risk-network 0.0.13b4__py3-none-any.whl → 0.0.14b0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- risk/__init__.py +3 -2
- risk/_annotation/__init__.py +10 -0
- risk/{annotation/annotation.py → _annotation/_annotation.py} +18 -11
- risk/{annotation/io.py → _annotation/_io.py} +22 -14
- risk/{annotation/nltk_setup.py → _annotation/_nltk_setup.py} +7 -5
- risk/_log/__init__.py +11 -0
- risk/{log/console.py → _log/_console.py} +22 -12
- risk/{log/parameters.py → _log/_parameters.py} +25 -14
- risk/_neighborhoods/__init__.py +8 -0
- risk/{neighborhoods/api.py → _neighborhoods/_api.py} +23 -14
- risk/{neighborhoods/community.py → _neighborhoods/_community.py} +19 -11
- risk/{neighborhoods/domains.py → _neighborhoods/_domains.py} +15 -9
- risk/{neighborhoods/neighborhoods.py → _neighborhoods/_neighborhoods.py} +24 -35
- risk/_neighborhoods/_stats/__init__.py +13 -0
- risk/_neighborhoods/_stats/_permutation/__init__.py +6 -0
- risk/{neighborhoods/stats/permutation/permutation.py → _neighborhoods/_stats/_permutation/_permutation.py} +9 -6
- risk/{neighborhoods/stats/permutation/test_functions.py → _neighborhoods/_stats/_permutation/_test_functions.py} +6 -4
- risk/{neighborhoods/stats/tests.py → _neighborhoods/_stats/_tests.py} +12 -7
- risk/_network/__init__.py +8 -0
- risk/_network/_graph/__init__.py +7 -0
- risk/{network/graph/api.py → _network/_graph/_api.py} +13 -10
- risk/{network/graph/graph.py → _network/_graph/_graph.py} +24 -13
- risk/{network/graph/stats.py → _network/_graph/_stats.py} +8 -5
- risk/{network/graph/summary.py → _network/_graph/_summary.py} +21 -12
- risk/{network/io.py → _network/_io.py} +168 -126
- risk/_network/_plotter/__init__.py +6 -0
- risk/{network/plotter/api.py → _network/_plotter/_api.py} +9 -7
- risk/{network/plotter/canvas.py → _network/_plotter/_canvas.py} +14 -10
- risk/{network/plotter/contour.py → _network/_plotter/_contour.py} +17 -11
- risk/{network/plotter/labels.py → _network/_plotter/_labels.py} +38 -23
- risk/{network/plotter/network.py → _network/_plotter/_network.py} +17 -11
- risk/{network/plotter/plotter.py → _network/_plotter/_plotter.py} +19 -15
- risk/_network/_plotter/_utils/__init__.py +7 -0
- risk/{network/plotter/utils/colors.py → _network/_plotter/_utils/_colors.py} +19 -11
- risk/{network/plotter/utils/layout.py → _network/_plotter/_utils/_layout.py} +8 -5
- risk/{risk.py → _risk.py} +11 -11
- {risk_network-0.0.13b4.dist-info → risk_network-0.0.14b0.dist-info}/METADATA +1 -1
- risk_network-0.0.14b0.dist-info/RECORD +41 -0
- {risk_network-0.0.13b4.dist-info → risk_network-0.0.14b0.dist-info}/WHEEL +1 -1
- risk/annotation/__init__.py +0 -10
- risk/log/__init__.py +0 -11
- risk/neighborhoods/__init__.py +0 -7
- risk/neighborhoods/stats/__init__.py +0 -13
- risk/neighborhoods/stats/permutation/__init__.py +0 -6
- risk/network/__init__.py +0 -4
- risk/network/graph/__init__.py +0 -4
- risk/network/plotter/__init__.py +0 -4
- risk_network-0.0.13b4.dist-info/RECORD +0 -40
- {risk_network-0.0.13b4.dist-info → risk_network-0.0.14b0.dist-info}/licenses/LICENSE +0 -0
- {risk_network-0.0.13b4.dist-info → risk_network-0.0.14b0.dist-info}/top_level.txt +0 -0
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risk/__init__.py,sha256=4gUMRlMdNJ2feLptoxyeWymcTnqlyoExMrazTwzyfrs,143
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risk/_risk.py,sha256=VULCdM41BlWKM1ou4Qc579ffZ9dMZkfhAwKYgbaEeKM,1054
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risk/_annotation/__init__.py,sha256=zr7w1DHkmvrkKFGKdPhrcvZHV-xsfd5TZOaWtFiP4Dc,164
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risk/_annotation/_annotation.py,sha256=03vcnkdi4HGH5UUyokUyOdyyjXOLoKSmLFuK7VAl41c,15174
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risk/_annotation/_io.py,sha256=xic3dkEA54X82HbyWfCiXrUpAhPWFPBZ69R8jw31omQ,12457
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risk/_annotation/_nltk_setup.py,sha256=aHHnElLOKiouVDrZ3uON0CSFmBxvzmYfjYPi07v2rJM,3584
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risk/_log/__init__.py,sha256=LX6BsfcGOH0RbAdQaUmIU-LVMmArDdKwn0jFtj45FYo,205
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risk/_log/_console.py,sha256=1jSFzY3w0-vVqIBCgc-IhyJPNT6vRg8GSGxhyw_D9MI,4653
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risk/_log/_parameters.py,sha256=8FkeeBtULDFVw3UijLArK-G3OIjy6YXyRXmPPckK7fU,5893
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risk/_neighborhoods/__init__.py,sha256=eKwjpEUKSUmAirRZ_qPTVF7MLkvhCn_fulPVq158wM8,185
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risk/_neighborhoods/_api.py,sha256=6vt25y38wSvEhMvNxy9Rl-CrQc9ARSuvGwexWagg5z0,23344
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risk/_neighborhoods/_community.py,sha256=Tr-EHO91EWbMmNr_z21UCngiqWOlWIqcjwBig_VXI8c,17850
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risk/_neighborhoods/_domains.py,sha256=He8G2-E9-yYQB8ChUtMFr51HVlfRj5EaxGu3sGVNUCo,14630
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risk/_neighborhoods/_neighborhoods.py,sha256=9H7BickJx9GdnOo5d5wpdtXkcWyvzq2w6FAy1rwLBtk,20614
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risk/_neighborhoods/_stats/__init__.py,sha256=nL83A3unzpCTzRDPanCiqU1RsKPJJNDe46S9igoe3pg,264
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risk/_neighborhoods/_stats/_tests.py,sha256=-ioHdyrsgW63YnypKFpanatauuKrF3LT7aMZ3b6otrU,12091
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risk/_neighborhoods/_stats/_permutation/__init__.py,sha256=nfTaW29CK8OZCdFnpMVlHnFaqr1E4AZp6mvhlUazHXM,140
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risk/_neighborhoods/_stats/_permutation/_permutation.py,sha256=e5qVuYWGhiAn5Jv8VILk-WYMOO4km48cGdRYTOl355M,10661
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risk/_neighborhoods/_stats/_permutation/_test_functions.py,sha256=lGI_MkdbW4UHI0jWN_T1OattRjXrq_qmzAmOfels670,3165
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risk/_network/__init__.py,sha256=YrAMfhL0CMWQb3sY-mn1VxK44zZAWeFAvHrBONH9I-A,127
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risk/_network/_io.py,sha256=uiYmbKVsSRr4-TsY9KvRggDghtZv8qoxXac3QYs1lTI,28750
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risk/_network/_graph/__init__.py,sha256=SFgxgxUiZK4vvw6bdQ04DSMXEr8xjMaQV-Wne6wAIqM,104
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risk/_network/_graph/_api.py,sha256=zH7n-ulqLcbgHdAfLu1yWErdR5G4LgSqR7DcN2qApco,8520
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risk/_network/_graph/_graph.py,sha256=x2EWT_ZVwxh7m9a01yG4WMdmAxBxiaxX3CvkqP9QAXE,12486
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risk/_network/_graph/_stats.py,sha256=6mxZkuL6LJlwKDsBbP22DAVkNUEhq-JZwYMKhFKD08k,7359
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risk/_network/_graph/_summary.py,sha256=4eGhCArssePDg4LXr3sg5bUpNn7KFK9oPZcCz5lJKEQ,10334
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risk/_network/_plotter/__init__.py,sha256=qFRtQKSBGIqmUGwmA7VPL7hTHBb9yvRIt0nLISXnwkY,84
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risk/_network/_plotter/_api.py,sha256=MHZIMTlul2u-Ve5m9r-eUljI2oC3IRklNn7AVlfmzGs,1773
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risk/_network/_plotter/_canvas.py,sha256=H7rPz4Gv7ED3bDHMif4cf2usdU4ifmxzXeug5A_no68,13599
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risk/_network/_plotter/_contour.py,sha256=E3ILjlv-VBSbK3ClwObB84TvP1D48_B47ODXwtApjIE,15557
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risk/_network/_plotter/_labels.py,sha256=8JXzEOIBQefwr1ngF-2ZYCnYLZXs2Erz-R1c28NnsL0,46915
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risk/_network/_plotter/_network.py,sha256=W9eUUER9_qi1ubGaUfMp12gxAANZP-JNFKcG27I1nAk,14198
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risk/_network/_plotter/_plotter.py,sha256=F2hw-spUdsXjvuG36o0YFR3Pnd-CZOHYUq4vW0Qxzlk,6011
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risk/_network/_plotter/_utils/__init__.py,sha256=JXgjKiBWvXx0X2IeFnrOh5YZQGQoELbhJZ0Zh2mFEOo,211
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risk/_network/_plotter/_utils/_colors.py,sha256=JCliSvz8_-TsjilaRHSEsqdXFBUYlzhXKOSRGdCm9Kw,19177
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risk/_network/_plotter/_utils/_layout.py,sha256=GyGLc2U1WWUVL1Te9uPi_CLqlW_E4TImXRAL5TeA5D8,3633
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risk_network-0.0.14b0.dist-info/licenses/LICENSE,sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM,35147
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risk_network-0.0.14b0.dist-info/METADATA,sha256=rshHTAf4wXudUsCwUIQpK8VZzmb5-f_c9_fYfrYXdm0,6853
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risk_network-0.0.14b0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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risk_network-0.0.14b0.dist-info/top_level.txt,sha256=NX7C2PFKTvC1JhVKv14DFlFAIFnKc6Lpsu1ZfxvQwVw,5
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risk_network-0.0.14b0.dist-info/RECORD,,
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risk/annotation/__init__.py
DELETED
risk/log/__init__.py
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risk/neighborhoods/__init__.py
DELETED
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"""
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risk/neighborhoods/stats
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~~~~~~~~~~~~~~~~~~~~~~~~
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"""
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from risk.neighborhoods.stats.permutation import compute_permutation_test
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from risk.neighborhoods.stats.tests import (
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compute_binom_test,
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compute_chi2_test,
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compute_hypergeom_test,
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compute_poisson_test,
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compute_zscore_test,
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)
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risk/network/__init__.py
DELETED
risk/network/graph/__init__.py
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risk/network/plotter/__init__.py
DELETED
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risk/__init__.py,sha256=64n4kde42cujId1bWBqXdxznWZaSEVq1NvS_gqlvt1g,127
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risk/risk.py,sha256=Wjuxob5bI70Tpz9t71i05g94AQ3qXEMjfEcm5IV9HSY,1118
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risk/annotation/__init__.py,sha256=1EbGo41ClQb5ESTtitjOhrZhaLzzwr5aT-RYDX8w-h4,185
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risk/annotation/annotation.py,sha256=EExSfYbZu4EUyA5vl7EDadGefyf-sJw_UmUxgXbuKng,15151
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risk/annotation/io.py,sha256=Rhob9GKgdfHZIMVyaRJa15YOAPMDbqg3y_b8vckPeoM,12391
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risk/annotation/nltk_setup.py,sha256=14B6L56_dwIgAOC9Rl4dNd4-b-aEngUCoJP9L9kEilU,3572
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risk/log/__init__.py,sha256=en-hKzuFtQWos4oZd8PxJ9u9Pe5bdihiqH9-qk_5ppw,217
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risk/log/console.py,sha256=PgjyEvyhYLUSHXPUKEqOmxsDsfrjPICIgqo_cAHq0N8,4575
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risk/log/parameters.py,sha256=FnP-kdg0Kip0SyxFEn7su7BG51FbMtTfm3Rk96cnCoc,5801
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risk/neighborhoods/__init__.py,sha256=CNS0VNbh_IdxldXjDkPqeTrxgY4hqi_Tc_MTADW_tzQ,182
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risk/neighborhoods/api.py,sha256=TXbjbHfQDi2eZeD9086BBsUjhDiJq2BNEYALiGs_rPc,23299
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risk/neighborhoods/community.py,sha256=0YdTh6wgMLiGMdtlaD7Vu_uxOVoZ9vDBjxbkglkrTV8,17808
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risk/neighborhoods/domains.py,sha256=9cWcGYGALcYruvAjWKztnEZlnYyT6DSoAPP6VsgA2wQ,14601
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risk/neighborhoods/neighborhoods.py,sha256=ykJu2d0Z6gRCOAMyBtpWpxXQ2Dei4nOv7w3XN0LpiX8,21672
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risk/neighborhoods/stats/__init__.py,sha256=1evLEAa7trCWj2DapCV4vW_f0zsyKHqTsn4--E_fDPg,306
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risk/neighborhoods/stats/tests.py,sha256=Z14H8G2qHzM5AOhKqp4YfCOL_wp3QwzUzfeGQJOqTTU,12060
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risk/neighborhoods/stats/permutation/__init__.py,sha256=V-uLSoi4SIPKjSRl7rhcDR4HJ4tquAn3QxNTXH9KzK8,169
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risk/neighborhoods/stats/permutation/permutation.py,sha256=k9-Yw-1wWBqeD9cGcTh_d2ypqN-HzoJrcCEAR5-BK0o,10673
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risk/neighborhoods/stats/permutation/test_functions.py,sha256=Wuop4WDY3foGeKp-hMGc2Gdqf85s-x9BDXGB8ifp0oE,3147
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risk/network/__init__.py,sha256=C9GisdyJM7fizwUIipy1vC4lbry9ceqLn1iBcW0-mZg,34
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risk/network/io.py,sha256=oD7jZ0qrZr78OHJHDS2hj9J5FsYpqV7vJ3TNmJfC9Cg,27903
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risk/network/graph/__init__.py,sha256=iG6IlE8xtAyF6_NuCBUpsJrjrjd1vsXO1Ajsr0K8EA0,46
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risk/network/graph/api.py,sha256=gXheVl1xw7vFDHOOQdRxCFwVy4ajEJ1dk4GQxm13sCI,8528
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risk/network/graph/graph.py,sha256=jPNJea9JiLKedGFvSKmZ5Kf2R9go0HJkZ4wYNJwZRJI,12410
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risk/network/graph/stats.py,sha256=xITodchaF8Pgngynil_GM9IeMBtxuraPX-Gjp6WBEMY,7338
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risk/network/graph/summary.py,sha256=UZvZk5w2BZ5zs8IDfr-YYYBr2eM1wmXh0FKp_p9UdB4,10260
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risk/network/plotter/__init__.py,sha256=9kdeONe8NaJvJ5FO7eOdZiobqL4CeR7q2MghG4z6Kt8,50
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risk/network/plotter/api.py,sha256=GFP0n_0-tSdCZQd6cuaH3w55953sXCR02nwyJhAEqK4,1789
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risk/network/plotter/canvas.py,sha256=i8i-ARLCNsHkAW3W_E63PpbEjmQLJplpqK6mSivgz4k,13610
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risk/network/plotter/contour.py,sha256=TJA4C9G07iFBBSuSCYGZJ6NZfXGWH8zVw0LC2eqU3JA,15540
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risk/network/plotter/labels.py,sha256=89Ege5NkfFMZJXw_mF-rhtIPa4-S8UKtYSkj8ty_VeQ,46805
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risk/network/plotter/network.py,sha256=c9rPQ5mjil0sxVQnprRaKMAUqT6PZmKiATWz0m-TvQU,14185
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risk/network/plotter/plotter.py,sha256=WZcOrBW3vBQ_aLwv8c8pXJO8ZlyswHHHfEsiLxzEYaI,6121
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risk/network/plotter/utils/colors.py,sha256=xZt4877ORTQqySiMh-tUGe0sXvhLbXO04iGNeBDkbbw,19144
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risk/network/plotter/utils/layout.py,sha256=Lty16T-Q-oWwo9fXqm-nnS_dMS3BMhuFt4SFqxFC3Ng,3610
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risk_network-0.0.13b4.dist-info/licenses/LICENSE,sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM,35147
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risk_network-0.0.13b4.dist-info/METADATA,sha256=Atc8HAHrKKIbdjfZUx4bwo5GifV3OGTrShjr0Ewd2T4,6853
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risk_network-0.0.13b4.dist-info/WHEEL,sha256=GHB6lJx2juba1wDgXDNlMTyM13ckjBMKf-OnwgKOCtA,91
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risk_network-0.0.13b4.dist-info/top_level.txt,sha256=NX7C2PFKTvC1JhVKv14DFlFAIFnKc6Lpsu1ZfxvQwVw,5
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risk_network-0.0.13b4.dist-info/RECORD,,
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