qlever 0.5.23__py3-none-any.whl → 0.5.25__py3-none-any.whl

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Files changed (22) hide show
  1. qlever/Qleverfiles/Qleverfile.ohm-planet +2 -1
  2. qlever/Qleverfiles/Qleverfile.osm-country +3 -2
  3. qlever/Qleverfiles/Qleverfile.osm-planet +4 -3
  4. qlever/Qleverfiles/Qleverfile.uniprot +2 -1
  5. qlever/Qleverfiles/Qleverfile.wikipathways +1 -1
  6. qlever/commands/benchmark_queries.py +1022 -0
  7. qlever/commands/cache_stats.py +54 -32
  8. qlever/commands/index.py +6 -0
  9. qlever/commands/query.py +2 -1
  10. qlever/commands/settings.py +7 -0
  11. qlever/commands/ui.py +11 -7
  12. qlever/commands/update_wikidata.py +554 -0
  13. qlever/qlever_main.py +1 -2
  14. qlever/qleverfile.py +22 -0
  15. qlever/util.py +1 -1
  16. {qlever-0.5.23.dist-info → qlever-0.5.25.dist-info}/METADATA +4 -2
  17. {qlever-0.5.23.dist-info → qlever-0.5.25.dist-info}/RECORD +21 -20
  18. {qlever-0.5.23.dist-info → qlever-0.5.25.dist-info}/WHEEL +1 -1
  19. qlever/commands/example_queries.py +0 -605
  20. {qlever-0.5.23.dist-info → qlever-0.5.25.dist-info}/entry_points.txt +0 -0
  21. {qlever-0.5.23.dist-info → qlever-0.5.25.dist-info}/licenses/LICENSE +0 -0
  22. {qlever-0.5.23.dist-info → qlever-0.5.25.dist-info}/top_level.txt +0 -0
qlever/Qleverfiles/Qleverfile.ohm-planet CHANGED
@@ -11,7 +11,7 @@ NAME = ohm-planet
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  GET_DATA_URL = https://planet.openhistoricalmap.org/planet
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  CHECK_BINARIES = osm2rdf -h > /dev/null || (echo "osm2rdf not found, make sure that it's installed and in your PATH" && exit 1)
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  GET_DATA_CMD_1 = unbuffer wget -O ${NAME}.pbf $$(curl -s ${GET_DATA_URL}/state.txt) 2>&1 | tee ${NAME}.download-log.txt
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- GET_DATA_CMD_2 = osm2rdf ${NAME}.pbf -o ${NAME}.ttl --source-dataset OHM --output-compression gz --store-locations=disk-dense --cache . --num-threads 12 --add-way-node-order --no-untagged-nodes-geometric-relations 2>&1 | tee ${NAME}.osm2rdf-log.txt
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+ GET_DATA_CMD_2 = osm2rdf ${NAME}.pbf -o ${NAME}.ttl --source-dataset OHM --output-compression gz --store-locations=disk-dense --cache . --num-threads 12 --iri-prefix-for-untagged-nodes http://www.openhistoricalmap.org/node/ 2>&1 | tee ${NAME}.osm2rdf-log.txt
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  GET_DATA_CMD = ${CHECK_BINARIES} && ${GET_DATA_CMD_1} && echo && ${GET_DATA_CMD_2}
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  VERSION = $$(date -r ${NAME}.pbf +%d.%m.%Y || echo "NO_DATE")
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  DESCRIPTION = OHM Planet, data from ${GET_DATA_URL} version ${VERSION} (with GeoSPARQL predicates ogc:sfContains and ogc:sfIntersects)
@@ -22,6 +22,7 @@ MULTI_INPUT_JSON = { "cmd": "zcat ${INPUT_FILES}", "parallel": "true" }
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  STXXL_MEMORY = 5G
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  PARSER_BUFFER_SIZE = 50M
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  SETTINGS_JSON = { "num-triples-per-batch": 5000000 }
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+ ENCODE_AS_IDS = https://www.openhistoricalmap.org/node/ http://www.openhistoricalmap.org/node/ https://www.openhistoricalmap.org/way/ https://www.openhistoricalmap.org/relation/ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_node_tagged_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_node_untagged_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_way_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_relation_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_wayarea_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_relationarea_ https://www.openstreetmap.org/changeset/
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  [server]
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  PORT = 7037
qlever/Qleverfiles/Qleverfile.osm-country CHANGED
@@ -16,7 +16,7 @@ NAME = osm-${COUNTRY}
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  PBF = ${NAME}.pbf
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  WITH_TEXT = false
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  VERSION = $$(ls -l --time-style=+%d.%m.%Y ${PBF} 2> /dev/null | cut -d' ' -f6)
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- GET_DATA_CMD = wget -nc -O ${PBF} https://download.geofabrik.de/${CONTINENT}/${COUNTRY}-latest.osm.pbf; rm -f ${NAME}.*.bz2; ( time osm2rdf ${PBF} -o ${NAME}.ttl --cache . ) 2>&1 | tee ${NAME}.osm2rdf-log.txt; rm -f spatial-*
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+ GET_DATA_CMD = wget -nc -O ${PBF} https://download.geofabrik.de/${CONTINENT}/${COUNTRY}-latest.osm.pbf; rm -f ${NAME}.*.bz2; ( time osm2rdf ${PBF} -o ${NAME}.ttl --cache . --iri-prefix-for-untagged-nodes http://www.openstreetmap.org/node/) 2>&1 | tee ${NAME}.osm2rdf-log.txt; rm -f spatial-*
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  DESCRIPTION = OSM ${COUNTRY}, dump from ${VERSION} with ogc:sfContains
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  # Indexer settings
@@ -24,7 +24,8 @@ DESCRIPTION = OSM ${COUNTRY}, dump from ${VERSION} with ogc:sfContains
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  INPUT_FILES = ${data:NAME}.ttl.bz2
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  CAT_INPUT_FILES = bzcat ${data:NAME}.ttl.bz2
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  STXXL_MEMORY = 10G
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- SETTINGS_JSON = { "prefixes-external": [ "\"LINESTRING(", "\"MULTIPOLYGON(", "\"POLYGON(" ], "ascii-prefixes-only": false, "num-triples-per-batch": 1000000 }
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+ SETTINGS_JSON = { "num-triples-per-batch": 10000000 }
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+ ENCODE_AS_IDS = https://www.openstreetmap.org/node/ http://www.openstreetmap.org/node/ https://www.openstreetmap.org/way/ https://www.openstreetmap.org/relation/ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_node_tagged_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_node_untagged_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_way_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_relation_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_wayarea_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_relationarea_ https://www.openstreetmap.org/changeset/
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  # Server settings
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  [server]
qlever/Qleverfiles/Qleverfile.osm-planet CHANGED
@@ -8,10 +8,10 @@
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  [data]
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  NAME = osm-planet
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- DATA_URL = https://osm2rdf.cs.uni-freiburg.de/ttl/planet.osm.ttl.bz2
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- GET_DATA_CMD = unbuffer wget -O ${NAME}.ttl.bz2 ${DATA_URL} | tee ${NAME}.download-log.txt
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+ GET_DATA_URL = https://osm2rdf.cs.uni-freiburg.de/ttl/planet.osm.ttl.bz2
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+ GET_DATA_CMD = unbuffer wget -O ${NAME}.ttl.bz2 ${GET_DATA_URL} | tee ${NAME}.download-log.txt
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  VERSION = $$(date -r ${NAME}.ttl.bz2 +"%d.%m.%Y" || echo "NO_DATE")
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- DESCRIPTION = OSM Planet, data from ${DATA_URL} version ${VERSION} (complete OSM data, with GeoSPARQL predicates ogc:sfContains and ogc:sfIntersects)
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+ DESCRIPTION = OSM from ${GET_DATA_URL} (converted to RDF using osm2rdf, enhanced by GeoSPARQL triples ogc:sfContains, ogc:sfCovers, ogc:sfIntersects, ogc:sfEquals, ogc:sfTouches, ogc:sfCrosses, ogc:sfOverlaps)
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  [index]
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  INPUT_FILES = ${data:NAME}.ttl.bz2
@@ -21,6 +21,7 @@ PARSER_BUFFER_SIZE = 100M
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  STXXL_MEMORY = 40G
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  SETTINGS_JSON = { "num-triples-per-batch": 10000000 }
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  ULIMIT = 10000
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+ ENCODE_AS_IDS = https://www.openstreetmap.org/node/ http://www.openstreetmap.org/node/ https://www.openstreetmap.org/way/ https://www.openstreetmap.org/relation/ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_node_tagged_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_node_untagged_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_way_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_relation_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_wayarea_ https://osm2rdf.cs.uni-freiburg.de/rdf/geom#osm_relationarea_ https://www.openstreetmap.org/changeset/
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  [server]
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  PORT = 7007
qlever/Qleverfiles/Qleverfile.uniprot CHANGED
@@ -12,7 +12,7 @@
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  [data]
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  NAME = uniprot
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- DATE = 2024-11-27
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+ DATE = 2025-06-18
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  RDFXML_DIR = rdf.${DATE}
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  TTL_DIR = ttl.${DATE}
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  UNIPROT_URL = https://ftp.uniprot.org/pub/databases/uniprot/current_release/rdf
@@ -56,6 +56,7 @@ MULTI_INPUT_JSON = [{ "cmd": "zcat {}", "graph": "http://sparql.uniprot.org/unip
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  { "cmd": "zcat ${data:TTL_DIR}/core.ttl.gz", "graph": "http://purl.uniprot.org/core" }]
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  SETTINGS_JSON = { "languages-internal": [], "prefixes-external": [""], "locale": { "language": "en", "country": "US", "ignore-punctuation": true }, "ascii-prefixes-only": true, "num-triples-per-batch": 25000000 }
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  STXXL_MEMORY = 60G
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+ ULIMIT = 10000
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  [server]
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  PORT = 7018
qlever/Qleverfiles/Qleverfile.wikipathways CHANGED
@@ -8,7 +8,7 @@
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  [data]
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  NAME = wikipathways
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- RELEASE = 20240810
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+ RELEASE = current
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  GET_DATA_URL = https://data.wikipathways.org/${RELEASE}/rdf
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  GET_DATA_CMD = wget -O wikipathways-rdf-void.ttl ${GET_DATA_URL}/wikipathways-rdf-void.ttl && \
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  wget ${GET_DATA_URL}/wikipathways-${RELEASE}-rdf-wp.zip && \