rc-foundry 0.1.4__py3-none-any.whl → 0.1.5__py3-none-any.whl

foundry/version.py

@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
 commit_id: COMMIT_ID
 __commit_id__: COMMIT_ID
 
-__version__ = version = '0.1.4'
-__version_tuple__ = version_tuple = (0, 1, 4)
+__version__ = version = '0.1.5'
+__version_tuple__ = version_tuple = (0, 1, 5)
 
 __commit_id__ = commit_id = None

{rc_foundry-0.1.4.dist-info → rc_foundry-0.1.5.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: rc-foundry
-Version: 0.1.4
+Version: 0.1.5
 Summary: Shared utilities and training infrastructure for biomolecular structure prediction models.
 Author-email: Institute for Protein Design <contact@ipd.uw.edu>
 License: BSD 3-Clause License

{rc_foundry-0.1.4.dist-info → rc_foundry-0.1.5.dist-info}/RECORD

@@ -1,7 +1,7 @@
 foundry/__init__.py,sha256=H8S1nl5v6YeW8ggn1jKy4GdtH7c-FGS-j7CqUCAEnAU,1926
 foundry/common.py,sha256=Aur8mH-CNmcUqSsw7VgaCQSW5sH1Bqf8Da91jzxPV1Y,3035
 foundry/constants.py,sha256=0n1wBKCvNuw3QaQehSbmsHYkIdaGn3tLeRFItBrdeHY,913
-foundry/version.py,sha256=rLCrf4heo25FJtBY-2Ap7ZuWW-5FS7sqTjsolIUuI5c,704
+foundry/version.py,sha256=rdxBMYpwzYxiWk08QbPLHSAxHoDfeKWwyaJIAM0lSic,704
 foundry/callbacks/__init__.py,sha256=VsRT1e4sqlJHPcTCsfupMEx82Iz-LoOAGPpwvf_OJeE,126
 foundry/callbacks/callback.py,sha256=xZBo_suP4bLrP6gl5uJPbaXm00DXigePa6dMeDxucgg,3890
 foundry/callbacks/health_logging.py,sha256=tEtkByOlaAA7nnelxb7PbM9_dcIgOsdbxCdQY3K5pMc,16664
@@ -120,7 +120,7 @@ rfd3/callbacks.py,sha256=Zjt8RiaYWquoKOwRmC_wCUbRbov-V4zd2_73zjhgDHE,2783
 rfd3/cli.py,sha256=TZpZouXGmwAMFaH8hp4r3q9tbUi1xlcN8n_r8hO2q8c,1424
 rfd3/constants.py,sha256=wLvDzrThpOrK8T3wGFNQeGrhAXOJQze8l3v_7pjIdMM,13141
 rfd3/engine.py,sha256=La_dB48Ewz0IdY1ocxvSWg-PXVAsySm0OGvwyz42lI8,20824
-rfd3/run_inference.py,sha256=dubMwEFkNPOq_yYf0ny37qvvEkRjNNPRFksZgmEFkUc,1520
+rfd3/run_inference.py,sha256=ljzsCKEtrlfAvP0SDFPeQwTM3rV_X3ewHOhcRFVI37c,1258
 rfd3/train.py,sha256=rHswffIUhOae3_iYyvAiQ3jALoFuzrcRUgMlbJLinlI,7947
 rfd3/inference/datasets.py,sha256=u-2U7deHXu-iOs7doiKKynewP-NEyJfdORSTDzUSaQI,6538
 rfd3/inference/input_parsing.py,sha256=mk3HBvo7MPTFEET7NagCo5TSjb47w-hxUDoeQxUW_h4,45449
@@ -173,8 +173,8 @@ rfd3/transforms/virtual_atoms.py,sha256=UpmxzPPd5FaJigcRoxgLSHHrLLOqsCvZ5PPZfQSG
 rfd3/utils/inference.py,sha256=RQp5CCy6Z6uHVZ2Mx0zmmGluYEOrASke4bABtfRjpy0,26448
 rfd3/utils/io.py,sha256=wbdjUTQkDc3RCSM7gdogA-XOKR68HeQ-cfvyN4pP90w,9849
 rfd3/utils/vizualize.py,sha256=HPlczrA3zkOuxV5X05eOvy_Oga9e3cPnFUXOEP4RR_g,11046
-rc_foundry-0.1.4.dist-info/METADATA,sha256=hzcS1buvLzRRAv7rPRgKwYjeNDL_iTGyR6u8CRpL-Ic,10585
-rc_foundry-0.1.4.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
-rc_foundry-0.1.4.dist-info/entry_points.txt,sha256=BmiWCbWGtrd_lSOFMuCLBXyo84B7Nco-alj7hB0Yw9A,130
-rc_foundry-0.1.4.dist-info/licenses/LICENSE.md,sha256=NKtPCJ7QMysFmzeDg56ZfUStvgzbq5sOvRQv7_ddZOs,1533
-rc_foundry-0.1.4.dist-info/RECORD,,
+rc_foundry-0.1.5.dist-info/METADATA,sha256=aUG8GCa8x-SjkduDG2FaLlLx5hT7uZW5qTZuoWv39l0,10585
+rc_foundry-0.1.5.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
+rc_foundry-0.1.5.dist-info/entry_points.txt,sha256=BmiWCbWGtrd_lSOFMuCLBXyo84B7Nco-alj7hB0Yw9A,130
+rc_foundry-0.1.5.dist-info/licenses/LICENSE.md,sha256=NKtPCJ7QMysFmzeDg56ZfUStvgzbq5sOvRQv7_ddZOs,1533
+rc_foundry-0.1.5.dist-info/RECORD,,

rfd3/run_inference.py

@@ -3,20 +3,16 @@
 import os
 
 import hydra
-import rootutils
 from dotenv import load_dotenv
 from omegaconf import DictConfig, OmegaConf
 
 from rfd3.engine import RFD3InferenceConfig, RFD3InferenceEngine
 
-# Setup root dir and environment variables (more info: https://github.com/ashleve/rootutils)
-# NOTE: Sets the `PROJECT_ROOT` environment variable to the root directory of the project (where `.project-root` is located)
-rootutils.setup_root(__file__, indicator=".project-root", pythonpath=True)
-
 load_dotenv(override=True)
 
-# If the user has set `PROJECT_PATH`, use it to build the config path; otherwise, fall back to `PROJECT_ROOT`
-_config_path = os.path.join(os.environ["PROJECT_ROOT"], "models/rfd3/configs")
+# For pip-installed package, configs should be relative to this file
+# Adjust this path based on where configs are bundled in the package
+_config_path = os.path.join(os.path.dirname(os.path.dirname(os.path.dirname(__file__))), "configs")
 
 
 @hydra.main(