roms-tools 2.6.0__py3-none-any.whl → 2.6.2__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (613) hide show
  1. roms_tools/analysis/roms_output.py +218 -10
  2. roms_tools/analysis/utils.py +41 -9
  3. roms_tools/download.py +1 -0
  4. roms_tools/regrid.py +9 -2
  5. roms_tools/setup/boundary_forcing.py +92 -70
  6. roms_tools/setup/datasets.py +232 -272
  7. roms_tools/setup/initial_conditions.py +70 -34
  8. roms_tools/setup/river_forcing.py +20 -14
  9. roms_tools/setup/surface_forcing.py +19 -3
  10. roms_tools/setup/utils.py +221 -40
  11. roms_tools/tests/test_analysis/test_roms_output.py +55 -0
  12. roms_tools/tests/test_setup/test_boundary_forcing.py +119 -36
  13. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/.zattrs +14 -0
  14. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/.zgroup +3 -0
  15. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/.zmetadata +4456 -0
  16. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_east/.zarray +24 -0
  17. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_east/.zattrs +10 -0
  18. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_east/0.0.0 +0 -0
  19. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_north/.zarray +24 -0
  20. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_north/.zattrs +10 -0
  21. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_north/0.0.0 +0 -0
  22. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_south/.zarray +24 -0
  23. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_south/.zattrs +10 -0
  24. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_south/0.0.0 +0 -0
  25. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_west/.zarray +24 -0
  26. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_west/.zattrs +10 -0
  27. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_ALT_CO2_west/0.0.0 +0 -0
  28. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_east/.zarray +24 -0
  29. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_east/.zattrs +10 -0
  30. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_east/0.0.0 +0 -0
  31. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_north/.zarray +24 -0
  32. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_north/.zattrs +10 -0
  33. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_north/0.0.0 +0 -0
  34. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_south/.zarray +24 -0
  35. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_south/.zattrs +10 -0
  36. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_south/0.0.0 +0 -0
  37. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_west/.zarray +24 -0
  38. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_west/.zattrs +10 -0
  39. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/ALK_west/0.0.0 +0 -0
  40. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_east/.zarray +24 -0
  41. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_east/.zattrs +10 -0
  42. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_east/0.0.0 +0 -0
  43. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_north/.zarray +24 -0
  44. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_north/.zattrs +10 -0
  45. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_north/0.0.0 +0 -0
  46. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_south/.zarray +24 -0
  47. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_south/.zattrs +10 -0
  48. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_south/0.0.0 +0 -0
  49. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_west/.zarray +24 -0
  50. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_west/.zattrs +10 -0
  51. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_ALT_CO2_west/0.0.0 +0 -0
  52. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_east/.zarray +24 -0
  53. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_east/.zattrs +10 -0
  54. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_east/0.0.0 +0 -0
  55. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_north/.zarray +24 -0
  56. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_north/.zattrs +10 -0
  57. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_north/0.0.0 +0 -0
  58. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_south/.zarray +24 -0
  59. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_south/.zattrs +10 -0
  60. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_south/0.0.0 +0 -0
  61. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_west/.zarray +24 -0
  62. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_west/.zattrs +10 -0
  63. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DIC_west/0.0.0 +0 -0
  64. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_east/.zarray +24 -0
  65. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_east/.zattrs +10 -0
  66. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_east/0.0.0 +0 -0
  67. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_north/.zarray +24 -0
  68. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_north/.zattrs +10 -0
  69. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_north/0.0.0 +0 -0
  70. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_south/.zarray +24 -0
  71. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_south/.zattrs +10 -0
  72. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_south/0.0.0 +0 -0
  73. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_west/.zarray +24 -0
  74. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_west/.zattrs +10 -0
  75. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOC_west/0.0.0 +0 -0
  76. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_east/.zarray +24 -0
  77. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_east/.zattrs +10 -0
  78. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_east/0.0.0 +0 -0
  79. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_north/.zarray +24 -0
  80. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_north/.zattrs +10 -0
  81. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_north/0.0.0 +0 -0
  82. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_south/.zarray +24 -0
  83. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_south/.zattrs +10 -0
  84. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_south/0.0.0 +0 -0
  85. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_west/.zarray +24 -0
  86. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_west/.zattrs +10 -0
  87. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DOCr_west/0.0.0 +0 -0
  88. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_east/.zarray +24 -0
  89. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_east/.zattrs +10 -0
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  91. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_north/.zarray +24 -0
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  94. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_unified_climatology.zarr/DON_south/.zarray +24 -0
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  587. roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/{river_location → river_fraction}/.zattrs +1 -1
  588. roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_fraction/0.0 +0 -0
  589. roms_tools/tests/test_setup/test_data/{river_forcing_with_bgc.zarr/river_location → river_forcing_no_climatology.zarr/river_index}/.zattrs +1 -1
  590. roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_index/0.0 +0 -0
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  597. roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_index/0.0 +0 -0
  598. roms_tools/tests/test_setup/test_datasets.py +2 -0
  599. roms_tools/tests/test_setup/test_initial_conditions.py +112 -25
  600. roms_tools/tests/test_setup/test_river_forcing.py +4 -3
  601. roms_tools/tests/test_setup/test_surface_forcing.py +67 -41
  602. roms_tools/tests/test_setup/test_validation.py +6 -0
  603. roms_tools/tests/test_vertical_coordinate.py +73 -0
  604. roms_tools/vertical_coordinate.py +6 -0
  605. {roms_tools-2.6.0.dist-info → roms_tools-2.6.2.dist-info}/METADATA +1 -3
  606. {roms_tools-2.6.0.dist-info → roms_tools-2.6.2.dist-info}/RECORD +611 -31
  607. roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/river_location/0.0 +0 -0
  608. roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_location/0.0 +0 -0
  609. /roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/{river_location → river_fraction}/.zarray +0 -0
  610. /roms_tools/tests/test_setup/test_data/{river_forcing_with_bgc.zarr/river_location → river_forcing_no_climatology.zarr/river_index}/.zarray +0 -0
  611. {roms_tools-2.6.0.dist-info → roms_tools-2.6.2.dist-info}/WHEEL +0 -0
  612. {roms_tools-2.6.0.dist-info → roms_tools-2.6.2.dist-info}/licenses/LICENSE +0 -0
  613. {roms_tools-2.6.0.dist-info → roms_tools-2.6.2.dist-info}/top_level.txt +0 -0
{roms_tools-2.6.0.dist-info → roms_tools-2.6.2.dist-info}/RECORD RENAMED
@@ -1,42 +1,43 @@
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  ci/environment-with-xesmf.yml,sha256=c8x2YFBBpZvy6pnlUMTO1-8myyKsVm0Y-IWPigT3PKo,217
2
2
  ci/environment.yml,sha256=Ehxy6nYiVQXoS7EGlmNm2G0ZPHg6VFBGY1IflApIhIY,207
3
3
  roms_tools/__init__.py,sha256=jRghiteCoPjJvJjkFI36ocGyqzcTN5m-5eCa_DNQ9Dw,988
4
- roms_tools/download.py,sha256=W6S_DFVJDXat2w9MfyyHyushrswbpUI2hxegSuua1XE,6248
4
+ roms_tools/download.py,sha256=eOwuI7I2FtHNuMsoHNMr2yCeQhR3ItyVGjml0gO9XrA,6360
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5
  roms_tools/plot.py,sha256=33ft1wN0kc_vIvyy_sIoY-nc0k4THXWLc_k7wEavNq8,17578
6
- roms_tools/regrid.py,sha256=BNtsJS5Oxmg0ivDQ-MLgVumeeLX15LZ7cp_RHAhUIOI,10222
6
+ roms_tools/regrid.py,sha256=av9fROSNxlDeczOB544zUjFRUTiUKO42wbfZ90mpuD0,10476
7
7
  roms_tools/utils.py,sha256=eveBkWuDsXNJADFMWFgRMHdbXkZlTyVK9dN2YAnjYJ4,13323
8
- roms_tools/vertical_coordinate.py,sha256=txObO4Duf-8Ef2r4JgK3C1PsDmaF7KeRngDTKx7MPHg,7034
9
- roms_tools/analysis/roms_output.py,sha256=Wm91jUICcmKFOaayt7ADWUopowBcfuh2dyk6Id65ICo,27915
10
- roms_tools/analysis/utils.py,sha256=RwV7SDBjx-pzJOJ7fG3q0qwfbwXThkcI6wAgeIe1bzY,5431
8
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@@ -975,7 +1552,7 @@ roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/tracer_n
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  roms_tools/tests/test_setup/test_data/river_forcing_no_climatology.zarr/tracer_name/0,sha256=m5RTy6Ka6ScsKdL_pma6qpevroqCf8LJzuYXCFl9Mds,48
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  roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/.zgroup,sha256=I4N0bme0vMJ2Kz8QDwbD-i1fFJq1qOXaXTNSFGSgGVk,24
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- roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/.zmetadata,sha256=FZTi-ZnRzmPH_XNilKJIiDIbJ9clP29eBHwKFgMxiEY,6901
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/.zmetadata,sha256=kRWFhVI-Iwt06JQ_VG-Dnqj2FdgOcEybrdjLt3EZ4j8,7638
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@@ -985,9 +1562,12 @@ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/month/0,sha256
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- roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_location/.zarray,sha256=jYVuViCHVLNS6VB-K_4O32zkhyPcFnoUdLM8pA1nGXk,339
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- roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_location/.zattrs,sha256=Ulaw9zPnPcNer1cdhavwQtQ_tUPPTDzTrQGcHP8u9y4,149
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- roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_location/0.0,sha256=_gdp3GhMsDlFGIuL7bmmlXcm1aD6AFF1fAmIjanpwWI,196
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_fraction/.zarray,sha256=jYVuViCHVLNS6VB-K_4O32zkhyPcFnoUdLM8pA1nGXk,339
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_fraction/.zattrs,sha256=CA-yjrAQXABB7k-co60a6J2BoQfQpzPYNWhMQlLoxzo,135
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_fraction/0.0,sha256=PZyjb4Lpfz_I4EQg3OvAFNDfdUh9altcQopMHtXF0MQ,190
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_index/.zarray,sha256=jYVuViCHVLNS6VB-K_4O32zkhyPcFnoUdLM8pA1nGXk,339
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_index/.zattrs,sha256=RHQeew7YvVa5QylX1Ukp3OPoRq8H03nwMRJG_PrvNEI,122
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+ roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_index/0.0,sha256=tGBbm6_EcNkKcxDQ5j6x-j1bvghA6HW773MjKk0qlqo,196
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  roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_name/.zarray,sha256=IiztAgS5VBT0bsRnDObags8I7F_tyQbMajEszHXfHb8,364
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  roms_tools/tests/test_setup/test_data/river_forcing_with_bgc.zarr/river_name/.zattrs,sha256=EPrut8rW6fC_MGEIOeqFacMyRlxf36MZsFCgP-nZ9d4,84
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@@ -1065,8 +1645,8 @@ roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/v_Re/.zattrs,sha256=2z7
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  roms_tools/tests/test_setup/test_data/tidal_forcing.zarr/v_Re/0.0.0,sha256=33Gl8otBmgqVarmAnZuEqTYS2_hVJUJh-iN1HzvaDuo,96
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  roms_tools/tests/test_tiling/test_partition.py,sha256=b6EepZndVDv1B6Qt5_MbDfrFF2LtR0BF7i1t30xHEvA,7977
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  roms_tools/tiling/partition.py,sha256=ZxDNGIKXZf_7eEzw9cxGP2XR_WBhZ4WCeIMl7_IdskA,12302
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- roms_tools-2.6.0.dist-info/licenses/LICENSE,sha256=yiff76E4xRioW2bHhlPpyYpstmePQBx2bF8HhgQhSsg,11318
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- roms_tools-2.6.0.dist-info/METADATA,sha256=QehIrzcMOtZk3NgvS1nFrp2ZvQfMrI9IgQUFiErw1b4,4698
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- roms_tools-2.6.0.dist-info/WHEEL,sha256=CmyFI0kx5cdEMTLiONQRbGQwjIoR1aIYB7eCAQ4KPJ0,91
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- roms_tools-2.6.0.dist-info/top_level.txt,sha256=aAf4T4nYQSkay5iKJ9kmTjlDgd4ETdp9OSlB4sJdt8Y,19
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- roms_tools-2.6.0.dist-info/RECORD,,
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+ roms_tools-2.6.2.dist-info/licenses/LICENSE,sha256=yiff76E4xRioW2bHhlPpyYpstmePQBx2bF8HhgQhSsg,11318
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+ roms_tools-2.6.2.dist-info/METADATA,sha256=9BAwDfT3FYvpjQG44ty97Am8PVDKWeeTX3U9LwNLF3w,4696
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+ roms_tools-2.6.2.dist-info/WHEEL,sha256=CmyFI0kx5cdEMTLiONQRbGQwjIoR1aIYB7eCAQ4KPJ0,91
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+ roms_tools-2.6.2.dist-info/top_level.txt,sha256=aAf4T4nYQSkay5iKJ9kmTjlDgd4ETdp9OSlB4sJdt8Y,19
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+ roms_tools-2.6.2.dist-info/RECORD,,