roms-tools 1.2.0__py3-none-any.whl → 1.4.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1029) hide show
  1. ci/environment.yml +3 -12
  2. roms_tools/_version.py +1 -1
  3. roms_tools/setup/boundary_forcing.py +172 -223
  4. roms_tools/setup/datasets.py +397 -160
  5. roms_tools/setup/download.py +8 -0
  6. roms_tools/setup/fill.py +266 -331
  7. roms_tools/setup/grid.py +113 -22
  8. roms_tools/setup/initial_conditions.py +105 -55
  9. roms_tools/setup/mixins.py +29 -194
  10. roms_tools/setup/plot.py +8 -1
  11. roms_tools/setup/surface_forcing.py +219 -261
  12. roms_tools/setup/tides.py +116 -62
  13. roms_tools/setup/topography.py +5 -3
  14. roms_tools/setup/utils.py +437 -21
  15. roms_tools/tests/__init__.py +0 -0
  16. roms_tools/tests/test_setup/__init__.py +0 -0
  17. roms_tools/tests/test_setup/test_boundary_forcing.py +294 -0
  18. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/.zattrs +12 -0
  19. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/.zgroup +3 -0
  20. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/.zmetadata +4427 -0
  21. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_east/.zarray +24 -0
  22. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_east/.zattrs +10 -0
  23. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_east/0.0.0 +0 -0
  24. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_north/.zarray +24 -0
  25. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_north/.zattrs +10 -0
  26. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_north/0.0.0 +0 -0
  27. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_south/.zarray +24 -0
  28. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_south/.zattrs +10 -0
  29. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_south/0.0.0 +0 -0
  30. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_west/.zarray +24 -0
  31. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_west/.zattrs +10 -0
  32. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_ALT_CO2_west/0.0.0 +0 -0
  33. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_east/.zarray +24 -0
  34. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_east/.zattrs +10 -0
  35. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_east/0.0.0 +0 -0
  36. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_north/.zarray +24 -0
  37. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_north/.zattrs +10 -0
  38. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_north/0.0.0 +0 -0
  39. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_south/.zarray +24 -0
  40. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_south/.zattrs +10 -0
  41. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_south/0.0.0 +0 -0
  42. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_west/.zarray +24 -0
  43. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_west/.zattrs +10 -0
  44. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/ALK_west/0.0.0 +0 -0
  45. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_east/.zarray +24 -0
  46. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_east/.zattrs +10 -0
  47. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_east/0.0.0 +0 -0
  48. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_north/.zarray +24 -0
  49. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_north/.zattrs +10 -0
  50. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_north/0.0.0 +0 -0
  51. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_south/.zarray +24 -0
  52. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_south/.zattrs +10 -0
  53. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_south/0.0.0 +0 -0
  54. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_west/.zarray +24 -0
  55. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_west/.zattrs +10 -0
  56. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_ALT_CO2_west/0.0.0 +0 -0
  57. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_east/.zarray +24 -0
  58. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_east/.zattrs +10 -0
  59. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_east/0.0.0 +0 -0
  60. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_north/.zarray +24 -0
  61. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_north/.zattrs +10 -0
  62. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_north/0.0.0 +0 -0
  63. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_south/.zarray +24 -0
  64. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_south/.zattrs +10 -0
  65. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_south/0.0.0 +0 -0
  66. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_west/.zarray +24 -0
  67. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_west/.zattrs +10 -0
  68. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DIC_west/0.0.0 +0 -0
  69. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_east/.zarray +24 -0
  70. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_east/.zattrs +10 -0
  71. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_east/0.0.0 +0 -0
  72. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_north/.zarray +24 -0
  73. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_north/.zattrs +10 -0
  74. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_north/0.0.0 +0 -0
  75. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_south/.zarray +24 -0
  76. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_south/.zattrs +10 -0
  77. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_south/0.0.0 +0 -0
  78. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_west/.zarray +24 -0
  79. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_west/.zattrs +10 -0
  80. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOC_west/0.0.0 +0 -0
  81. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_east/.zarray +24 -0
  82. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_east/.zattrs +10 -0
  83. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_east/0.0.0 +0 -0
  84. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_north/.zarray +24 -0
  85. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_north/.zattrs +10 -0
  86. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_north/0.0.0 +0 -0
  87. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_south/.zarray +24 -0
  88. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_south/.zattrs +10 -0
  89. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_south/0.0.0 +0 -0
  90. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_west/.zarray +24 -0
  91. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_west/.zattrs +10 -0
  92. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOCr_west/0.0.0 +0 -0
  93. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_east/.zarray +24 -0
  94. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_east/.zattrs +10 -0
  95. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_east/0.0.0 +0 -0
  96. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_north/.zarray +24 -0
  97. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_north/.zattrs +10 -0
  98. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_north/0.0.0 +0 -0
  99. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_south/.zarray +24 -0
  100. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_south/.zattrs +10 -0
  101. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_south/0.0.0 +0 -0
  102. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_west/.zarray +24 -0
  103. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_west/.zattrs +10 -0
  104. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DON_west/0.0.0 +0 -0
  105. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_east/.zarray +24 -0
  106. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_east/.zattrs +10 -0
  107. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_east/0.0.0 +0 -0
  108. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_north/.zarray +24 -0
  109. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_north/.zattrs +10 -0
  110. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_north/0.0.0 +0 -0
  111. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_south/.zarray +24 -0
  112. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_south/.zattrs +10 -0
  113. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_south/0.0.0 +0 -0
  114. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_west/.zarray +24 -0
  115. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_west/.zattrs +10 -0
  116. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DONr_west/0.0.0 +0 -0
  117. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_east/.zarray +24 -0
  118. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_east/.zattrs +10 -0
  119. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_east/0.0.0 +0 -0
  120. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_north/.zarray +24 -0
  121. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_north/.zattrs +10 -0
  122. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_north/0.0.0 +0 -0
  123. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_south/.zarray +24 -0
  124. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_south/.zattrs +10 -0
  125. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_south/0.0.0 +0 -0
  126. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_west/.zarray +24 -0
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  128. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOP_west/0.0.0 +0 -0
  129. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_east/.zarray +24 -0
  130. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_east/.zattrs +10 -0
  131. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_east/0.0.0 +0 -0
  132. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_north/.zarray +24 -0
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  135. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_south/.zarray +24 -0
  136. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_south/.zattrs +10 -0
  137. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_south/0.0.0 +0 -0
  138. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_west/.zarray +24 -0
  139. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/DOPr_west/.zattrs +10 -0
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  141. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Fe_east/.zarray +24 -0
  142. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Fe_east/.zattrs +10 -0
  143. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Fe_east/0.0.0 +0 -0
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  147. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Fe_south/.zarray +24 -0
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  153. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_east/.zarray +24 -0
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  159. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_south/.zarray +24 -0
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  161. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_south/0.0.0 +0 -0
  162. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_west/.zarray +24 -0
  163. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_west/.zattrs +10 -0
  164. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/Lig_west/0.0.0 +0 -0
  165. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NH4_east/.zarray +24 -0
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  168. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NH4_north/.zarray +24 -0
  169. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NH4_north/.zattrs +10 -0
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  171. roms_tools/tests/test_setup/test_data/bgc_boundary_forcing_from_climatology.zarr/NH4_south/.zarray +24 -0
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