rdrpcatch 0.0.2__py3-none-any.whl → 0.0.3__py3-none-any.whl

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Files changed (6) hide show
  1. rdrpcatch/rdrpcatch_wrapper.py +2 -2
  2. {rdrpcatch-0.0.2.dist-info → rdrpcatch-0.0.3.dist-info}/METADATA +1 -1
  3. {rdrpcatch-0.0.2.dist-info → rdrpcatch-0.0.3.dist-info}/RECORD +6 -6
  4. {rdrpcatch-0.0.2.dist-info → rdrpcatch-0.0.3.dist-info}/WHEEL +0 -0
  5. {rdrpcatch-0.0.2.dist-info → rdrpcatch-0.0.3.dist-info}/entry_points.txt +0 -0
  6. {rdrpcatch-0.0.2.dist-info → rdrpcatch-0.0.3.dist-info}/licenses/LICENSE +0 -0
rdrpcatch/rdrpcatch_wrapper.py CHANGED
@@ -458,7 +458,7 @@ def run_scan(input_file, output_dir, db_options, db_dir, seq_type, verbose, e,in
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  outputs.mmseqs_e_search_output_path, 7, cpus, outputs.mmseqs_e_search_log_path).run_mmseqs_e_search()
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  utils.mmseqs_parser(outputs.mmseqs_tax_output_lca_path, outputs.mmseqs_e_search_output_path).tax_to_rdrpcatch(
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- outputs.rdrpcatch_output, outputs.extended_rdrpcatch_output, seq_type)
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+ outputs.rdrpcatch_output_tsv, outputs.extended_rdrpcatch_output, seq_type)
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  elif seq_type == 'prot':
@@ -622,7 +622,7 @@ def run_scan(input_file, output_dir, db_options, db_dir, seq_type, verbose, e,in
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  outputs.mmseqs_e_search_output_path, 7, cpus, outputs.mmseqs_e_search_log_path).run_mmseqs_e_search()
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  utils.mmseqs_parser(outputs.mmseqs_tax_output_lca_path, outputs.mmseqs_e_search_output_path).tax_to_rdrpcatch(
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- outputs.rdrpcatch_output, outputs.extended_rdrpcatch_output, seq_type)
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+ outputs.rdrpcatch_output_tsv, outputs.extended_rdrpcatch_output, seq_type)
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  end_time = logger.stop_timer(start_time, verbose)
{rdrpcatch-0.0.2.dist-info → rdrpcatch-0.0.3.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: rdrpcatch
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- Version: 0.0.2
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+ Version: 0.0.3
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  Dynamic: Summary
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  Project-URL: Home, https://github.com/dimitris-karapliafis/RdRpCATCH
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  Project-URL: Source, https://github.com/dimitris-karapliafis/RdRpCATCH
{rdrpcatch-0.0.2.dist-info → rdrpcatch-0.0.3.dist-info}/RECORD RENAMED
@@ -1,5 +1,5 @@
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  rdrpcatch/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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- rdrpcatch/rdrpcatch_wrapper.py,sha256=HrC2IqxLYFTroJwH1gDcU1QQU0gzs4YfBDzIN64Zc0A,30517
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+ rdrpcatch/rdrpcatch_wrapper.py,sha256=skWDoNCTEKc_7eA6HjBIGe8jk-J1xnzU-zyOzCiA_jo,30525
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  rdrpcatch/cli/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  rdrpcatch/cli/args.py,sha256=2E2gXY42hNasUP94HmPxpgVCA1glk_oN7D5ftbu6W2c,15805
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  rdrpcatch/rdrpcatch_scripts/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -12,8 +12,8 @@ rdrpcatch/rdrpcatch_scripts/plot.py,sha256=Y1mZL7rkKHFKEs2D7T2Qj2kpfiORmFwRLq1LY
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  rdrpcatch/rdrpcatch_scripts/run_pyhmmer.py,sha256=9zcMzaIwQ4_-NgYzG9kejxOBaDi-gbzaqpvZti8ZXA4,9008
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  rdrpcatch/rdrpcatch_scripts/run_seqkit.py,sha256=5y7DtJ6NLa4sRoBQOcjBfczKlqG_LibNrEqNmKLrHu0,4361
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  rdrpcatch/rdrpcatch_scripts/utils.py,sha256=Wx1GXhAPBfJw7x67sOu7WclZzMo0N3O-hxNYTVxc3v4,16780
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- rdrpcatch-0.0.2.dist-info/METADATA,sha256=JtS1E35XYcWSNu98shFxcpirpz021Ja4pxjjx0Izyz0,14000
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- rdrpcatch-0.0.2.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
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- rdrpcatch-0.0.2.dist-info/entry_points.txt,sha256=uiyoPO41jNz_KVOt2JdPak9NbVei-D8WQ6saMeMBFpE,53
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- rdrpcatch-0.0.2.dist-info/licenses/LICENSE,sha256=3jm5vKRMIaiETEFfNN34-oyWUShxZtmDmL38PNAwlUI,1120
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- rdrpcatch-0.0.2.dist-info/RECORD,,
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+ rdrpcatch-0.0.3.dist-info/METADATA,sha256=8tUKJfUQb2uEdha9EQuhI1OyEjXnWD4byUM6lzFBlZE,14000
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+ rdrpcatch-0.0.3.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
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+ rdrpcatch-0.0.3.dist-info/entry_points.txt,sha256=uiyoPO41jNz_KVOt2JdPak9NbVei-D8WQ6saMeMBFpE,53
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+ rdrpcatch-0.0.3.dist-info/licenses/LICENSE,sha256=3jm5vKRMIaiETEFfNN34-oyWUShxZtmDmL38PNAwlUI,1120
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+ rdrpcatch-0.0.3.dist-info/RECORD,,