roms-tools 1.6.2__py3-none-any.whl → 1.7.0__py3-none-any.whl

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spFe_south/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "southern boundary small phytoplankton iron",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spFe_west/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "eta_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "western boundary small phytoplankton iron",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spP_east/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "eta_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "eastern boundary small phytoplankton phosphorous",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spP_north/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "northern boundary small phytoplankton phosphorous",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spP_south/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "southern boundary small phytoplankton phosphorous",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spP_west/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "eta_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "western boundary small phytoplankton phosphorous",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/zooC_east/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "eta_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "eastern boundary zooplankton carbon",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/zooC_north/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "northern boundary zooplankton carbon",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/zooC_south/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "southern boundary zooplankton carbon",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/zooC_west/.zattrs

@@ -4,7 +4,7 @@
         "s_rho",
         "eta_rho"
     ],
-    "coordinates": "abs_time",
+    "coordinates": "abs_time month",
     "long_name": "western boundary zooplankton carbon",
     "units": "mmol/m^3"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/.zattrs

@@ -3,7 +3,7 @@
     "correct_radiation": "False",
     "end_time": "2020-02-01 00:00:00",
     "model_reference_date": "2000-01-01 00:00:00",
-    "roms_tools_version": "0.1.dev157+dirty",
+    "roms_tools_version": "0.1.dev169+dirty",
     "source": "CESM_REGRIDDED",
     "start_time": "2020-02-01 00:00:00",
     "title": "ROMS surface forcing file created by ROMS-Tools",

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/.zmetadata

@@ -5,7 +5,7 @@
             "correct_radiation": "False",
             "end_time": "2020-02-01 00:00:00",
             "model_reference_date": "2000-01-01 00:00:00",
-            "roms_tools_version": "0.1.dev157+dirty",
+            "roms_tools_version": "0.1.dev169+dirty",
             "source": "CESM_REGRIDDED",
             "start_time": "2020-02-01 00:00:00",
             "title": "ROMS surface forcing file created by ROMS-Tools",
@@ -40,6 +40,7 @@
                 "time"
             ],
             "calendar": "proleptic_gregorian",
+            "long_name": "absolute time",
             "units": "days since 2000-01-16 00:00:00"
         },
         "dust/.zarray": {
@@ -72,7 +73,7 @@
                 "eta_rho",
                 "xi_rho"
             ],
-            "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+            "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
             "long_name": "dust decomposition",
             "units": "kg/m^2/s"
         },
@@ -101,7 +102,7 @@
                 "time"
             ],
             "cycle_length": 365.25,
-            "long_name": "days since 2000-01-01 00:00:00",
+            "long_name": "relative time: days since 2000-01-01 00:00:00",
             "units": "days"
         },
         "iron/.zarray": {
@@ -134,7 +135,7 @@
                 "eta_rho",
                 "xi_rho"
             ],
-            "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+            "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
             "long_name": "iron decomposition",
             "units": "nmol/cm^2/s"
         },
@@ -163,9 +164,35 @@
                 "time"
             ],
             "cycle_length": 365.25,
-            "long_name": "days since 2000-01-01 00:00:00",
+            "long_name": "relative time: days since 2000-01-01 00:00:00",
             "units": "days"
         },
+        "month/.zarray": {
+            "chunks": [
+                12
+            ],
+            "compressor": {
+                "blocksize": 0,
+                "clevel": 5,
+                "cname": "lz4",
+                "id": "blosc",
+                "shuffle": 1
+            },
+            "dtype": "<i8",
+            "fill_value": null,
+            "filters": null,
+            "order": "C",
+            "shape": [
+                12
+            ],
+            "zarr_format": 2
+        },
+        "month/.zattrs": {
+            "_ARRAY_DIMENSIONS": [
+                "time"
+            ],
+            "long_name": "Month index (1-12)"
+        },
         "nhy/.zarray": {
             "chunks": [
                 12,
@@ -196,7 +223,7 @@
                 "eta_rho",
                 "xi_rho"
             ],
-            "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+            "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
             "long_name": "NHy decomposition",
             "units": "kg/m^2/s"
         },
@@ -225,7 +252,7 @@
                 "time"
             ],
             "cycle_length": 365.25,
-            "long_name": "days since 2000-01-01 00:00:00",
+            "long_name": "relative time: days since 2000-01-01 00:00:00",
             "units": "days"
         },
         "nox/.zarray": {
@@ -258,7 +285,7 @@
                 "eta_rho",
                 "xi_rho"
             ],
-            "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+            "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
             "long_name": "NOx decomposition",
             "units": "kg/m^2/s"
         },
@@ -287,7 +314,7 @@
                 "time"
             ],
             "cycle_length": 365.25,
-            "long_name": "days since 2000-01-01 00:00:00",
+            "long_name": "relative time: days since 2000-01-01 00:00:00",
             "units": "days"
         },
         "pco2_air/.zarray": {
@@ -320,7 +347,7 @@
                 "eta_rho",
                 "xi_rho"
             ],
-            "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+            "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
             "long_name": "atmospheric pCO2",
             "units": "ppmv"
         },
@@ -354,7 +381,7 @@
                 "eta_rho",
                 "xi_rho"
             ],
-            "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+            "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
             "long_name": "atmospheric pCO2, alternative CO2",
             "units": "ppmv"
         },
@@ -383,7 +410,7 @@
                 "time"
             ],
             "cycle_length": 365.25,
-            "long_name": "days since 2000-01-01 00:00:00",
+            "long_name": "relative time: days since 2000-01-01 00:00:00",
             "units": "days"
         }
     },

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/abs_time/.zattrs

@@ -3,5 +3,6 @@
         "time"
     ],
     "calendar": "proleptic_gregorian",
+    "long_name": "absolute time",
     "units": "days since 2000-01-16 00:00:00"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/dust/.zattrs

@@ -4,7 +4,7 @@
         "eta_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+    "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
     "long_name": "dust decomposition",
     "units": "kg/m^2/s"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/dust_time/.zattrs

@@ -3,6 +3,6 @@
         "time"
     ],
     "cycle_length": 365.25,
-    "long_name": "days since 2000-01-01 00:00:00",
+    "long_name": "relative time: days since 2000-01-01 00:00:00",
     "units": "days"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/iron/.zattrs

@@ -4,7 +4,7 @@
         "eta_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+    "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
     "long_name": "iron decomposition",
     "units": "nmol/cm^2/s"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/iron_time/.zattrs

@@ -3,6 +3,6 @@
         "time"
     ],
     "cycle_length": 365.25,
-    "long_name": "days since 2000-01-01 00:00:00",
+    "long_name": "relative time: days since 2000-01-01 00:00:00",
     "units": "days"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/month/.zarray

@@ -0,0 +1,20 @@
+{
+    "chunks": [
+        12
+    ],
+    "compressor": {
+        "blocksize": 0,
+        "clevel": 5,
+        "cname": "lz4",
+        "id": "blosc",
+        "shuffle": 1
+    },
+    "dtype": "<i8",
+    "fill_value": null,
+    "filters": null,
+    "order": "C",
+    "shape": [
+        12
+    ],
+    "zarr_format": 2
+}

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/month/.zattrs

@@ -0,0 +1,6 @@
+{
+    "_ARRAY_DIMENSIONS": [
+        "time"
+    ],
+    "long_name": "Month index (1-12)"
+}

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/nhy/.zattrs

@@ -4,7 +4,7 @@
         "eta_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+    "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
     "long_name": "NHy decomposition",
     "units": "kg/m^2/s"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/nhy_time/.zattrs

@@ -3,6 +3,6 @@
         "time"
     ],
     "cycle_length": 365.25,
-    "long_name": "days since 2000-01-01 00:00:00",
+    "long_name": "relative time: days since 2000-01-01 00:00:00",
     "units": "days"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/nox/.zattrs

@@ -4,7 +4,7 @@
         "eta_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+    "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
     "long_name": "NOx decomposition",
     "units": "kg/m^2/s"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/nox_time/.zattrs

@@ -3,6 +3,6 @@
         "time"
     ],
     "cycle_length": 365.25,
-    "long_name": "days since 2000-01-01 00:00:00",
+    "long_name": "relative time: days since 2000-01-01 00:00:00",
     "units": "days"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/pco2_air/.zattrs

@@ -4,7 +4,7 @@
         "eta_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+    "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
     "long_name": "atmospheric pCO2",
     "units": "ppmv"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/pco2_air_alt/.zattrs

@@ -4,7 +4,7 @@
         "eta_rho",
         "xi_rho"
     ],
-    "coordinates": "abs_time dust_time iron_time nhy_time nox_time pco2_time",
+    "coordinates": "abs_time dust_time iron_time month nhy_time nox_time pco2_time",
     "long_name": "atmospheric pCO2, alternative CO2",
     "units": "ppmv"
 }

roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/pco2_time/.zattrs

@@ -3,6 +3,6 @@
         "time"
     ],
     "cycle_length": 365.25,
-    "long_name": "days since 2000-01-01 00:00:00",
+    "long_name": "relative time: days since 2000-01-01 00:00:00",
     "units": "days"
 }

roms_tools/tests/test_setup/test_data/river_forcing.zarr/.zattrs

@@ -0,0 +1,3 @@
+{
+    "climatology": "True"
+}

roms_tools/tests/test_setup/test_data/river_forcing.zarr/.zgroup

@@ -0,0 +1,3 @@
+{
+    "zarr_format": 2
+}

roms_tools/tests/test_setup/test_data/river_forcing.zarr/.zmetadata

@@ -0,0 +1,214 @@
+{
+    "metadata": {
+        ".zattrs": {
+            "climatology": "True"
+        },
+        ".zgroup": {
+            "zarr_format": 2
+        },
+        "abs_time/.zarray": {
+            "chunks": [
+                12
+            ],
+            "compressor": {
+                "blocksize": 0,
+                "clevel": 5,
+                "cname": "lz4",
+                "id": "blosc",
+                "shuffle": 1
+            },
+            "dtype": "<i8",
+            "fill_value": null,
+            "filters": null,
+            "order": "C",
+            "shape": [
+                12
+            ],
+            "zarr_format": 2
+        },
+        "abs_time/.zattrs": {
+            "_ARRAY_DIMENSIONS": [
+                "river_time"
+            ],
+            "calendar": "proleptic_gregorian",
+            "long_name": "absolute time",
+            "units": "days since 2000-01-16 00:00:00"
+        },
+        "month/.zarray": {
+            "chunks": [
+                12
+            ],
+            "compressor": {
+                "blocksize": 0,
+                "clevel": 5,
+                "cname": "lz4",
+                "id": "blosc",
+                "shuffle": 1
+            },
+            "dtype": "<i8",
+            "fill_value": null,
+            "filters": null,
+            "order": "C",
+            "shape": [
+                12
+            ],
+            "zarr_format": 2
+        },
+        "month/.zattrs": {
+            "_ARRAY_DIMENSIONS": [
+                "river_time"
+            ],
+            "long_name": "Month index (1-12)"
+        },
+        "river_name/.zarray": {
+            "chunks": [
+                6
+            ],
+            "compressor": {
+                "blocksize": 0,
+                "clevel": 5,
+                "cname": "lz4",
+                "id": "blosc",
+                "shuffle": 1
+            },
+            "dtype": "|O",
+            "fill_value": null,
+            "filters": [
+                {
+                    "id": "vlen-utf8"
+                }
+            ],
+            "order": "C",
+            "shape": [
+                6
+            ],
+            "zarr_format": 2
+        },
+        "river_name/.zattrs": {
+            "_ARRAY_DIMENSIONS": [
+                "nriver"
+            ],
+            "long_name": "River name"
+        },
+        "river_time/.zarray": {
+            "chunks": [
+                12
+            ],
+            "compressor": {
+                "blocksize": 0,
+                "clevel": 5,
+                "cname": "lz4",
+                "id": "blosc",
+                "shuffle": 1
+            },
+            "dtype": "<f8",
+            "fill_value": "NaN",
+            "filters": null,
+            "order": "C",
+            "shape": [
+                12
+            ],
+            "zarr_format": 2
+        },
+        "river_time/.zattrs": {
+            "_ARRAY_DIMENSIONS": [
+                "river_time"
+            ],
+            "cycle_length": 365.25,
+            "long_name": "relative time: days since 2000-01-01 00:00:00",
+            "units": "days"
+        },
+        "river_tracer/.zarray": {
+            "chunks": [
+                12,
+                2,
+                6
+            ],
+            "compressor": {
+                "blocksize": 0,
+                "clevel": 5,
+                "cname": "lz4",
+                "id": "blosc",
+                "shuffle": 1
+            },
+            "dtype": "<f4",
+            "fill_value": "NaN",
+            "filters": null,
+            "order": "C",
+            "shape": [
+                12,
+                2,
+                6
+            ],
+            "zarr_format": 2
+        },
+        "river_tracer/.zattrs": {
+            "_ARRAY_DIMENSIONS": [
+                "river_time",
+                "ntracers",
+                "nriver"
+            ],
+            "coordinates": "abs_time month river_name tracer_name",
+            "long_name": "River tracer data",
+            "units": "degrees C [temperature]; psu [salinity]"
+        },
+        "river_volume/.zarray": {
+            "chunks": [
+                12,
+                6
+            ],
+            "compressor": {
+                "blocksize": 0,
+                "clevel": 5,
+                "cname": "lz4",
+                "id": "blosc",
+                "shuffle": 1
+            },
+            "dtype": "<f4",
+            "fill_value": "NaN",
+            "filters": null,
+            "order": "C",
+            "shape": [
+                12,
+                6
+            ],
+            "zarr_format": 2
+        },
+        "river_volume/.zattrs": {
+            "_ARRAY_DIMENSIONS": [
+                "river_time",
+                "nriver"
+            ],
+            "coordinates": "abs_time month river_name",
+            "long_name": "River volume flux",
+            "units": "m^3/s"
+        },
+        "tracer_name/.zarray": {
+            "chunks": [
+                2
+            ],
+            "compressor": {
+                "blocksize": 0,
+                "clevel": 5,
+                "cname": "lz4",
+                "id": "blosc",
+                "shuffle": 1
+            },
+            "dtype": "<U11",
+            "fill_value": null,
+            "filters": null,
+            "order": "C",
+            "shape": [
+                2
+            ],
+            "zarr_format": 2
+        },
+        "tracer_name/.zattrs": {
+            "_ARRAY_DIMENSIONS": [
+                "ntracers"
+            ],
+            "long_name": "Tracer name"
+        }
+    },
+    "zarr_consolidated_format": 1
+}

roms_tools/tests/test_setup/test_data/river_forcing.zarr/abs_time/.zarray

@@ -0,0 +1,20 @@
+{
+    "chunks": [
+        12
+    ],
+    "compressor": {
+        "blocksize": 0,
+        "clevel": 5,
+        "cname": "lz4",
+        "id": "blosc",
+        "shuffle": 1
+    },
+    "dtype": "<i8",
+    "fill_value": null,
+    "filters": null,
+    "order": "C",
+    "shape": [
+        12
+    ],
+    "zarr_format": 2
+}

roms_tools/tests/test_setup/test_data/river_forcing.zarr/abs_time/.zattrs

@@ -0,0 +1,8 @@
+{
+    "_ARRAY_DIMENSIONS": [
+        "river_time"
+    ],
+    "calendar": "proleptic_gregorian",
+    "long_name": "absolute time",
+    "units": "days since 2000-01-16 00:00:00"
+}