pyxetabase 3.1.0.dev23__py3-none-any.whl → 3.1.0.dev25__py3-none-any.whl

pyopencga/rest_clients/variant_operation_client.py

@@ -86,6 +86,33 @@ class VariantOperation(_ParentRestClient):
 
         return self._delete(category='operation', resource='delete', subcategory='variant/annotation', **options)
 
+    def variant_annotation_extension_configure(self, data=None, **options):
+        """
+        Install a variant annotation extension and configure the project to
+            use it.
+        PATH: /{apiVersion}/operation/variant/annotation/extension/configure
+
+        :param str job_id: Job ID. It must be a unique string within the
+            study. An ID will be autogenerated automatically if not provided.
+        :param str job_description: Job description.
+        :param str job_depends_on: Comma separated list of existing job IDs
+            the job will depend on.
+        :param str job_tags: Job tags.
+        :param str job_scheduled_start_time: Time when the job is scheduled to
+            start.
+        :param str job_priority: Priority of the job.
+        :param bool job_dry_run: Flag indicating that the job will be executed
+            in dry-run mode. In this mode, OpenCGA will validate that all
+            parameters and prerequisites are correctly set for successful
+            execution, but the job will not actually run.
+        :param str study: Study [[organization@]project:]study where study and
+            project can be either the ID or UUID.
+        :param dict data: Parameters to configure a variant annotation
+            extension.
+        """
+
+        return self._post(category='operation', resource='configure', subcategory='variant/annotation/extension', data=data, **options)
+
     def index_variant_annotation(self, data=None, **options):
         """
         Create and load variant annotations into the database.

pyxetabase/rest_clients/variant_operation_client.py

@@ -86,6 +86,33 @@ class VariantOperation(_ParentRestClient):
 
         return self._delete(category='operation', resource='delete', subcategory='variant/annotation', **options)
 
+    def variant_annotation_extension_configure(self, data=None, **options):
+        """
+        Install a variant annotation extension and configure the project to
+            use it.
+        PATH: /{apiVersion}/operation/variant/annotation/extension/configure
+
+        :param str job_id: Job ID. It must be a unique string within the
+            study. An ID will be autogenerated automatically if not provided.
+        :param str job_description: Job description.
+        :param str job_depends_on: Comma separated list of existing job IDs
+            the job will depend on.
+        :param str job_tags: Job tags.
+        :param str job_scheduled_start_time: Time when the job is scheduled to
+            start.
+        :param str job_priority: Priority of the job.
+        :param bool job_dry_run: Flag indicating that the job will be executed
+            in dry-run mode. In this mode, OpenCGA will validate that all
+            parameters and prerequisites are correctly set for successful
+            execution, but the job will not actually run.
+        :param str study: Study [[organization@]project:]study where study and
+            project can be either the ID or UUID.
+        :param dict data: Parameters to configure a variant annotation
+            extension.
+        """
+
+        return self._post(category='operation', resource='configure', subcategory='variant/annotation/extension', data=data, **options)
+
     def index_variant_annotation(self, data=None, **options):
         """
         Create and load variant annotations into the database.

{pyxetabase-3.1.0.dev23.dist-info → pyxetabase-3.1.0.dev25.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyxetabase
-Version: 3.1.0.dev23
+Version: 3.1.0.dev25
 Summary: A REST client for OpenCGA enterprise REST web services
 Author: Daniel Perez-Gil
 Author-email: daniel.perez@zettagenomics.com

{pyxetabase-3.1.0.dev23.dist-info → pyxetabase-3.1.0.dev25.dist-info}/RECORD

@@ -24,7 +24,7 @@ pyopencga/rest_clients/sample_client.py,sha256=UAUDzZCfIaSKCwaIGe11ek11w_tMcxGqN
 pyopencga/rest_clients/study_client.py,sha256=1ba7-zOxP6ZX_YLpKkzFsfBVBZk4rwRwVoZzzaMVPDo,21490
 pyopencga/rest_clients/user_client.py,sha256=XS4FDLuPaDt9VKHlLIYixvqqLRfBEZ9pwzblUM3GDfQ,7147
 pyopencga/rest_clients/variant_client.py,sha256=qao-KWLjp04mDN3q7tQYsJzsQpxMaMvMzE8zAp8t7pg,75435
-pyopencga/rest_clients/variant_operation_client.py,sha256=HYBQOSwXKdFTDbaxZfA4hUa66yKCfwCT7r272hLdQLc,36910
+pyopencga/rest_clients/variant_operation_client.py,sha256=wcSyn9jEoHvWyXKucnnPz3uwge93DCbY5eZJ01D9eG8,38337
 pyopencga/rest_clients/workflow_client.py,sha256=TN_x3CpC-GIojfsJNZmwPMCeXMUSPxKIas2PnNN18H4,12481
 pyxetabase/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 pyxetabase/commons.py,sha256=Okt5DgvSpZW9PUsxoLNpROb0BDrdr_zhgry4X3dQpfk,14308
@@ -54,10 +54,10 @@ pyxetabase/rest_clients/sample_client.py,sha256=VOsPAhw9HwaEHzzw_5gcVQ1v2xSesvzN
 pyxetabase/rest_clients/study_client.py,sha256=STtboEiGP-lQ1UptjHxk-ANd3uG6cA6U3srvOO4UQIE,21491
 pyxetabase/rest_clients/user_client.py,sha256=frA7-rMii-yoRyca_Orkj1T80OeEe-zCdWZCHKn1sio,7683
 pyxetabase/rest_clients/variant_client.py,sha256=mmBuVE0JBThJr5zsLGci5nykNcCKyfZXRKl-h3HT9PA,75436
-pyxetabase/rest_clients/variant_operation_client.py,sha256=oN7AEQzAkrmLQLbw86CODCEnR5xM6UkqrdN-9WPO_rM,36911
+pyxetabase/rest_clients/variant_operation_client.py,sha256=U2L1pNJhD1cpG-QzoUOD7-D5J_yYK9YYIoOcbPP-f3s,38338
 pyxetabase/rest_clients/workflow_client.py,sha256=QYnyI17aNCjq-uXlguaSj78F0xupeWwmf8uYK1Y5tf4,12482
-pyxetabase-3.1.0.dev23.dist-info/licenses/LICENSE,sha256=z8d0m5b2O9McPEK1xHG_dWgUBT6EfBDz6wA0F7xSPTA,11358
-pyxetabase-3.1.0.dev23.dist-info/METADATA,sha256=tqFdL8jRI_LDEPlN6dw-CWIohbj2y0PYr5EQn0aa5Rs,5540
-pyxetabase-3.1.0.dev23.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-pyxetabase-3.1.0.dev23.dist-info/top_level.txt,sha256=0m5pDpBX-lM8QpPl7bTpTQAm4kgu2-nr-pcaEu4Tn_8,11
-pyxetabase-3.1.0.dev23.dist-info/RECORD,,
+pyxetabase-3.1.0.dev25.dist-info/licenses/LICENSE,sha256=z8d0m5b2O9McPEK1xHG_dWgUBT6EfBDz6wA0F7xSPTA,11358
+pyxetabase-3.1.0.dev25.dist-info/METADATA,sha256=9cR7ZQh759gvQrRnYICqEeAEKgjaF_B09Mq28iMgf5I,5540
+pyxetabase-3.1.0.dev25.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+pyxetabase-3.1.0.dev25.dist-info/top_level.txt,sha256=0m5pDpBX-lM8QpPl7bTpTQAm4kgu2-nr-pcaEu4Tn_8,11
+pyxetabase-3.1.0.dev25.dist-info/RECORD,,