5vAg4HgGlgga0kzeS3e_XkCQ,1621
29
- sapiopycommons/ai/api/session/proto/sapio_conn_info_pb2_grpc.py,sha256=2W0YzT4SfnGTLq98AdvkyNM0n75Tkl8DervPS1ryGao,932
30
- sapiopycommons/callbacks/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
31
- sapiopycommons/callbacks/callback_util.py,sha256=sz76LzD9sVLPMcoOpmzPe1aILGXcpHfyZ-qex8oR11c,130849
32
- sapiopycommons/callbacks/field_builder.py,sha256=p2XacN99MuKk3ite8GAqstUMpixqugul2CsC4gB83-o,38620
33
- sapiopycommons/chem/IndigoMolecules.py,sha256=slM2y39zZFHc468c366EqR8T-GYJ24UnM9HWAqWFEwQ,3900
34
- sapiopycommons/chem/Molecules.py,sha256=5PzRyE1s-Z3nfwh3Y4dCNdQOIJGhog08wyZvgTkKwyU,12384
35
- sapiopycommons/chem/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
36
- sapiopycommons/customreport/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
37
- sapiopycommons/customreport/auto_pagers.py,sha256=3-XXWrP7r41a_Y-8YLPnfm0s65m4qEEUqu4azX47oPI,14828
38
- sapiopycommons/customreport/column_builder.py,sha256=0RO53e9rKPZ07C--KcepN6_tpRw_FxF3O9vdG0ilKG8,3014
39
- sapiopycommons/customreport/custom_report_builder.py,sha256=BlTxZ4t1sfZA2Ciur1EfYvkZxHxJ7ADwYNAe2zwiN0c,7176
40
- sapiopycommons/customreport/term_builder.py,sha256=PNp71NF1vFxidk5v6uQNi9oQR9KJIk8WfhyntvvZN-U,18573
41
- sapiopycommons/datatype/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
42
- sapiopycommons/datatype/attachment_util.py,sha256=N-nhsJ0oxa_Ft6Y6VWeNFYLzfuQqsjhHA6_-yIt2wVw,3596
43
- sapiopycommons/datatype/data_fields.py,sha256=pczUlEcE0TeHEDU0Gkvu7voacSLPXCB7l9UbI1Tb6V0,5656
44
- sapiopycommons/datatype/pseudo_data_types.py,sha256=6TG7aJxgmUZ8FQkWBcgmbK5oy7AFFNtKOPpi1w1OOYA,27657
45
- sapiopycommons/eln/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
46
- sapiopycommons/eln/experiment_handler.py,sha256=FeqmjnxN5WyDDstN3_AMSo9r7nQi-5zou4m-3K5JsYM,123363
47
- sapiopycommons/eln/experiment_report_util.py,sha256=NNNNPVD3_2ZAjoOqCMOnlnmPD0SCjDcgYi453ATSJBs,37027
48
- sapiopycommons/eln/experiment_tags.py,sha256=7-fpOiSqrjbXmWIJhEhaxMgLsVCPAtKqH8xRzpDVKoE,356
49
- sapiopycommons/eln/plate_designer.py,sha256=ix2cflz13PAHyu4deS3d5Qd3kQXk0C7IQxBQ2Dm9fEM,13692
50
- sapiopycommons/files/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
51
- sapiopycommons/files/complex_data_loader.py,sha256=T39veNhvYl6j_uZjIIJ8Mk5Aa7otR5RB-g8XlAdkksA,1421
52
- sapiopycommons/files/file_bridge.py,sha256=vKbqxPexi15epr_-_qLrEfYoxNxB031mXN92iVtOMqE,9511
53
- sapiopycommons/files/file_bridge_handler.py,sha256=SEYDIQhSCmjI6qyLdDJE8JVKSd0WYvF7JvAq_Ahp9Do,25503
54
- sapiopycommons/files/file_data_handler.py,sha256=f96MlkMuQhUCi4oLnzJK5AiuElCp5jLI8_sJkZVwpws,36779
55
- sapiopycommons/files/file_util.py,sha256=w4Q7zYJb9YaPxrecmT4RT_OOibKMRP0NI1CyoOLfAP4,31747
56
- sapiopycommons/files/file_validator.py,sha256=ryg22-93csmRO_Pv0ZpWphNkB74xWZnHyJ23K56qLj0,28761
57
- sapiopycommons/files/file_writer.py,sha256=hACVl0duCjP28gJ1NPljkjagNCLod0ygUlPbvUmRDNM,17605
58
- sapiopycommons/flowcyto/flow_cyto.py,sha256=vs9WhXXKz3urpjL8QKSk56B-NSmQR3O3x_WFBKoeO10,3227
59
- sapiopycommons/flowcyto/flowcyto_data.py,sha256=mYKFuLbtpJ-EsQxLGtu4tNHVlygTxKixgJxJqD68F58,2596
60
- sapiopycommons/general/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
61
- sapiopycommons/general/accession_service.py,sha256=QeNGd78Zr08ezWpThTuAkxO4bXusEcp5x9jJRZRwliA,13483
62
- sapiopycommons/general/aliases.py,sha256=alc2R5TOSKbZif3pcGZ706y23Y9F4HQPC-Kj4xJZ_Us,14503
63
- sapiopycommons/general/audit_log.py,sha256=KQq0PsvukUoE3l6TQb3-vpu5-MbSINpWlnQ9e7jojPg,8743
64
- sapiopycommons/general/custom_report_util.py,sha256=NwwmejSQLwSbrndEk1gPyFNYk9GZoS7Wrp9ab9moFgw,18014
65
- sapiopycommons/general/directive_util.py,sha256=7SeQrd2Ye5JHlXZtJZaVGgtaSLdq_Vm9EObuxf44Pz8,3905
66
- sapiopycommons/general/exceptions.py,sha256=aPlzK1cvxeMU5UsokYlLrIBGltUfJZ7LH8zvLh9DxpI,3233
67
- sapiopycommons/general/html_formatter.py,sha256=HE3OeGgwOw6x53zGSc4-UzP4-JoOmQIz3pX-DzNVg94,17138
68
- sapiopycommons/general/popup_util.py,sha256=HKILegU1uCL_6abNlNL0Wn3xgX2JNa_kJeq7e5CZu6Q,31923
69
- sapiopycommons/general/sapio_links.py,sha256=YkcVKNLrSGoM7tCCXBAsIbIxylctwdcEyhePrRMODe0,2859
70
- sapiopycommons/general/storage_util.py,sha256=ovmK_jN7v09BoX07XxwShpBUC5WYQOM7dbKV_VeLXJU,8892
71
- sapiopycommons/general/time_util.py,sha256=jU1urPoZRv6evNucR0-288EyT4PrsDpCr-H1-7BKq9A,12363
72
- sapiopycommons/multimodal/multimodal.py,sha256=PFaGJPbKvW__tnxb8KkgkJZOKjQdgxF_kGfD5chet1s,6779
73
- sapiopycommons/multimodal/multimodal_data.py,sha256=0BeVPr9HaC0hNTF1v1phTIKGruvNnwerHsD994qJKBg,15099
74
- sapiopycommons/processtracking/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
75
- sapiopycommons/processtracking/custom_workflow_handler.py,sha256=QZVRDUXpHfYIKD9LtaOcOt0Sr3RGDaeGQb-LZYAgkCc,25117
76
- sapiopycommons/processtracking/endpoints.py,sha256=w5bziI2xC7450M95rCF8JpRwkoni1kEDibyAux9B12Q,10848
77
- sapiopycommons/recordmodel/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
78
- sapiopycommons/recordmodel/record_handler.py,sha256=aPbR3OS0RlsKOGztY-LZaOmkXKUB8ZTw3qqdJKXwd6U,70872
79
- sapiopycommons/rules/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
80
- sapiopycommons/rules/eln_rule_handler.py,sha256=1aC88brATcjL1O0Hd2hQ0XNguKsKh8xELXComotk3mQ,10772
81
- sapiopycommons/rules/on_save_rule_handler.py,sha256=J1YKjOGA1KUTwpnZMa7oIi5QU_4mBJrPygSHNDsMIIA,10539
82
- sapiopycommons/samples/aliquot.py,sha256=mWOJUqaQh0t3HklNuGdmuV7D5zzXs6fpLwtDdM6_XTo,3018
83
- sapiopycommons/sftpconnect/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
84
- sapiopycommons/sftpconnect/sftp_builder.py,sha256=lFK3FeXk-sFLefW0hqY8WGUQDeYiGaT6yDACzT_zFgQ,3015
85
- sapiopycommons/webhook/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
86
- sapiopycommons/webhook/webhook_context.py,sha256=D793uLsb1691SalaPnBUk3rOSxn_hYLhdvkaIxjNXss,1909
87
- sapiopycommons/webhook/webhook_handlers.py,sha256=L0HetSm43NvA5KyW3xbLpGFh2DbAaeZJVtXIEl2fvV8,39689
88
- sapiopycommons/webhook/webservice_handlers.py,sha256=Y5dHx_UFWFuSqaoPL6Re-fsKYRuxvCWZ8bj6KSZ3jfM,14285
89
- sapiopycommons-2025.7.9a582.dist-info/METADATA,sha256=HBCsgpHoxOvmMOEjgVaJ8QFBOYbCWTpP8Ctd8N4rWf8,3142
90
- sapiopycommons-2025.7.9a582.dist-info/WHEEL,sha256=C2FUgwZgiLbznR-k0b_5k3Ai_1aASOXDss3lzCUsUug,87
91
- sapiopycommons-2025.7.9a582.dist-info/licenses/LICENSE,sha256=HyVuytGSiAUQ6ErWBHTqt1iSGHhLmlC8fO7jTCuR8dU,16725
92
- sapiopycommons-2025.7.9a582.dist-info/RECORD,,