rapidtide 3.1.3__py3-none-any.whl → 3.1.4__py3-none-any.whl

rapidtide/OrthoImageItem.py

@@ -19,6 +19,7 @@
 """
 A widget for orthographically displaying 3 and 4 dimensional data
 """
+
 import os
 from typing import Any
 

rapidtide/_version.py

@@ -8,11 +8,11 @@ import json
 
 version_json = '''
 {
- "date": "2026-01-21T11:49:41-0500",
+ "date": "2026-02-04T10:41:13-0500",
  "dirty": false,
  "error": null,
- "full-revisionid": "63ac9a63f9549380f07bf90d8c5f0d80db38bb53",
- "version": "3.1.3"
+ "full-revisionid": "a9659df53b25bd79da32ef7d9377c0396b03983b",
+ "version": "3.1.4"
 }
 '''  # END VERSION_JSON
 

rapidtide/calccoherence.py

@@ -89,7 +89,7 @@ def _procOneVoxelCoherence(
     options.update(kwargs)
     alt = options["alt"]
     debug = options["debug"]
-    (theCoherer, fmritc) = voxelargs
+    theCoherer, fmritc = voxelargs
     if debug:
         print(f"{alt=}")
     if alt:

rapidtide/calcsimfunc.py

@@ -109,7 +109,7 @@ def _procOneVoxelCorrelation(
     debug = options["debug"]
     if debug:
         print(f"{oversampfactor=} {interptype=}")
-    (thetc, theCorrelator, fmri_x, fmritc, os_fmri_x, theglobalmaxlist, thexcorr_y) = voxelargs
+    thetc, theCorrelator, fmri_x, fmritc, os_fmri_x, theglobalmaxlist, thexcorr_y = voxelargs
     if oversampfactor >= 1:
         thetc[:] = tide_resample.doresample(fmri_x, fmritc, os_fmri_x, method=interptype)
     else:

rapidtide/correlate.py

@@ -17,6 +17,7 @@
 #
 #
 """Functions for calculating correlations and similar metrics between arrays."""
+
 import logging
 import warnings
 from typing import Any, Callable, Optional, Tuple, Union

rapidtide/data/examples/src/testhappy

@@ -90,7 +90,15 @@
 happy \
     sub-HAPPYTEST.nii.gz \
     sub-HAPPYTEST.json \
-    ../dst/happy_attention \
+    ../dst/happy_temporal \
+    --temporalregression \
+    --nprocs -1
+
+happy \
+    sub-HAPPYTEST.nii.gz \
+    sub-HAPPYTEST.json \
+    ../dst/happy_spatial \
+    --spatialregression \
     --nprocs -1
 
 #happy \

rapidtide/happy_supportfuncs.py

@@ -3183,7 +3183,7 @@ def _procOneSliceSmoothing(slice, sliceargs, **kwargs):
     }
     options.update(kwargs)
     debug = options["debug"]
-    (validlocslist, rawapp_byslice, appsmoothingfilter, phaseFs, derivatives_byslice) = sliceargs
+    validlocslist, rawapp_byslice, appsmoothingfilter, phaseFs, derivatives_byslice = sliceargs
     # now smooth the projected data along the time dimension
     validlocs = validlocslist[slice]
     if len(validlocs) > 0:

rapidtide/linfitfiltpass.py

@@ -144,6 +144,7 @@ def linfitfiltpass(
     datatoremove: NDArray | None,
     filtereddata: NDArray | None,
     nprocs: int = 1,
+    validmask: NDArray = None,
     alwaysmultiproc: bool = False,
     constantevs: bool = False,
     confoundregress: bool = False,
@@ -260,19 +261,23 @@ def linfitfiltpass(
     else:
         indexaxis = 1
         procunit = "timepoints"
-    if threshval is None:
-        themask = None
-    else:
-        if procbyvoxel:
-            meanim = np.mean(fmri_data, axis=1)
-            stdim = np.std(fmri_data, axis=1)
-        else:
-            meanim = np.mean(fmri_data, axis=0)
-            stdim = np.std(fmri_data, axis=0)
-        if np.mean(stdim) < np.mean(meanim):
-            themask = np.where(meanim > threshval, 1, 0)
+    if validmask is None:
+        if threshval is None:
+            themask = None
         else:
-            themask = np.where(stdim > threshval, 1, 0)
+            if procbyvoxel:
+                meanim = np.mean(fmri_data, axis=1)
+                stdim = np.std(fmri_data, axis=1)
+            else:
+                meanim = np.mean(fmri_data, axis=0)
+                stdim = np.std(fmri_data, axis=0)
+            if np.mean(stdim) < np.mean(meanim):
+                themask = np.where(meanim > threshval, 1, 0)
+            else:
+                themask = np.where(stdim > threshval, 1, 0)
+    else:
+        themask = validmask
+
     if (
         nprocs > 1 or alwaysmultiproc
     ):  # temporary workaround until I figure out why nprocs > 1 is failing
@@ -365,6 +370,7 @@ def linfitfiltpass(
                     itemstotal += 1
             else:
                 for voxel in data_out:
+
                     meanvalue[voxel[0]] = voxel[1]
                     rvalue[voxel[0]] = voxel[2]
                     r2value[voxel[0]] = voxel[3]
@@ -567,6 +573,11 @@ def linfitfiltpass(
                     itemstotal += 1
         if showprogressbar:
             print()
+    if debug:
+        print("At end of linfitfiltpass:")
+        print(f"\t{datatoremove.shape=}, {np.min(datatoremove)=}, {np.max(datatoremove)=}")
+        print(f"\t{filtereddata.shape=}, {np.min(filtereddata)=}, {np.max(filtereddata)=}")
+        print(f"\t{fitcoeff.shape=}, {np.min(fitcoeff)=}, {np.max(fitcoeff)=}")
     return itemstotal
 
 

rapidtide/makelaggedtcs.py

@@ -88,7 +88,7 @@ def _procOneVoxelMakelagtc(
     options.update(kwargs)
     rt_floattype = options["rt_floattype"]
     debug = options["debug"]
-    (lagtcgenerator, thelag, timeaxis) = voxelargs
+    lagtcgenerator, thelag, timeaxis = voxelargs
     if debug:
         print(f"{vox=}, {thelag=}, {timeaxis=}")
 

rapidtide/workflows/calctexticc.py

@@ -371,7 +371,7 @@ def calctexticc(args: Any) -> None:
     measlist = tide_io.readvecs(args.measurementlist, thedtype=str)
 
     print(f"measurementlist shape: {measlist.shape}")
-    (nummeas, numsubjs) = measlist.shape[0], measlist.shape[1]
+    nummeas, numsubjs = measlist.shape[0], measlist.shape[1]
 
     print(f"numsubjs: {numsubjs}, nummeas: {nummeas}")
 

rapidtide/workflows/delayvar.py

@@ -893,7 +893,7 @@ def delayvar(args: Any) -> None:
                 f"calculating delayoffsets for {windowedfilteredregressderivratios.shape[0]} voxels"
             )
         for i in range(windowedfilteredregressderivratios.shape[0]):
-            (windoweddelayoffset[i, thewin], windowedclosestoffset[i, thewin]) = (
+            windoweddelayoffset[i, thewin], windowedclosestoffset[i, thewin] = (
                 tide_refinedelay.ratiotodelay(
                     windowedfilteredregressderivratios[i, thewin],
                     offset=lagstouse_valid[i],

rapidtide/workflows/happy.py

@@ -230,10 +230,10 @@ def happy_main(argparsingfunc: Any) -> None:
     }
 
     # decide if we need to use shared memory
-    if args.nprocs > 1:
-        infodict["sharedmem"] = True
-    else:
+    if args.nprocs == 1:
         infodict["sharedmem"] = False
+    else:
+        infodict["sharedmem"] = True
 
     # save the information file
     if args.saveinfoasjson:
@@ -356,7 +356,7 @@ def happy_main(argparsingfunc: Any) -> None:
             order=args.motfilt_order,
         )
         tide_util.disablemkl(args.nprocs)
-        (motionregressors, motionregressorlabels, filtereddata, confoundr2) = (
+        motionregressors, motionregressorlabels, filtereddata, confoundr2 = (
             tide_linfitfiltpass.confoundregress(
                 confoundregressors,
                 confoundregressorlabels,
@@ -2383,26 +2383,53 @@ def happy_main(argparsingfunc: Any) -> None:
             tide_util.disablemkl(args.nprocs)
             tide_linfitfiltpass.linfitfiltpass(
                 timepoints,
-                fmri_data[validlocs, :],
+                fmri_data - (np.mean(fmri_data, axis=1))[:, None],
                 threshval,
-                cardiacnoise[validlocs, :],
+                cardiacnoise,
                 meanvals,
                 rvals,
                 r2vals,
                 fitcoffs,
                 fitNorm,
-                datatoremove[validlocs, :],
-                filtereddata[validlocs, :],
+                datatoremove,
+                filtereddata,
                 chunksize=10,
                 procbyvoxel=False,
                 nprocs=args.nprocs,
             )
             tide_util.enablemkl(args.mklthreads)
-            datatoremove[validlocs, :] = np.multiply(cardiacnoise[validlocs, :], fitcoffs[None, :])
-            print(f"{datatoremove.shape=}, {np.min(datatoremove)=}, {np.max(datatoremove)=}")
-            print(f"{cardiacnoise.shape=}, {np.min(cardiacnoise)=}, {np.max(cardiacnoise)=}")
-            print(f"{fitcoffs.shape=}, {np.min(fitcoffs)=}, {np.max(fitcoffs)=}")
-            filtereddata = fmri_data - datatoremove
+            # we have to do this because we demeaned the data to get a valid R2
+            filtereddata[validlocs, :] = fmri_data[validlocs, :] - datatoremove[validlocs, :]
+            if args.focaldebug:
+                print("After returning from linfitfiltpass:")
+                print(f"\t{infodict['sharedmem']=}")
+                print(f"\t{datatoremove.shape=}, {np.min(datatoremove)=}, {np.max(datatoremove)=}")
+                print(f"\t{cardiacnoise.shape=}, {np.min(cardiacnoise)=}, {np.max(cardiacnoise)=}")
+                print(f"\t{fitcoffs.shape=}, {np.min(fitcoffs)=}, {np.max(fitcoffs)=}")
+            tide_io.writebidstsv(
+                outputroot + "_desc-cardfilterCoeffs_timeseries",
+                fitcoffs,
+                mrsamplerate,
+                columns=["fitcoeffs"],
+                append=False,
+                debug=args.debug,
+            )
+            tide_io.writebidstsv(
+                outputroot + "_desc-cardfilterR_timeseries",
+                rvals,
+                mrsamplerate,
+                columns=["R"],
+                append=False,
+                debug=args.debug,
+            )
+            tide_io.writebidstsv(
+                outputroot + "_desc-cardfilterR2_timeseries",
+                r2vals,
+                mrsamplerate,
+                columns=["R2"],
+                append=False,
+                debug=args.debug,
+            )
             timings.append(
                 [
                     "Cardiac signal spatial regression finished",
@@ -2447,29 +2474,28 @@ def happy_main(argparsingfunc: Any) -> None:
             print("Running temporal regression on", numvalidspatiallocs, "voxels")
             tide_util.disablemkl(args.nprocs)
             tide_linfitfiltpass.linfitfiltpass(
-                numvalidspatiallocs,
-                fmri_data[validlocs, :],
+                numspatiallocs,
+                fmri_data,
                 threshval,
-                cardiacnoise[validlocs, :],
-                meanvals[validlocs],
-                rvals[validlocs],
-                r2vals[validlocs],
-                fitcoffs[validlocs],
-                fitNorm[validlocs],
-                datatoremove[validlocs, :],
-                filtereddata[validlocs, :],
+                cardiacnoise,
+                meanvals,
+                rvals,
+                r2vals,
+                fitcoffs,
+                fitNorm,
+                datatoremove,
+                filtereddata,
+                validmask=projmask.reshape(xsize * ysize * numslices),
                 procbyvoxel=True,
                 nprocs=args.nprocs,
                 debug=args.focaldebug,
             )
             tide_util.enablemkl(args.mklthreads)
-            datatoremove[validlocs, :] = np.multiply(
-                cardiacnoise[validlocs, :], fitcoffs[validlocs, None]
-            )
-            print(f"{datatoremove.shape=}, {np.min(datatoremove)=}, {np.max(datatoremove)=}")
-            print(f"{cardiacnoise.shape=}, {np.min(cardiacnoise)=}, {np.max(cardiacnoise)=}")
-            print(f"{fitcoffs.shape=}, {np.min(fitcoffs)=}, {np.max(fitcoffs)=}")
-            filtereddata[validlocs, :] = fmri_data[validlocs, :] - datatoremove[validlocs, :]
+            if args.focaldebug:
+                print("After returning from linfitfiltpass:")
+                print(f"\t{datatoremove.shape=}, {np.min(datatoremove)=}, {np.max(datatoremove)=}")
+                print(f"\t{cardiacnoise.shape=}, {np.min(cardiacnoise)=}, {np.max(cardiacnoise)=}")
+                print(f"\t{fitcoffs.shape=}, {np.min(fitcoffs)=}, {np.max(fitcoffs)=}")            #filtereddata[validlocs, :] = fmri_data[validlocs, :] - datatoremove[validlocs, :]
             timings.append(
                 [
                     "Cardiac signal temporal regression finished",
@@ -2482,25 +2508,32 @@ def happy_main(argparsingfunc: Any) -> None:
             maplist = [
                 (
                     fitcoffs.reshape((xsize, ysize, numslices)),
-                    "cardfiltCoeffs",
+                    "cardfilterCoeffs",
                     "map",
                     None,
                     "Coefficients for temporal cardiac noise regression",
                 ),
                 (
                     meanvals.reshape((xsize, ysize, numslices)),
-                    "cardfiltMean",
+                    "cardfilterMean",
                     "map",
                     None,
                     "Mean values after temporal cardiac noise regression",
                 ),
                 (
                     rvals.reshape((xsize, ysize, numslices)),
-                    "cardfiltR",
+                    "cardfilterR",
                     "map",
                     None,
                     "R values for temporal cardiac noise regression",
                 ),
+                (
+                    r2vals.reshape((xsize, ysize, numslices)),
+                    "cardfilterR2",
+                    "map",
+                    None,
+                    "R2 values for temporal cardiac noise regression",
+                ),
             ]
             tide_io.savemaplist(
                 outputroot,
@@ -2517,14 +2550,14 @@ def happy_main(argparsingfunc: Any) -> None:
         maplist = [
             (
                 filtereddata.reshape((xsize, ysize, numslices, timepoints)),
-                "cardfiltResult",
+                "cardfilterCleaned",
                 "bold",
                 None,
                 f"Cardiac filtered BOLD data after {regressiontype} regression",
             ),
             (
                 datatoremove.reshape((xsize, ysize, numslices, timepoints)),
-                "cardfiltRemoved",
+                "cardfilterRemoved",
                 "bold",
                 None,
                 f"Cardiac noise removed with {regressiontype} regression",

rapidtide/workflows/happy_parser.py

@@ -498,7 +498,12 @@ def _get_parser() -> Any:
         )
 
     # Output processing
-    output_proc = parser.add_argument_group("Output processing")
+    output_proc = parser.add_argument_group(
+        title="Output processing - mutually exclusive options",
+        description=(
+            "Optional cardiac noise removal.  You can do either spatial or temporal regression, but not both."
+        ),
+    ).add_mutually_exclusive_group()
     output_proc.add_argument(
         "--spatialregression",
         dest="dospatialregression",
@@ -909,7 +914,8 @@ def process_args(inputargs: Optional[Any] = None) -> Any:
             args.modelname = DEFAULT_PT_DL_MODEL
         else:
             args.modelname = DEFAULT_TF_DL_MODEL
-        print(f"No model specified.  {args.usepytorch=}, so using {args.modelname}")
+        if args.debug:
+            print(f"No model specified.  {args.usepytorch=}, so using {args.modelname}")
 
     if args.debug:
         print()
@@ -940,7 +946,7 @@ def process_args(inputargs: Optional[Any] = None) -> Any:
 
     # process motionfile information
     if args.motionfilespec is not None:
-        (args.motionfilename, args.motionfilecolspec) = tide_io.parsefilespec(args.motionfilespec)
+        args.motionfilename, args.motionfilecolspec = tide_io.parsefilespec(args.motionfilespec)
     else:
         args.motionfilename = None
 

rapidtide/workflows/niftistats.py

@@ -411,7 +411,7 @@ def niftistats_main(calctype: str = "icc") -> None:
     if calctype == "icc":
         measlist = tide_io.readvecs(args.measurementlist, thedtype=str)
         print(f"measurementlist shape: {measlist.shape}")
-        (nummeas, numsubjs) = measlist.shape[0], measlist.shape[1]
+        nummeas, numsubjs = measlist.shape[0], measlist.shape[1]
         if nummeas < 2:
             print(
                 "ICC requires at least two measurements per subject - specify at least two measurements."

rapidtide/workflows/parser_funcs.py

@@ -19,6 +19,7 @@
 """
 Functions for parsers.
 """
+
 import argparse
 import os.path as op
 import sys

rapidtide/workflows/rapidtide_parser.py

@@ -2171,7 +2171,7 @@ def process_args(inputargs: Optional[Any] = None) -> Tuple[Any, object]:
 
     # motion processing
     if args["motionfilespec"] is not None:
-        (args["motionfilename"], args["motionfilecolspec"]) = tide_io.parsefilespec(
+        args["motionfilename"], args["motionfilecolspec"] = tide_io.parsefilespec(
             args["motionfilespec"]
         )
     else:

rapidtide/workflows/utils.py

@@ -17,6 +17,7 @@
 #
 #
 """Utility functions for rapidtide workflows."""
+
 import logging
 import os
 from typing import Any, Optional

rapidtide/workflows/utils_doc.py

@@ -17,6 +17,7 @@
 #
 #
 """Utility functions for rapidtide workflows."""
+
 import logging
 import os
 from typing import Any, Optional

{rapidtide-3.1.3.dist-info → rapidtide-3.1.4.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: rapidtide
-Version: 3.1.3
+Version: 3.1.4
 Summary: Tools for performing correlation analysis on fMRI data.
 Author: Taylor Salo, Daniel M. Drucker, Ph.D., Jeffrey N Stout, Yaroslav O. Halchenko, Derek Monroe
 Author-email: "Blaise deB. Frederick" <blaise.frederick@gmail.com>

{rapidtide-3.1.3.dist-info → rapidtide-3.1.4.dist-info}/RECORD

@@ -7,14 +7,14 @@ cloud/rapidtide-HCPYA,sha256=kqW8ENbOQhvVqZGz-HqiVbrbzHy4cfyy1rk8ejpJor0,963
 cloud/rapidtide-cloud-test,sha256=SATOwGo4QYLvt-6hE0e3wyK9JjuDU5XzfLrfMoybvcY,466
 cloud/simple-cp-test,sha256=5ef8wmLfcKdny59BV6_DnAPj7O_mi0rOHdFZVN2iiLA,421
 rapidtide/Colortables.py,sha256=wKglfM9bOoHDlD_neHoATk29TP0auQBM7dw_qxsDyr4,22131
-rapidtide/OrthoImageItem.py,sha256=Y2koDe9bUK6v9xMSXbF9pIgQQMMuBH3GwunFvHQtOP4,58060
+rapidtide/OrthoImageItem.py,sha256=ytmCgUHvmT1ZvVIPU3uLsb2_95FoeEWNKWQoxNEYBEw,58061
 rapidtide/RapidtideDataset.py,sha256=qlINqWdOGhfTIHko9MRsmHM_KjGUsXStq1haj0Z7HDA,107160
 rapidtide/__init__.py,sha256=cECnPfGNIWXETiummGLjKcNXLROSDiFlLp-RpZSavwc,97
-rapidtide/_version.py,sha256=iXBvjT-8d3K6VYulbrepYf8IKkij-EQok2VgCniK-ko,497
-rapidtide/calccoherence.py,sha256=RT7wgof_4ldoIukhTdyVBr6-GZhhUI9zNX2dTEBVvVg,9926
+rapidtide/_version.py,sha256=yrAQ1sJEROq7QVbETO_zYO1mOLbG1_0kwC4PrmvodCI,497
+rapidtide/calccoherence.py,sha256=2Z9pfKxW2masJmArl77DqhP5tIWQGuJnWCehq9A2ZiQ,9924
 rapidtide/calcnullsimfunc.py,sha256=bfEMRUVdnwfe-Zr6a2xF_gikOimLtqSky2K5Zm_lsbA,10625
-rapidtide/calcsimfunc.py,sha256=1nNm6k07J99ofrqE0GRGptC1kDqqI1O-PZbBQ61iqlM,13094
-rapidtide/correlate.py,sha256=xearAVKYDvFtJl7lRIEi23ejGZo1udi2bvOFeYnrcGQ,70231
+rapidtide/calcsimfunc.py,sha256=LiP4E_tEfOumX5ct0oN5vlzAgCXth7U-TqxrOZ7SMpk,13092
+rapidtide/correlate.py,sha256=3ZDvw7K8F45Zl_yIl7UF3uSeVCwyMpts56-fmW4EiAQ,70232
 rapidtide/decorators.py,sha256=k-83nDT1sv6q6tP-xDqfqQdMh1d7V4mRJNBz7uZ3rkk,2628
 rapidtide/dlfilter.py,sha256=xgOVJ5hpl_sNVEUj1McJKQ5KTv_skJ90cePAzcJn4zc,141199
 rapidtide/dlfiltertorch.py,sha256=rO81PVMKTLa1oRwGktnCM_RlMwqmgPxFL8RXL-pnd_0,189471
@@ -24,11 +24,11 @@ rapidtide/ffttools.py,sha256=eJHgT-vCzX0CkCol3FcvQODIHwzJeNwxRciJTkm5ftA,5105
 rapidtide/filter.py,sha256=oN8n2RwjHrQ5Su-vL9Zuu-wJNbmA0VzmWEKJ5hM6lBo,114829
 rapidtide/fit.py,sha256=7jRIq2vvzEB_Y1yCezdOW3vWqZic5yk-ApRop7BhMRc,151494
 rapidtide/genericmultiproc.py,sha256=MxwYMhBHbrzZke5NUKTcpkM38DG63yvdkSv2ckvA8HA,6490
-rapidtide/happy_supportfuncs.py,sha256=2dUszUsBcMQecjBI0ZmpfEfaBeGl_-Jx8P_NyFlQFKI,138039
+rapidtide/happy_supportfuncs.py,sha256=rikNuHMoIKxPEGUX2RxhOcH6xiNKevrQ83zNgJ6iUKc,138037
 rapidtide/helper_classes.py,sha256=or_AFYrqskn0ezv0NtlZGXp0P23CsQgz97Spqz80hPU,30042
 rapidtide/io.py,sha256=Z4x28heuKzh1EvP7t-hp5aRi1z7V4RzKm7anqbm8ARU,155029
-rapidtide/linfitfiltpass.py,sha256=N_MLrD2D_oz_9TgICfh1Vi8lt4tXotWPpO0lPaQb1U4,30567
-rapidtide/makelaggedtcs.py,sha256=neSLAOZVsCttxQyFz8m3SwsGbsWXq7Ia0Svtsti_8So,9804
+rapidtide/linfitfiltpass.py,sha256=DTre1LlGWbo7GKAmofWxsPONDjcYt2pnlqn_KGfrcxU,31037
+rapidtide/makelaggedtcs.py,sha256=PWYmaK-Hmvy12WQKVVJJluG81vMoKG0GcKWzl94FEgY,9802
 rapidtide/maskutil.py,sha256=PuWKC7qVGUp1IjnUgtfUJBPzEv60U0atBaIcqorI07Y,26511
 rapidtide/miscmath.py,sha256=OWGAbxh8ReW3OVMXD6isRYQI17dYvolB7jcciWvkH7o,42192
 rapidtide/multiproc.py,sha256=c_kmcFu669etEaeWZ3rK6Gg6uka_X4LDibCbWSOAIe4,13091
@@ -77,7 +77,7 @@ rapidtide/data/examples/src/testfmridocker,sha256=jjL7bK29rrcog6uO9BtvcyAU3Sv8_5
 rapidtide/data/examples/src/testfrozen,sha256=K3qUWDRKPPiCXRgIFuPdwUUjUTzf4QBW8UUhR75NzDM,283
 rapidtide/data/examples/src/testfuncs,sha256=B-6dZTos7kW1hpkXoBwlj3j2Wf4F4nut-jy3y10wkF8,1569
 rapidtide/data/examples/src/testglmfilt,sha256=HHGBjj5X-IQGQxBX_AvsIp5CXjKRok0ovCmg0hB3S_Y,3363
-rapidtide/data/examples/src/testhappy,sha256=19PwvJhfmhwONdjmo6xnSYTtm4kYAZfyN2erc4TVehY,2099
+rapidtide/data/examples/src/testhappy,sha256=t0-jat3rIskQFSFeztUmrBPx0ZmeOLkFqH-NsvTROqs,2255
 rapidtide/data/examples/src/testinitdelay,sha256=ts_r5WZBLJDQ3UfPmJ9sfXlO0arO9dhGCQ_Y1wYvjMk,559
 rapidtide/data/examples/src/testlinfit,sha256=oPnkHJ6lcwsuJhnSMMK7Gx3DHSCf6JK7CIYuIMHbyNA,471
 rapidtide/data/examples/src/testlocalflow,sha256=hEwstisbWVuALr_29fBJ2nHETKkEF_9qK8wJ4kzuiJk,596
@@ -325,10 +325,10 @@ rapidtide/workflows/applyppgproc.py,sha256=Nl1kjOq-A1_Q6WlUHzKftlcBNo6nvgScF0oNQ
 rapidtide/workflows/atlasaverage.py,sha256=YRjwcugpN8u-QlYE9XnC3MVTWeh9i3AYd4FskzjZeKk,23586
 rapidtide/workflows/atlastool.py,sha256=vG5MxpLQnEzcYhAcw1fIiPGxNYiTajM1mDBRF27SLz4,19663
 rapidtide/workflows/calcSimFuncMap.py,sha256=cSWb2UNo6iO69pNFTfq4Ctd5geJOxUd031mDD14WFs4,17374
-rapidtide/workflows/calctexticc.py,sha256=Ot05uFtz6w2_q4cXitXhqwt_8tqZmElKLey6cIvGxAY,17470
+rapidtide/workflows/calctexticc.py,sha256=kll-PCDPWYH7YWSVNO98FttEX8095pXTLewh1Xdn6GE,17468
 rapidtide/workflows/ccorrica.py,sha256=N7LLfdZ3L2mmRtXvWGrxW5aG7cUKFL009a4aNi9UTJc,14223
 rapidtide/workflows/cleanregressor.py,sha256=Ozkn6zWjCIf02Y-sgnFs-YCsTbHL7j2yuJfh83UGtHI,15534
-rapidtide/workflows/delayvar.py,sha256=cKEcg_2PuJO396Cj2Seo93EDgnxIcGp-xeO99cSPxe0,44581
+rapidtide/workflows/delayvar.py,sha256=ZwygIp_9qw2b5MAoBnhKKpIQJ9leQVgXlcAkRX7aydI,44579
 rapidtide/workflows/diffrois.py,sha256=uB_go8wnEScVzyKplpzZazcnyaWIWHEPUYqemCuivMg,8446
 rapidtide/workflows/endtidalproc.py,sha256=MLuLWa2eoyZGxWIyO-gZXnntw40eAP86qhHizfaqQPI,9555
 rapidtide/workflows/fdica.py,sha256=sSVBrc_bBvFFK1E5-62Kgk4DmGC3iW1aFYGkBtEZcZU,21434
@@ -337,19 +337,19 @@ rapidtide/workflows/filttc.py,sha256=7m1Rm3wwR0RQWI5L-Eclrx4KUopL0V50NT6fDUaomss
 rapidtide/workflows/fitSimFuncMap.py,sha256=kjmLGP80VDOBYzkTa7y1yA1tNqepAwDLaI2-kKcR3D4,21845
 rapidtide/workflows/fixtr.py,sha256=W-XViiHn2OOSy1MuSJxgbMsYyBsI6GykB9CxBFgfHSA,4406
 rapidtide/workflows/gmscalc.py,sha256=7XsqUQDCousfaqdYiDKz5IO8FodyCbam6gIfB8m1w6o,10084
-rapidtide/workflows/happy.py,sha256=5l3UslpZLRKaxA3oIuZIqeU_baqTBqnDLcLldlpezpk,96716
+rapidtide/workflows/happy.py,sha256=oIx6N_zYqKNvl2C76nxgVdUwO4daAPKemc2LEiq-eXk,97876
 rapidtide/workflows/happy2std.py,sha256=yuRodhqlzwQg4ew7xtlKoQaJbECbZa4vNssd8jUJlzw,13501
-rapidtide/workflows/happy_parser.py,sha256=K_IW92JVPH0QdD-QlphPaK-viKva-qOE9lO-t0FDDMY,32624
+rapidtide/workflows/happy_parser.py,sha256=JYPtovR53xOcUOMhLqS6Kr8rsg6NyzLWotkMxIGi_XI,32874
 rapidtide/workflows/histnifti.py,sha256=CfMzTUrYfvB3O1-ichu65cJLjnkQRueHYBC3ptRoUSM,15722
 rapidtide/workflows/histtc.py,sha256=zgLLKYyhuQSw4TfJhIjrmsEuFgF4cSFjig90HNTN-5o,7424
 rapidtide/workflows/linfitfilt.py,sha256=pAqv6L6Iniw6sjZeED0C6etuSPlWj7qh8XWohHjo3eo,13894
 rapidtide/workflows/localflow.py,sha256=s11r9b_T_IKU3P2jce4ZOlRUuKIwvlPFucbzsp_uc4k,34401
 rapidtide/workflows/mergequality.py,sha256=FPItpGKlgXbLoyBBQZJ5G5HOd38wPGUQZa7X78_jz3s,18344
 rapidtide/workflows/niftidecomp.py,sha256=Dv3PqSEW5_2AEoMlQm-U4FkABKASSoT1OS6ExwzMBv8,26116
-rapidtide/workflows/niftistats.py,sha256=wtTy4gv6_qOkHjuyYMAM1ovexdPvMJszkHFW1nOYKmk,24364
+rapidtide/workflows/niftistats.py,sha256=85wrzsN8KyCiUuNRmj0Rn3q1K1XNzfMfHV15TBNyyqM,24362
 rapidtide/workflows/pairproc.py,sha256=nfzyBcjiiogaEB9fdzZqqkNN1iUf0mWaB8W3-z6tsrU,10063
 rapidtide/workflows/pairwisemergenifti.py,sha256=JETsEp3mrIRSF3f68rKBB0a8gNprr3VHOn0isEXUh9w,6624
-rapidtide/workflows/parser_funcs.py,sha256=cjTi16T009zZOydDIinzJZuVqN4vxNIC6NyWcVDk5mo,75799
+rapidtide/workflows/parser_funcs.py,sha256=-d7dng7n_kKHXBMqy-hL3Hq1ycJ93IpRV7L8V1ISIWo,75800
 rapidtide/workflows/physiofreq.py,sha256=k5oWYpxh9JZ1bcgc_9l2oSs9650gdA_WjtqZyCtnyAM,10113
 rapidtide/workflows/pixelcomp.py,sha256=6Nf-UNsq6Z_UWajMa_QsRqZEkWVxZSq8TVihe9RFzrY,13819
 rapidtide/workflows/plethquality.py,sha256=CWoWuaInEycuZYxLPsa2EF79Uf0oXKO_p6C28-Ue7Do,7028
@@ -358,7 +358,7 @@ rapidtide/workflows/proj2flow.py,sha256=ifp5Uc4pUijKggP2fr0prrE72i01r4OXBNMwTkRR
 rapidtide/workflows/rankimage.py,sha256=CvECpIIo6KQkgZN1nAiu5xcxPeWbM-UxQpvi2o3XIho,7129
 rapidtide/workflows/rapidtide.py,sha256=ksQrwM3NGv4Aqk2__yrgx05jaKhikePUq7sb3saaMiY,144261
 rapidtide/workflows/rapidtide2std.py,sha256=Wo1wGeW-4z-Mwm1-5zTJGQc7Mwks6Y2byPhI250hKWU,14330
-rapidtide/workflows/rapidtide_parser.py,sha256=GdJU4rGnLSH0YjV3SsjsxIKYlZcjoyFcNtocrqZgSAg,81581
+rapidtide/workflows/rapidtide_parser.py,sha256=AUW9ZUcO7uellfRtUjqJlR0asUjT8Fk1506IeZOl4B4,81579
 rapidtide/workflows/refineDelayMap.py,sha256=pO1K9v9z4Y29RTXQcSUTbG25CKstu0zUOSfJvvvWojo,7941
 rapidtide/workflows/refineRegressor.py,sha256=ySyH1fQUeiTRUemEhxQybRtqLs7F89foTH8lWwL14mo,47154
 rapidtide/workflows/regressfrommaps.py,sha256=xhAgQYkKy3SOhpdhT12U9qMtXeXXSc3VbEuFM8OkNQE,10216
@@ -382,12 +382,12 @@ rapidtide/workflows/synthASL.py,sha256=4YY9AvFfyVDrSHKvU6Uc0eTQMzvxhBqvpjK1jDblS
 rapidtide/workflows/tcfrom2col.py,sha256=aK-EaFu1HP0NqK_SUd9N9O2-aBeJ0eiFZ44QJa2FZLM,4428
 rapidtide/workflows/tcfrom3col.py,sha256=mb1d7-B67Hht0EDASfJBbjNEETPSn26tHMpwY541emY,4405
 rapidtide/workflows/tidepool.py,sha256=wIUknTWvr0u5wfPC_gPGQva064qK-xLV7mCb_pIUsz4,188244
-rapidtide/workflows/utils.py,sha256=ZHERuhotw_KB2Jxf8JtbKgpInbM20rX9uixTIldk7Tg,5612
-rapidtide/workflows/utils_doc.py,sha256=7WZ_E_4mnVO3iDynZ8Gd6FUBC9pz-Csz2TmNHT-72zA,10283
+rapidtide/workflows/utils.py,sha256=l_bD899y9Lf_lrjqVN5ejeYzQ9cE5QfzqBa94scEV50,5613
+rapidtide/workflows/utils_doc.py,sha256=mWmUsqhz2ZWTFOuIphDIqDw7QHNJhHo3-BqPZLmr_OU,10284
 rapidtide/workflows/variabilityizer.py,sha256=v25jKiWjwt9e2sBOfLrqG5eLEK7hiQ_zdWbNVW2Gpis,7585
-rapidtide-3.1.3.dist-info/licenses/LICENSE,sha256=psuoW8kuDP96RQsdhzwOqi6fyWv0ct8CR6Jr7He_P_k,10173
-rapidtide-3.1.3.dist-info/METADATA,sha256=XGuU65vjv6YsGQc81jtRAuRH8ZWAzkcJhKJpCzeX5sQ,15797
-rapidtide-3.1.3.dist-info/WHEEL,sha256=qELbo2s1Yzl39ZmrAibXA2jjPLUYfnVhUNTlyF1rq0Y,92
-rapidtide-3.1.3.dist-info/entry_points.txt,sha256=dVXEEfqnv_eUNdn02PfZTTd5KK4vZwumP8HCfhUVhag,3380
-rapidtide-3.1.3.dist-info/top_level.txt,sha256=MnNXGfbrIBc9RnAqzBHOWd3GQO-aIUDnRTz4_5VjH5g,16
-rapidtide-3.1.3.dist-info/RECORD,,
+rapidtide-3.1.4.dist-info/licenses/LICENSE,sha256=psuoW8kuDP96RQsdhzwOqi6fyWv0ct8CR6Jr7He_P_k,10173
+rapidtide-3.1.4.dist-info/METADATA,sha256=6G2G3BonUdbMK8MKVJNtFthoz46Yjt4V93cP4ADxpfM,15797
+rapidtide-3.1.4.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
+rapidtide-3.1.4.dist-info/entry_points.txt,sha256=dVXEEfqnv_eUNdn02PfZTTd5KK4vZwumP8HCfhUVhag,3380
+rapidtide-3.1.4.dist-info/top_level.txt,sha256=MnNXGfbrIBc9RnAqzBHOWd3GQO-aIUDnRTz4_5VjH5g,16
+rapidtide-3.1.4.dist-info/RECORD,,

{rapidtide-3.1.3.dist-info → rapidtide-3.1.4.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (80.10.1)
+Generator: setuptools (80.10.2)
 Root-Is-Purelib: true
 Tag: py3-none-any