refrax 0.0.2__py3-none-any.whl

refrax/__init__.py

@@ -0,0 +1,10 @@
+from importlib.metadata import version as _version, PackageNotFoundError
+
+try:
+    __version__ = _version(__name__)
+except PackageNotFoundError:
+    pass
+
+from refrax.lens import Lens as Lens
+from refrax.traversal import Traversal as Traversal
+from refrax.mixin import OpticsMixin as OpticsMixin

refrax/custom_types.py

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+from typing import TypeVar, Literal, Any
+
+TRoot = TypeVar("TRoot")
+PathOp = Literal["attr", "item"]
+PathStep = tuple[PathOp, Any]

refrax/lens.py

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+from typing import Any, Callable, Generic, cast
+
+import equinox as eqx
+
+from refrax.custom_types import TRoot, PathOp, PathStep
+from refrax.traversal import Traversal
+
+
+class Lens(Generic[TRoot]):
+    """A fluent interface for mutating immutable Equinox PyTrees.
+
+    Uses `eqx.tree_at` under the hood to functionally swap leaves in the PyTree,
+    making it completely safe for use inside JAX JIT/vmap boundaries.
+
+    Args:
+        tree (TRoot): The root immutable object to be mutated.
+        path (list[PathStep] | None): The current traversal path from the root, by default None.
+    """
+    _tree: TRoot
+    _path: list[PathStep]
+
+    def __init__(self, tree: TRoot, path: list[PathStep] | None = None) -> None:
+        self._tree = tree
+        self._path = path if path is not None else []
+
+    def __getattr__(self, name: str) -> "Lens[TRoot]":
+        """Focuses the lens on a named attribute.
+
+        Args:
+            name (str): The name of the attribute.
+
+        Returns:
+            Lens[TRoot]: A new Lens focused on the specified attribute.
+        """
+        if name.startswith('__') and name.endswith('__'):
+            raise AttributeError(f"'{type(self).__name__}' object has no attribute '{name}'")
+        return Lens(self._tree, self._path + [("attr", name)])
+
+    def __getitem__(self, key: Any) -> "Lens[TRoot]":
+        """Focuses the lens on a collection item, dictionary key, or attribute.
+
+        If the key is a string, it is treated as an attribute access 
+        (equivalent to `getattr`). Otherwise, it is treated as an item access.
+
+        Args:
+            key (Any): The index, key, or attribute name.
+
+        Returns:
+            Lens[TRoot]: A new Lens focused on the specified item or attribute.
+        """
+        op: PathOp = "attr" if isinstance(key, str) else "item"
+        return Lens(self._tree, self._path + [(op, key)])
+
+    # --- The Bridge to Traversal ---
+    
+    def select(self, *names: str) -> Traversal[TRoot]:
+        """Branches the Lens into a Traversal targeting multiple attributes.
+
+        Args:
+            *names (str): A variable number of attribute names to target.
+
+        Returns:
+            Traversal[TRoot]: A Traversal object focused on the specified attributes.
+
+        Examples:
+            >>> new_model = model.at.select('source_a', 'source_b').set(new_val)
+        """
+        sub_paths: list[list[PathStep]] = [[("attr", name)] for name in names]
+        return Traversal(self._tree, self._path, sub_paths)
+
+    def each(self) -> Traversal[TRoot]:
+        """Transforms a focus on a collection into a Traversal of its elements.
+
+        Returns:
+            Traversal[TRoot]: A Traversal object focused on every item in the target collection.
+
+        Raises:
+            TypeError: If the current focus is not a dictionary, list, or tuple.
+
+        Examples:
+            >>> new_model = model.at.sources.each().apply(lambda x: x * 2)
+        """
+        target = self.get()
+        sub_paths: list[list[PathStep]] = []
+        
+        if isinstance(target, dict):
+            sub_paths = [[("item", key)] for key in target.keys()]
+        elif isinstance(target, (list, tuple)):
+            sub_paths = [[("item", i)] for i in range(len(target))]
+        else:
+            raise TypeError(f"Cannot iterate over {type(target).__name__} with .each()")
+            
+        return Traversal(self._tree, self._path, sub_paths)
+
+    def filter(self, predicate: Callable[[Any], bool]) -> Traversal[TRoot]:
+        """Traverses all attributes of the current focus that match a condition.
+
+        Args:
+            predicate (Callable[[Any], bool]): A function that takes an attribute value 
+                and returns True if it should be included in the Traversal.
+
+        Returns:
+            Traversal[TRoot]: A Traversal object focused on all matching attributes.
+
+        Examples:
+            >>> is_active = lambda s: getattr(s, 'is_active', False)
+            >>> new_model = model.at.filter(is_active).apply(freeze)
+        """
+        target = self.get()
+        sub_paths: list[list[PathStep]] = []
+        
+        for attr_name in dir(target):
+            if not attr_name.startswith('_'):
+                try:
+                    val = getattr(target, attr_name)
+                    if predicate(val):
+                        sub_paths.append([("attr", attr_name)])
+                except Exception:
+                    pass  # Skip properties that error on read
+                    
+        return Traversal(self._tree, self._path, sub_paths)
+
+    # --- Core Retrieval & eqx.tree_at Logic ---
+
+    def _get_target_from(self, tree: Any) -> Any:
+        """Traverses the recorded path from a specified tree to return the target node.
+        
+        This is designed to be passed cleanly into `eqx.tree_at`.
+
+        Args:
+            tree (Any): The tree to traverse.
+
+        Returns:
+            Any: The resolved target node.
+        """
+        curr: Any = tree
+        for op_type, val in self._path:
+            if op_type == "attr":
+                curr = getattr(curr, cast(str, val))
+            elif op_type == "item":
+                curr = curr[val]
+        return curr
+
+    def get(self) -> Any:
+        """Extracts the currently focused value.
+
+        Returns:
+            Any: The value at the end of the Lens path.
+        """
+        return self._get_target_from(self._tree)
+
+    def set(self, value: Any) -> TRoot:
+        """Sets the focused target to a specific value.
+
+        Args:
+            value (Any): The new value to assign.
+
+        Returns:
+            TRoot: A new instance of the root tree with the updated value.
+        """
+        if not self._path:
+            return cast(TRoot, value)
+            
+        return eqx.tree_at(self._get_target_from, self._tree, replace=value)
+
+    def apply(self, func: Callable[[Any], Any]) -> TRoot:
+        """Applies a transformation function to the focused target.
+
+        Args:
+            func (Callable[[Any], Any]): The function to transform the current value.
+
+        Returns:
+            TRoot: A new instance of the root tree with the updated value.
+        """
+        if not self._path:
+            return cast(TRoot, func(self._tree))
+            
+        return eqx.tree_at(self._get_target_from, self._tree, replace_fn=func)

refrax/mixin.py

@@ -0,0 +1,10 @@
+from typing import Self
+from refrax.lens import Lens
+
+class OpticsMixin:
+    """
+    Adds an `.at` property to your class which returns `refrax.Lens` on `self`.
+    """
+    @property
+    def at(self) -> Lens[Self]:
+        return Lens(self)

refrax/traversal.py

@@ -0,0 +1,130 @@
+from typing import Generic, Any, Callable, cast
+
+import equinox as eqx
+
+from refrax.custom_types import TRoot, PathStep, PathOp
+
+
+class Traversal(Generic[TRoot]):
+    """Represents a multi-target focus within an immutable PyTree.
+
+    Applies mutations across all targets simultaneously using `eqx.tree_at`, 
+    making it fully compatible with JAX JIT compilation and tracing.
+
+    Args:
+        tree (TRoot): The root immutable object (e.g., Equinox module or dataclass).
+        base_path (list[PathStep]): The shared path from the root to the divergence point.
+        sub_paths (list[list[PathStep]]): A list of diverging paths, one for each targeted element.
+    """
+    def __init__(self, tree: TRoot, base_path: list[PathStep], sub_paths: list[list[PathStep]]) -> None:
+        self._tree = tree
+        self._base_path = base_path
+        self._sub_paths = sub_paths
+
+    def __getattr__(self, name: str) -> "Traversal[TRoot]":
+        """Broadens the traversal by appending an attribute access to every currently focused target.
+
+        Args:
+            name (str): The name of the attribute to access on all targets.
+
+        Returns:
+            Traversal[TRoot]: A new Traversal focused one level deeper.
+        """
+        new_sub_paths = [path + [("attr", name)] for path in self._sub_paths]
+        return Traversal(self._tree, self._base_path, new_sub_paths)
+
+    def __getitem__(self, key: Any) -> "Traversal[TRoot]":
+        """Broadens the traversal by appending an item/index access to every currently focused target. 
+        
+        Strings are treated as attributes.
+
+        Args:
+            key (Any): The index, dictionary key, or attribute string to access.
+
+        Returns:
+            Traversal[TRoot]: A new Traversal focused one level deeper.
+        """
+        op: PathOp = "attr" if isinstance(key, str) else "item"
+        new_sub_paths = [path + [(op, key)] for path in self._sub_paths]
+        return Traversal(self._tree, self._base_path, new_sub_paths)
+
+    def _get_targets_from(self, tree: Any) -> tuple[Any, ...]:
+        """Internal generator for eqx.tree_at. 
+        
+        Dynamically walks the paths to return all target nodes from a given root tree 
+        (or Equinox tracer).
+        
+        Args:
+            tree (Any): The root tree or Equinox tracer to walk.
+            
+        Returns:
+            tuple[Any, ...]: A tuple of all resolved target nodes.
+        """
+        targets = []
+        for path in self._sub_paths:
+            curr = tree
+            for op, val in self._base_path + path:
+                if op == "attr":
+                    curr = getattr(curr, cast(str, val))
+                elif op == "item":
+                    curr = curr[val]
+            targets.append(curr)
+        return tuple(targets)
+
+    def apply(self, func: Callable[[Any], Any]) -> TRoot:
+        """Applies a function to all selected targets simultaneously.
+
+        Args:
+            func (Callable[[Any], Any]): The transformation function to apply to each target.
+
+        Returns:
+            TRoot: A new instance of the root tree with all targets updated.
+        """
+        if not self._sub_paths:
+            return self._tree
+            
+        return eqx.tree_at(self._get_targets_from, self._tree, replace_fn=func)
+
+    def set(self, value: Any) -> TRoot:
+        """Sets all selected targets to a specific value.
+
+        Args:
+            value (Any): The new value to assign to all targets.
+
+        Returns:
+            TRoot: A new instance of the root tree with the updated values.
+        """
+        if not self._sub_paths:
+            return self._tree
+
+        # eqx.tree_at requires the replacements tuple to match the length of the targets tuple
+        replacements = tuple(value for _ in self._sub_paths)
+        return eqx.tree_at(self._get_targets_from, self._tree, replace=replacements)
+
+    def get(self) -> list[Any]:
+        """Extracts all focused values.
+
+        Returns:
+            list[Any]: A list containing the values of all currently focused targets.
+        """
+        return list(self._get_targets_from(self._tree))
+    
+    def filter(self, predicate: Callable[[Any], bool]) -> "Traversal[TRoot]":
+        """Filters the currently focused targets, keeping only those that match the condition.
+
+        Args:
+            predicate (Callable[[Any], bool]): A function that returns True to keep a target, 
+                or False to drop it.
+
+        Returns:
+            Traversal[TRoot]: A new Traversal focused only on the targets that passed the filter.
+        """
+        from refrax.lens import Lens
+        
+        filtered_paths = []
+        for path in self._sub_paths:
+            target_val = Lens(self._tree, self._base_path + path).get()
+            if predicate(target_val):
+                filtered_paths.append(path)
+                
+        return Traversal(self._tree, self._base_path, filtered_paths)

refrax-0.0.2.dist-info/METADATA

@@ -0,0 +1,75 @@
+Metadata-Version: 2.4
+Name: refrax
+Version: 0.0.2
+Summary: Chainable optics for JAX PyTrees
+Author-email: Gary Allen <gvcallen@gmail.com>
+Project-URL: homepage, https://github.com/gvcallen/refrax
+Description-Content-Type: text/markdown
+License-File: LICENSE
+Requires-Dist: equinox
+Provides-Extra: docs
+Requires-Dist: mkdocs; extra == "docs"
+Requires-Dist: mkdocs-material; extra == "docs"
+Requires-Dist: mkdocs-macros-plugin; extra == "docs"
+Requires-Dist: mkdocs-include-markdown-plugin; extra == "docs"
+Requires-Dist: mkdocstrings[python]; extra == "docs"
+Provides-Extra: test
+Requires-Dist: pytest; extra == "test"
+Requires-Dist: pytest-codeblocks; extra == "test"
+Dynamic: license-file
+
+# Refrax
+
+**Refrax** is a tiny library implementing the *optics* functional pattern for [JAX](https://github.com/jax-ml/jax) PyTrees.
+
+## Installation
+
+Refrax can be installed using pip:
+
+``
+pip install refrax
+``
+
+## Quick example
+
+This example demonstrates the Mixin approach on an [Equinox](https://github.com/patrick-kidger/equinox) module, which adds `.at` to your class and simply returns `refrax.Lens(self)`.
+
+We define a dummy model with the mixin:
+```python
+from refrax import OpticsMixin
+
+import equinox as eqx
+import jax
+
+class Model(eqx.Module, OpticsMixin):
+    core: eqx.nn.Linear
+    head: eqx.nn.Linear
+    dropout: float
+
+key1, key2 = jax.random.split(jax.random.key(0))
+model = Model(
+    core=eqx.nn.Linear(in_features=5, out_features=5, key=key1),
+    head=eqx.nn.Linear(in_features=5, out_features=2, key=key2),
+    dropout=0.5
+)
+```
+
+Then we can do updates using `.at`:
+```python
+new_model = model.at.dropout.set(0.1)
+new_model = model.at.select("core", "head").bias.apply(lambda b: b + 1.0)
+
+new_model.core.bias
+# [1. 1. 1. 1. 1.]
+
+new_model.head.bias
+# [1. 1.]
+```
+
+## Documentation
+
+Documentation is available [here](https://gvcallen.github.io/refrax/).
+
+## Related
+
+The library uses [Equinox](https://github.com/patrick-kidger/equinox) (specifically `eqx.tree_at`) under the hood.

refrax-0.0.2.dist-info/RECORD

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+refrax/custom_types.py,sha256=w9TUKV1m-bM2hnR1gaU5DD1ZZTWK7sc4nKddTLa11Qs,129
+refrax/lens.py,sha256=yyo7KhzqbLY5HxfsV7YdSb6RL-58uWb9G0yhG0utL5I,6319
+refrax/mixin.py,sha256=3_LSCZBbhpqVCxKhU5hwa7Z5cz8JcWknGqGhdsjxNMw,240
+refrax/traversal.py,sha256=-fvUeVMYwIrdToq8bYtBpOr9NJ07qr2fEOSdZz01h10,4929
+refrax-0.0.2.dist-info/licenses/LICENSE,sha256=VcF2hrF5o8OMDSCLUt0ti6_R2WOe7XgQOjwgTllOq6c,11415
+refrax-0.0.2.dist-info/METADATA,sha256=tc_srZQYamzesRRdor_-splACdb8rwsY2SeGG8lKdNc,1997
+refrax-0.0.2.dist-info/WHEEL,sha256=aeYiig01lYGDzBgS8HxWXOg3uV61G9ijOsup-k9o1sk,91
+refrax-0.0.2.dist-info/top_level.txt,sha256=iOeuLHuy1zcRfX6hqksEI9qxQrMPMQ5emr79tylxuhE,7
+refrax-0.0.2.dist-info/RECORD,,

refrax-0.0.2.dist-info/WHEEL

@@ -0,0 +1,5 @@
+Wheel-Version: 1.0
+Generator: setuptools (82.0.1)
+Root-Is-Purelib: true
+Tag: py3-none-any
+

refrax-0.0.2.dist-info/licenses/LICENSE

@@ -0,0 +1,201 @@
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+
+   Copyright Gary Allen
+
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
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+
+       [http://www.apache.org/licenses/LICENSE-2.0](http://www.apache.org/licenses/LICENSE-2.0)
+
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refrax-0.0.2.dist-info/top_level.txt

@@ -0,0 +1 @@
+refrax