rcsb-embedding-model 0.0.22__py3-none-any.whl → 0.0.24__py3-none-any.whl

rcsb_embedding_model/dataset/esm_prot_from_chain.py

@@ -68,9 +68,11 @@ class EsmProtFromChain(Dataset):
             chain_id=chain_id
         )
         for atom_ch in chain_iter(structure):
+            if len(atom_ch) == 0:
+                raise IOError(f"No atoms were found in structure chain {src_name}.{chain_id}")
             protein_chain = ProteinChain.from_atomarray(rename_atom_ch(atom_ch))
             return ESMProtein.from_protein_chain(protein_chain), item_name
-        return None
+        raise IOError(f"No atoms were found in structure chain {src_name}.{chain_id}")
 
 
 if __name__ == '__main__':

{rcsb_embedding_model-0.0.22.dist-info → rcsb_embedding_model-0.0.24.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: rcsb-embedding-model
-Version: 0.0.22
+Version: 0.0.24
 Summary: Protein Embedding Model for Structure Search
 Project-URL: Homepage, https://github.com/rcsb/rcsb-embedding-model
 Project-URL: Issues, https://github.com/rcsb/rcsb-embedding-model/issues
@@ -17,7 +17,7 @@ Description-Content-Type: text/markdown
 
 # RCSB Embedding Model
 
-**Version** 0.0.22
+**Version** 0.0.24
 
 
 ## Overview

{rcsb_embedding_model-0.0.22.dist-info → rcsb_embedding_model-0.0.24.dist-info}/RECORD

@@ -2,7 +2,7 @@ rcsb_embedding_model/__init__.py,sha256=r3gLdeBIXkQEQA_K6QcRPO-TtYuAQSutk6pXRUE_
 rcsb_embedding_model/rcsb_structure_embedding.py,sha256=dKp9hXQO0JAnO4SEfjJ_mG_jHu3UxAPguv6jkOjp-BI,4487
 rcsb_embedding_model/cli/args_utils.py,sha256=7nP2q8pL5dWK_U7opxtWmoFcYVwasky6elHk-dASFaI,165
 rcsb_embedding_model/cli/inference.py,sha256=tfMvHAhkUIzJ2RbTtQjq7eWmOUrSyVfH5bjTkCCSIS8,19500
-rcsb_embedding_model/dataset/esm_prot_from_chain.py,sha256=3hWo2nWunFZNTfYCTiPvVoJlkWQbRmvlehFw-6B4z6A,3506
+rcsb_embedding_model/dataset/esm_prot_from_chain.py,sha256=Dh8BVWVT5gdzJKYvQHMEnD8stpMTdvKK1yJVhCBI2bw,3702
 rcsb_embedding_model/dataset/esm_prot_from_structure.py,sha256=TeITPdi1uc3qLQ-Pgn807oH6eM0LYv-67RE50ZT4dLI,2551
 rcsb_embedding_model/dataset/resdiue_assembly_embedding_from_structure.py,sha256=worRiNqOJRjyr693TaillsS65bdTdGOoHfwyT9yE1O4,2866
 rcsb_embedding_model/dataset/residue_assembly_embedding_from_tensor_file.py,sha256=JG4rrhziIUtdTmbuTbMbEYHrvlda4m5VWvdJXe_Sv3c,3449
@@ -23,8 +23,8 @@ rcsb_embedding_model/utils/model.py,sha256=xr3p02ohOgJ5UInwdIupN68Oq4yvNFhxobZRa
 rcsb_embedding_model/utils/structure_parser.py,sha256=IWMQ8brlEMe6_ND-DBESOli8vlqHxladTssjbM9RSKw,2751
 rcsb_embedding_model/utils/structure_provider.py,sha256=eWtxjkPpmRfmil_DKR1J6miaXR3lQ28DF5O0qrqSgGA,786
 rcsb_embedding_model/writer/batch_writer.py,sha256=rTFNasB0Xp4-XCNTXKeEWZxSrb7lvZytoRldJUWn9Jg,3312
-rcsb_embedding_model-0.0.22.dist-info/METADATA,sha256=NK8CDZOJQdk6TCULyjGFODqwRxqCVUPNIUnc9Hhqllg,5310
-rcsb_embedding_model-0.0.22.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
-rcsb_embedding_model-0.0.22.dist-info/entry_points.txt,sha256=MK11jTIEmaV-x4CkPX5IymDaVs7Ky_f2xxU8BJVZ_9Q,69
-rcsb_embedding_model-0.0.22.dist-info/licenses/LICENSE.md,sha256=oUaHiKgfBkChth_Sm67WemEvatO1U0Go8LHjaskXY0w,1522
-rcsb_embedding_model-0.0.22.dist-info/RECORD,,
+rcsb_embedding_model-0.0.24.dist-info/METADATA,sha256=SCMQPP_lMB1_udpJfSCZDl92Pm3GbBhtXpIj5PF8Dok,5310
+rcsb_embedding_model-0.0.24.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
+rcsb_embedding_model-0.0.24.dist-info/entry_points.txt,sha256=MK11jTIEmaV-x4CkPX5IymDaVs7Ky_f2xxU8BJVZ_9Q,69
+rcsb_embedding_model-0.0.24.dist-info/licenses/LICENSE.md,sha256=oUaHiKgfBkChth_Sm67WemEvatO1U0Go8LHjaskXY0w,1522
+rcsb_embedding_model-0.0.24.dist-info/RECORD,,