rashdf 0.4.0__py3-none-any.whl → 0.5.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- cli.py +49 -6
- rashdf/geom.py +216 -112
- rashdf/plan.py +210 -0
- {rashdf-0.4.0.dist-info → rashdf-0.5.0.dist-info}/METADATA +7 -6
- rashdf-0.5.0.dist-info/RECORD +12 -0
- {rashdf-0.4.0.dist-info → rashdf-0.5.0.dist-info}/WHEEL +1 -1
- rashdf-0.4.0.dist-info/RECORD +0 -12
- {rashdf-0.4.0.dist-info → rashdf-0.5.0.dist-info}/LICENSE +0 -0
- {rashdf-0.4.0.dist-info → rashdf-0.5.0.dist-info}/entry_points.txt +0 -0
- {rashdf-0.4.0.dist-info → rashdf-0.5.0.dist-info}/top_level.txt +0 -0
cli.py
CHANGED
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@@ -3,7 +3,6 @@
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from rashdf import RasGeomHdf, RasPlanHdf
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from rashdf.utils import df_datetimes_to_str
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import fiona
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from geopandas import GeoDataFrame
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import argparse
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@@ -23,6 +22,8 @@ COMMANDS = [
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"refinement_regions",
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"bc_lines",
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"breaklines",
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"reference_lines",
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"reference_points",
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"structures",
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]
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@@ -50,6 +51,20 @@ def docstring_to_help(docstring: Optional[str]) -> str:
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return help_text
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def pyogrio_supported_drivers() -> List[str]:
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"""Return a list of drivers supported by pyogrio for writing output files.
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Returns
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-------
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list
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A list of drivers supported by pyogrio for writing output files.
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"""
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import pyogrio
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drivers = pyogrio.list_drivers(write=True)
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return sorted(drivers)
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def fiona_supported_drivers() -> List[str]:
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"""Return a list of drivers supported by Fiona for writing output files.
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@@ -58,18 +73,34 @@ def fiona_supported_drivers() -> List[str]:
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list
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A list of drivers supported by Fiona for writing output files.
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"""
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import fiona
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drivers = [d for d, s in fiona.supported_drivers.items() if "w" in s]
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return drivers
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return sorted(drivers)
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def parse_args(args: str) -> argparse.Namespace:
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"""Parse command-line arguments."""
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parser = argparse.ArgumentParser(description="Extract data from HEC-RAS HDF files.")
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parser.add_argument(
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"--
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"--pyogrio-drivers",
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action="store_true",
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help="List the drivers supported by
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help="List the drivers supported by pyogrio for writing output files.",
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)
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fiona_installed = False
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engines = ["pyogrio"]
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try:
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import fiona
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fiona_installed = True
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engines.append("fiona")
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parser.add_argument(
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"--fiona-drivers",
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action="store_true",
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help="List the drivers supported by Fiona for writing output files.",
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)
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except ImportError:
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pass
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subparsers = parser.add_subparsers(help="Sub-command help")
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for command in COMMANDS:
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f = getattr(RasGeomHdf, command)
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@@ -91,6 +122,13 @@ def parse_args(args: str) -> argparse.Namespace:
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output_group.add_argument(
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"--feather", action="store_true", help="Output as Feather."
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)
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output_group.add_argument(
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"--engine",
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type=str,
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choices=engines,
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default="pyogrio",
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help="Engine for writing output data.",
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)
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subparser.add_argument(
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"--kwargs",
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type=str,
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@@ -105,7 +143,11 @@ def parse_args(args: str) -> argparse.Namespace:
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def export(args: argparse.Namespace) -> Optional[str]:
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"""Act on parsed arguments to extract data from HEC-RAS HDF files."""
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if args.
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if args.pyogrio_drivers:
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for driver in pyogrio_supported_drivers():
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print(driver)
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return
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if hasattr(args, "fiona_drivers") and args.fiona_drivers:
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for driver in fiona_supported_drivers():
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print(driver)
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return
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@@ -138,6 +180,7 @@ def export(args: argparse.Namespace) -> Optional[str]:
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),
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)
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result = gdf.to_json(**kwargs)
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print("No output file!")
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print(result)
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return result
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elif args.parquet:
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@@ -153,7 +196,7 @@ def export(args: argparse.Namespace) -> Optional[str]:
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# convert any datetime columns to string.
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# TODO: besides Geopackage, which of the standard Fiona drivers allow datetime?
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gdf = df_datetimes_to_str(gdf)
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gdf.to_file(args.output_file, **kwargs)
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gdf.to_file(args.output_file, engine=args.engine, **kwargs)
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def main():
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rashdf/geom.py
CHANGED
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@@ -1,12 +1,13 @@
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"""HEC-RAS Geometry HDF class."""
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from typing import Dict, List, Optional
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import numpy as np
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import pandas as pd
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from geopandas import GeoDataFrame
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from pyproj import CRS
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from shapely import (
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Geometry,
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Polygon,
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Point,
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LineString,
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MultiLineString,
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MultiPolygon,
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@@ -15,6 +16,9 @@ from shapely import (
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polygonize_full,
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)
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from typing import Dict, List, Optional, Union
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from .base import RasHdf
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from .utils import (
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convert_ras_hdf_string,
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@@ -24,12 +28,24 @@ from .utils import (
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)
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class RasGeomHdfError(Exception):
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"""HEC-RAS Plan HDF error class."""
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pass
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class RasGeomHdf(RasHdf):
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"""HEC-RAS Geometry HDF class."""
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GEOM_PATH = "Geometry"
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GEOM_STRUCTURES_PATH = f"{GEOM_PATH}/Structures"
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FLOW_AREA_2D_PATH = f"{GEOM_PATH}/2D Flow Areas"
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BC_LINES_PATH = f"{GEOM_PATH}/Boundary Condition Lines"
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BREAKLINES_PATH = f"{GEOM_PATH}/2D Flow Area Break Lines"
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REFERENCE_LINES_PATH = f"{GEOM_PATH}/Reference Lines"
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REFERENCE_POINTS_PATH = f"{GEOM_PATH}/Reference Points"
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CROSS_SECTIONS = f"{GEOM_PATH}/Cross Sections"
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RIVER_CENTERLINES = f"{GEOM_PATH}/River Centerlines"
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def __init__(self, name: str, **kwargs):
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"""Open a HEC-RAS Geometry HDF file.
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@@ -262,6 +278,38 @@ class RasGeomHdf(RasHdf):
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return d2_flow_area_attrs
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def _get_polylines(
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self,
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path: str,
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info_name: str = "Polyline Info",
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parts_name: str = "Polyline Parts",
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points_name: str = "Polyline Points",
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) -> List[Geometry]:
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polyline_info_path = f"{path}/{info_name}"
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polyline_parts_path = f"{path}/{parts_name}"
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polyline_points_path = f"{path}/{points_name}"
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polyline_info = self[polyline_info_path][()]
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polyline_parts = self[polyline_parts_path][()]
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polyline_points = self[polyline_points_path][()]
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geoms = []
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for pnt_start, pnt_cnt, part_start, part_cnt in polyline_info:
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points = polyline_points[pnt_start : pnt_start + pnt_cnt]
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if part_cnt == 1:
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geoms.append(LineString(points))
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else:
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parts = polyline_parts[part_start : part_start + part_cnt]
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geoms.append(
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MultiLineString(
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list(
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points[part_pnt_start : part_pnt_start + part_pnt_cnt]
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for part_pnt_start, part_pnt_cnt in parts
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)
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)
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)
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return geoms
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def bc_lines(self) -> GeoDataFrame:
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"""Return 2D mesh area boundary condition lines.
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@@ -270,35 +318,15 @@ class RasGeomHdf(RasHdf):
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GeoDataFrame
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A GeoDataFrame containing the 2D mesh area boundary condition lines if they exist.
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"""
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if
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if self.BC_LINES_PATH not in self:
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return GeoDataFrame()
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bc_line_data = self[
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bc_line_data = self[self.BC_LINES_PATH]
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bc_line_ids = range(bc_line_data["Attributes"][()].shape[0])
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v_conv_str = np.vectorize(convert_ras_hdf_string)
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names = v_conv_str(bc_line_data["Attributes"][()]["Name"])
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mesh_names = v_conv_str(bc_line_data["Attributes"][()]["SA-2D"])
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types = v_conv_str(bc_line_data["Attributes"][()]["Type"])
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geoms =
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for pnt_start, pnt_cnt, part_start, part_cnt in bc_line_data["Polyline Info"][
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()
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]:
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points = bc_line_data["Polyline Points"][()][
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pnt_start : pnt_start + pnt_cnt
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]
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if part_cnt == 1:
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geoms.append(LineString(points))
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else:
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parts = bc_line_data["Polyline Parts"][()][
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part_start : part_start + part_cnt
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]
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geoms.append(
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MultiLineString(
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list(
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points[part_pnt_start : part_pnt_start + part_pnt_cnt]
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for part_pnt_start, part_pnt_cnt in parts
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)
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)
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)
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geoms = self._get_polylines(self.BC_LINES_PATH)
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return GeoDataFrame(
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{
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"bc_line_id": bc_line_ids,
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@@ -319,34 +347,14 @@ class RasGeomHdf(RasHdf):
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GeoDataFrame
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A GeoDataFrame containing the 2D mesh area breaklines if they exist.
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"""
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if
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if self.BREAKLINES_PATH not in self:
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return GeoDataFrame()
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bl_line_data = self[
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bl_line_data = self[self.BREAKLINES_PATH]
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bl_line_ids = range(bl_line_data["Attributes"][()].shape[0])
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names = np.vectorize(convert_ras_hdf_string)(
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bl_line_data["Attributes"][()]["Name"]
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)
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geoms =
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for pnt_start, pnt_cnt, part_start, part_cnt in bl_line_data["Polyline Info"][
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()
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]:
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points = bl_line_data["Polyline Points"][()][
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pnt_start : pnt_start + pnt_cnt
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]
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if part_cnt == 1:
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geoms.append(LineString(points))
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else:
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parts = bl_line_data["Polyline Parts"][()][
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part_start : part_start + part_cnt
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]
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geoms.append(
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MultiLineString(
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list(
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points[part_pnt_start : part_pnt_start + part_pnt_cnt]
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for part_pnt_start, part_pnt_cnt in parts
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)
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)
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)
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geoms = self._get_polylines(self.BREAKLINES_PATH)
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return GeoDataFrame(
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{"bl_id": bl_line_ids, "name": names, "geometry": geoms},
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geometry="geometry",
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@@ -400,36 +408,21 @@ class RasGeomHdf(RasHdf):
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GeoDataFrame
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A GeoDataFrame containing the model structures if they exist.
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"""
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if
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if self.GEOM_STRUCTURES_PATH not in self:
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return GeoDataFrame()
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-
struct_data = self[
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struct_data = self[self.GEOM_STRUCTURES_PATH]
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v_conv_val = np.vectorize(convert_ras_hdf_value)
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sd_attrs = struct_data["Attributes"][()]
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struct_dict = {"struct_id": range(sd_attrs.shape[0])}
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struct_dict.update(
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{name: v_conv_val(sd_attrs[name]) for name in sd_attrs.dtype.names}
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)
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geoms =
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-
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]
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if part_cnt == 1:
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geoms.append(LineString(points))
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else:
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parts = struct_data["Centerline Parts"][()][
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part_start : part_start + part_cnt
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]
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|
-
geoms.append(
|
|
426
|
-
MultiLineString(
|
|
427
|
-
list(
|
|
428
|
-
points[part_pnt_start : part_pnt_start + part_pnt_cnt]
|
|
429
|
-
for part_pnt_start, part_pnt_cnt in parts
|
|
430
|
-
)
|
|
431
|
-
)
|
|
432
|
-
)
|
|
420
|
+
geoms = self._get_polylines(
|
|
421
|
+
self.GEOM_STRUCTURES_PATH,
|
|
422
|
+
info_name="Centerline Info",
|
|
423
|
+
parts_name="Centerline Parts",
|
|
424
|
+
points_name="Centerline Points",
|
|
425
|
+
)
|
|
433
426
|
struct_gdf = GeoDataFrame(
|
|
434
427
|
struct_dict,
|
|
435
428
|
geometry=geoms,
|
|
@@ -447,11 +440,153 @@ class RasGeomHdf(RasHdf):
|
|
|
447
440
|
def ic_points(self) -> GeoDataFrame: # noqa D102
|
|
448
441
|
raise NotImplementedError
|
|
449
442
|
|
|
450
|
-
def
|
|
451
|
-
|
|
443
|
+
def _reference_lines_points_names(
|
|
444
|
+
self, reftype: str = "lines", mesh_name: Optional[str] = None
|
|
445
|
+
) -> Union[Dict[str, List[str]], List[str]]:
|
|
446
|
+
"""Return reference line names.
|
|
452
447
|
|
|
453
|
-
|
|
454
|
-
|
|
448
|
+
If a mesh name is provided, return a list of the reference line names for that mesh area.
|
|
449
|
+
If no mesh name is provided, return a dictionary of mesh names and their reference line names.
|
|
450
|
+
|
|
451
|
+
Parameters
|
|
452
|
+
----------
|
|
453
|
+
mesh_name : str, optional
|
|
454
|
+
The name of the mesh area for which to return reference line names.
|
|
455
|
+
|
|
456
|
+
Returns
|
|
457
|
+
-------
|
|
458
|
+
Union[Dict[str, List[str]], List[str]]
|
|
459
|
+
A dictionary of mesh names and their reference line names if mesh_name is None.
|
|
460
|
+
A list of reference line names for the specified mesh area if mesh_name is not None.
|
|
461
|
+
"""
|
|
462
|
+
if reftype == "lines":
|
|
463
|
+
path = self.REFERENCE_LINES_PATH
|
|
464
|
+
sa_2d_field = "SA-2D"
|
|
465
|
+
elif reftype == "points":
|
|
466
|
+
path = self.REFERENCE_POINTS_PATH
|
|
467
|
+
sa_2d_field = "SA/2D"
|
|
468
|
+
else:
|
|
469
|
+
raise RasGeomHdfError(
|
|
470
|
+
f"Invalid reference type: {reftype} -- must be 'lines' or 'points'."
|
|
471
|
+
)
|
|
472
|
+
attributes_path = f"{path}/Attributes"
|
|
473
|
+
if mesh_name is None and attributes_path not in self:
|
|
474
|
+
return {m: [] for m in self.mesh_area_names()}
|
|
475
|
+
if mesh_name is not None and attributes_path not in self:
|
|
476
|
+
return []
|
|
477
|
+
attributes = self[attributes_path][()]
|
|
478
|
+
v_conv_str = np.vectorize(convert_ras_hdf_string)
|
|
479
|
+
names = np.vectorize(convert_ras_hdf_string)(attributes["Name"])
|
|
480
|
+
if mesh_name is not None:
|
|
481
|
+
return names[v_conv_str(attributes[sa_2d_field]) == mesh_name].tolist()
|
|
482
|
+
mesh_names = np.vectorize(convert_ras_hdf_string)(attributes[sa_2d_field])
|
|
483
|
+
return {m: names[mesh_names == m].tolist() for m in np.unique(mesh_names)}
|
|
484
|
+
|
|
485
|
+
def reference_lines_names(
|
|
486
|
+
self, mesh_name: Optional[str] = None
|
|
487
|
+
) -> Union[Dict[str, List[str]], List[str]]:
|
|
488
|
+
"""Return reference line names.
|
|
489
|
+
|
|
490
|
+
If a mesh name is provided, return a list of the reference line names for that mesh area.
|
|
491
|
+
If no mesh name is provided, return a dictionary of mesh names and their reference line names.
|
|
492
|
+
|
|
493
|
+
Parameters
|
|
494
|
+
----------
|
|
495
|
+
mesh_name : str, optional
|
|
496
|
+
The name of the mesh area for which to return reference line names.
|
|
497
|
+
|
|
498
|
+
Returns
|
|
499
|
+
-------
|
|
500
|
+
Union[Dict[str, List[str]], List[str]]
|
|
501
|
+
A dictionary of mesh names and their reference line names if mesh_name is None.
|
|
502
|
+
A list of reference line names for the specified mesh area if mesh_name is not None.
|
|
503
|
+
"""
|
|
504
|
+
return self._reference_lines_points_names("lines", mesh_name)
|
|
505
|
+
|
|
506
|
+
def reference_points_names(
|
|
507
|
+
self, mesh_name: Optional[str] = None
|
|
508
|
+
) -> Union[Dict[str, List[str]], List[str]]:
|
|
509
|
+
"""Return reference point names.
|
|
510
|
+
|
|
511
|
+
If a mesh name is provided, return a list of the reference point names for that mesh area.
|
|
512
|
+
If no mesh name is provided, return a dictionary of mesh names and their reference point names.
|
|
513
|
+
|
|
514
|
+
Parameters
|
|
515
|
+
----------
|
|
516
|
+
mesh_name : str, optional
|
|
517
|
+
The name of the mesh area for which to return reference point names.
|
|
518
|
+
|
|
519
|
+
Returns
|
|
520
|
+
-------
|
|
521
|
+
Union[Dict[str, List[str]], List[str]]
|
|
522
|
+
A dictionary of mesh names and their reference point names if mesh_name is None.
|
|
523
|
+
A list of reference point names for the specified mesh area if mesh_name is not None.
|
|
524
|
+
"""
|
|
525
|
+
return self._reference_lines_points_names("points", mesh_name)
|
|
526
|
+
|
|
527
|
+
def reference_lines(self) -> GeoDataFrame:
|
|
528
|
+
"""Return the reference lines geometry and attributes.
|
|
529
|
+
|
|
530
|
+
Returns
|
|
531
|
+
-------
|
|
532
|
+
GeoDataFrame
|
|
533
|
+
A GeoDataFrame containing the reference lines if they exist.
|
|
534
|
+
"""
|
|
535
|
+
attributes_path = f"{self.REFERENCE_LINES_PATH}/Attributes"
|
|
536
|
+
if attributes_path not in self:
|
|
537
|
+
return GeoDataFrame()
|
|
538
|
+
attributes = self[attributes_path][()]
|
|
539
|
+
refline_ids = range(attributes.shape[0])
|
|
540
|
+
v_conv_str = np.vectorize(convert_ras_hdf_string)
|
|
541
|
+
names = v_conv_str(attributes["Name"])
|
|
542
|
+
mesh_names = v_conv_str(attributes["SA-2D"])
|
|
543
|
+
try:
|
|
544
|
+
types = v_conv_str(attributes["Type"])
|
|
545
|
+
except ValueError:
|
|
546
|
+
# "Type" field doesn't exist -- observed in some RAS HDF files
|
|
547
|
+
types = np.array([""] * attributes.shape[0])
|
|
548
|
+
geoms = self._get_polylines(self.REFERENCE_LINES_PATH)
|
|
549
|
+
return GeoDataFrame(
|
|
550
|
+
{
|
|
551
|
+
"refln_id": refline_ids,
|
|
552
|
+
"refln_name": names,
|
|
553
|
+
"mesh_name": mesh_names,
|
|
554
|
+
"type": types,
|
|
555
|
+
"geometry": geoms,
|
|
556
|
+
},
|
|
557
|
+
geometry="geometry",
|
|
558
|
+
crs=self.projection(),
|
|
559
|
+
)
|
|
560
|
+
|
|
561
|
+
def reference_points(self) -> GeoDataFrame:
|
|
562
|
+
"""Return the reference points geometry and attributes.
|
|
563
|
+
|
|
564
|
+
Returns
|
|
565
|
+
-------
|
|
566
|
+
GeoDataFrame
|
|
567
|
+
A GeoDataFrame containing the reference points if they exist.
|
|
568
|
+
"""
|
|
569
|
+
attributes_path = f"{self.REFERENCE_POINTS_PATH}/Attributes"
|
|
570
|
+
if attributes_path not in self:
|
|
571
|
+
return GeoDataFrame()
|
|
572
|
+
ref_points_group = self[self.REFERENCE_POINTS_PATH]
|
|
573
|
+
attributes = ref_points_group["Attributes"][:]
|
|
574
|
+
v_conv_str = np.vectorize(convert_ras_hdf_string)
|
|
575
|
+
names = v_conv_str(attributes["Name"])
|
|
576
|
+
mesh_names = v_conv_str(attributes["SA/2D"])
|
|
577
|
+
cell_id = attributes["Cell Index"]
|
|
578
|
+
points = ref_points_group["Points"][()]
|
|
579
|
+
return GeoDataFrame(
|
|
580
|
+
{
|
|
581
|
+
"refpt_id": range(attributes.shape[0]),
|
|
582
|
+
"refpt_name": names,
|
|
583
|
+
"mesh_name": mesh_names,
|
|
584
|
+
"cell_id": cell_id,
|
|
585
|
+
"geometry": list(map(Point, points)),
|
|
586
|
+
},
|
|
587
|
+
geometry="geometry",
|
|
588
|
+
crs=self.projection(),
|
|
589
|
+
)
|
|
455
590
|
|
|
456
591
|
def pump_stations(self) -> GeoDataFrame: # noqa D102
|
|
457
592
|
raise NotImplementedError
|
|
@@ -473,33 +608,17 @@ class RasGeomHdf(RasHdf):
|
|
|
473
608
|
GeoDataFrame
|
|
474
609
|
A GeoDataFrame containing the model 1D cross sections if they exist.
|
|
475
610
|
"""
|
|
476
|
-
if
|
|
611
|
+
if self.CROSS_SECTIONS not in self:
|
|
477
612
|
return GeoDataFrame()
|
|
478
613
|
|
|
479
|
-
xs_data = self[
|
|
614
|
+
xs_data = self[self.CROSS_SECTIONS]
|
|
480
615
|
v_conv_val = np.vectorize(convert_ras_hdf_value)
|
|
481
616
|
xs_attrs = xs_data["Attributes"][()]
|
|
482
617
|
xs_dict = {"xs_id": range(xs_attrs.shape[0])}
|
|
483
618
|
xs_dict.update(
|
|
484
619
|
{name: v_conv_val(xs_attrs[name]) for name in xs_attrs.dtype.names}
|
|
485
620
|
)
|
|
486
|
-
geoms =
|
|
487
|
-
for pnt_start, pnt_cnt, part_start, part_cnt in xs_data["Polyline Info"][()]:
|
|
488
|
-
points = xs_data["Polyline Points"][()][pnt_start : pnt_start + pnt_cnt]
|
|
489
|
-
if part_cnt == 1:
|
|
490
|
-
geoms.append(LineString(points))
|
|
491
|
-
else:
|
|
492
|
-
parts = xs_data["Polyline Parts"][()][
|
|
493
|
-
part_start : part_start + part_cnt
|
|
494
|
-
]
|
|
495
|
-
geoms.append(
|
|
496
|
-
MultiLineString(
|
|
497
|
-
list(
|
|
498
|
-
points[part_pnt_start : part_pnt_start + part_pnt_cnt]
|
|
499
|
-
for part_pnt_start, part_pnt_cnt in parts
|
|
500
|
-
)
|
|
501
|
-
)
|
|
502
|
-
)
|
|
621
|
+
geoms = self._get_polylines(self.CROSS_SECTIONS)
|
|
503
622
|
xs_gdf = GeoDataFrame(
|
|
504
623
|
xs_dict,
|
|
505
624
|
geometry=geoms,
|
|
@@ -519,10 +638,10 @@ class RasGeomHdf(RasHdf):
|
|
|
519
638
|
GeoDataFrame
|
|
520
639
|
A GeoDataFrame containing the model 1D river reach lines if they exist.
|
|
521
640
|
"""
|
|
522
|
-
if
|
|
641
|
+
if self.RIVER_CENTERLINES not in self:
|
|
523
642
|
return GeoDataFrame()
|
|
524
643
|
|
|
525
|
-
river_data = self[
|
|
644
|
+
river_data = self[self.RIVER_CENTERLINES]
|
|
526
645
|
v_conv_val = np.vectorize(convert_ras_hdf_value)
|
|
527
646
|
river_attrs = river_data["Attributes"][()]
|
|
528
647
|
river_dict = {"river_id": range(river_attrs.shape[0])}
|
|
@@ -530,22 +649,7 @@ class RasGeomHdf(RasHdf):
|
|
|
530
649
|
{name: v_conv_val(river_attrs[name]) for name in river_attrs.dtype.names}
|
|
531
650
|
)
|
|
532
651
|
geoms = list()
|
|
533
|
-
|
|
534
|
-
points = river_data["Polyline Points"][()][pnt_start : pnt_start + pnt_cnt]
|
|
535
|
-
if part_cnt == 1:
|
|
536
|
-
geoms.append(LineString(points))
|
|
537
|
-
else:
|
|
538
|
-
parts = river_data["Polyline Parts"][()][
|
|
539
|
-
part_start : part_start + part_cnt
|
|
540
|
-
]
|
|
541
|
-
geoms.append(
|
|
542
|
-
MultiLineString(
|
|
543
|
-
list(
|
|
544
|
-
points[part_pnt_start : part_pnt_start + part_pnt_cnt]
|
|
545
|
-
for part_pnt_start, part_pnt_cnt in parts
|
|
546
|
-
)
|
|
547
|
-
)
|
|
548
|
-
)
|
|
652
|
+
geoms = self._get_polylines(self.RIVER_CENTERLINES)
|
|
549
653
|
river_gdf = GeoDataFrame(
|
|
550
654
|
river_dict,
|
|
551
655
|
geometry=geoms,
|
rashdf/plan.py
CHANGED
|
@@ -163,6 +163,8 @@ class RasPlanHdf(RasGeomHdf):
|
|
|
163
163
|
f"{BASE_OUTPUT_PATH}/Summary Output/2D Flow Areas"
|
|
164
164
|
)
|
|
165
165
|
UNSTEADY_TIME_SERIES_PATH = f"{BASE_OUTPUT_PATH}/Unsteady Time Series"
|
|
166
|
+
REFERENCE_LINES_OUTPUT_PATH = f"{UNSTEADY_TIME_SERIES_PATH}/Reference Lines"
|
|
167
|
+
REFERENCE_POINTS_OUTPUT_PATH = f"{UNSTEADY_TIME_SERIES_PATH}/Reference Points"
|
|
166
168
|
|
|
167
169
|
RESULTS_STEADY_PATH = "Results/Steady"
|
|
168
170
|
BASE_STEADY_PATH = f"{RESULTS_STEADY_PATH}/Output/Output Blocks/Base Output"
|
|
@@ -921,6 +923,214 @@ class RasPlanHdf(RasGeomHdf):
|
|
|
921
923
|
ds = self._mesh_timeseries_outputs(mesh_name, TIME_SERIES_OUTPUT_VARS_FACES)
|
|
922
924
|
return ds
|
|
923
925
|
|
|
926
|
+
def reference_timeseries_output(self, reftype: str = "lines") -> xr.Dataset:
|
|
927
|
+
"""Return timeseries output data for reference lines or points from a HEC-RAS HDF plan file.
|
|
928
|
+
|
|
929
|
+
Parameters
|
|
930
|
+
----------
|
|
931
|
+
reftype : str, optional
|
|
932
|
+
The type of reference data to retrieve. Must be either "lines" or "points".
|
|
933
|
+
(default: "lines")
|
|
934
|
+
|
|
935
|
+
Returns
|
|
936
|
+
-------
|
|
937
|
+
xr.Dataset
|
|
938
|
+
An xarray Dataset with reference line timeseries data.
|
|
939
|
+
"""
|
|
940
|
+
if reftype == "lines":
|
|
941
|
+
output_path = self.REFERENCE_LINES_OUTPUT_PATH
|
|
942
|
+
abbrev = "refln"
|
|
943
|
+
elif reftype == "points":
|
|
944
|
+
output_path = self.REFERENCE_POINTS_OUTPUT_PATH
|
|
945
|
+
abbrev = "refpt"
|
|
946
|
+
else:
|
|
947
|
+
raise ValueError('reftype must be either "lines" or "points".')
|
|
948
|
+
reference_group = self.get(output_path)
|
|
949
|
+
if reference_group is None:
|
|
950
|
+
raise RasPlanHdfError(
|
|
951
|
+
f"Could not find HDF group at path '{output_path}'."
|
|
952
|
+
f" Does the Plan HDF file contain reference {reftype[:-1]} output data?"
|
|
953
|
+
)
|
|
954
|
+
reference_names = reference_group["Name"][:]
|
|
955
|
+
names = []
|
|
956
|
+
mesh_areas = []
|
|
957
|
+
for s in reference_names:
|
|
958
|
+
name, mesh_area = s.decode("utf-8").split("|")
|
|
959
|
+
names.append(name)
|
|
960
|
+
mesh_areas.append(mesh_area)
|
|
961
|
+
|
|
962
|
+
times = self.unsteady_datetimes()
|
|
963
|
+
|
|
964
|
+
das = {}
|
|
965
|
+
for var in ["Flow", "Velocity", "Water Surface"]:
|
|
966
|
+
group = reference_group.get(var)
|
|
967
|
+
if group is None:
|
|
968
|
+
continue
|
|
969
|
+
try:
|
|
970
|
+
import dask.array as da
|
|
971
|
+
|
|
972
|
+
# TODO: user-specified chunks?
|
|
973
|
+
values = da.from_array(group, chunks=group.chunks)
|
|
974
|
+
except ImportError:
|
|
975
|
+
values = group[:]
|
|
976
|
+
units = group.attrs["Units"].decode("utf-8")
|
|
977
|
+
da = xr.DataArray(
|
|
978
|
+
values,
|
|
979
|
+
name=var,
|
|
980
|
+
dims=["time", f"{abbrev}_id"],
|
|
981
|
+
coords={
|
|
982
|
+
"time": times,
|
|
983
|
+
f"{abbrev}_id": range(values.shape[1]),
|
|
984
|
+
f"{abbrev}_name": (f"{abbrev}_id", names),
|
|
985
|
+
"mesh_name": (f"{abbrev}_id", mesh_areas),
|
|
986
|
+
},
|
|
987
|
+
attrs={"Units": units},
|
|
988
|
+
)
|
|
989
|
+
das[var] = da
|
|
990
|
+
return xr.Dataset(das)
|
|
991
|
+
|
|
992
|
+
def reference_lines_timeseries_output(self) -> xr.Dataset:
|
|
993
|
+
"""Return timeseries output data for reference lines from a HEC-RAS HDF plan file.
|
|
994
|
+
|
|
995
|
+
Returns
|
|
996
|
+
-------
|
|
997
|
+
xr.Dataset
|
|
998
|
+
An xarray Dataset with timeseries output data for reference lines.
|
|
999
|
+
"""
|
|
1000
|
+
return self.reference_timeseries_output(reftype="lines")
|
|
1001
|
+
|
|
1002
|
+
def reference_points_timeseries_output(self) -> xr.Dataset:
|
|
1003
|
+
"""Return timeseries output data for reference points from a HEC-RAS HDF plan file.
|
|
1004
|
+
|
|
1005
|
+
Returns
|
|
1006
|
+
-------
|
|
1007
|
+
xr.Dataset
|
|
1008
|
+
An xarray Dataset with timeseries output data for reference points.
|
|
1009
|
+
"""
|
|
1010
|
+
return self.reference_timeseries_output(reftype="points")
|
|
1011
|
+
|
|
1012
|
+
def reference_summary_output(self, reftype: str = "lines") -> DataFrame:
|
|
1013
|
+
"""Return summary output data for reference lines or points from a HEC-RAS HDF plan file.
|
|
1014
|
+
|
|
1015
|
+
Returns
|
|
1016
|
+
-------
|
|
1017
|
+
DataFrame
|
|
1018
|
+
A DataFrame with reference line summary output data.
|
|
1019
|
+
"""
|
|
1020
|
+
if reftype == "lines":
|
|
1021
|
+
abbrev = "refln"
|
|
1022
|
+
elif reftype == "points":
|
|
1023
|
+
abbrev = "refpt"
|
|
1024
|
+
else:
|
|
1025
|
+
raise ValueError('reftype must be either "lines" or "points".')
|
|
1026
|
+
ds = self.reference_timeseries_output(reftype=reftype)
|
|
1027
|
+
result = {
|
|
1028
|
+
f"{abbrev}_id": ds[f"{abbrev}_id"],
|
|
1029
|
+
f"{abbrev}_name": ds[f"{abbrev}_name"],
|
|
1030
|
+
"mesh_name": ds.mesh_name,
|
|
1031
|
+
}
|
|
1032
|
+
vars = {
|
|
1033
|
+
"Flow": "q",
|
|
1034
|
+
"Water Surface": "ws",
|
|
1035
|
+
"Velocity": "v",
|
|
1036
|
+
}
|
|
1037
|
+
for var, abbrev in vars.items():
|
|
1038
|
+
if var not in ds:
|
|
1039
|
+
continue
|
|
1040
|
+
max_var = ds[var].max(dim="time")
|
|
1041
|
+
max_time = ds[var].time[ds[var].argmax(dim="time")]
|
|
1042
|
+
min_var = ds[var].min(dim="time")
|
|
1043
|
+
min_time = ds[var].time[ds[var].argmin(dim="time")]
|
|
1044
|
+
result[f"max_{abbrev}"] = max_var
|
|
1045
|
+
result[f"max_{abbrev}_time"] = max_time
|
|
1046
|
+
result[f"min_{abbrev}"] = min_var
|
|
1047
|
+
result[f"min_{abbrev}_time"] = min_time
|
|
1048
|
+
return DataFrame(result)
|
|
1049
|
+
|
|
1050
|
+
def _reference_lines_points(
|
|
1051
|
+
self,
|
|
1052
|
+
reftype: str = "lines",
|
|
1053
|
+
include_output: bool = True,
|
|
1054
|
+
datetime_to_str: bool = False,
|
|
1055
|
+
) -> GeoDataFrame:
|
|
1056
|
+
if reftype == "lines":
|
|
1057
|
+
abbrev = "refln"
|
|
1058
|
+
gdf = super().reference_lines()
|
|
1059
|
+
elif reftype == "points":
|
|
1060
|
+
abbrev = "refpt"
|
|
1061
|
+
gdf = super().reference_points()
|
|
1062
|
+
else:
|
|
1063
|
+
raise ValueError('reftype must be either "lines" or "points".')
|
|
1064
|
+
if include_output is False:
|
|
1065
|
+
return gdf
|
|
1066
|
+
summary_output = self.reference_summary_output(reftype=reftype)
|
|
1067
|
+
gdf = gdf.merge(
|
|
1068
|
+
summary_output,
|
|
1069
|
+
on=[f"{abbrev}_id", f"{abbrev}_name", "mesh_name"],
|
|
1070
|
+
how="left",
|
|
1071
|
+
)
|
|
1072
|
+
if datetime_to_str:
|
|
1073
|
+
gdf = df_datetimes_to_str(gdf)
|
|
1074
|
+
return gdf
|
|
1075
|
+
|
|
1076
|
+
def reference_lines(
|
|
1077
|
+
self, include_output: bool = True, datetime_to_str: bool = False
|
|
1078
|
+
) -> GeoDataFrame:
|
|
1079
|
+
"""Return the reference lines from a HEC-RAS HDF plan file.
|
|
1080
|
+
|
|
1081
|
+
Includes summary output data for each reference line:
|
|
1082
|
+
- Maximum flow & time (max_q, max_q_time)
|
|
1083
|
+
- Minimum flow & time (min_q, min_q_time)
|
|
1084
|
+
- Maximum water surface elevation & time (max_ws, max_ws_time)
|
|
1085
|
+
- Minimum water surface elevation & time (min_ws, min_ws_time)
|
|
1086
|
+
|
|
1087
|
+
Parameters
|
|
1088
|
+
----------
|
|
1089
|
+
include_output : bool, optional
|
|
1090
|
+
If True, include summary output data in the GeoDataFrame. (default: True)
|
|
1091
|
+
datetime_to_str : bool, optional
|
|
1092
|
+
If True, convert datetime columns to strings. (default: False)
|
|
1093
|
+
|
|
1094
|
+
Returns
|
|
1095
|
+
-------
|
|
1096
|
+
GeoDataFrame
|
|
1097
|
+
A GeoDataFrame with reference line geometry and summary output data.
|
|
1098
|
+
"""
|
|
1099
|
+
return self._reference_lines_points(
|
|
1100
|
+
reftype="lines",
|
|
1101
|
+
include_output=include_output,
|
|
1102
|
+
datetime_to_str=datetime_to_str,
|
|
1103
|
+
)
|
|
1104
|
+
|
|
1105
|
+
def reference_points(
|
|
1106
|
+
self, include_output: bool = True, datetime_to_str: bool = False
|
|
1107
|
+
) -> GeoDataFrame:
|
|
1108
|
+
"""Return the reference points from a HEC-RAS HDF plan file.
|
|
1109
|
+
|
|
1110
|
+
Parameters
|
|
1111
|
+
----------
|
|
1112
|
+
include_output : bool, optional
|
|
1113
|
+
If True, include summary output data in the GeoDataFrame. (default: True)
|
|
1114
|
+
datetime_to_str : bool, optional
|
|
1115
|
+
If True, convert datetime columns to strings. (default: False)
|
|
1116
|
+
|
|
1117
|
+
Includes summary output data for each reference point:
|
|
1118
|
+
- Maximum flow & time (max_q, max_q_time)
|
|
1119
|
+
- Minimum flow & time (min_q, min_q_time)
|
|
1120
|
+
- Maximum water surface elevation & time (max_ws, max_ws_time)
|
|
1121
|
+
- Minimum water surface elevation & time (min_ws, min_ws_time)
|
|
1122
|
+
|
|
1123
|
+
Returns
|
|
1124
|
+
-------
|
|
1125
|
+
GeoDataFrame
|
|
1126
|
+
A GeoDataFrame with reference point geometry and summary output data.
|
|
1127
|
+
"""
|
|
1128
|
+
return self._reference_lines_points(
|
|
1129
|
+
reftype="points",
|
|
1130
|
+
include_output=include_output,
|
|
1131
|
+
datetime_to_str=datetime_to_str,
|
|
1132
|
+
)
|
|
1133
|
+
|
|
924
1134
|
def get_plan_info_attrs(self) -> Dict:
|
|
925
1135
|
"""Return plan information attributes from a HEC-RAS HDF plan file.
|
|
926
1136
|
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.1
|
|
2
2
|
Name: rashdf
|
|
3
|
-
Version: 0.
|
|
3
|
+
Version: 0.5.0
|
|
4
4
|
Summary: Read data from HEC-RAS HDF files.
|
|
5
5
|
Project-URL: repository, https://github.com/fema-ffrd/rashdf
|
|
6
6
|
Classifier: Development Status :: 4 - Beta
|
|
@@ -14,7 +14,7 @@ Classifier: Programming Language :: Python :: 3.12
|
|
|
14
14
|
Description-Content-Type: text/markdown
|
|
15
15
|
License-File: LICENSE
|
|
16
16
|
Requires-Dist: h5py
|
|
17
|
-
Requires-Dist: geopandas <0.
|
|
17
|
+
Requires-Dist: geopandas <2.0,>=1.0
|
|
18
18
|
Requires-Dist: pyarrow
|
|
19
19
|
Requires-Dist: xarray
|
|
20
20
|
Provides-Extra: dev
|
|
@@ -22,6 +22,7 @@ Requires-Dist: pre-commit ; extra == 'dev'
|
|
|
22
22
|
Requires-Dist: ruff ; extra == 'dev'
|
|
23
23
|
Requires-Dist: pytest ; extra == 'dev'
|
|
24
24
|
Requires-Dist: pytest-cov ; extra == 'dev'
|
|
25
|
+
Requires-Dist: fiona ; extra == 'dev'
|
|
25
26
|
Provides-Extra: docs
|
|
26
27
|
Requires-Dist: sphinx ; extra == 'docs'
|
|
27
28
|
Requires-Dist: numpydoc ; extra == 'docs'
|
|
@@ -76,8 +77,8 @@ Also, methods to extract certain HDF group attributes as dictionaries:
|
|
|
76
77
|
```python
|
|
77
78
|
>>> from rashdf import RasPlanHdf
|
|
78
79
|
>>> with RasPlanHdf("path/to/rasmodel/Muncie.p04.hdf") as plan_hdf:
|
|
79
|
-
>>>
|
|
80
|
-
>>>
|
|
80
|
+
>>> results_unsteady_summary_attrs = plan_hdf.get_results_unsteady_summary_attrs()
|
|
81
|
+
>>> results_unsteady_summary_attrs
|
|
81
82
|
{'Computation Time DSS': datetime.timedelta(0),
|
|
82
83
|
'Computation Time Total': datetime.timedelta(seconds=23),
|
|
83
84
|
'Maximum WSEL Error': 0.0099277812987566,
|
|
@@ -101,9 +102,9 @@ CLI help:
|
|
|
101
102
|
$ rashdf --help
|
|
102
103
|
```
|
|
103
104
|
|
|
104
|
-
Print the output formats supported by
|
|
105
|
+
Print the output formats supported by pyorgio:
|
|
105
106
|
```
|
|
106
|
-
$ rashdf --
|
|
107
|
+
$ rashdf --pyogrio-drivers
|
|
107
108
|
```
|
|
108
109
|
|
|
109
110
|
Help for a specific subcommand:
|
|
@@ -0,0 +1,12 @@
|
|
|
1
|
+
cli.py,sha256=yItWmCxnYLcuOpJVRpUsfv_NLS9IxLjojZB9GrxfKAU,6571
|
|
2
|
+
rashdf/__init__.py,sha256=XXFtJDgLPCimqAhfsFz_pTWYECJiRT0i-Kb1uflXmVU,156
|
|
3
|
+
rashdf/base.py,sha256=lHYVDwFTA1qFI34QYZ55QKcp7b8CeZsmDfESdkYISbg,2432
|
|
4
|
+
rashdf/geom.py,sha256=2aTfj6mqZGP6rysflQ5L8FeItlYJsknO00sKHo-yaTw,26090
|
|
5
|
+
rashdf/plan.py,sha256=ggXzP4Ryx9MxMSHFrkMpFIjYCdIBufWiFPsFx5SFY6c,47426
|
|
6
|
+
rashdf/utils.py,sha256=93arHtIT-iL9dIpbYr7esjrxv1uJabTRJSruyjvr8mw,10168
|
|
7
|
+
rashdf-0.5.0.dist-info/LICENSE,sha256=L_0QaLpQVHPcglVjiaJPnOocwzP8uXevDRjUPr9DL1Y,1065
|
|
8
|
+
rashdf-0.5.0.dist-info/METADATA,sha256=hnF7VT4q5-tBkwMZQvF1VfGArEQ4y1jznn1A4L0PwGs,5729
|
|
9
|
+
rashdf-0.5.0.dist-info/WHEEL,sha256=Z4pYXqR_rTB7OWNDYFOm1qRk0RX6GFP2o8LgvP453Hk,91
|
|
10
|
+
rashdf-0.5.0.dist-info/entry_points.txt,sha256=LHHMR1lLy4wRyscMuW1RlYDXemtPgqQhNcILz0DtStY,36
|
|
11
|
+
rashdf-0.5.0.dist-info/top_level.txt,sha256=SrmLb6FFTJtM_t6O1v0M0JePshiQJMHr0yYVkHL7ztk,11
|
|
12
|
+
rashdf-0.5.0.dist-info/RECORD,,
|
rashdf-0.4.0.dist-info/RECORD
DELETED
|
@@ -1,12 +0,0 @@
|
|
|
1
|
-
cli.py,sha256=dnTMEBid99xqorBFKZnUwOTDyTmIg08D83bSCkJ6104,5389
|
|
2
|
-
rashdf/__init__.py,sha256=XXFtJDgLPCimqAhfsFz_pTWYECJiRT0i-Kb1uflXmVU,156
|
|
3
|
-
rashdf/base.py,sha256=lHYVDwFTA1qFI34QYZ55QKcp7b8CeZsmDfESdkYISbg,2432
|
|
4
|
-
rashdf/geom.py,sha256=z3ak4TYjYo8-jrIQNSU96S7ulX5xk67rFZ5J0Y9yKbI,22048
|
|
5
|
-
rashdf/plan.py,sha256=YfJdjzZmGA9X8QnUflkc-8DMzMGoW5Gda3lRgMfxeQc,39669
|
|
6
|
-
rashdf/utils.py,sha256=93arHtIT-iL9dIpbYr7esjrxv1uJabTRJSruyjvr8mw,10168
|
|
7
|
-
rashdf-0.4.0.dist-info/LICENSE,sha256=L_0QaLpQVHPcglVjiaJPnOocwzP8uXevDRjUPr9DL1Y,1065
|
|
8
|
-
rashdf-0.4.0.dist-info/METADATA,sha256=x7h2Pvw_xTQmzOhJKWkj6-R1lzCp_gDBt1wIkBikTZQ,5671
|
|
9
|
-
rashdf-0.4.0.dist-info/WHEEL,sha256=cpQTJ5IWu9CdaPViMhC9YzF8gZuS5-vlfoFihTBC86A,91
|
|
10
|
-
rashdf-0.4.0.dist-info/entry_points.txt,sha256=LHHMR1lLy4wRyscMuW1RlYDXemtPgqQhNcILz0DtStY,36
|
|
11
|
-
rashdf-0.4.0.dist-info/top_level.txt,sha256=SrmLb6FFTJtM_t6O1v0M0JePshiQJMHr0yYVkHL7ztk,11
|
|
12
|
-
rashdf-0.4.0.dist-info/RECORD,,
|
|
File without changes
|
|
File without changes
|
|
File without changes
|