quadra 2.3.0a2__py3-none-any.whl → 2.3.1__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- hydra_plugins/quadra_searchpath_plugin.py +0 -0
- quadra/__init__.py +1 -1
- quadra/callbacks/__init__.py +0 -0
- quadra/callbacks/anomalib.py +3 -2
- quadra/callbacks/lightning.py +3 -1
- quadra/callbacks/mlflow.py +0 -0
- quadra/callbacks/scheduler.py +0 -0
- quadra/configs/__init__.py +0 -0
- quadra/configs/backbone/caformer_m36.yaml +0 -0
- quadra/configs/backbone/caformer_s36.yaml +0 -0
- quadra/configs/backbone/convnextv2_base.yaml +0 -0
- quadra/configs/backbone/convnextv2_femto.yaml +0 -0
- quadra/configs/backbone/convnextv2_tiny.yaml +0 -0
- quadra/configs/backbone/dino_vitb8.yaml +0 -0
- quadra/configs/backbone/dino_vits8.yaml +0 -0
- quadra/configs/backbone/dinov2_vitb14.yaml +0 -0
- quadra/configs/backbone/dinov2_vits14.yaml +0 -0
- quadra/configs/backbone/efficientnet_b0.yaml +0 -0
- quadra/configs/backbone/efficientnet_b1.yaml +0 -0
- quadra/configs/backbone/efficientnet_b2.yaml +0 -0
- quadra/configs/backbone/efficientnet_b3.yaml +0 -0
- quadra/configs/backbone/efficientnetv2_s.yaml +0 -0
- quadra/configs/backbone/levit_128s.yaml +0 -0
- quadra/configs/backbone/mnasnet0_5.yaml +0 -0
- quadra/configs/backbone/resnet101.yaml +0 -0
- quadra/configs/backbone/resnet18.yaml +0 -0
- quadra/configs/backbone/resnet18_ssl.yaml +0 -0
- quadra/configs/backbone/resnet50.yaml +0 -0
- quadra/configs/backbone/smp.yaml +0 -0
- quadra/configs/backbone/tiny_vit_21m_224.yaml +0 -0
- quadra/configs/backbone/unetr.yaml +0 -0
- quadra/configs/backbone/vit16_base.yaml +0 -0
- quadra/configs/backbone/vit16_small.yaml +0 -0
- quadra/configs/backbone/vit16_tiny.yaml +0 -0
- quadra/configs/backbone/xcit_tiny_24_p8_224.yaml +0 -0
- quadra/configs/callbacks/all.yaml +0 -0
- quadra/configs/callbacks/default.yaml +0 -0
- quadra/configs/callbacks/default_anomalib.yaml +0 -0
- quadra/configs/config.yaml +0 -0
- quadra/configs/core/default.yaml +0 -0
- quadra/configs/datamodule/base/anomaly.yaml +0 -0
- quadra/configs/datamodule/base/classification.yaml +0 -0
- quadra/configs/datamodule/base/multilabel_classification.yaml +0 -0
- quadra/configs/datamodule/base/segmentation.yaml +0 -0
- quadra/configs/datamodule/base/segmentation_multiclass.yaml +0 -0
- quadra/configs/datamodule/base/sklearn_classification.yaml +0 -0
- quadra/configs/datamodule/base/sklearn_classification_patch.yaml +0 -0
- quadra/configs/datamodule/base/ssl.yaml +0 -0
- quadra/configs/datamodule/generic/imagenette/classification/base.yaml +0 -0
- quadra/configs/datamodule/generic/imagenette/ssl/base.yaml +0 -0
- quadra/configs/datamodule/generic/mnist/anomaly/base.yaml +0 -0
- quadra/configs/datamodule/generic/mvtec/anomaly/base.yaml +0 -0
- quadra/configs/datamodule/generic/oxford_pet/segmentation/base.yaml +0 -0
- quadra/configs/experiment/base/anomaly/cfa.yaml +0 -0
- quadra/configs/experiment/base/anomaly/cflow.yaml +0 -0
- quadra/configs/experiment/base/anomaly/csflow.yaml +0 -0
- quadra/configs/experiment/base/anomaly/draem.yaml +0 -0
- quadra/configs/experiment/base/anomaly/efficient_ad.yaml +0 -0
- quadra/configs/experiment/base/anomaly/fastflow.yaml +0 -0
- quadra/configs/experiment/base/anomaly/inference.yaml +0 -0
- quadra/configs/experiment/base/anomaly/padim.yaml +0 -0
- quadra/configs/experiment/base/anomaly/patchcore.yaml +0 -0
- quadra/configs/experiment/base/classification/classification.yaml +0 -0
- quadra/configs/experiment/base/classification/classification_evaluation.yaml +0 -0
- quadra/configs/experiment/base/classification/multilabel_classification.yaml +0 -0
- quadra/configs/experiment/base/classification/sklearn_classification.yaml +0 -0
- quadra/configs/experiment/base/classification/sklearn_classification_patch.yaml +0 -0
- quadra/configs/experiment/base/classification/sklearn_classification_patch_test.yaml +0 -0
- quadra/configs/experiment/base/classification/sklearn_classification_test.yaml +0 -0
- quadra/configs/experiment/base/segmentation/smp.yaml +0 -0
- quadra/configs/experiment/base/segmentation/smp_evaluation.yaml +0 -0
- quadra/configs/experiment/base/segmentation/smp_multiclass.yaml +0 -0
- quadra/configs/experiment/base/segmentation/smp_multiclass_evaluation.yaml +0 -0
- quadra/configs/experiment/base/ssl/barlow.yaml +0 -0
- quadra/configs/experiment/base/ssl/byol.yaml +0 -0
- quadra/configs/experiment/base/ssl/dino.yaml +0 -0
- quadra/configs/experiment/base/ssl/linear_eval.yaml +0 -0
- quadra/configs/experiment/base/ssl/simclr.yaml +0 -0
- quadra/configs/experiment/base/ssl/simsiam.yaml +0 -0
- quadra/configs/experiment/custom/cls.yaml +0 -0
- quadra/configs/experiment/default.yaml +0 -0
- quadra/configs/experiment/generic/imagenette/classification/default.yaml +0 -0
- quadra/configs/experiment/generic/imagenette/ssl/barlow.yaml +0 -0
- quadra/configs/experiment/generic/imagenette/ssl/byol.yaml +0 -0
- quadra/configs/experiment/generic/imagenette/ssl/dino.yaml +0 -0
- quadra/configs/experiment/generic/imagenette/ssl/simclr.yaml +0 -0
- quadra/configs/experiment/generic/imagenette/ssl/simsiam.yaml +0 -0
- quadra/configs/experiment/generic/mnist/anomaly/cfa.yaml +0 -0
- quadra/configs/experiment/generic/mnist/anomaly/cflow.yaml +0 -0
- quadra/configs/experiment/generic/mnist/anomaly/csflow.yaml +0 -0
- quadra/configs/experiment/generic/mnist/anomaly/draem.yaml +0 -0
- quadra/configs/experiment/generic/mnist/anomaly/fastflow.yaml +0 -0
- quadra/configs/experiment/generic/mnist/anomaly/inference.yaml +0 -0
- quadra/configs/experiment/generic/mnist/anomaly/padim.yaml +0 -0
- quadra/configs/experiment/generic/mnist/anomaly/patchcore.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/cfa.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/cflow.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/csflow.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/draem.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/efficient_ad.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/fastflow.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/inference.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/padim.yaml +0 -0
- quadra/configs/experiment/generic/mvtec/anomaly/patchcore.yaml +0 -0
- quadra/configs/experiment/generic/oxford_pet/segmentation/smp.yaml +0 -0
- quadra/configs/export/default.yaml +0 -0
- quadra/configs/hydra/anomaly_custom.yaml +0 -0
- quadra/configs/hydra/default.yaml +0 -0
- quadra/configs/inference/default.yaml +0 -0
- quadra/configs/logger/comet.yaml +0 -0
- quadra/configs/logger/csv.yaml +0 -0
- quadra/configs/logger/mlflow.yaml +0 -0
- quadra/configs/logger/tensorboard.yaml +0 -0
- quadra/configs/loss/asl.yaml +0 -0
- quadra/configs/loss/barlow.yaml +0 -0
- quadra/configs/loss/bce.yaml +0 -0
- quadra/configs/loss/byol.yaml +0 -0
- quadra/configs/loss/cross_entropy.yaml +0 -0
- quadra/configs/loss/dino.yaml +0 -0
- quadra/configs/loss/simclr.yaml +0 -0
- quadra/configs/loss/simsiam.yaml +0 -0
- quadra/configs/loss/smp_ce.yaml +0 -0
- quadra/configs/loss/smp_dice.yaml +0 -0
- quadra/configs/loss/smp_dice_multiclass.yaml +0 -0
- quadra/configs/loss/smp_mcc.yaml +0 -0
- quadra/configs/loss/vicreg.yaml +0 -0
- quadra/configs/model/anomalib/cfa.yaml +0 -0
- quadra/configs/model/anomalib/cflow.yaml +0 -0
- quadra/configs/model/anomalib/csflow.yaml +0 -0
- quadra/configs/model/anomalib/dfm.yaml +0 -0
- quadra/configs/model/anomalib/draem.yaml +0 -0
- quadra/configs/model/anomalib/efficient_ad.yaml +0 -0
- quadra/configs/model/anomalib/fastflow.yaml +0 -0
- quadra/configs/model/anomalib/padim.yaml +0 -0
- quadra/configs/model/anomalib/patchcore.yaml +0 -0
- quadra/configs/model/barlow.yaml +0 -0
- quadra/configs/model/byol.yaml +0 -0
- quadra/configs/model/classification.yaml +0 -0
- quadra/configs/model/dino.yaml +0 -0
- quadra/configs/model/logistic_regression.yaml +0 -0
- quadra/configs/model/multilabel_classification.yaml +0 -0
- quadra/configs/model/simclr.yaml +0 -0
- quadra/configs/model/simsiam.yaml +0 -0
- quadra/configs/model/smp.yaml +0 -0
- quadra/configs/model/smp_multiclass.yaml +0 -0
- quadra/configs/model/vicreg.yaml +0 -0
- quadra/configs/optimizer/adam.yaml +0 -0
- quadra/configs/optimizer/adamw.yaml +0 -0
- quadra/configs/optimizer/default.yaml +0 -0
- quadra/configs/optimizer/lars.yaml +0 -0
- quadra/configs/optimizer/sgd.yaml +0 -0
- quadra/configs/scheduler/default.yaml +0 -0
- quadra/configs/scheduler/rop.yaml +0 -0
- quadra/configs/scheduler/step.yaml +0 -0
- quadra/configs/scheduler/warmrestart.yaml +0 -0
- quadra/configs/scheduler/warmup.yaml +0 -0
- quadra/configs/task/anomalib/cfa.yaml +0 -0
- quadra/configs/task/anomalib/cflow.yaml +0 -0
- quadra/configs/task/anomalib/csflow.yaml +0 -0
- quadra/configs/task/anomalib/draem.yaml +0 -0
- quadra/configs/task/anomalib/efficient_ad.yaml +0 -0
- quadra/configs/task/anomalib/fastflow.yaml +0 -0
- quadra/configs/task/anomalib/inference.yaml +0 -0
- quadra/configs/task/anomalib/padim.yaml +0 -0
- quadra/configs/task/anomalib/patchcore.yaml +0 -0
- quadra/configs/task/classification.yaml +0 -0
- quadra/configs/task/classification_evaluation.yaml +0 -0
- quadra/configs/task/default.yaml +0 -0
- quadra/configs/task/segmentation.yaml +0 -0
- quadra/configs/task/segmentation_evaluation.yaml +0 -0
- quadra/configs/task/sklearn_classification.yaml +0 -0
- quadra/configs/task/sklearn_classification_patch.yaml +0 -0
- quadra/configs/task/sklearn_classification_patch_test.yaml +0 -0
- quadra/configs/task/sklearn_classification_test.yaml +0 -0
- quadra/configs/task/ssl.yaml +0 -0
- quadra/configs/trainer/lightning_cpu.yaml +0 -0
- quadra/configs/trainer/lightning_gpu.yaml +0 -0
- quadra/configs/trainer/lightning_gpu_bf16.yaml +0 -0
- quadra/configs/trainer/lightning_gpu_fp16.yaml +0 -0
- quadra/configs/trainer/lightning_multigpu.yaml +0 -0
- quadra/configs/trainer/sklearn_classification.yaml +0 -0
- quadra/configs/transforms/byol.yaml +0 -0
- quadra/configs/transforms/byol_no_random_resize.yaml +0 -0
- quadra/configs/transforms/default.yaml +0 -0
- quadra/configs/transforms/default_numpy.yaml +0 -0
- quadra/configs/transforms/default_resize.yaml +0 -0
- quadra/configs/transforms/dino.yaml +0 -0
- quadra/configs/transforms/linear_eval.yaml +0 -0
- quadra/datamodules/__init__.py +0 -0
- quadra/datamodules/anomaly.py +0 -0
- quadra/datamodules/base.py +5 -5
- quadra/datamodules/classification.py +2 -2
- quadra/datamodules/generic/__init__.py +0 -0
- quadra/datamodules/generic/imagenette.py +0 -0
- quadra/datamodules/generic/mnist.py +0 -0
- quadra/datamodules/generic/mvtec.py +0 -0
- quadra/datamodules/generic/oxford_pet.py +0 -0
- quadra/datamodules/patch.py +0 -0
- quadra/datamodules/segmentation.py +6 -6
- quadra/datamodules/ssl.py +0 -0
- quadra/datasets/__init__.py +0 -0
- quadra/datasets/anomaly.py +2 -2
- quadra/datasets/classification.py +7 -7
- quadra/datasets/patch.py +1 -1
- quadra/datasets/segmentation.py +0 -0
- quadra/datasets/ssl.py +3 -3
- quadra/losses/__init__.py +0 -0
- quadra/losses/classification/__init__.py +0 -0
- quadra/losses/classification/asl.py +0 -0
- quadra/losses/classification/focal.py +0 -0
- quadra/losses/classification/prototypical.py +0 -0
- quadra/losses/ssl/__init__.py +0 -0
- quadra/losses/ssl/barlowtwins.py +0 -0
- quadra/losses/ssl/byol.py +0 -0
- quadra/losses/ssl/dino.py +0 -0
- quadra/losses/ssl/hyperspherical.py +0 -0
- quadra/losses/ssl/idmm.py +0 -0
- quadra/losses/ssl/simclr.py +0 -0
- quadra/losses/ssl/simsiam.py +0 -0
- quadra/losses/ssl/vicreg.py +0 -0
- quadra/main.py +0 -0
- quadra/metrics/__init__.py +0 -0
- quadra/metrics/segmentation.py +1 -1
- quadra/models/__init__.py +0 -0
- quadra/models/base.py +1 -1
- quadra/models/classification/__init__.py +0 -0
- quadra/models/classification/backbones.py +0 -0
- quadra/models/classification/base.py +0 -0
- quadra/models/evaluation.py +1 -1
- quadra/modules/__init__.py +0 -0
- quadra/modules/backbone.py +0 -0
- quadra/modules/base.py +3 -2
- quadra/modules/classification/__init__.py +0 -0
- quadra/modules/classification/base.py +0 -0
- quadra/modules/ssl/__init__.py +0 -0
- quadra/modules/ssl/barlowtwins.py +0 -0
- quadra/modules/ssl/byol.py +1 -0
- quadra/modules/ssl/common.py +0 -0
- quadra/modules/ssl/dino.py +0 -0
- quadra/modules/ssl/hyperspherical.py +0 -0
- quadra/modules/ssl/idmm.py +0 -0
- quadra/modules/ssl/simclr.py +0 -0
- quadra/modules/ssl/simsiam.py +0 -0
- quadra/modules/ssl/vicreg.py +0 -0
- quadra/optimizers/__init__.py +0 -0
- quadra/optimizers/lars.py +0 -0
- quadra/optimizers/sam.py +0 -0
- quadra/schedulers/__init__.py +0 -0
- quadra/schedulers/base.py +0 -0
- quadra/schedulers/warmup.py +0 -0
- quadra/tasks/__init__.py +0 -0
- quadra/tasks/anomaly.py +7 -4
- quadra/tasks/base.py +8 -4
- quadra/tasks/classification.py +6 -2
- quadra/tasks/patch.py +1 -1
- quadra/tasks/segmentation.py +7 -5
- quadra/tasks/ssl.py +2 -3
- quadra/trainers/README.md +0 -0
- quadra/trainers/__init__.py +0 -0
- quadra/trainers/classification.py +0 -0
- quadra/utils/__init__.py +0 -0
- quadra/utils/anomaly.py +0 -0
- quadra/utils/classification.py +8 -10
- quadra/utils/deprecation.py +0 -0
- quadra/utils/evaluation.py +12 -3
- quadra/utils/export.py +5 -5
- quadra/utils/imaging.py +0 -0
- quadra/utils/logger.py +0 -0
- quadra/utils/mlflow.py +2 -0
- quadra/utils/model_manager.py +0 -0
- quadra/utils/models.py +5 -7
- quadra/utils/patch/__init__.py +0 -0
- quadra/utils/patch/dataset.py +7 -6
- quadra/utils/patch/metrics.py +9 -6
- quadra/utils/patch/model.py +0 -0
- quadra/utils/patch/visualization.py +2 -2
- quadra/utils/resolver.py +0 -0
- quadra/utils/segmentation.py +0 -0
- quadra/utils/tests/__init__.py +0 -0
- quadra/utils/tests/fixtures/__init__.py +0 -0
- quadra/utils/tests/fixtures/dataset/__init__.py +0 -0
- quadra/utils/tests/fixtures/dataset/anomaly.py +0 -0
- quadra/utils/tests/fixtures/dataset/classification.py +0 -0
- quadra/utils/tests/fixtures/dataset/imagenette.py +1 -1
- quadra/utils/tests/fixtures/dataset/segmentation.py +0 -0
- quadra/utils/tests/fixtures/models/__init__.py +0 -0
- quadra/utils/tests/fixtures/models/anomaly.py +0 -0
- quadra/utils/tests/fixtures/models/classification.py +0 -0
- quadra/utils/tests/fixtures/models/segmentation.py +0 -0
- quadra/utils/tests/helpers.py +0 -0
- quadra/utils/tests/models.py +0 -0
- quadra/utils/utils.py +1 -1
- quadra/utils/validator.py +1 -3
- quadra/utils/visualization.py +8 -5
- quadra/utils/vit_explainability.py +1 -1
- {quadra-2.3.0a2.dist-info → quadra-2.3.1.dist-info}/LICENSE +0 -0
- {quadra-2.3.0a2.dist-info → quadra-2.3.1.dist-info}/METADATA +1 -1
- {quadra-2.3.0a2.dist-info → quadra-2.3.1.dist-info}/RECORD +39 -39
- {quadra-2.3.0a2.dist-info → quadra-2.3.1.dist-info}/WHEEL +1 -1
- {quadra-2.3.0a2.dist-info → quadra-2.3.1.dist-info}/entry_points.txt +0 -0
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quadra/__init__.py
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quadra/callbacks/__init__.py
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quadra/callbacks/anomalib.py
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axes = self.axis if len(self.images) > 1 else [self.axis]
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for axis, image_dict in zip(axes, self.images):
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axis.imshow(image_dict["image"], image_dict["color_map"], vmin=0, vmax=255)
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however in practise a few are needed
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It is expected that the user has provided a model or datamodule that has a hyperparameter
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with that name. We will look for this attribute name in the following places
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@@ -7,7 +7,7 @@ import pickle as pkl
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7
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import typing
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8
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from collections.abc import Callable, Iterable, Sequence
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from functools import wraps
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from typing import Any, Literal,
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from typing import Any, Literal, cast
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import albumentations
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import numpy as np
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@@ -20,8 +20,8 @@ from tqdm import tqdm
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from quadra.utils import utils
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log = utils.get_logger(__name__)
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-
TrainDataset =
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ValDataset =
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TrainDataset = torch.utils.data.Dataset | Sequence[torch.utils.data.Dataset]
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|
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ValDataset = torch.utils.data.Dataset | Sequence[torch.utils.data.Dataset]
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TestDataset = torch.utils.data.Dataset
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@@ -260,7 +260,7 @@ class BaseDataModule(LightningDataModule, metaclass=DecorateParentMethod):
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return
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|
# TODO: We need to find a way to annotate the columns of data.
|
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|
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paths_and_hash_length = zip(self.data["samples"], [self.hash_size] * len(self.data))
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paths_and_hash_length = zip(self.data["samples"], [self.hash_size] * len(self.data), strict=False)
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with mp.Pool(min(8, mp.cpu_count() - 1)) as pool:
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raise ValueError("`n_aug_to_take` is not set. Cannot load augmented samples.")
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aug_samples = []
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|
-
for sample, label in zip(samples, targets):
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|
+
for sample, label in zip(samples, targets, strict=False):
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|
aug_samples.append(sample)
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|
aug_labels.append(label)
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|
final_sample = sample
|
|
@@ -243,7 +243,7 @@ class ClassificationDataModule(BaseDataModule):
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|
samples_test, targets_test = self._read_split(self.test_split_file)
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|
samples_train, targets_train = [], []
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|
-
for sample, target in zip(all_samples, all_targets):
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+
for sample, target in zip(all_samples, all_targets, strict=False):
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|
if sample not in samples_test:
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|
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|
samples_train.append(sample)
|
|
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|
targets_train.append(target)
|
|
@@ -251,7 +251,7 @@ class ClassificationDataModule(BaseDataModule):
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|
samples_train, targets_train = self._read_split(self.train_split_file)
|
|
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|
if not self.test_split_file:
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|
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|
samples_test, targets_test = [], []
|
|
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|
-
for sample, target in zip(all_samples, all_targets):
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|
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|
+
for sample, target in zip(all_samples, all_targets, strict=False):
|
|
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|
if sample not in samples_train:
|
|
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|
samples_test.append(sample)
|
|
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|
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