pyreduce-astro 0.7a2__cp313-cp313-win_amd64.whl → 0.7a4__cp313-cp313-win_amd64.whl

pyreduce/__main__.py

@@ -11,11 +11,6 @@ Usage:
 
 import click
 
-from . import datasets
-from .configuration import get_configuration_for_instrument
-from .reduce import main as reduce_main
-from .tools.combine import combine as tools_combine
-
 ALL_STEPS = (
     "bias",
     "flat",
@@ -89,6 +84,9 @@ def run(
     INSTRUMENT: Name of the instrument (e.g., UVES, HARPS, XSHOOTER)
     TARGET: Target star name or regex pattern
     """
+    from .configuration import get_configuration_for_instrument
+    from .reduce import main as reduce_main
+
     # Parse steps
     if steps:
         steps = tuple(s.strip() for s in steps.split(","))
@@ -128,6 +126,8 @@ def combine(files, output, plot):
 
     FILES: Input .final.fits files to combine
     """
+    from .tools.combine import combine as tools_combine
+
     tools_combine(list(files), output, plot=plot)
 
 
@@ -138,6 +138,8 @@ def download(instrument):
 
     INSTRUMENT: Name of the instrument (e.g., UVES, HARPS)
     """
+    from . import datasets
+
     instrument = instrument.upper()
     dataset_func = getattr(datasets, instrument, None)
     if dataset_func is None:
@@ -153,6 +155,117 @@ def download(instrument):
     click.echo(f"Dataset downloaded to: {path}")
 
 
+@cli.command()
+@click.argument("filename", required=False)
+@click.option(
+    "--list", "-l", "list_examples", is_flag=True, help="List available examples"
+)
+@click.option("--all", "-a", "download_all", is_flag=True, help="Download all examples")
+@click.option("--run", "-r", is_flag=True, help="Run the example after downloading")
+@click.option("--output", "-o", default=".", help="Output directory")
+def examples(filename, list_examples, download_all, run, output):
+    """List, download, or run example scripts from GitHub.
+
+    Downloads examples matching your installed PyReduce version.
+
+    \b
+    Examples:
+        reduce examples                     # List available examples
+        reduce examples uves_example.py     # Download to current dir
+        reduce examples -r uves_example.py  # Download and run
+        reduce examples --all -o ~/scripts  # Download all to ~/scripts
+    """
+    import json
+    import os
+    import subprocess
+    import sys
+    import tempfile
+    import urllib.request
+    from urllib.error import HTTPError
+
+    from pyreduce import __version__
+
+    version = __version__.split("+")[0]
+    if version == "unknown":
+        raise click.ClickException(
+            "Cannot determine package version. Install from PyPI or a tagged release."
+        )
+
+    github_api = (
+        f"https://api.github.com/repos/ivh/PyReduce/contents/examples?ref=v{version}"
+    )
+    github_raw = f"https://raw.githubusercontent.com/ivh/PyReduce/v{version}/examples"
+
+    # Fetch list of examples from GitHub API
+    try:
+        with urllib.request.urlopen(github_api) as resp:
+            contents = json.loads(resp.read().decode())
+    except HTTPError as e:
+        if e.code == 404:
+            raise click.ClickException(
+                f"Tag v{version} not found on GitHub. "
+                "Try installing a released version."
+            ) from None
+        raise click.ClickException(f"GitHub API error: {e}") from None
+
+    example_files = sorted(f["name"] for f in contents if f["name"].endswith(".py"))
+
+    # List mode
+    if list_examples or (not filename and not download_all):
+        click.echo(f"Available examples for v{version}:")
+        for name in example_files:
+            click.echo(f"  {name}")
+        return
+
+    if run and download_all:
+        raise click.ClickException("Cannot use --run with --all")
+
+    # Run mode: download to temp and execute
+    if run:
+        if filename not in example_files:
+            raise click.ClickException(
+                f"Unknown example '{filename}'. Use 'reduce examples --list' to see available."
+            )
+        url = f"{github_raw}/{filename}"
+        with tempfile.NamedTemporaryFile(mode="w", suffix=".py", delete=False) as f:
+            try:
+                with urllib.request.urlopen(url) as resp:
+                    f.write(resp.read().decode())
+                temp_path = f.name
+            except HTTPError as e:
+                raise click.ClickException(
+                    f"Failed to download {filename}: {e}"
+                ) from None
+        try:
+            click.echo(f"Running {filename}...")
+            result = subprocess.run([sys.executable, temp_path], check=False)
+            sys.exit(result.returncode)
+        finally:
+            os.unlink(temp_path)
+
+    # Ensure output directory exists
+    os.makedirs(output, exist_ok=True)
+
+    def download_file(name):
+        url = f"{github_raw}/{name}"
+        dest = os.path.join(output, name)
+        try:
+            urllib.request.urlretrieve(url, dest)
+            click.echo(f"Downloaded: {dest}")
+        except HTTPError as e:
+            click.echo(f"Failed to download {name}: {e}", err=True)
+
+    if download_all:
+        for name in example_files:
+            download_file(name)
+    else:
+        if filename not in example_files:
+            raise click.ClickException(
+                f"Unknown example '{filename}'. Use 'reduce examples --list' to see available."
+            )
+        download_file(filename)
+
+
 @cli.command("list-steps")
 def list_steps():
     """List all available reduction steps."""
@@ -174,6 +287,9 @@ def make_step_command(step_name):
     @click.option("--output-dir", "-o", default="reduced", help="Output directory")
     @click.option("--plot", "-p", default=0, help="Plot level")
     def cmd(instrument, target, night, arm, base_dir, input_dir, output_dir, plot):
+        from .configuration import get_configuration_for_instrument
+        from .reduce import main as reduce_main
+
         config = get_configuration_for_instrument(instrument)
         reduce_main(
             instrument=instrument,

{pyreduce_astro-0.7a2.dist-info → pyreduce_astro-0.7a4.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pyreduce-astro
-Version: 0.7a2
+Version: 0.7a4
 Summary: A data reduction package for echelle spectrographs
 Project-URL: Homepage, https://github.com/ivh/PyReduce
 Project-URL: Documentation, https://pyreduce-astro.readthedocs.io

{pyreduce_astro-0.7a2.dist-info → pyreduce_astro-0.7a4.dist-info}/RECORD

@@ -1,5 +1,5 @@
 pyreduce/__init__.py,sha256=e_576KbKh0jALuzvpI-VLeILhtQYJAPTDD0XMb189gM,1797
-pyreduce/__main__.py,sha256=z7iW2lyo5HOp-r7GyIiwBksRCVdO2UHDMDVEdNuHQgY,5625
+pyreduce/__main__.py,sha256=KV5z5kqydHKMtTQ_LNEdQs8xtBmyFcOqY5cpOwtVrEg,9885
 pyreduce/cli.py,sha256=w8k5OticZ8rzh5JshYv3MBp_Sx0PtECiSOdR3VboNB0,10937
 pyreduce/clipnflip.py,sha256=S-9CaTfRwPHWJUq92Iv2K1T-4Oe6MmROJQpzv2cMaOI,5704
 pyreduce/combine_frames.py,sha256=VnvLXexXisunuZ05whbhzSemoahQ6pd7cOoz8Uz_fWU,30407
@@ -19,12 +19,12 @@ pyreduce/trace.py,sha256=VAl6sgjmfYmfNLsddzwx_f4x-oT3KsGiUfhHMoHNGxM,33667
 pyreduce/util.py,sha256=MpyEpjOzvINBx1ixMWaF7huYZ7GylDOXMdR0Va6ljUI,40870
 pyreduce/wavelength_calibration.py,sha256=1BT6KfAd7sIabQEb2D0n3511p3IY03G5pvGiB3j9e1E,70592
 pyreduce/clib/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-pyreduce/clib/_slitfunc_2d.cp311-win_amd64.pyd,sha256=-h4Z4Atluvem7d6Pv0DrfrXg2kXy65gNqJt5fEejcKk,35328
-pyreduce/clib/_slitfunc_2d.cp312-win_amd64.pyd,sha256=1fIf9DxkbV4vHRS85VUB-WxNtYUkBS4YHdxDRAv0W00,35328
-pyreduce/clib/_slitfunc_2d.cp313-win_amd64.pyd,sha256=KJeGQ0LX3iq7ji_Cf96UP_hfsua1Ff1bVE29Qr6fask,35328
-pyreduce/clib/_slitfunc_bd.cp311-win_amd64.pyd,sha256=iHJ6rD9rRzlQpX9LtvVLF2Ge3jINTImLlI_iEAsy32U,25600
-pyreduce/clib/_slitfunc_bd.cp312-win_amd64.pyd,sha256=RXwz73aVSoxmf7VS8nVwzEhaVY23DVMGF8Kf2Kvksdg,25600
-pyreduce/clib/_slitfunc_bd.cp313-win_amd64.pyd,sha256=-TtXOvH7t8ps4bHQRv7-XK_PoXFuKBYgcS5hcplcpnU,25600
+pyreduce/clib/_slitfunc_2d.cp311-win_amd64.pyd,sha256=_7iPNwZZMAdA2UWggpT8tEK19y8nbeLIvXu43mEX3h4,35328
+pyreduce/clib/_slitfunc_2d.cp312-win_amd64.pyd,sha256=NP-C2mXnABORwotN58gu6vN_c1QmH1v3GgWsXrd-x8I,35328
+pyreduce/clib/_slitfunc_2d.cp313-win_amd64.pyd,sha256=zu6iCAIt6OAOqNgI1KMaSf9rTIADwkhlU-Mkt8-tO5c,35328
+pyreduce/clib/_slitfunc_bd.cp311-win_amd64.pyd,sha256=rMif07DHX2oNN131Q7tqYWiLmpZiTUweBWfFU7wU7s8,25600
+pyreduce/clib/_slitfunc_bd.cp312-win_amd64.pyd,sha256=MRhnTTKWiGhFnLgt2FS_pTbrvzGupK9sZTgTQv7oLiU,25600
+pyreduce/clib/_slitfunc_bd.cp313-win_amd64.pyd,sha256=dqLb2--YnzFtSpMatJgYGBHs0L0WlRKZGbDVWZ22WqA,25600
 pyreduce/clib/build_extract.py,sha256=WTEpyRZWDR4AUkT1mkxmsWbXuRLG2jrRbJC5M8MKi3M,2020
 pyreduce/clib/slit_func_2d_xi_zeta_bd.c,sha256=o_R_3hq0tX2ZdaCRxJjY2mXQf4RaYENcVKVn2OZR_Rk,51279
 pyreduce/clib/slit_func_2d_xi_zeta_bd.h,sha256=ezWP3JXfbviCN5FAbB9AJYB1YnAGFhsO5N3wCt-rbmU,1567
@@ -36,14 +36,14 @@ pyreduce/clib/Release/_slitfunc_2d.cp312-win_amd64.exp,sha256=ap2hnA20RvdJAV-jrp
 pyreduce/clib/Release/_slitfunc_2d.cp312-win_amd64.lib,sha256=cD10d0NBKuPxsmHfYZ17F9O6tt2X3vwfHv49fx7i7mg,2104
 pyreduce/clib/Release/_slitfunc_2d.cp313-win_amd64.exp,sha256=xgcXydyjVF48BY3DHEU9l-3BIMHBtYVXENVCXG6mpHg,763
 pyreduce/clib/Release/_slitfunc_2d.cp313-win_amd64.lib,sha256=HtsGowOnstUvTx3wEiX3JcFgOzCsrie-6B5pdb69EVc,2104
-pyreduce/clib/Release/_slitfunc_2d.obj,sha256=pZqO9n3WDBfT6_gQFyJWt3zrDFwgDcIxd-kMGI0Tawo,225492
+pyreduce/clib/Release/_slitfunc_2d.obj,sha256=HibN_mMVM9-_lX2oHaZIjmgpL6VCrRNmJ2qZwTexVDI,225492
 pyreduce/clib/Release/_slitfunc_bd.cp311-win_amd64.exp,sha256=vHZNO5hq4YBqgpgWXOW7wELiB-Pex2QFRvKbLH-vIYY,763
 pyreduce/clib/Release/_slitfunc_bd.cp311-win_amd64.lib,sha256=hcG-cWafgtz6nNO12lFFtkVLhVAsQyuCpPD78rfPQzs,2104
 pyreduce/clib/Release/_slitfunc_bd.cp312-win_amd64.exp,sha256=BWCVspYP1T2q5yNWlVpCfK6JWR44RuNiFhWW3H6kNLc,763
 pyreduce/clib/Release/_slitfunc_bd.cp312-win_amd64.lib,sha256=tJ-lz6MJn-UOdBfx7yFQqrNw4NEmKinrbm8vx2PSkzE,2104
 pyreduce/clib/Release/_slitfunc_bd.cp313-win_amd64.exp,sha256=v6YBEY_vzeHqhCMqQ7-ISyMP3m07qeSL4yA-Lq27vP8,763
 pyreduce/clib/Release/_slitfunc_bd.cp313-win_amd64.lib,sha256=R3sT-Vy8AWGitwFDqYI3ipcc86PVkyMgACcDMXMkA1U,2104
-pyreduce/clib/Release/_slitfunc_bd.obj,sha256=Y2BGH1xNSeftQXQr11ky8H7MHK_YIGNvwaU3pAo6uCM,175839
+pyreduce/clib/Release/_slitfunc_bd.obj,sha256=kAcPgomQLBVkwA0S__Vbhk7LUk0QH9vf1vKTxDGpmOk,175839
 pyreduce/instruments/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 pyreduce/instruments/aj.py,sha256=QSKo2IUvBugBRJF0Qr6T9GueBzeDrA4yGu-qAe7TZwg,155
 pyreduce/instruments/aj.yaml,sha256=peeQ2ZqvqemHWpNZoiXEscU6ZIzAImbhN_8D0XTeeME,904
@@ -169,8 +169,8 @@ pyreduce/wavecal/xshooter_nir.npz,sha256=0Fu5wxWutc8072n8Hk2AZAWSlyT4WdhJuhh0OzU
 pyreduce/wavecal/atlas/thar.fits,sha256=nPPNStZ281iPUNsOXu3YJfHNlnHBd1CWMLwTuZL8vvo,1529218
 pyreduce/wavecal/atlas/thar_list.txt,sha256=saK3YW1slxlXGeulZDdILWf952XOWToJcUULVSHMe6k,63515
 pyreduce/wavecal/atlas/une.fits,sha256=egHlchdM4AN9MSksEI5MlHkmB3g1G1VhEdzhUG3XU8I,2949057
-pyreduce_astro-0.7a2.dist-info/METADATA,sha256=MxuR7E_uOtsoXRY5jKe-nCwYPrhZflmbr7lKxul4_lc,3488
-pyreduce_astro-0.7a2.dist-info/WHEEL,sha256=PCIhMO61Z-RaGBFeYB07NemkwSKK2UsOquwuNeClEpE,97
-pyreduce_astro-0.7a2.dist-info/entry_points.txt,sha256=n045jK9XZFfdmasTNhriefYyJoY77JKm-RpRD1zgHZo,50
-pyreduce_astro-0.7a2.dist-info/licenses/LICENSE,sha256=IwGE9guuL-ryRPEKi6wFPI_zOhg7zDZbTYuHbSt_SAk,35823
-pyreduce_astro-0.7a2.dist-info/RECORD,,
+pyreduce_astro-0.7a4.dist-info/METADATA,sha256=m5uMEQvbv9ra-r9T136x5VpNUTfJ0pDjfz0oGCoriTY,3488
+pyreduce_astro-0.7a4.dist-info/WHEEL,sha256=PCIhMO61Z-RaGBFeYB07NemkwSKK2UsOquwuNeClEpE,97
+pyreduce_astro-0.7a4.dist-info/entry_points.txt,sha256=n045jK9XZFfdmasTNhriefYyJoY77JKm-RpRD1zgHZo,50
+pyreduce_astro-0.7a4.dist-info/licenses/LICENSE,sha256=IwGE9guuL-ryRPEKi6wFPI_zOhg7zDZbTYuHbSt_SAk,35823
+pyreduce_astro-0.7a4.dist-info/RECORD,,