rapidtide 3.0a15__py3-none-any.whl → 3.0.2__py3-none-any.whl

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Files changed (23) hide show
  1. rapidtide/DerivativeDelay.py +0 -4
  2. rapidtide/data/examples/src/testfmri +2 -2
  3. rapidtide/data/examples/src/testretro +9 -13
  4. rapidtide/happy_supportfuncs.py +70 -234
  5. rapidtide/io.py +19 -23
  6. rapidtide/refinedelay.py +4 -7
  7. rapidtide/tests/cleanposttest +0 -1
  8. rapidtide/tests/test_fullrunrapidtide_v3.py +10 -0
  9. rapidtide/tests/test_fullrunrapidtide_v6.py +0 -1
  10. rapidtide/tests/test_refinedelay.py +0 -3
  11. rapidtide/voxelData.py +125 -14
  12. rapidtide/workflows/delayestimation.py +8 -13
  13. rapidtide/workflows/delayvar.py +11 -13
  14. rapidtide/workflows/happy.py +72 -179
  15. rapidtide/workflows/rapidtide.py +99 -226
  16. rapidtide/workflows/regressfrommaps.py +12 -7
  17. rapidtide/workflows/retroregress.py +396 -336
  18. {rapidtide-3.0a15.dist-info → rapidtide-3.0.2.dist-info}/METADATA +7 -9
  19. {rapidtide-3.0a15.dist-info → rapidtide-3.0.2.dist-info}/RECORD +23 -23
  20. {rapidtide-3.0a15.dist-info → rapidtide-3.0.2.dist-info}/WHEEL +1 -1
  21. {rapidtide-3.0a15.dist-info → rapidtide-3.0.2.dist-info}/entry_points.txt +0 -0
  22. {rapidtide-3.0a15.dist-info → rapidtide-3.0.2.dist-info}/licenses/LICENSE +0 -0
  23. {rapidtide-3.0a15.dist-info → rapidtide-3.0.2.dist-info}/top_level.txt +0 -0
rapidtide/workflows/regressfrommaps.py CHANGED
@@ -53,6 +53,7 @@ def regressfrommaps(
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  mp_chunksize=50000,
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  showprogressbar=True,
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  alwaysmultiproc=False,
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+ saveEVsandquit=False,
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  debug=False,
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  ):
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  if debug:
@@ -107,12 +108,6 @@ def regressfrommaps(
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  },
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  )
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- # and do the filtering
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- if LGR is not None:
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- LGR.info("Start filtering operation")
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- if TimingLGR is not None:
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- TimingLGR.info("Start filtering operation")
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-
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  if regressderivs > 0:
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  if debug:
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  print(f"adding derivatives up to order {regressderivs} prior to regression")
@@ -126,9 +121,19 @@ def regressfrommaps(
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  print(f"using raw lagged regressors for regression")
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  regressorset = lagtc
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  evset = rt_floatset(genlagtc.yfromx(initial_fmri_x))
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-
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  if debug:
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  print(f"{regressorset.shape=}")
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+
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+ if saveEVsandquit:
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+ return 0, regressorset, evset
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+
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+ # now do the filtering
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+ if LGR is not None:
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+ LGR.info("Start filtering operation")
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+ if TimingLGR is not None:
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+ TimingLGR.info("Start filtering operation")
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+
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+
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  voxelsprocessed_regressionfilt = tide_linfitfiltpass.linfitfiltpass(
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  numvalidspatiallocs,
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  fmri_data_valid,