roms-tools 1.4.2__py3-none-any.whl → 1.6.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (278) hide show
  1. roms_tools/_version.py +1 -1
  2. roms_tools/setup/boundary_forcing.py +448 -130
  3. roms_tools/setup/datasets.py +186 -52
  4. roms_tools/setup/fill.py +2 -2
  5. roms_tools/setup/initial_conditions.py +217 -70
  6. roms_tools/setup/regrid.py +143 -0
  7. roms_tools/setup/surface_forcing.py +159 -73
  8. roms_tools/setup/tides.py +141 -54
  9. roms_tools/setup/utils.py +229 -62
  10. roms_tools/tests/test_setup/test_boundary_forcing.py +42 -32
  11. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/.zattrs +1 -1
  12. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/.zmetadata +1 -1
  13. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_east/0.0.0 +0 -0
  14. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_north/0.0.0 +0 -0
  15. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_south/0.0.0 +0 -0
  16. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_west/0.0.0 +0 -0
  17. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_east/0.0.0 +0 -0
  18. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_north/0.0.0 +0 -0
  19. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_south/0.0.0 +0 -0
  20. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_west/0.0.0 +0 -0
  21. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_east/0.0.0 +0 -0
  22. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_north/0.0.0 +0 -0
  23. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_south/0.0.0 +0 -0
  24. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_west/0.0.0 +0 -0
  25. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_east/0.0.0 +0 -0
  26. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_north/0.0.0 +0 -0
  27. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_south/0.0.0 +0 -0
  28. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_west/0.0.0 +0 -0
  29. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_east/0.0.0 +0 -0
  30. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_north/0.0.0 +0 -0
  31. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_south/0.0.0 +0 -0
  32. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_west/0.0.0 +0 -0
  33. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_east/0.0.0 +0 -0
  34. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_north/0.0.0 +0 -0
  35. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_south/0.0.0 +0 -0
  36. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_west/0.0.0 +0 -0
  37. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_east/0.0.0 +0 -0
  38. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_north/0.0.0 +0 -0
  39. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_south/0.0.0 +0 -0
  40. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_west/0.0.0 +0 -0
  41. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_east/0.0.0 +0 -0
  42. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_north/0.0.0 +0 -0
  43. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_south/0.0.0 +0 -0
  44. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_west/0.0.0 +0 -0
  45. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_east/0.0.0 +0 -0
  46. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_north/0.0.0 +0 -0
  47. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_south/0.0.0 +0 -0
  48. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_west/0.0.0 +0 -0
  49. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_east/0.0.0 +0 -0
  50. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_north/0.0.0 +0 -0
  51. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_south/0.0.0 +0 -0
  52. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_west/0.0.0 +0 -0
  53. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Fe_east/0.0.0 +0 -0
  54. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Fe_north/0.0.0 +0 -0
  55. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Fe_south/0.0.0 +0 -0
  56. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Fe_west/0.0.0 +0 -0
  57. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_east/0.0.0 +0 -0
  58. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_north/0.0.0 +0 -0
  59. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_south/0.0.0 +0 -0
  60. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_west/0.0.0 +0 -0
  61. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NH4_east/0.0.0 +0 -0
  62. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NH4_north/0.0.0 +0 -0
  63. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NH4_south/0.0.0 +0 -0
  64. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NH4_west/0.0.0 +0 -0
  65. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NO3_east/0.0.0 +0 -0
  66. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NO3_north/0.0.0 +0 -0
  67. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NO3_south/0.0.0 +0 -0
  68. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NO3_west/0.0.0 +0 -0
  69. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/O2_east/0.0.0 +0 -0
  70. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/O2_north/0.0.0 +0 -0
  71. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/O2_south/0.0.0 +0 -0
  72. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/O2_west/0.0.0 +0 -0
  73. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/PO4_east/0.0.0 +0 -0
  74. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/PO4_north/0.0.0 +0 -0
  75. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/PO4_south/0.0.0 +0 -0
  76. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/PO4_west/0.0.0 +0 -0
  77. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/SiO3_east/0.0.0 +0 -0
  78. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/SiO3_north/0.0.0 +0 -0
  79. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/SiO3_south/0.0.0 +0 -0
  80. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/SiO3_west/0.0.0 +0 -0
  81. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatC_east/0.0.0 +0 -0
  82. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatC_north/0.0.0 +0 -0
  83. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatC_south/0.0.0 +0 -0
  84. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatC_west/0.0.0 +0 -0
  85. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatChl_east/0.0.0 +0 -0
  86. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatChl_north/0.0.0 +0 -0
  87. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatChl_south/0.0.0 +0 -0
  88. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatChl_west/0.0.0 +0 -0
  89. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatFe_east/0.0.0 +0 -0
  90. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatFe_north/0.0.0 +0 -0
  91. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatFe_south/0.0.0 +0 -0
  92. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatFe_west/0.0.0 +0 -0
  93. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatP_east/0.0.0 +0 -0
  94. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatP_north/0.0.0 +0 -0
  95. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatP_south/0.0.0 +0 -0
  96. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatP_west/0.0.0 +0 -0
  97. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatSi_east/0.0.0 +0 -0
  98. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatSi_north/0.0.0 +0 -0
  99. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatSi_south/0.0.0 +0 -0
  100. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diatSi_west/0.0.0 +0 -0
  101. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazC_east/0.0.0 +0 -0
  102. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazC_north/0.0.0 +0 -0
  103. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazC_south/0.0.0 +0 -0
  104. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazC_west/0.0.0 +0 -0
  105. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazChl_east/0.0.0 +0 -0
  106. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazChl_north/0.0.0 +0 -0
  107. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazChl_south/0.0.0 +0 -0
  108. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazChl_west/0.0.0 +0 -0
  109. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazFe_east/0.0.0 +0 -0
  110. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazFe_north/0.0.0 +0 -0
  111. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazFe_south/0.0.0 +0 -0
  112. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazFe_west/0.0.0 +0 -0
  113. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazP_east/0.0.0 +0 -0
  114. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazP_north/0.0.0 +0 -0
  115. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazP_south/0.0.0 +0 -0
  116. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/diazP_west/0.0.0 +0 -0
  117. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spC_east/0.0.0 +0 -0
  118. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spC_north/0.0.0 +0 -0
  119. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spC_south/0.0.0 +0 -0
  120. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spC_west/0.0.0 +0 -0
  121. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spCaCO3_east/0.0.0 +0 -0
  122. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spCaCO3_north/0.0.0 +0 -0
  123. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spCaCO3_south/0.0.0 +0 -0
  124. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spCaCO3_west/0.0.0 +0 -0
  125. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spChl_east/0.0.0 +0 -0
  126. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spChl_north/0.0.0 +0 -0
  127. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spChl_south/0.0.0 +0 -0
  128. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spChl_west/0.0.0 +0 -0
  129. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/spFe_east/0.0.0 +0 -0
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  142. roms_tools/tests/test_setup/test_data/bgc_surface_forcing.zarr/.zmetadata +1 -1
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  155. roms_tools/tests/test_setup/test_data/bgc_surface_forcing_from_climatology.zarr/pco2_air/0.0.0 +0 -0
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roms_tools/tests/test_setup/test_data/corrected_surface_forcing.zarr/.zattrs CHANGED
@@ -2,7 +2,7 @@
2
2
  "correct_radiation": "True",
3
3
  "end_time": "2020-02-02 00:00:00",
4
4
  "model_reference_date": "2000-01-01 00:00:00",
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- "roms_tools_version": "0.1.dev152+dirty",
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+ "roms_tools_version": "0.1.dev157+dirty",
6
6
  "source": "ERA5",
7
7
  "start_time": "2020-01-31 00:00:00",
8
8
  "title": "ROMS surface forcing file created by ROMS-Tools",
roms_tools/tests/test_setup/test_data/corrected_surface_forcing.zarr/.zmetadata CHANGED
@@ -4,7 +4,7 @@
4
4
  "correct_radiation": "True",
5
5
  "end_time": "2020-02-02 00:00:00",
6
6
  "model_reference_date": "2000-01-01 00:00:00",
7
- "roms_tools_version": "0.1.dev152+dirty",
7
+ "roms_tools_version": "0.1.dev157+dirty",
8
8
  "source": "ERA5",
9
9
  "start_time": "2020-01-31 00:00:00",
10
10
  "title": "ROMS surface forcing file created by ROMS-Tools",
roms_tools/tests/test_setup/test_data/initial_conditions_with_bgc_from_climatology.zarr/.zattrs CHANGED
@@ -3,7 +3,7 @@
3
3
  "hc": 250.0,
4
4
  "ini_time": "2021-06-29 00:00:00",
5
5
  "model_reference_date": "2000-01-01 00:00:00",
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- "roms_tools_version": "0.1.dev152+dirty",
6
+ "roms_tools_version": "0.1.dev157+dirty",
7
7
  "source": "GLORYS",
8
8
  "theta_b": 2.0,
9
9
  "theta_s": 5.0,
roms_tools/tests/test_setup/test_data/initial_conditions_with_bgc_from_climatology.zarr/.zmetadata CHANGED
@@ -5,7 +5,7 @@
5
5
  "hc": 250.0,
6
6
  "ini_time": "2021-06-29 00:00:00",
7
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  "model_reference_date": "2000-01-01 00:00:00",
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- "roms_tools_version": "0.1.dev152+dirty",
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  "source": "GLORYS",
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10
  "theta_b": 2.0,
11
11
  "theta_s": 5.0,