roifile 2024.9.15__py3-none-any.whl → 2025.5.10__py3-none-any.whl

roifile/__init__.py

@@ -1,4 +1,17 @@
 # roifile/__init__.py
 
-from .roifile import __doc__, __all__, __version__
 from .roifile import *
+from .roifile import __all__, __doc__, __version__
+
+
+def _set_module() -> None:
+    """Set __module__ attribute for all public objects."""
+    globs = globals()
+    module = globs['__name__']
+    for item in __all__:
+        obj = globs[item]
+        if hasattr(obj, '__module__'):
+            obj.__module__ = module
+
+
+_set_module()

roifile/roifile.py

@@ -1,6 +1,6 @@
 # roifile.py
 
-# Copyright (c) 2020-2024, Christoph Gohlke
+# Copyright (c) 2020-2025, Christoph Gohlke
 # All rights reserved.
 #
 # Redistribution and use in source and binary forms, with or without
@@ -38,8 +38,8 @@ interest, geometric shapes, paths, text, and whatnot for image overlays.
 .. _ImageJ: https://imagej.net
 
 :Author: `Christoph Gohlke <https://www.cgohlke.com>`_
-:License: BSD 3-Clause
-:Version: 2024.9.15
+:License: BSD-3-Clause
+:Version: 2025.5.10
 :DOI: `10.5281/zenodo.6941603 <https://doi.org/10.5281/zenodo.6941603>`_
 
 Quickstart
@@ -65,14 +65,22 @@ Requirements
 This revision was tested with the following requirements and dependencies
 (other versions may work):
 
-- `CPython <https://www.python.org>`_ 3.10.11, 3.11.9, 3.12.5, 3.13.0rc2
-- `Numpy <https://pypi.org/project/numpy/>`_ 2.2.1
-- `Tifffile <https://pypi.org/project/tifffile/>`_ 2024.8.30 (optional)
-- `Matplotlib <https://pypi.org/project/matplotlib/>`_ 3.9.2 (optional)
+- `CPython <https://www.python.org>`_ 3.10.11, 3.11.9, 3.12.10, 3.13.3 64-bit
+- `NumPy <https://pypi.org/project/numpy/>`_ 2.2.5
+- `Tifffile <https://pypi.org/project/tifffile/>`_ 2025.5.10 (optional)
+- `Matplotlib <https://pypi.org/project/matplotlib/>`_ 3.10.3 (optional)
 
 Revisions
 ---------
 
+2025.5.10
+
+- Support Python 3.14.
+
+2025.2.20
+
+- Drop support for Python 3.9.
+
 2024.9.15
 
 - Improve typing.
@@ -183,6 +191,7 @@ Read the ROIs from the ZIP file:
 
 Write the ROIs to an ImageJ formatted TIFF file:
 
+>>> import numpy
 >>> import tifffile
 >>> tifffile.imwrite(
 ...     '_test.tif',
@@ -206,9 +215,10 @@ For an advanced example, see `roifile_demo.py` in the source distribution.
 
 from __future__ import annotations
 
-__version__ = '2024.9.15'
+__version__ = '2025.5.10'
 
 __all__ = [
+    '__version__',
     'roiread',
     'roiwrite',
     'ImagejRoi',
@@ -232,8 +242,8 @@ from typing import TYPE_CHECKING
 import numpy
 
 if TYPE_CHECKING:
-    from collections.abc import Iterable
-    from typing import Any, Iterator, Literal
+    from collections.abc import Iterable, Iterator
+    from typing import Any, Literal
 
     from matplotlib.axes import Axes
     from numpy.typing import ArrayLike, NDArray
@@ -286,6 +296,7 @@ def roiwrite(
 
     import zipfile
 
+    assert mode is not None
     with zipfile.ZipFile(filename, mode) as zf:
         for r in roi:
             if name is None:
@@ -750,6 +761,7 @@ class ImagejRoi:
                 mode = 'a' if os.path.exists(filename) else 'w'
             import zipfile
 
+            assert mode is not None
             with zipfile.ZipFile(filename, mode) as zf:
                 with zf.open(name, 'w') as fh:
                     fh.write(self.tobytes())
@@ -1096,9 +1108,11 @@ class ImagejRoi:
         multi_coordinates: NDArray[numpy.float32], /
     ) -> list[NDArray[numpy.float32]]:
         """Return list of coordinate arrays from 2D geometric path."""
-        coordinates = []
+        coordinates: list[NDArray[numpy.float32]] = []
         points: list[list[float]] = []
-        path: list[float] = multi_coordinates.tolist()
+        path: list[float] = []
+
+        path = multi_coordinates.tolist()  # type: ignore[assignment]
         n = 0
         m = 0
         while n < len(path):
@@ -1302,8 +1316,8 @@ def enumstr(v: enum.Enum | None, /) -> str:
 
 
 def logger() -> logging.Logger:
-    """Return logging.getLogger('roifile')."""
-    return logging.getLogger(__name__.replace('roifile.roifile', 'roifile'))
+    """Return logger for roifile module."""
+    return logging.getLogger('roifile')
 
 
 def test(verbose: bool = False) -> None:

{roifile-2024.9.15.dist-info → roifile-2025.5.10.dist-info}/METADATA

@@ -1,16 +1,15 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.4
 Name: roifile
-Version: 2024.9.15
+Version: 2025.5.10
 Summary: Read and write ImageJ ROI format
 Home-page: https://www.cgohlke.com
 Author: Christoph Gohlke
 Author-email: cgohlke@cgohlke.com
-License: BSD
+License: BSD-3-Clause
 Project-URL: Bug Tracker, https://github.com/cgohlke/roifile/issues
 Project-URL: Source Code, https://github.com/cgohlke/roifile
 Platform: any
 Classifier: Development Status :: 4 - Beta
-Classifier: License :: OSI Approved :: BSD License
 Classifier: Intended Audience :: Science/Research
 Classifier: Intended Audience :: Developers
 Classifier: Operating System :: OS Independent
@@ -19,13 +18,28 @@ Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
 Classifier: Programming Language :: Python :: 3.13
-Requires-Python: >=3.9
+Classifier: Programming Language :: Python :: 3.14
+Requires-Python: >=3.10
 Description-Content-Type: text/x-rst
 License-File: LICENSE
 Requires-Dist: numpy
 Provides-Extra: all
 Requires-Dist: matplotlib; extra == "all"
 Requires-Dist: tifffile; extra == "all"
+Dynamic: author
+Dynamic: author-email
+Dynamic: classifier
+Dynamic: description
+Dynamic: description-content-type
+Dynamic: home-page
+Dynamic: license
+Dynamic: license-file
+Dynamic: platform
+Dynamic: project-url
+Dynamic: provides-extra
+Dynamic: requires-dist
+Dynamic: requires-python
+Dynamic: summary
 
 Read and write ImageJ ROI format
 ================================
@@ -37,8 +51,8 @@ interest, geometric shapes, paths, text, and whatnot for image overlays.
 .. _ImageJ: https://imagej.net
 
 :Author: `Christoph Gohlke <https://www.cgohlke.com>`_
-:License: BSD 3-Clause
-:Version: 2024.9.15
+:License: BSD-3-Clause
+:Version: 2025.5.10
 :DOI: `10.5281/zenodo.6941603 <https://doi.org/10.5281/zenodo.6941603>`_
 
 Quickstart
@@ -64,14 +78,22 @@ Requirements
 This revision was tested with the following requirements and dependencies
 (other versions may work):
 
-- `CPython <https://www.python.org>`_ 3.10.11, 3.11.9, 3.12.5, 3.13.0rc2
-- `Numpy <https://pypi.org/project/numpy/>`_ 2.2.1
-- `Tifffile <https://pypi.org/project/tifffile/>`_ 2024.8.30 (optional)
-- `Matplotlib <https://pypi.org/project/matplotlib/>`_ 3.9.2 (optional)
+- `CPython <https://www.python.org>`_ 3.10.11, 3.11.9, 3.12.10, 3.13.3 64-bit
+- `NumPy <https://pypi.org/project/numpy/>`_ 2.2.5
+- `Tifffile <https://pypi.org/project/tifffile/>`_ 2025.5.10 (optional)
+- `Matplotlib <https://pypi.org/project/matplotlib/>`_ 3.10.3 (optional)
 
 Revisions
 ---------
 
+2025.5.10
+
+- Support Python 3.14.
+
+2025.2.20
+
+- Drop support for Python 3.9.
+
 2024.9.15
 
 - Improve typing.
@@ -182,6 +204,7 @@ Read the ROIs from the ZIP file:
 
 Write the ROIs to an ImageJ formatted TIFF file:
 
+>>> import numpy
 >>> import tifffile
 >>> tifffile.imwrite(
 ...     '_test.tif',

roifile-2025.5.10.dist-info/RECORD

@@ -0,0 +1,10 @@
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+roifile/__main__.py,sha256=Mfn3wm-4cRRChIRonbEcZZT7eRX6RFlS31S8wS1JAVM,132
+roifile/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+roifile/roifile.py,sha256=DJ9wfD3mw6VscbMBeWQt-bcnp0Gi0X2NqZVQzPeBKIk,48713
+roifile-2025.5.10.dist-info/licenses/LICENSE,sha256=1yXweb-z6uE6JaIRMz2UpNOF-sYNbqTyHYhmRHWjyEI,1559
+roifile-2025.5.10.dist-info/METADATA,sha256=-e_Op2Q0FLIYk-fNnbZK8Xnw0W12iNUJFuenZnPNfvQ,5904
+roifile-2025.5.10.dist-info/WHEEL,sha256=0CuiUZ_p9E4cD6NyLD6UG80LBXYyiSYZOKDm5lp32xk,91
+roifile-2025.5.10.dist-info/entry_points.txt,sha256=xP8cwEUbAUeROLXNRanJnAIl13tagbjSSDGfVWf2vh0,49
+roifile-2025.5.10.dist-info/top_level.txt,sha256=QlfLomxPxuYNU0TTR7MXoVBAEAXCj2WJyKvoCJxNwek,8
+roifile-2025.5.10.dist-info/RECORD,,

{roifile-2024.9.15.dist-info → roifile-2025.5.10.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (74.1.2)
+Generator: setuptools (80.3.1)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

{roifile-2024.9.15.dist-info → roifile-2025.5.10.dist-info/licenses}/LICENSE

@@ -1,6 +1,6 @@
-BSD 3-Clause License
+BSD-3-Clause license
 
-Copyright (c) 2020-2024, Christoph Gohlke
+Copyright (c) 2020-2025, Christoph Gohlke
 All rights reserved.
 
 Redistribution and use in source and binary forms, with or without

roifile-2024.9.15.dist-info/RECORD

@@ -1,10 +0,0 @@
-roifile/__init__.py,sha256=leII9J_JWVpi0O9sAnG8s4SpcdwdqEeisFEFsnmN56c,101
-roifile/__main__.py,sha256=Mfn3wm-4cRRChIRonbEcZZT7eRX6RFlS31S8wS1JAVM,132
-roifile/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-roifile/roifile.py,sha256=4DEDDd_hzjhPdrByjDRBYOEzkcjVvg9X3urOOmvStYI,48478
-roifile-2024.9.15.dist-info/LICENSE,sha256=4bDcZTEFGF584Dw8M-07T5qfat7bsrfr8uuffsbFJYU,1559
-roifile-2024.9.15.dist-info/METADATA,sha256=_jKO-ffueSPxsvfJ-b2oTOAA99QgkgI8sTdGe_IMi88,5471
-roifile-2024.9.15.dist-info/WHEEL,sha256=cVxcB9AmuTcXqmwrtPhNK88dr7IR_b6qagTj0UvIEbY,91
-roifile-2024.9.15.dist-info/entry_points.txt,sha256=xP8cwEUbAUeROLXNRanJnAIl13tagbjSSDGfVWf2vh0,49
-roifile-2024.9.15.dist-info/top_level.txt,sha256=QlfLomxPxuYNU0TTR7MXoVBAEAXCj2WJyKvoCJxNwek,8
-roifile-2024.9.15.dist-info/RECORD,,