rwe 0.0.2__py3-none-any.whl → 0.0.3__py3-none-any.whl

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Files changed (7) hide show
  1. rwe/clients/aou.py +1 -1
  2. rwe/parsers/aou/config.py +1 -1
  3. {rwe-0.0.2.dist-info → rwe-0.0.3.dist-info}/METADATA +1 -1
  4. {rwe-0.0.2.dist-info → rwe-0.0.3.dist-info}/RECORD +7 -7
  5. {rwe-0.0.2.dist-info → rwe-0.0.3.dist-info}/WHEEL +0 -0
  6. {rwe-0.0.2.dist-info → rwe-0.0.3.dist-info}/licenses/LICENSE +0 -0
  7. {rwe-0.0.2.dist-info → rwe-0.0.3.dist-info}/top_level.txt +0 -0
rwe/clients/aou.py CHANGED
@@ -162,7 +162,7 @@ def generate_aou_labs_measurements_report(doc: Document, chrm: str, gene: str, z
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  res_df = run_parallel(numerical_measurements_df, measurements=measurements, n_jobs=None, chunksize=20)
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  # TODO: add most significant measurements table to doc
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  for k,v in MEASUREMENT_GROUPS.items():
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- f, a = plot_measurements(numerical_measurements_df, v, multiplier=5, col="median_value", res_df=res_df)
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+ f, a = plot_measurements(numerical_measurements_df, v, col="median_value", res_df=res_df)
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  fig_path = uth._save_fig_to_tmp(f, basename=f"aou_measurements_{k}", dpi=300)
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  doc.add_paragraph() # spacing
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  doc.add_picture(fig_path, width=Inches(6.5))
rwe/parsers/aou/config.py CHANGED
@@ -61,7 +61,7 @@ PLAUSIBLE = {
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  # --- Liver / protein balance (AoU typical units: albumin g/L, protein g/L, enzymes U/L, bilirubin mg/dL OR umol/L; range is loose) ---
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  "Albumin [Mass/volume] in Serum or Plasma": (15, 60), # g/L
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- "Protein [Mass/volume] in Serum or Plasma": (40, 100), # g/L
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+ "Protein [Mass/volume] in Serum or Plasma": (3, 12), # g/dL
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  "Alanine aminotransferase [Enzymatic activity/volume] in Serum or Plasma": (0, 1000), # U/L
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  "Aspartate aminotransferase [Enzymatic activity/volume] in Serum or Plasma": (0, 1000), # U/L
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  "Alkaline phosphatase [Enzymatic activity/volume] in Serum or Plasma": (10, 2000), # U/L
{rwe-0.0.2.dist-info → rwe-0.0.3.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: rwe
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- Version: 0.0.2
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+ Version: 0.0.3
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  Summary: Real World Evidence utilities and reporting
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  Author: Deepro Banerjee
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  License: MIT License
{rwe-0.0.2.dist-info → rwe-0.0.3.dist-info}/RECORD RENAMED
@@ -2,14 +2,14 @@ rwe/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  rwe/generate_report.py,sha256=-NbQJ4H-NYdDzziWMoi5PUWyhZ7p8iVC8UXYUP1v_xY,1833
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  rwe/assets/Arrowhead_Pharmaceuticals_logo.png,sha256=C2mAn6GG4gArds4sBnqM5LcxhuZgujXjwGiZxIuxbLo,51053
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  rwe/clients/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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- rwe/clients/aou.py,sha256=vhjoUZAVZUl5K_mSJLYg3x8OvNi4gAMdwWEYXlycR9k,9401
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+ rwe/clients/aou.py,sha256=XVvRArzcTTBO0JmiTtWvuiafTuzpupaZJBb1Mtt8QIQ,9387
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  rwe/clients/azn.py,sha256=6zwEv0IAgBA-FcI2glGerA9M6pzdKQx7M5M4HZI8HQs,7541
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  rwe/clients/genebass.py,sha256=OkF0_J4lmiujWlffsBlAM3uKxKOCzi7_3f_ehju_tPE,6103
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  rwe/clients/hgnc.py,sha256=ZabNiMgzwu4rCVCptbgUb38qHsL9cHlsQX7s6mZA8Nk,2015
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  rwe/parsers/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  rwe/parsers/aou/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  rwe/parsers/aou/collect.py,sha256=3j9S0vg3s5u-lJYhP9gdJA_SJVUTUld-i8M1mS-qg-0,13610
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- rwe/parsers/aou/config.py,sha256=_BdQohVgSeLNIkoLBQ4XIgo2ucep6NDU8k0vGKgONj8,27018
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+ rwe/parsers/aou/config.py,sha256=7O8NhrxOAeDJnKYsiQBgufNkxo_O6nRPSrhJ49pteLk,27017
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  rwe/parsers/aou/process.py,sha256=q-H12OQdwBZMqWxuDo389m6WCJb9Qsp5ZIwVc2MHqu4,3683
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  rwe/plots/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  rwe/plots/clinical.py,sha256=dBgdrFog-4gWJyJphoObSuoPtS7Q4wOprWyXMcDD6Dw,7738
@@ -20,8 +20,8 @@ rwe/plots/variant_info.py,sha256=KLUnefwmSxcmOn7mkNBcxvJdpNN4i4F9SZ0SZGlNrvk,536
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  rwe/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  rwe/utils/helpers.py,sha256=t3fmx2OsFx3fvg2uZggagm5LS-PE7J3Yr7Ew3VJUsnA,4336
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  rwe/utils/report.py,sha256=Vyfle1aOoCkqtVeBHAzCdb6hgR0sQZn_qQ4szUw_A3w,4658
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- rwe-0.0.2.dist-info/licenses/LICENSE,sha256=0PfJPAoyFVWY4L80aEcQyjy4PojxzfqcOenSuXdhgBg,1072
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- rwe-0.0.2.dist-info/METADATA,sha256=1lz1eESuIy78YTClKI8Kug_f7AKq57QWDxfYSKjGfcs,23601
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- rwe-0.0.2.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
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- rwe-0.0.2.dist-info/top_level.txt,sha256=zwX0M3dfnEfklZqvvBPQXiJykChpiqt219EolC3WFRc,4
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- rwe-0.0.2.dist-info/RECORD,,
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+ rwe-0.0.3.dist-info/licenses/LICENSE,sha256=0PfJPAoyFVWY4L80aEcQyjy4PojxzfqcOenSuXdhgBg,1072
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+ rwe-0.0.3.dist-info/METADATA,sha256=huTbgeLgndyhlIZHX4qOEPQi-jNFCpfRUPF2FM__EZI,23601
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+ rwe-0.0.3.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
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+ rwe-0.0.3.dist-info/top_level.txt,sha256=zwX0M3dfnEfklZqvvBPQXiJykChpiqt219EolC3WFRc,4
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+ rwe-0.0.3.dist-info/RECORD,,
{rwe-0.0.2.dist-info → rwe-0.0.3.dist-info}/WHEEL RENAMED
File without changes