risk-network 0.0.12b1__py3-none-any.whl → 0.0.12b2__py3-none-any.whl

risk/__init__.py

@@ -7,4 +7,4 @@ RISK: Regional Inference of Significant Kinships
 
 from risk.risk import RISK
 
-__version__ = "0.0.12-beta.1"
+__version__ = "0.0.12-beta.2"

risk/network/graph/graph.py

@@ -71,14 +71,18 @@ class Graph:
         # NOTE: Only after the above attributes are initialized, we can create the summary
         self.summary = Summary(annotations, neighborhoods, self)
 
-    def pop(self, domain_id: str) -> None:
-        """Remove domain ID from instance domain ID mappings. This can be useful for cleaning up
-        domain-specific mappings based on a given criterion, as domain attributes are stored and
-        accessed only in dictionaries modified by this method.
+    def pop(self, domain_id: int) -> List[str]:
+        """Remove a domain ID from the graph and return the corresponding node labels.
 
         Args:
-            key (str): The domain ID key to be removed from each mapping.
+            key (int): The domain ID key to be removed from each mapping.
+
+        Returns:
+            List[str]: A list of node labels associated with the domain ID.
         """
+        # Get the node labels associated with the domain ID
+        node_labels = self.domain_id_to_node_labels_map.get(domain_id, [])
+
         # Define the domain mappings to be updated
         domain_mappings = [
             self.domain_id_to_node_ids_map,
@@ -97,6 +101,8 @@ class Graph:
                 domain_info["domains"].remove(domain_id)
                 domain_info["significances"].pop(domain_id)
 
+        return node_labels
+
     def _create_domain_id_to_node_ids_map(self, domains: pd.DataFrame) -> Dict[int, Any]:
         """Create a mapping from domains to the list of node IDs belonging to each domain.
 

{risk_network-0.0.12b1.dist-info → risk_network-0.0.12b2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: risk-network
-Version: 0.0.12b1
+Version: 0.0.12b2
 Summary: A Python package for biological network analysis
 Author-email: Ira Horecka <ira89@icloud.com>
 License: GPL-3.0-or-later

{risk_network-0.0.12b1.dist-info → risk_network-0.0.12b2.dist-info}/RECORD

@@ -1,4 +1,4 @@
-risk/__init__.py,sha256=ADVxFWQawaQ0uFwnpUUmlwzs9FIxFA9tFem9_pB5rn4,127
+risk/__init__.py,sha256=nLYCewXh0bv7m9yMONHuLKUYeROqeAHT1qeYuTnrp0s,127
 risk/risk.py,sha256=_Zs8cC4V0eqzfaMbq9M50ir815dbYS-oyTPlrySuMLw,1121
 risk/annotations/__init__.py,sha256=cW2qf4se_Ehmo69mZE3aKy_LzWlTnffcI8KOKqqCock,192
 risk/annotations/annotations.py,sha256=KtFyCiCnoAkhin3HKDBtkNcz5imjpysrmEfQKUwyqh8,14737
@@ -21,7 +21,7 @@ risk/network/__init__.py,sha256=C9GisdyJM7fizwUIipy1vC4lbry9ceqLn1iBcW0-mZg,34
 risk/network/io.py,sha256=KXtQPFXYMBe8QNZQtp75AJHzaQhzJX9au4ZrVCZhaJg,27886
 risk/network/graph/__init__.py,sha256=iG6IlE8xtAyF6_NuCBUpsJrjrjd1vsXO1Ajsr0K8EA0,46
 risk/network/graph/api.py,sha256=ThlQ3MCCa4EkDWfflY_RcBsK_ekxe-dyhkSLEY9-udo,8550
-risk/network/graph/graph.py,sha256=69frjpl2z7JjIyVqBhlOUzv4keDXOBDzwKcrCNS1KGM,12334
+risk/network/graph/graph.py,sha256=p9nRiqk6kgp07X3sNhrvqwNb8Knr06k-PztN0YiZLE0,12427
 risk/network/graph/stats.py,sha256=xITodchaF8Pgngynil_GM9IeMBtxuraPX-Gjp6WBEMY,7338
 risk/network/graph/summary.py,sha256=_3zuPFSDegti23uRpa24pbE6sUYCt7ucYQXtFNKMbX4,10277
 risk/network/plotter/__init__.py,sha256=9kdeONe8NaJvJ5FO7eOdZiobqL4CeR7q2MghG4z6Kt8,50
@@ -33,8 +33,8 @@ risk/network/plotter/network.py,sha256=0VySlJ4n3tkHsOhVVSa3yiSppT8y1dmIwa-DhRn0t
 risk/network/plotter/plotter.py,sha256=KJ_7Ye98ha6mchEaNY8kT0qCHAiGWZUzPiI3RCI9Wx0,5975
 risk/network/plotter/utils/colors.py,sha256=Pqa5pYZi8qdP9AsdXVY6u4a8sEKM3cF8gBP9TQwDTfI,19015
 risk/network/plotter/utils/layout.py,sha256=OPqV8jzV9dpnOhYU4SYMSfsIXalVzESrlBSI_Y43OGU,3640
-risk_network-0.0.12b1.dist-info/licenses/LICENSE,sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM,35147
-risk_network-0.0.12b1.dist-info/METADATA,sha256=Lyrx0dcjEsfc-hC8GS82asYFs-BSySsTI1UFhKdoX4A,6667
-risk_network-0.0.12b1.dist-info/WHEEL,sha256=SmOxYU7pzNKBqASvQJ7DjX3XGUF92lrGhMb3R6_iiqI,91
-risk_network-0.0.12b1.dist-info/top_level.txt,sha256=NX7C2PFKTvC1JhVKv14DFlFAIFnKc6Lpsu1ZfxvQwVw,5
-risk_network-0.0.12b1.dist-info/RECORD,,
+risk_network-0.0.12b2.dist-info/licenses/LICENSE,sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM,35147
+risk_network-0.0.12b2.dist-info/METADATA,sha256=KMVEl3qIYJnczRiAu-7L7OU5eF69XdtWXuazPTsmS68,6667
+risk_network-0.0.12b2.dist-info/WHEEL,sha256=SmOxYU7pzNKBqASvQJ7DjX3XGUF92lrGhMb3R6_iiqI,91
+risk_network-0.0.12b2.dist-info/top_level.txt,sha256=NX7C2PFKTvC1JhVKv14DFlFAIFnKc6Lpsu1ZfxvQwVw,5
+risk_network-0.0.12b2.dist-info/RECORD,,