pyxetabase 3.1.0.dev24__py3-none-any.whl → 4.0.0.dev0__py3-none-any.whl

pyopencga/rest_clients/file_client.py

@@ -420,7 +420,7 @@ class File(_ParentRestClient):
             MICROARRAY_EXPRESSION_TWOCHANNELS_GENEPIX DATAMATRIX_EXPRESSION
             IDLIST IDLIST_RANKED ANNOTATION_GENEVSANNOTATION OTHER_NEWICK
             OTHER_BLAST OTHER_INTERACTION OTHER_GENOTYPE OTHER_PLINK OTHER_VCF
-            OTHER_PED VCF4 VARIANT ALIGNMENT COVERAGE SEQUENCE PEDIGREE
+            OTHER_PED VCF4 CVDB VARIANT ALIGNMENT COVERAGE SEQUENCE PEDIGREE
             REFERENCE_GENOME NONE UNKNOWN']
         :param str checksum: Expected MD5 file checksum.
         :param bool resource: Boolean field indicating whether the file is a

pyopencga/rest_clients/variant_operation_client.py

@@ -105,8 +105,7 @@ class VariantOperation(_ParentRestClient):
             in dry-run mode. In this mode, OpenCGA will validate that all
             parameters and prerequisites are correctly set for successful
             execution, but the job will not actually run.
-        :param str study: Study [[organization@]project:]study where study and
-            project can be either the ID or UUID.
+        :param str project: project.
         :param dict data: Parameters to configure a variant annotation
             extension.
         """

pyxetabase/rest_clients/file_client.py

@@ -420,7 +420,7 @@ class File(_ParentRestClient):
             MICROARRAY_EXPRESSION_TWOCHANNELS_GENEPIX DATAMATRIX_EXPRESSION
             IDLIST IDLIST_RANKED ANNOTATION_GENEVSANNOTATION OTHER_NEWICK
             OTHER_BLAST OTHER_INTERACTION OTHER_GENOTYPE OTHER_PLINK OTHER_VCF
-            OTHER_PED VCF4 VARIANT ALIGNMENT COVERAGE SEQUENCE PEDIGREE
+            OTHER_PED VCF4 CVDB VARIANT ALIGNMENT COVERAGE SEQUENCE PEDIGREE
             REFERENCE_GENOME NONE UNKNOWN']
         :param str checksum: Expected MD5 file checksum.
         :param bool resource: Boolean field indicating whether the file is a

pyxetabase/rest_clients/variant_operation_client.py

@@ -105,8 +105,7 @@ class VariantOperation(_ParentRestClient):
             in dry-run mode. In this mode, OpenCGA will validate that all
             parameters and prerequisites are correctly set for successful
             execution, but the job will not actually run.
-        :param str study: Study [[organization@]project:]study where study and
-            project can be either the ID or UUID.
+        :param str project: project.
         :param dict data: Parameters to configure a variant annotation
             extension.
         """

{pyxetabase-3.1.0.dev24.dist-info → pyxetabase-4.0.0.dev0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyxetabase
-Version: 3.1.0.dev24
+Version: 4.0.0.dev0
 Summary: A REST client for OpenCGA enterprise REST web services
 Author: Daniel Perez-Gil
 Author-email: daniel.perez@zettagenomics.com

{pyxetabase-3.1.0.dev24.dist-info → pyxetabase-4.0.0.dev0.dist-info}/RECORD

@@ -13,7 +13,7 @@ pyopencga/rest_clients/clinical_analysis_client.py,sha256=e14y-qJznmAIMsIVpdh2yn
 pyopencga/rest_clients/cohort_client.py,sha256=6HcNiUL3WVsLfRtcitwJuxyraECJ6RExV8GvE2oQhDM,16323
 pyopencga/rest_clients/disease_panel_client.py,sha256=dD5_nzetek5Hk2sSqT1JasdNu8ohkO3yMfdY76jGU8U,18512
 pyopencga/rest_clients/family_client.py,sha256=MC8WHfzycB7WeRqb8FZEt2YLFTNrdSnky-bHwsr-6uY,18585
-pyopencga/rest_clients/file_client.py,sha256=xoUE7e1oyaVhdO-ZnLEnbyUPTgyKGYhhtqXwvhkPP90,33724
+pyopencga/rest_clients/file_client.py,sha256=SnFrV6Bs-_ZMoZMoGviNMK1yi2xLXnTQCjm20ovecew,33729
 pyopencga/rest_clients/ga4gh_client.py,sha256=iU0PvOmxTbhFS-AUD6BDp41uU1BAxWJUiiv1waioX6A,3505
 pyopencga/rest_clients/individual_client.py,sha256=jYO4nHluP-gsdX7iM43qwlP9t9QIZBPiUv8sNXMOQ1Q,23224
 pyopencga/rest_clients/job_client.py,sha256=2u1fBSFb87gRsxcsF6ySQGgnKSJLCiaczrxUQ_iAesQ,19810
@@ -24,7 +24,7 @@ pyopencga/rest_clients/sample_client.py,sha256=UAUDzZCfIaSKCwaIGe11ek11w_tMcxGqN
 pyopencga/rest_clients/study_client.py,sha256=1ba7-zOxP6ZX_YLpKkzFsfBVBZk4rwRwVoZzzaMVPDo,21490
 pyopencga/rest_clients/user_client.py,sha256=XS4FDLuPaDt9VKHlLIYixvqqLRfBEZ9pwzblUM3GDfQ,7147
 pyopencga/rest_clients/variant_client.py,sha256=qao-KWLjp04mDN3q7tQYsJzsQpxMaMvMzE8zAp8t7pg,75435
-pyopencga/rest_clients/variant_operation_client.py,sha256=wcSyn9jEoHvWyXKucnnPz3uwge93DCbY5eZJ01D9eG8,38337
+pyopencga/rest_clients/variant_operation_client.py,sha256=Xcr5l1Sf-nJcPitEFUVS331eotgtQt1pgLK-RJqe2Vc,38245
 pyopencga/rest_clients/workflow_client.py,sha256=TN_x3CpC-GIojfsJNZmwPMCeXMUSPxKIas2PnNN18H4,12481
 pyxetabase/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 pyxetabase/commons.py,sha256=Okt5DgvSpZW9PUsxoLNpROb0BDrdr_zhgry4X3dQpfk,14308
@@ -43,7 +43,7 @@ pyxetabase/rest_clients/cvdb_client.py,sha256=V7ny5nQEeJqsbALAe7JLyoV6b0XyYF7c9l
 pyxetabase/rest_clients/disease_panel_client.py,sha256=GAYRyAfoB_VunskXOhAzMNbsrFupb6M2QbRK3x1Y5vo,18513
 pyxetabase/rest_clients/family_client.py,sha256=n-kyjnrV09R50JxyiHjFs8rCQkOKFU0Z1O7oVYuaKxg,18586
 pyxetabase/rest_clients/federation_client.py,sha256=p5B8dRq9gj-fdgIfIPhmkT7mNU65cRFtH06kaGtmbWE,5066
-pyxetabase/rest_clients/file_client.py,sha256=7mGziH-_IuHuhs7B2yOby3s969qHqDMNLAOpDdnE3J0,33725
+pyxetabase/rest_clients/file_client.py,sha256=fwTWnZtprYNDUBvRetLLe6PTBxW_M8LxN6OlAMGWXC4,33730
 pyxetabase/rest_clients/ga4gh_client.py,sha256=fPnmiblnfpz_zcZPJblGqOFksrdiF3MUer3fv2nwQwk,3506
 pyxetabase/rest_clients/individual_client.py,sha256=C59zr_t7tTxNR7ZBeAPY6fyYl59fE7KY05MaLyXWmXw,23225
 pyxetabase/rest_clients/job_client.py,sha256=amoBW3SL56l6sAPCUB55rZhLR8DcdIIfb5ymOZ9NkLQ,19811
@@ -54,10 +54,10 @@ pyxetabase/rest_clients/sample_client.py,sha256=VOsPAhw9HwaEHzzw_5gcVQ1v2xSesvzN
 pyxetabase/rest_clients/study_client.py,sha256=STtboEiGP-lQ1UptjHxk-ANd3uG6cA6U3srvOO4UQIE,21491
 pyxetabase/rest_clients/user_client.py,sha256=frA7-rMii-yoRyca_Orkj1T80OeEe-zCdWZCHKn1sio,7683
 pyxetabase/rest_clients/variant_client.py,sha256=mmBuVE0JBThJr5zsLGci5nykNcCKyfZXRKl-h3HT9PA,75436
-pyxetabase/rest_clients/variant_operation_client.py,sha256=U2L1pNJhD1cpG-QzoUOD7-D5J_yYK9YYIoOcbPP-f3s,38338
+pyxetabase/rest_clients/variant_operation_client.py,sha256=z_9qEpZEoHF8lLfBq-i3wROnoiNjPjBavqPBepiTIyk,38246
 pyxetabase/rest_clients/workflow_client.py,sha256=QYnyI17aNCjq-uXlguaSj78F0xupeWwmf8uYK1Y5tf4,12482
-pyxetabase-3.1.0.dev24.dist-info/licenses/LICENSE,sha256=z8d0m5b2O9McPEK1xHG_dWgUBT6EfBDz6wA0F7xSPTA,11358
-pyxetabase-3.1.0.dev24.dist-info/METADATA,sha256=dd_6biLYdVjBwPw9XeCNBcguTMXJs6Om922GmmA6CaM,5540
-pyxetabase-3.1.0.dev24.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-pyxetabase-3.1.0.dev24.dist-info/top_level.txt,sha256=0m5pDpBX-lM8QpPl7bTpTQAm4kgu2-nr-pcaEu4Tn_8,11
-pyxetabase-3.1.0.dev24.dist-info/RECORD,,
+pyxetabase-4.0.0.dev0.dist-info/licenses/LICENSE,sha256=z8d0m5b2O9McPEK1xHG_dWgUBT6EfBDz6wA0F7xSPTA,11358
+pyxetabase-4.0.0.dev0.dist-info/METADATA,sha256=o-VtZAPy4QPUOhwyfof54Uj1aG73tPOmHWn3Ucc2aZM,5539
+pyxetabase-4.0.0.dev0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+pyxetabase-4.0.0.dev0.dist-info/top_level.txt,sha256=0m5pDpBX-lM8QpPl7bTpTQAm4kgu2-nr-pcaEu4Tn_8,11
+pyxetabase-4.0.0.dev0.dist-info/RECORD,,