roms-tools 1.4.1__py3-none-any.whl → 1.4.2__py3-none-any.whl

roms_tools/tests/test_setup/test_tides.py

@@ -25,9 +25,7 @@ def grid_that_is_out_of_bounds_of_regional_tpxo_data():
 
 @pytest.fixture
 def grid_that_straddles_dateline():
-    """
-    Fixture for creating a domain that straddles the dateline.
-    """
+    """Fixture for creating a domain that straddles the dateline."""
     grid = Grid(
         nx=5,
         ny=5,
@@ -43,9 +41,7 @@ def grid_that_straddles_dateline():
 
 @pytest.fixture
 def grid_that_straddles_180_degree_meridian():
-    """
-    Fixture for creating a domain that straddles 180 degree meridian.
-    """
+    """Fixture for creating a domain that straddles 180 degree meridian."""
 
     grid = Grid(
         nx=5,
@@ -174,9 +170,8 @@ def test_insufficient_number_of_consituents(grid_that_straddles_dateline, use_da
 
 
 def test_tidal_forcing_plot_save(tidal_forcing, tmp_path):
-    """
-    Test plot and save methods in the same test since we dask arrays are already computed.
-    """
+    """Test plot and save methods in the same test since we dask arrays are already
+    computed."""
     tidal_forcing.ds.load()
 
     tidal_forcing.plot(varname="ssh_Re", ntides=0)
@@ -211,7 +206,8 @@ def test_tidal_forcing_plot_save(tidal_forcing, tmp_path):
 
 
 def test_roundtrip_yaml(tidal_forcing, tmp_path, use_dask):
-    """Test that creating a TidalForcing object, saving its parameters to yaml file, and re-opening yaml file creates the same object."""
+    """Test that creating a TidalForcing object, saving its parameters to yaml file, and
+    re-opening yaml file creates the same object."""
 
     # Create a temporary filepath using the tmp_path fixture
     file_str = "test_yaml"

roms_tools/tests/test_setup/test_topography.py

@@ -59,10 +59,8 @@ def test_hmin_criterion():
 
 
 def test_mask_topography_boundary():
-    """
-    Test that the mask and topography along the grid boundaries (north, south, east, west)
-    are identical to the adjacent inland cells.
-    """
+    """Test that the mask and topography along the grid boundaries (north, south, east,
+    west) are identical to the adjacent inland cells."""
 
     # Create a grid with some land along the northern boundary
     grid = Grid(

roms_tools/tests/test_setup/test_vertical_coordinate.py

@@ -3,9 +3,7 @@ from roms_tools import Grid
 
 
 def test_invalid_theta_s_value():
-    """
-    Test the validation of the theta_s value.
-    """
+    """Test the validation of the theta_s value."""
     with pytest.raises(ValueError):
 
         Grid(
@@ -24,9 +22,7 @@ def test_invalid_theta_s_value():
 
 
 def test_invalid_theta_b_value():
-    """
-    Test the validation of the theta_b value.
-    """
+    """Test the validation of the theta_b value."""
     with pytest.raises(ValueError):
         Grid(
             nx=2,

roms_tools/tests/test_utils.py

@@ -23,8 +23,8 @@ class TestPartitionGrid:
             "xi_rho": 32,
             "xi_u": 31,
             "eta_v": 10,
-            "eta_psi": 11,
-            "xi_psi": 33,
+            # "eta_psi": 11,
+            # "xi_psi": 33,
             "eta_coarse": 6,
             "xi_coarse": 17,
             "s_rho": 100,
@@ -35,8 +35,8 @@ class TestPartitionGrid:
             "xi_rho": 32,
             "xi_u": 31,
             "eta_v": 10,
-            "eta_psi": 10,
-            "xi_psi": 33,
+            # "eta_psi": 10,
+            # "xi_psi": 33,
             "eta_coarse": 5,
             "xi_coarse": 17,
             "s_rho": 100,
@@ -47,8 +47,8 @@ class TestPartitionGrid:
             "xi_rho": 32,
             "xi_u": 31,
             "eta_v": 11,
-            "eta_psi": 12,
-            "xi_psi": 33,
+            # "eta_psi": 12,
+            # "xi_psi": 33,
             "eta_coarse": 6,
             "xi_coarse": 17,
             "s_rho": 100,
@@ -63,8 +63,8 @@ class TestPartitionGrid:
             "xi_rho": 11,
             "xi_u": 10,
             "eta_v": 31,
-            "eta_psi": 33,
-            "xi_psi": 11,
+            # "eta_psi": 33,
+            # "xi_psi": 11,
             "eta_coarse": 17,
             "xi_coarse": 6,
             "s_rho": 100,
@@ -75,8 +75,8 @@ class TestPartitionGrid:
             "xi_rho": 10,
             "xi_u": 10,
             "eta_v": 31,
-            "eta_psi": 33,
-            "xi_psi": 10,
+            # "eta_psi": 33,
+            # "xi_psi": 10,
             "eta_coarse": 17,
             "xi_coarse": 5,
             "s_rho": 100,
@@ -87,8 +87,8 @@ class TestPartitionGrid:
             "xi_rho": 11,
             "xi_u": 11,
             "eta_v": 31,
-            "eta_psi": 33,
-            "xi_psi": 12,
+            # "eta_psi": 33,
+            # "xi_psi": 12,
             "eta_coarse": 17,
             "xi_coarse": 6,
             "s_rho": 100,
@@ -108,8 +108,8 @@ class TestPartitionGrid:
             "xi_rho": 11,
             "xi_u": 10,
             "eta_v": 10,
-            "eta_psi": 11,
-            "xi_psi": 11,
+            # "eta_psi": 11,
+            # "xi_psi": 11,
             "eta_coarse": 6,
             "xi_coarse": 6,
             "s_rho": 100,
@@ -121,8 +121,8 @@ class TestPartitionGrid:
             "xi_u": 10,
             "eta_v": 10,
             "eta_coarse": 5,
-            "eta_psi": 10,
-            "xi_psi": 11,
+            # "eta_psi": 10,
+            # "xi_psi": 11,
             "xi_coarse": 6,
             "s_rho": 100,
             "s_w": 101,
@@ -132,8 +132,8 @@ class TestPartitionGrid:
             "xi_rho": 11,
             "xi_u": 10,
             "eta_v": 11,
-            "eta_psi": 12,
-            "xi_psi": 11,
+            # "eta_psi": 12,
+            # "xi_psi": 11,
             "eta_coarse": 6,
             "xi_coarse": 6,
             "s_rho": 100,
@@ -144,8 +144,8 @@ class TestPartitionGrid:
             "xi_rho": 10,
             "xi_u": 10,
             "eta_v": 10,
-            "eta_psi": 11,
-            "xi_psi": 10,
+            # "eta_psi": 11,
+            # "xi_psi": 10,
             "eta_coarse": 6,
             "xi_coarse": 5,
             "s_rho": 100,
@@ -156,8 +156,8 @@ class TestPartitionGrid:
             "xi_rho": 10,
             "xi_u": 10,
             "eta_v": 10,
-            "eta_psi": 10,
-            "xi_psi": 10,
+            # "eta_psi": 10,
+            # "xi_psi": 10,
             "eta_coarse": 5,
             "xi_coarse": 5,
             "s_rho": 100,
@@ -168,8 +168,8 @@ class TestPartitionGrid:
             "xi_rho": 10,
             "xi_u": 10,
             "eta_v": 11,
-            "eta_psi": 12,
-            "xi_psi": 10,
+            # "eta_psi": 12,
+            # "xi_psi": 10,
             "eta_coarse": 6,
             "xi_coarse": 5,
             "s_rho": 100,
@@ -180,8 +180,8 @@ class TestPartitionGrid:
             "xi_rho": 11,
             "xi_u": 11,
             "eta_v": 10,
-            "eta_psi": 11,
-            "xi_psi": 12,
+            # "eta_psi": 11,
+            # "xi_psi": 12,
             "eta_coarse": 6,
             "xi_coarse": 6,
             "s_rho": 100,
@@ -192,8 +192,8 @@ class TestPartitionGrid:
             "xi_rho": 11,
             "xi_u": 11,
             "eta_v": 10,
-            "eta_psi": 10,
-            "xi_psi": 12,
+            # "eta_psi": 10,
+            # "xi_psi": 12,
             "eta_coarse": 5,
             "xi_coarse": 6,
             "s_rho": 100,
@@ -204,8 +204,8 @@ class TestPartitionGrid:
             "xi_rho": 11,
             "xi_u": 11,
             "eta_v": 11,
-            "eta_psi": 12,
-            "xi_psi": 12,
+            # "eta_psi": 12,
+            # "xi_psi": 12,
             "eta_coarse": 6,
             "xi_coarse": 6,
             "s_rho": 100,

roms_tools/utils.py

@@ -9,8 +9,8 @@ from pathlib import Path
 def partition(
     ds: xr.Dataset, np_eta: int = 1, np_xi: int = 1
 ) -> tuple[list[int], list[xr.Dataset]]:
-    """
-    Partition a ROMS (Regional Ocean Modeling System) dataset into smaller spatial tiles.
+    """Partition a ROMS (Regional Ocean Modeling System) dataset into smaller spatial
+    tiles.
 
     This function divides the input dataset into `np_eta` by `np_xi` tiles, where each tile
     represents a subdomain of the original dataset. The partitioning is performed along
@@ -32,6 +32,7 @@ def partition(
     -------
     tuple[list[int], list[xr.Dataset]]
         A tuple containing two elements:
+
         - A list of integers representing the file numbers associated with each partition.
         - A list of `xarray.Dataset` objects, each representing a partitioned subdomain of the original dataset.
 
@@ -90,8 +91,7 @@ def partition(
         n_xi_ghost_cells = 1
 
     def integer_division_or_raise(a: int, b: int, dimension: str) -> int:
-        """
-        Perform integer division and ensure that the division is exact.
+        """Perform integer division and ensure that the division is exact.
 
         Parameters
         ----------
@@ -214,7 +214,7 @@ def partition(
             )
 
     def cumsum(pmf):
-        """Implementation of cumsum which ensures the result starts with zero"""
+        """Implementation of cumsum which ensures the result starts with zero."""
         cdf = np.empty(len(pmf) + 1, dtype=int)
         cdf[0] = 0
         np.cumsum(pmf, out=cdf[1:])
@@ -290,8 +290,7 @@ def partition(
 def partition_netcdf(
     filepath: Union[str, Path], np_eta: int = 1, np_xi: int = 1
 ) -> None:
-    """
-    Partition a ROMS NetCDF file into smaller spatial tiles and save them to disk.
+    """Partition a ROMS NetCDF file into smaller spatial tiles and save them to disk.
 
     This function divides the dataset in the specified NetCDF file into `np_eta` by `np_xi` tiles.
     Each tile is saved as a separate NetCDF file.

{roms_tools-1.4.1.dist-info → roms_tools-1.4.2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: roms-tools
-Version: 1.4.1
+Version: 1.4.2
 Summary: Tools for running and analysing UCLA-ROMS simulations
 Author-email: Nora Loose <nora.loose@gmail.com>, Thomas Nicholas <tom@cworthy.org>
 License: Apache-2

{roms_tools-1.4.1.dist-info → roms_tools-1.4.2.dist-info}/RECORD

@@ -1,35 +1,35 @@
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@@ -654,9 +654,9 @@ roms_tools/tests/test_setup/test_data/corrected_surface_forcing.zarr/uwnd/0.0.0,
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@@ -687,9 +687,6 @@ roms_tools/tests/test_setup/test_data/grid.zarr/interface_depth_v/0.0.0,sha256=S
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 roms_tools/tests/test_setup/test_data/grid.zarr/lat_rho/.zarray,sha256=T4pLEz8STkOu6ye11Nr3UAEqq-F5FKxaNmP18HvdNzg,335
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@@ -711,9 +708,6 @@ roms_tools/tests/test_setup/test_data/grid.zarr/layer_depth_v/0.0.0,sha256=B1Wjw
 roms_tools/tests/test_setup/test_data/grid.zarr/lon_coarse/.zarray,sha256=xkMMk-P63y2bFi7nW9AXUINxSsKxvw9zL6F1FFn6uKg,335
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 roms_tools/tests/test_setup/test_data/grid.zarr/lon_coarse/0.0,sha256=F6lD_xb7bWSJVKBDFEqx7n_2QjOG0H4qZ6-IbLsBHfY,48
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-roms_tools/tests/test_setup/test_data/grid.zarr/lon_psi/.zattrs,sha256=p3MpQWfd8tJsDDL-HlrfYbFXzGX5Fyi3Re_8uRLmOoc,145
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 roms_tools/tests/test_setup/test_data/grid.zarr/lon_rho/.zarray,sha256=T4pLEz8STkOu6ye11Nr3UAEqq-F5FKxaNmP18HvdNzg,335
 roms_tools/tests/test_setup/test_data/grid.zarr/lon_rho/.zattrs,sha256=5YJxqPL9Pka78Xgsx7vHChvP-_fqFREL0RjA5Rd4S38,145
 roms_tools/tests/test_setup/test_data/grid.zarr/lon_rho/0.0,sha256=95oPMErcvH1PQLhhwridJ9DJVOjoK9tGkIolCj3f6pk,88
@@ -744,9 +738,9 @@ roms_tools/tests/test_setup/test_data/grid.zarr/pn/0.0,sha256=BnhMxLyvN_ouYQnROp
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 roms_tools/tests/test_setup/test_data/grid.zarr/spherical/.zattrs,sha256=L66B4q9PeEaoZuuWuK9Z9NxjAVg2i3jPiDx9GnJ9xxI,105
 roms_tools/tests/test_setup/test_data/grid.zarr/spherical/0,sha256=5jK3CVsL8ywmD6TFOen9e4UtDeRU6b4m8k0Nb5HQadM,1
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 roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/Cs_r/.zarray,sha256=AKux-aoyF5C9GFR3vyl8eWDkhniDbAS9YLDvWsMzVQw,317
 roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/Cs_r/.zattrs,sha256=fX6eFzkzc54iLCsEEPRVTtUY7RelzkT9IbDAyLFz2uk,148
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@@ -777,9 +771,6 @@ roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/interfac
 roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/lat_coarse/.zarray,sha256=xkMMk-P63y2bFi7nW9AXUINxSsKxvw9zL6F1FFn6uKg,335
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@@ -801,9 +792,6 @@ roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/layer_de
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roms_tools/tests/test_setup/test_data/grid.zarr/lat_psi/.zarray

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-{
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roms_tools/tests/test_setup/test_data/grid.zarr/lat_psi/.zattrs

@@ -1,8 +0,0 @@
-{
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-        "eta_psi",
-        "xi_psi"
-    ],
-    "long_name": "latitude of psi-points",
-    "units": "degrees North"
-}

roms_tools/tests/test_setup/test_data/grid.zarr/lon_psi/.zarray

@@ -1,22 +0,0 @@
-{
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roms_tools/tests/test_setup/test_data/grid.zarr/lon_psi/.zattrs

@@ -1,8 +0,0 @@
-{
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-        "xi_psi"
-    ],
-    "long_name": "longitude of psi-points",
-    "units": "degrees East"
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roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/lat_psi/.zarray

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-{
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roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/lat_psi/.zattrs

@@ -1,8 +0,0 @@
-{
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-    "long_name": "latitude of psi-points",
-    "units": "degrees North"
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roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/lon_psi/.zarray

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-{
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roms_tools/tests/test_setup/test_data/grid_that_straddles_dateline.zarr/lon_psi/.zattrs

@@ -1,8 +0,0 @@
-{
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-        "xi_psi"
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-    "long_name": "longitude of psi-points",
-    "units": "degrees East"
-}