rdworks 0.45.1__py3-none-any.whl → 0.45.2__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
rdworks/__init__.py CHANGED
@@ -1,4 +1,4 @@
1
- __version__ = '0.45.1'
1
+ __version__ = '0.45.2'
2
2
 
3
3
  from rdworks.conf import Conf
4
4
  from rdworks.mol import Mol
rdworks/conf.py CHANGED
@@ -210,7 +210,7 @@ class Conf:
210
210
 
211
211
  if calculator.lower() == 'xTB'.lower():
212
212
  water = kwargs.get('water', None)
213
- result = GFN2xTB(self.rdmol).optimize(water=water)
213
+ results = GFN2xTB(self.rdmol).optimize(water=water)
214
214
  # SimpleNamespace(
215
215
  # PE = datadict['total energy'] * hartree2kcalpermol,
216
216
  # charges = datadict['partial charges'],
@@ -218,8 +218,8 @@ class Conf:
218
218
  # geometry = rdmol_opt,
219
219
  # )
220
220
  try:
221
- self.rdmol = result.geometry
222
- PE_final = result.PE
221
+ self.rdmol = results.geometry
222
+ PE_final = results.PE
223
223
  retcode = 0
224
224
  except:
225
225
  retcode = 1
@@ -382,7 +382,14 @@ class Conf:
382
382
  if isinstance(calculator, str):
383
383
  if calculator.lower() == 'xTB'.lower():
384
384
  water = kwargs.get('water', None)
385
- PE = GFN2xTB(self.rdmol).singlepoint(water=water)
385
+ results = GFN2xTB(self.rdmol).singlepoint(water=water)
386
+ # SimpleNamespace(
387
+ # PE = datadict['total energy'] * hartree2kcalpermol,
388
+ # Gsolv = Gsolv,
389
+ # charges = datadict['partial charges'],
390
+ # wbo = Wiberg_bond_orders,
391
+ # )
392
+ PE = results.PE
386
393
 
387
394
  elif calculator.lower() == 'MMFF94'.lower() or calculator.lower() == 'MMFF'.lower():
388
395
  mp = Chem.rdForceFieldHelpers.MMFFGetMoleculeProperties(self.rdmol, mmffVariant='MMFF94')
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: rdworks
3
- Version: 0.45.1
3
+ Version: 0.45.2
4
4
  Summary: Routine tasks built on RDKit and other tools
5
5
  Author-email: Sung-Hun Bae <sunghun.bae@gmail.com>
6
6
  Maintainer-email: Sung-Hun Bae <sunghun.bae@gmail.com>
@@ -1,5 +1,5 @@
1
- rdworks/__init__.py,sha256=4nKRLc9DB8UyBCp6htdSfcZ2pvpi4crr5WGkLpD1Bus,1368
2
- rdworks/conf.py,sha256=QolIR0iaDwdneFNuLXDNw6z_2rfnGTGsHr8_A-E9alY,33834
1
+ rdworks/__init__.py,sha256=SK_EU8Z7TY12w-fszqAQN03x6MydoGabg98zBOetlLI,1368
2
+ rdworks/conf.py,sha256=iQLb3Qg3pjGiiMVMJ5-d57BC1id3zxEhEGlhhrLrA_c,34162
3
3
  rdworks/descriptor.py,sha256=34T_dQ6g8v3u-ym8TLKbQtxIIV5TEo-d3pdedq3o-cg,2106
4
4
  rdworks/display.py,sha256=JR0gR26UpH-JCxVOaqXZCUj2MiGZSrx9Me87FncspVI,13469
5
5
  rdworks/ionized.py,sha256=5oIjMRpkX792RIpEEE2Ir96icfFaN_h21mSihhfQPAw,6713
@@ -66,8 +66,8 @@ rdworks/predefined/misc/reactive-part-3.xml,sha256=LgWHSEbRTVmgBoIO45xbTo1xQJs0X
66
66
  rdworks/predefined/misc/reactive.xml,sha256=syedoQ6VYUfRLnxy99ObuDniJ_a_WhrWAJbTKFfJ6VY,11248
67
67
  rdworks/xtb/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
68
68
  rdworks/xtb/wrapper.py,sha256=GqcseDk_sgmKbmKvDvObjNTk0tvAWYd7ZxjnLq0uVK0,21596
69
- rdworks-0.45.1.dist-info/licenses/LICENSE,sha256=UOkJSBqYyQUvtCp7a-vdCANeEcLE2dnTie_eB1By5SY,1074
70
- rdworks-0.45.1.dist-info/METADATA,sha256=ZkVfFGhi8IdIFpfPOvY3WuzX6WkCZJT1ty193RZxcxo,1967
71
- rdworks-0.45.1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
72
- rdworks-0.45.1.dist-info/top_level.txt,sha256=05C98HbvBK2axUBogC_hAT_CdpOeQYGnQ6vRAgawr8s,8
73
- rdworks-0.45.1.dist-info/RECORD,,
69
+ rdworks-0.45.2.dist-info/licenses/LICENSE,sha256=UOkJSBqYyQUvtCp7a-vdCANeEcLE2dnTie_eB1By5SY,1074
70
+ rdworks-0.45.2.dist-info/METADATA,sha256=DfyxepI-h3XBWrwQzzCLVQWBXs-mc5snQ4LIKbGzW4w,1967
71
+ rdworks-0.45.2.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
72
+ rdworks-0.45.2.dist-info/top_level.txt,sha256=05C98HbvBK2axUBogC_hAT_CdpOeQYGnQ6vRAgawr8s,8
73
+ rdworks-0.45.2.dist-info/RECORD,,