reflexive 2.0.0__py3-none-any.whl → 2.1.0__py3-none-any.whl

reflexive/analysis_functions.py

@@ -99,9 +99,15 @@ def _add_res_weights(df):
     temp_df['res_weights'] = temp_df.res_interactions.apply(_calc_res_weights)
     return temp_df
 
+def _add_semantic_weights(df,ranking_factors={}):
+    temp_df = df.copy()
+    ranks = partial(_calc_semantic_weights,factors=ranking_factors)
+    temp_df['semantic_weights'] = temp_df.res_weights.apply(ranks)
+    return temp_df
+
 def _add_res_adj_matrix(df):
     temp_df = df.copy()
-    temp_df['res_adj_matrix'] = temp_df.res_weights.apply(_create_adj_matrix)
+    temp_df['res_adj_matrix'] = temp_df.semantic_weights.apply(_create_adj_matrix)
     return temp_df
 
 def _get_res_sequence(offsets_clean):
@@ -134,6 +140,16 @@ def _calc_res_weights(interactions:dict[tuple,int])->dict[tuple,float]:
     for edge,count in interactions.items():
         weights[edge] = round(count/(max_count),2)
     return weights
+
+
+
+def _calc_semantic_weights(weights:dict[tuple,float], factors:dict[tuple,float]={})->dict[tuple,float]:
+    if not factors:
+        return weights
+    else:
+        for edge,w in weights.items():
+            weights[edge] = factors[edge] * w
+        return weights
         
 
 def _create_adj_matrix(weights:dict[tuple,float])->list[list[float]]:

reflexive/res_analysis.py

@@ -20,6 +20,7 @@ from reflexive.analysis_functions import (
     _add_res_sequence,
     _add_res_interactions,
     _add_res_weights,
+    _add_semantic_weights,
     _add_res_adj_matrix,
     _jaccard_similarity,
     _cosine_similarity,
@@ -39,6 +40,12 @@ class RES_analyser:
     config:dict
     
     logger = logging.getLogger(__name__)
+    
+    ranking_factors = {('RR','RR'):0.5, ('NR','RR'):0.9, ('AR','RR'):0.9, ('AF','RR'):0.8, ('EP','RR'):0.7,  #Alpha sorted tuples
+                        ('NR','NR'):0.6, ('AR','NR'):1.0, ('AF','NR'):0.8, ('EP','NR'):0.7, 
+                        ('AR','AR'):0.6, ('AF','AR'):0.8, ('AR','EP'):0.7, 
+                        ('AF','AF'):0.5, ('AF','EP'):0.6, 
+                        ('EP','EP'):0.5}
 
     
     def __init__(self,parameters,prefix="res",postfix=None,dir="/data/")->None:
@@ -113,8 +120,12 @@ class RES_analyser:
         df = _add_res_sequence(df)
         df = _add_res_interactions(df)
         df = _add_res_weights(df)
+        df = _add_semantic_weights(df,self.ranking_factors)
         df = _add_res_adj_matrix(df)
         return df
+    
+    # def add_semantic_weights(self,df):
+    #     return _add_semantic_weights(df,self.ranking_factors)
 
     # Graph Jaccard Similarity
     def get_jaccard_similarity(self,g1,g2):

{reflexive-2.0.0.dist-info → reflexive-2.1.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: reflexive
-Version: 2.0.0
+Version: 2.1.0
 Summary: Supports AWS Reflexive Expressions Systems (RES) Analysis
 Project-URL: Repository, https://github.com/nlytx/reflexive.git
 Author-email: Andrew Gibson <andrew@nlytx.io>

reflexive-2.1.0.dist-info/RECORD

@@ -0,0 +1,9 @@
+reflexive/__init__.py,sha256=UkA6xvSu40CGYguUuiBqBMnPBkld0h0GR9UnZrptdZI,167
+reflexive/analysis_functions.py,sha256=Qlod0svjBu9kRtGwPL-tPWnrYKLO-QTe07jSrxHZ6-k,14468
+reflexive/display_functions.py,sha256=2LdkINOgmZfiV7nkW0x_IeimxW3J80YIOOnjX21-RJA,5699
+reflexive/res_analysis.py,sha256=1W7Mph30s4qiV63CsN3IDxIydvYelOu28aVdsmF8gcs,7442
+reflexive/service.py,sha256=O0MX2BCHTSNG_eW6LHBN1FOjaNTCGgYgh7vsk58NNAk,1927
+reflexive-2.1.0.dist-info/METADATA,sha256=ulz3xZXF5W41XSq6ZEVF5Nfyi_18vBQ4ie6FA1F7bdo,574
+reflexive-2.1.0.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
+reflexive-2.1.0.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
+reflexive-2.1.0.dist-info/RECORD,,

reflexive-2.0.0.dist-info/RECORD

@@ -1,9 +0,0 @@
-reflexive/__init__.py,sha256=UkA6xvSu40CGYguUuiBqBMnPBkld0h0GR9UnZrptdZI,167
-reflexive/analysis_functions.py,sha256=cVTQtQnQigMJSCoQOtXI0_tyX49Re96Uz-ubx4UToUw,13966
-reflexive/display_functions.py,sha256=2LdkINOgmZfiV7nkW0x_IeimxW3J80YIOOnjX21-RJA,5699
-reflexive/res_analysis.py,sha256=jpb2Fh_jLEZmi4t6I6Q9nVE9LYRc_YJMGx12_co_69Y,6841
-reflexive/service.py,sha256=O0MX2BCHTSNG_eW6LHBN1FOjaNTCGgYgh7vsk58NNAk,1927
-reflexive-2.0.0.dist-info/METADATA,sha256=60ZmW9iHzBxs3BZeUm6KrsRq3LFwDQB6xGS_zuRaYoo,574
-reflexive-2.0.0.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
-reflexive-2.0.0.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
-reflexive-2.0.0.dist-info/RECORD,,